FF:10562-108A4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005240 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008009;DRR008881;DRZ000306;DRZ001691;DRZ011656;DRZ013041 | ||
|ancestors_in_disease_facet=DOID:0050615,DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002048,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004802,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0005178,UBERON:0000072,UBERON:0005177,UBERON:0004807,UBERON:0000117,UBERON:0000171,UBERON:0000115,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000082,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:0050615,DOID:162,DOID:14566,DOID:0050687,DOID:1324,DOID:305,DOID:1325,DOID:3905,DOID:5409,DOID:3904 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0100353,FF:0102061,FF:0101120,FF:0100762,FF:0102206,FF:0100189 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100353,FF:0101120 | |fonse_cell_line=FF:0100353,FF:0101120 | ||
|fonse_cell_line_closure=FF:0100353,FF:0101120 | |fonse_cell_line_closure=FF:0100353,FF:0101120 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/small%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aWA-hT.CNhs11812.10562-108A4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/small%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aWA-hT.CNhs11812.10562-108A4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/small%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aWA-hT.CNhs11812.10562-108A4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/small%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aWA-hT.CNhs11812.10562-108A4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/small%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aWA-hT.CNhs11812.10562-108A4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10562-108A4 | |id=FF:10562-108A4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0100189;;FF:0102206 | ||
|is_obsolete= | |||
|library_id=CNhs11812 | |||
|library_id_phase_based=2:CNhs11812 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10562 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10562 | |||
|name=small cell lung carcinoma cell line:WA-hT | |name=small cell lung carcinoma cell line:WA-hT | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11812,LSID829,release010,COMPLETED | |profile_hcage=CNhs11812,LSID829,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=108 | |rna_box=108 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=160.9846 | |rna_weight_ug=160.9846 | ||
|sample_age=56 | |sample_age=56 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB2279 | |sample_cell_catalog=RCB2279 | ||
|sample_cell_line=WA-hT | |sample_cell_line=WA-hT | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.43791601966356e-249!GO:0043226;organelle;1.89350172510339e-209!GO:0043229;intracellular organelle;7.16931813703898e-209!GO:0043227;membrane-bound organelle;6.89364805459618e-205!GO:0043231;intracellular membrane-bound organelle;6.98799958322136e-205!GO:0005737;cytoplasm;1.73321109604092e-160!GO:0044422;organelle part;1.2188575160319e-140!GO:0044446;intracellular organelle part;3.62677267406577e-139!GO:0044444;cytoplasmic part;9.40962534046393e-108!GO:0005634;nucleus;5.55842223906438e-95!GO:0032991;macromolecular complex;5.39634112305394e-87!GO:0044237;cellular metabolic process;1.90150728646134e-79!GO:0044238;primary metabolic process;2.60897276053811e-77!GO:0044428;nuclear part;1.54583884815831e-73!GO:0043170;macromolecule metabolic process;1.01297030071877e-72!GO:0003723;RNA binding;6.95334693562075e-69!GO:0030529;ribonucleoprotein complex;3.03607728529432e-66!GO:0043233;organelle lumen;7.64919330523989e-63!GO:0031974;membrane-enclosed lumen;7.64919330523989e-63!GO:0005515;protein binding;1.08737974179911e-59!GO:0005739;mitochondrion;8.91416452606809e-55!GO:0043283;biopolymer metabolic process;2.42374502103844e-51!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.25831628471953e-49!GO:0043234;protein complex;5.54694437541418e-46!GO:0031090;organelle membrane;7.12126832441451e-44!GO:0016043;cellular component organization and biogenesis;2.09479919808148e-43!GO:0006396;RNA processing;2.45028013417124e-42!GO:0010467;gene expression;3.62321220371673e-41!GO:0031981;nuclear lumen;2.52895995732232e-40!GO:0015031;protein transport;6.68184851667462e-40!GO:0006259;DNA metabolic process;9.26076181007145e-39!GO:0033036;macromolecule localization;4.47639074446042e-38!GO:0016071;mRNA metabolic process;8.79520786882604e-38!GO:0043228;non-membrane-bound organelle;1.93889086439969e-36!GO:0043232;intracellular non-membrane-bound organelle;1.93889086439969e-36!GO:0044429;mitochondrial part;2.43224783548401e-36!GO:0005840;ribosome;7.82366778326833e-36!GO:0031967;organelle envelope;3.07543475622815e-35!GO:0045184;establishment of protein localization;4.76266479141305e-35!GO:0031975;envelope;6.08155284760691e-35!GO:0006996;organelle organization and biogenesis;9.39967640909012e-35!GO:0008104;protein localization;1.94572499694196e-34!GO:0019538;protein metabolic process;2.05625324321605e-32!GO:0008380;RNA splicing;2.05625324321605e-32!GO:0003676;nucleic acid binding;2.23012894529688e-32!GO:0006397;mRNA processing;2.70121283481741e-32!GO:0046907;intracellular transport;4.5260043976627e-32!GO:0006412;translation;4.53309423336904e-32!GO:0003735;structural constituent of ribosome;4.96992065453714e-30!GO:0065003;macromolecular complex assembly;2.45903355410829e-29!GO:0007049;cell cycle;3.01693360227814e-29!GO:0044267;cellular protein metabolic process;9.32710766809367e-29!GO:0044260;cellular macromolecule metabolic process;3.40979675281233e-28!GO:0000166;nucleotide binding;2.47379801541969e-27!GO:0033279;ribosomal subunit;2.61186527266086e-27!GO:0009058;biosynthetic process;6.57763942744454e-27!GO:0051649;establishment of cellular localization;2.27573794316067e-26!GO:0005654;nucleoplasm;2.36769885812557e-26!GO:0044249;cellular biosynthetic process;6.03413381920653e-26!GO:0022607;cellular component assembly;1.34369623882396e-25!GO:0051641;cellular localization;2.11881809703502e-25!GO:0005829;cytosol;5.26817868222268e-25!GO:0005694;chromosome;7.07495103609923e-25!GO:0006886;intracellular protein transport;3.11562256123874e-24!GO:0006974;response to DNA damage stimulus;7.02019941173019e-24!GO:0009059;macromolecule biosynthetic process;1.51974530902991e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.12647892565555e-23!GO:0005740;mitochondrial envelope;3.63887427457422e-23!GO:0016070;RNA metabolic process;8.71266926244552e-23!GO:0044427;chromosomal part;1.06121015555097e-22!GO:0019866;organelle inner membrane;1.19147742785534e-22!GO:0044451;nucleoplasm part;4.30447846229056e-22!GO:0031966;mitochondrial membrane;1.06341979008582e-21!GO:0005681;spliceosome;1.32480756411537e-21!GO:0022402;cell cycle process;2.55360415876035e-21!GO:0032553;ribonucleotide binding;1.18392903760549e-20!GO:0032555;purine ribonucleotide binding;1.18392903760549e-20!GO:0006119;oxidative phosphorylation;1.40392828363849e-20!GO:0012505;endomembrane system;1.86310424142222e-20!GO:0005743;mitochondrial inner membrane;2.52546003160518e-20!GO:0051276;chromosome organization and biogenesis;3.03321050641509e-20!GO:0006281;DNA repair;4.69990553720866e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.41783651116613e-20!GO:0016462;pyrophosphatase activity;8.6065433516325e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.10345212060349e-19!GO:0000278;mitotic cell cycle;1.15254323407243e-19!GO:0017111;nucleoside-triphosphatase activity;1.54105454104028e-19!GO:0017076;purine nucleotide binding;5.58108303599919e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.64300879805205e-18!GO:0016874;ligase activity;3.04172131328925e-18!GO:0022403;cell cycle phase;6.72915563184826e-18!GO:0006512;ubiquitin cycle;7.79499952046734e-18!GO:0006260;DNA replication;1.18722676029629e-17!GO:0044455;mitochondrial membrane part;5.10739076146542e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;7.72283460611789e-17!GO:0019941;modification-dependent protein catabolic process;1.46684351823563e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.46684351823563e-16!GO:0044265;cellular macromolecule catabolic process;2.69549581439253e-16!GO:0044257;cellular protein catabolic process;3.55375953719124e-16!GO:0006511;ubiquitin-dependent protein catabolic process;3.75952450574319e-16!GO:0031980;mitochondrial lumen;5.92923159597159e-16!GO:0005759;mitochondrial matrix;5.92923159597159e-16!GO:0006457;protein folding;7.26112198305598e-16!GO:0005524;ATP binding;7.40873861614075e-16!GO:0008134;transcription factor binding;1.00125490470383e-15!GO:0032559;adenyl ribonucleotide binding;1.4114504765518e-15!GO:0022618;protein-RNA complex assembly;1.54023570186965e-15!GO:0000087;M phase of mitotic cell cycle;2.01565498754678e-15!GO:0007067;mitosis;3.49269697767743e-15!GO:0005746;mitochondrial respiratory chain;3.80465435035225e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;5.40036827217979e-15!GO:0015935;small ribosomal subunit;6.09969880634293e-15!GO:0000279;M phase;9.66856730655064e-15!GO:0044445;cytosolic part;1.63199399638226e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.06816188036496e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.38248256862075e-14!GO:0006323;DNA packaging;2.75113557395417e-14!GO:0009719;response to endogenous stimulus;3.62114145998719e-14!GO:0050136;NADH dehydrogenase (quinone) activity;6.00186639106105e-14!GO:0003954;NADH dehydrogenase activity;6.00186639106105e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.00186639106105e-14!GO:0030554;adenyl nucleotide binding;7.00042050564101e-14!GO:0005783;endoplasmic reticulum;9.84328513648932e-14!GO:0044432;endoplasmic reticulum part;1.55404518055032e-13!GO:0008135;translation factor activity, nucleic acid binding;1.57565184482431e-13!GO:0015934;large ribosomal subunit;1.57565184482431e-13!GO:0043285;biopolymer catabolic process;1.87924863844509e-13!GO:0048770;pigment granule;1.97735178654296e-13!GO:0042470;melanosome;1.97735178654296e-13!GO:0005730;nucleolus;3.2735109234389e-13!GO:0051082;unfolded protein binding;3.70552621183657e-13!GO:0051301;cell division;4.08986167431042e-13!GO:0015630;microtubule cytoskeleton;4.2783886999025e-13!GO:0030163;protein catabolic process;4.31234306649763e-13!GO:0005635;nuclear envelope;4.64801444011568e-13!GO:0009057;macromolecule catabolic process;7.64203422699442e-13!GO:0005794;Golgi apparatus;8.03023316161103e-13!GO:0016192;vesicle-mediated transport;8.61117775870353e-13!GO:0031965;nuclear membrane;8.63078097799435e-13!GO:0044248;cellular catabolic process;1.02255629513963e-12!GO:0016604;nuclear body;3.05824281022605e-12!GO:0006333;chromatin assembly or disassembly;4.98116682854407e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;5.66092963966052e-12!GO:0000375;RNA splicing, via transesterification reactions;5.66092963966052e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.66092963966052e-12!GO:0043412;biopolymer modification;8.34058545646876e-12!GO:0030964;NADH dehydrogenase complex (quinone);9.78702599803115e-12!GO:0045271;respiratory chain complex I;9.78702599803115e-12!GO:0005747;mitochondrial respiratory chain complex I;9.78702599803115e-12!GO:0005761;mitochondrial ribosome;1.06203749254742e-11!GO:0000313;organellar ribosome;1.06203749254742e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.23779960294481e-11!GO:0042773;ATP synthesis coupled electron transport;1.23779960294481e-11!GO:0048193;Golgi vesicle transport;1.54848903997834e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.14947443465112e-11!GO:0016887;ATPase activity;2.67785198063463e-11!GO:0044453;nuclear membrane part;3.17596357367911e-11!GO:0000785;chromatin;4.28476768318575e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.79781882618985e-11!GO:0042623;ATPase activity, coupled;6.77798077822454e-11!GO:0005789;endoplasmic reticulum membrane;7.67730013289789e-11!GO:0051186;cofactor metabolic process;1.75598516007492e-10!GO:0003712;transcription cofactor activity;1.79611900535753e-10!GO:0065004;protein-DNA complex assembly;1.90947416787521e-10!GO:0006464;protein modification process;1.98916430054466e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.28878960588339e-10!GO:0006605;protein targeting;2.39549504963434e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.67853406029017e-10!GO:0003743;translation initiation factor activity;5.97564463228439e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.95350044061921e-10!GO:0016607;nuclear speck;8.32188907959306e-10!GO:0006413;translational initiation;9.32875236548557e-10!GO:0043687;post-translational protein modification;1.01774223723251e-09!GO:0031982;vesicle;1.121652830848e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.25175791996387e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.46391782365616e-09!GO:0043566;structure-specific DNA binding;1.66225435712606e-09!GO:0016568;chromatin modification;1.81848789577916e-09!GO:0050657;nucleic acid transport;1.94264213433363e-09!GO:0051236;establishment of RNA localization;1.94264213433363e-09!GO:0050658;RNA transport;1.94264213433363e-09!GO:0006403;RNA localization;2.03563334925037e-09!GO:0005643;nuclear pore;2.29005161190066e-09!GO:0006446;regulation of translational initiation;2.51807367844132e-09!GO:0031410;cytoplasmic vesicle;2.52193437391335e-09!GO:0006163;purine nucleotide metabolic process;4.16305841028136e-09!GO:0019829;cation-transporting ATPase activity;4.98361494591647e-09!GO:0009055;electron carrier activity;5.72028515317036e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.00688241951042e-09!GO:0006261;DNA-dependent DNA replication;7.7077112736887e-09!GO:0042254;ribosome biogenesis and assembly;1.02138080990238e-08!GO:0008639;small protein conjugating enzyme activity;1.02691003844325e-08!GO:0051726;regulation of cell cycle;1.06000137329053e-08!GO:0006732;coenzyme metabolic process;1.24220856703562e-08!GO:0000074;regulation of progression through cell cycle;1.39737889355491e-08!GO:0000775;chromosome, pericentric region;1.42090684580736e-08!GO:0009259;ribonucleotide metabolic process;1.45692976165551e-08!GO:0031988;membrane-bound vesicle;1.54347359778523e-08!GO:0006164;purine nucleotide biosynthetic process;1.69049415558468e-08!GO:0006334;nucleosome assembly;1.87000856636754e-08!GO:0015986;ATP synthesis coupled proton transport;2.25403632617534e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.25403632617534e-08!GO:0004842;ubiquitin-protein ligase activity;2.25403632617534e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.53530343496494e-08!GO:0006366;transcription from RNA polymerase II promoter;2.59675647722216e-08!GO:0004386;helicase activity;2.88560736742279e-08!GO:0003697;single-stranded DNA binding;3.12340353996123e-08!GO:0031497;chromatin assembly;3.12340353996123e-08!GO:0065002;intracellular protein transport across a membrane;3.14700943614043e-08!GO:0050794;regulation of cellular process;4.22331327823416e-08!GO:0009150;purine ribonucleotide metabolic process;4.71043655619884e-08!GO:0005874;microtubule;4.7943742300249e-08!GO:0006913;nucleocytoplasmic transport;6.49968815671374e-08!GO:0006461;protein complex assembly;6.50067529904331e-08!GO:0009141;nucleoside triphosphate metabolic process;6.57426469604565e-08!GO:0009060;aerobic respiration;6.90455213656383e-08!GO:0009260;ribonucleotide biosynthetic process;8.07063805539518e-08!GO:0019787;small conjugating protein ligase activity;8.3378974686706e-08!GO:0008565;protein transporter activity;8.61172070020364e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.82411402899071e-08!GO:0051169;nuclear transport;1.02328134024215e-07!GO:0045333;cellular respiration;1.03927365612182e-07!GO:0005657;replication fork;1.03927365612182e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.08108608166297e-07!GO:0016779;nucleotidyltransferase activity;1.11159079080435e-07!GO:0051028;mRNA transport;1.1562658027212e-07!GO:0005793;ER-Golgi intermediate compartment;1.18200256835584e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.27030121641392e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.27030121641392e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.91344897157078e-07!GO:0016881;acid-amino acid ligase activity;2.47557846268405e-07!GO:0006399;tRNA metabolic process;2.54717508467139e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.65157126440883e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.65157126440883e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.65463094247993e-07!GO:0032446;protein modification by small protein conjugation;3.15701182211393e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.32236108039534e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.32236108039534e-07!GO:0030532;small nuclear ribonucleoprotein complex;3.87657382941597e-07!GO:0045045;secretory pathway;4.16884681434639e-07!GO:0005525;GTP binding;4.98595222268757e-07!GO:0016567;protein ubiquitination;5.79107984678908e-07!GO:0046930;pore complex;5.99247046337501e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.38323596151245e-07!GO:0019222;regulation of metabolic process;6.59860959730699e-07!GO:0006754;ATP biosynthetic process;6.93994919452318e-07!GO:0006753;nucleoside phosphate metabolic process;6.93994919452318e-07!GO:0046034;ATP metabolic process;7.47764629868871e-07!GO:0044431;Golgi apparatus part;1.34080824572252e-06!GO:0000245;spliceosome assembly;1.37552968641572e-06!GO:0009056;catabolic process;1.48414739375248e-06!GO:0051188;cofactor biosynthetic process;1.66451123188901e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.7150732617392e-06!GO:0006752;group transfer coenzyme metabolic process;2.15078587237399e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.53980315336002e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.53980315336002e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.53980315336002e-06!GO:0000075;cell cycle checkpoint;2.60884869968962e-06!GO:0008026;ATP-dependent helicase activity;2.66897960535625e-06!GO:0007059;chromosome segregation;3.31130747941269e-06!GO:0000228;nuclear chromosome;3.46406238726748e-06!GO:0005819;spindle;3.54297048608482e-06!GO:0003924;GTPase activity;3.80407471473458e-06!GO:0045259;proton-transporting ATP synthase complex;4.20005881580333e-06!GO:0043038;amino acid activation;4.25198047505183e-06!GO:0006418;tRNA aminoacylation for protein translation;4.25198047505183e-06!GO:0043039;tRNA aminoacylation;4.25198047505183e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.49319583651489e-06!GO:0006099;tricarboxylic acid cycle;5.00364239692282e-06!GO:0046356;acetyl-CoA catabolic process;5.00364239692282e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.03410547554681e-06!GO:0007005;mitochondrion organization and biogenesis;5.09345378960993e-06!GO:0006613;cotranslational protein targeting to membrane;6.02152695624412e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.86647236072489e-06!GO:0016740;transferase activity;7.10021618136411e-06!GO:0005667;transcription factor complex;7.62210003935821e-06!GO:0048475;coated membrane;8.5512087317436e-06!GO:0030117;membrane coat;8.5512087317436e-06!GO:0006793;phosphorus metabolic process;8.56879715742592e-06!GO:0006796;phosphate metabolic process;8.56879715742592e-06!GO:0004298;threonine endopeptidase activity;8.58441822535377e-06!GO:0005813;centrosome;8.85783877062963e-06!GO:0009108;coenzyme biosynthetic process;9.4207119752145e-06!GO:0007051;spindle organization and biogenesis;9.7462043883692e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.14059988435796e-05!GO:0006084;acetyl-CoA metabolic process;1.1481701428749e-05!GO:0051325;interphase;1.2275443783956e-05!GO:0032561;guanyl ribonucleotide binding;1.23261334686889e-05!GO:0019001;guanyl nucleotide binding;1.23261334686889e-05!GO:0012501;programmed cell death;1.29891797003456e-05!GO:0006915;apoptosis;1.34236777472452e-05!GO:0044454;nuclear chromosome part;1.4208873137986e-05!GO:0006364;rRNA processing;1.72425373384151e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.73975304368051e-05!GO:0007017;microtubule-based process;2.00530144753913e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.06203899471413e-05!GO:0016787;hydrolase activity;2.10872522390452e-05!GO:0017038;protein import;2.17655171559309e-05!GO:0030120;vesicle coat;2.19442693050973e-05!GO:0030662;coated vesicle membrane;2.19442693050973e-05!GO:0016072;rRNA metabolic process;2.27064144887237e-05!GO:0016564;transcription repressor activity;2.41485668696522e-05!GO:0009109;coenzyme catabolic process;2.43954090443997e-05!GO:0003682;chromatin binding;2.43954090443997e-05!GO:0051329;interphase of mitotic cell cycle;2.65124922447609e-05!GO:0003714;transcription corepressor activity;2.73466856885456e-05!GO:0008654;phospholipid biosynthetic process;3.14282922307113e-05!GO:0050789;regulation of biological process;3.69425732700745e-05!GO:0005815;microtubule organizing center;3.7995839229746e-05!GO:0006350;transcription;3.8638438743551e-05!GO:0005798;Golgi-associated vesicle;3.94403730887589e-05!GO:0007264;small GTPase mediated signal transduction;4.76171714282151e-05!GO:0000151;ubiquitin ligase complex;5.64590155882397e-05!GO:0003690;double-stranded DNA binding;5.79676517201349e-05!GO:0051187;cofactor catabolic process;5.82875954380777e-05!GO:0009117;nucleotide metabolic process;5.84540663229228e-05!GO:0015631;tubulin binding;6.78945302591434e-05!GO:0005768;endosome;6.91213006369714e-05!GO:0000139;Golgi membrane;6.97436390742811e-05!GO:0003729;mRNA binding;7.99162016689519e-05!GO:0031323;regulation of cellular metabolic process;8.28948430268579e-05!GO:0000776;kinetochore;8.37157622274337e-05!GO:0008219;cell death;0.000117994147501519!GO:0016265;death;0.000117994147501519!GO:0016363;nuclear matrix;0.000119099541879129!GO:0043623;cellular protein complex assembly;0.000126939012418119!GO:0003713;transcription coactivator activity;0.000130397967628501!GO:0008094;DNA-dependent ATPase activity;0.000140866134376992!GO:0003724;RNA helicase activity;0.000143344484663949!GO:0045454;cell redox homeostasis;0.000151593035750597!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000155019767668317!GO:0046474;glycerophospholipid biosynthetic process;0.00016100591501901!GO:0006612;protein targeting to membrane;0.000170105253119777!GO:0003684;damaged DNA binding;0.000178588201852162!GO:0051168;nuclear export;0.000184807930747298!GO:0030867;rough endoplasmic reticulum membrane;0.000189242421522802!GO:0016310;phosphorylation;0.000197904879583243!GO:0051246;regulation of protein metabolic process;0.000200313383919374!GO:0003899;DNA-directed RNA polymerase activity;0.000205946124084461!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000206931055549761!GO:0000314;organellar small ribosomal subunit;0.000223666146757341!GO:0005763;mitochondrial small ribosomal subunit;0.000223666146757341!GO:0009892;negative regulation of metabolic process;0.000230556604273532!GO:0007010;cytoskeleton organization and biogenesis;0.000236112078818166!GO:0019899;enzyme binding;0.000241029501485079!GO:0000792;heterochromatin;0.000245462363823161!GO:0031324;negative regulation of cellular metabolic process;0.00026996828929799!GO:0005773;vacuole;0.000278887889298505!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00029284607865363!GO:0032940;secretion by cell;0.000311532244685245!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000336332616072708!GO:0010468;regulation of gene expression;0.000401973896291313!GO:0006302;double-strand break repair;0.000442663967064919!GO:0048471;perinuclear region of cytoplasm;0.000453367723691964!GO:0008250;oligosaccharyl transferase complex;0.000489041682262216!GO:0005762;mitochondrial large ribosomal subunit;0.000499177024984269!GO:0000315;organellar large ribosomal subunit;0.000499177024984269!GO:0004860;protein kinase inhibitor activity;0.0005113389540271!GO:0006414;translational elongation;0.000514436344226334!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000565997652745521!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000571558359778521!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000571603159388262!GO:0043681;protein import into mitochondrion;0.000580563047032142!GO:0015980;energy derivation by oxidation of organic compounds;0.000580737410437439!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000618035877128555!GO:0030176;integral to endoplasmic reticulum membrane;0.000630072737546786!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000641539467618358!GO:0015399;primary active transmembrane transporter activity;0.000641539467618358!GO:0006818;hydrogen transport;0.000659117562152849!GO:0015992;proton transport;0.000668397171420678!GO:0043069;negative regulation of programmed cell death;0.000678446931390704!GO:0030880;RNA polymerase complex;0.000686829549435671!GO:0032774;RNA biosynthetic process;0.000707492790624874!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000719199845281451!GO:0042981;regulation of apoptosis;0.00076992636252485!GO:0000049;tRNA binding;0.0007745519322303!GO:0043596;nuclear replication fork;0.000805328395392629!GO:0003677;DNA binding;0.000827644073849411!GO:0031072;heat shock protein binding;0.00085507281302059!GO:0046467;membrane lipid biosynthetic process;0.000874501241749999!GO:0006351;transcription, DNA-dependent;0.000904568732857875!GO:0043067;regulation of programmed cell death;0.000950083832493255!GO:0005788;endoplasmic reticulum lumen;0.000953743142356882!GO:0051052;regulation of DNA metabolic process;0.000959354669917854!GO:0046489;phosphoinositide biosynthetic process;0.000965578902343969!GO:0004576;oligosaccharyl transferase activity;0.00100073108929213!GO:0043066;negative regulation of apoptosis;0.00104055576242678!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00117502378267241!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00121796470874678!GO:0000428;DNA-directed RNA polymerase complex;0.00121796470874678!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00122728414755319!GO:0016853;isomerase activity;0.00123538385266497!GO:0008017;microtubule binding;0.00129125590067392!GO:0030135;coated vesicle;0.00130573896277204!GO:0051920;peroxiredoxin activity;0.00133264388706869!GO:0043021;ribonucleoprotein binding;0.00133642750773082!GO:0051427;hormone receptor binding;0.00135465309397335!GO:0019210;kinase inhibitor activity;0.00151017830859669!GO:0006338;chromatin remodeling;0.00154116818706379!GO:0006383;transcription from RNA polymerase III promoter;0.00154116818706379!GO:0048500;signal recognition particle;0.00154343857583563!GO:0005637;nuclear inner membrane;0.00156107772502005!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00164391923820356!GO:0048523;negative regulation of cellular process;0.00167341028012011!GO:0045786;negative regulation of progression through cell cycle;0.00169390798440602!GO:0018196;peptidyl-asparagine modification;0.00170736683482353!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00170736683482353!GO:0016859;cis-trans isomerase activity;0.00170777117382529!GO:0031124;mRNA 3'-end processing;0.00174379428568029!GO:0006284;base-excision repair;0.00193664271018034!GO:0051789;response to protein stimulus;0.00195864639489277!GO:0006986;response to unfolded protein;0.00195864639489277!GO:0000786;nucleosome;0.00196597420806259!GO:0005875;microtubule associated complex;0.00204300579568509!GO:0008312;7S RNA binding;0.0020616270516209!GO:0051170;nuclear import;0.00214977276012225!GO:0016126;sterol biosynthetic process;0.00218632635524137!GO:0006405;RNA export from nucleus;0.00221762981059401!GO:0004674;protein serine/threonine kinase activity;0.00233390677308198!GO:0005885;Arp2/3 protein complex;0.00233390677308198!GO:0035257;nuclear hormone receptor binding;0.00238452814423893!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00238452814423893!GO:0009165;nucleotide biosynthetic process;0.00240447858425355!GO:0045449;regulation of transcription;0.00244856323173002!GO:0005770;late endosome;0.00247234655229704!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0024852515178238!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0024852515178238!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0024852515178238!GO:0008186;RNA-dependent ATPase activity;0.0025730494520282!GO:0042802;identical protein binding;0.00279722202965072!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00281927914227605!GO:0045047;protein targeting to ER;0.00281927914227605!GO:0006916;anti-apoptosis;0.00285660430076817!GO:0007093;mitotic cell cycle checkpoint;0.00288004365916238!GO:0032508;DNA duplex unwinding;0.00318476286509603!GO:0032392;DNA geometric change;0.00318476286509603!GO:0005876;spindle microtubule;0.00319561012553156!GO:0030658;transport vesicle membrane;0.00319561012553156!GO:0007088;regulation of mitosis;0.00320849472766107!GO:0008168;methyltransferase activity;0.00326440916948924!GO:0016481;negative regulation of transcription;0.00327257446745557!GO:0008637;apoptotic mitochondrial changes;0.00330141340228109!GO:0008092;cytoskeletal protein binding;0.00338650004514051!GO:0006310;DNA recombination;0.00343515992313679!GO:0044440;endosomal part;0.00347421407466264!GO:0010008;endosome membrane;0.00347421407466264!GO:0000059;protein import into nucleus, docking;0.00347421407466264!GO:0005791;rough endoplasmic reticulum;0.0035426519401535!GO:0007052;mitotic spindle organization and biogenesis;0.0036273759504917!GO:0043492;ATPase activity, coupled to movement of substances;0.00366555827679167!GO:0006606;protein import into nucleus;0.00374184798398483!GO:0031252;leading edge;0.00376950572686877!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00381976551478636!GO:0016741;transferase activity, transferring one-carbon groups;0.00382449242032101!GO:0030133;transport vesicle;0.00385655425756107!GO:0006268;DNA unwinding during replication;0.00385655425756107!GO:0051540;metal cluster binding;0.00394305449876598!GO:0051536;iron-sulfur cluster binding;0.00394305449876598!GO:0000323;lytic vacuole;0.00407302543095804!GO:0005764;lysosome;0.00407302543095804!GO:0019867;outer membrane;0.00409202885029891!GO:0007006;mitochondrial membrane organization and biogenesis;0.00416422636214396!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00431530310197348!GO:0006270;DNA replication initiation;0.0044339708435623!GO:0006352;transcription initiation;0.00447660845688292!GO:0000790;nuclear chromatin;0.00455456639348113!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00459532415180472!GO:0003702;RNA polymerase II transcription factor activity;0.00464529739402117!GO:0000793;condensed chromosome;0.00464851668100247!GO:0030118;clathrin coat;0.00481832305712785!GO:0003746;translation elongation factor activity;0.00484271043247213!GO:0031968;organelle outer membrane;0.00488714469100844!GO:0006650;glycerophospholipid metabolic process;0.00490043619941122!GO:0008610;lipid biosynthetic process;0.0049134334444147!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00492406807255234!GO:0033116;ER-Golgi intermediate compartment membrane;0.0049339480991669!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00501789241007998!GO:0005741;mitochondrial outer membrane;0.00503820256956327!GO:0005048;signal sequence binding;0.00506819480121431!GO:0006595;polyamine metabolic process;0.00521178468376575!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00538517977179143!GO:0019887;protein kinase regulator activity;0.00563571060092537!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00579698412588502!GO:0042770;DNA damage response, signal transduction;0.00589096570889083!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00589675419420282!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00589675419420282!GO:0032259;methylation;0.00600062031021045!GO:0004527;exonuclease activity;0.00611702181765295!GO:0001836;release of cytochrome c from mitochondria;0.00617510419073782!GO:0043601;nuclear replisome;0.00621225279309827!GO:0030894;replisome;0.00621225279309827!GO:0030660;Golgi-associated vesicle membrane;0.00621377966929713!GO:0016791;phosphoric monoester hydrolase activity;0.00629864063084458!GO:0031123;RNA 3'-end processing;0.00632897325455043!GO:0004004;ATP-dependent RNA helicase activity;0.00641466531949129!GO:0016563;transcription activator activity;0.00647634334822308!GO:0006839;mitochondrial transport;0.006487835720462!GO:0006378;mRNA polyadenylation;0.00667886108270817!GO:0005720;nuclear heterochromatin;0.00671176050472079!GO:0006891;intra-Golgi vesicle-mediated transport;0.00677059730962769!GO:0019207;kinase regulator activity;0.00704758264216729!GO:0022890;inorganic cation transmembrane transporter activity;0.00714599331260042!GO:0016584;nucleosome positioning;0.007199761432236!GO:0030137;COPI-coated vesicle;0.00761307649956968!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00769533373641948!GO:0016251;general RNA polymerase II transcription factor activity;0.00777678559004331!GO:0006144;purine base metabolic process;0.00786769101933398!GO:0040029;regulation of gene expression, epigenetic;0.00796598256388521!GO:0048519;negative regulation of biological process;0.00818708402838528!GO:0005684;U2-dependent spliceosome;0.00819843319346938!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00821251447774136!GO:0006402;mRNA catabolic process;0.00898160023981466!GO:0006892;post-Golgi vesicle-mediated transport;0.00900334643639076!GO:0006626;protein targeting to mitochondrion;0.0090628678717373!GO:0006355;regulation of transcription, DNA-dependent;0.00908100943158941!GO:0008022;protein C-terminus binding;0.00909273785000142!GO:0032594;protein transport within lipid bilayer;0.00909273785000142!GO:0032907;transforming growth factor-beta3 production;0.00909273785000142!GO:0032596;protein transport into lipid raft;0.00909273785000142!GO:0032910;regulation of transforming growth factor-beta3 production;0.00909273785000142!GO:0032595;B cell receptor transport within lipid bilayer;0.00909273785000142!GO:0033606;chemokine receptor transport within lipid bilayer;0.00909273785000142!GO:0032600;chemokine receptor transport out of lipid raft;0.00909273785000142!GO:0032599;protein transport out of lipid raft;0.00909273785000142!GO:0032597;B cell receptor transport into lipid raft;0.00909273785000142!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.00909273785000142!GO:0008632;apoptotic program;0.00927802003676525!GO:0048487;beta-tubulin binding;0.00930873264748747!GO:0006505;GPI anchor metabolic process;0.00932930770264868!GO:0051287;NAD binding;0.00935163306446907!GO:0044452;nucleolar part;0.00996958129210284!GO:0019783;small conjugating protein-specific protease activity;0.0100737275331033!GO:0043414;biopolymer methylation;0.0102303305666901!GO:0022406;membrane docking;0.0102512435074915!GO:0048278;vesicle docking;0.0102512435074915!GO:0045892;negative regulation of transcription, DNA-dependent;0.0104467819874289!GO:0006506;GPI anchor biosynthetic process;0.0107218986502702!GO:0005774;vacuolar membrane;0.0109632235361919!GO:0006401;RNA catabolic process;0.0111279390241051!GO:0003725;double-stranded RNA binding;0.0114398088465585!GO:0009116;nucleoside metabolic process;0.0119216569812564!GO:0032404;mismatch repair complex binding;0.0121750854898202!GO:0005905;coated pit;0.0121797381615855!GO:0051087;chaperone binding;0.0122254305437659!GO:0008033;tRNA processing;0.0123354042700094!GO:0005769;early endosome;0.0124050189316366!GO:0005832;chaperonin-containing T-complex;0.0125038652071425!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0126923516350977!GO:0015002;heme-copper terminal oxidase activity;0.0126923516350977!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0126923516350977!GO:0004129;cytochrome-c oxidase activity;0.0126923516350977!GO:0004843;ubiquitin-specific protease activity;0.0128301515995974!GO:0030663;COPI coated vesicle membrane;0.0128371663959906!GO:0030126;COPI vesicle coat;0.0128371663959906!GO:0012506;vesicle membrane;0.0137423335461539!GO:0006695;cholesterol biosynthetic process;0.0137750045089673!GO:0006611;protein export from nucleus;0.0138276487725786!GO:0008629;induction of apoptosis by intracellular signals;0.0138276487725786!GO:0016585;chromatin remodeling complex;0.0141853455181298!GO:0004221;ubiquitin thiolesterase activity;0.0147237583724837!GO:0016197;endosome transport;0.0150598266162808!GO:0005669;transcription factor TFIID complex;0.0151282525253047!GO:0000725;recombinational repair;0.0152859334071308!GO:0000724;double-strand break repair via homologous recombination;0.0152859334071308!GO:0051128;regulation of cellular component organization and biogenesis;0.0166008880285756!GO:0044433;cytoplasmic vesicle part;0.0166026856449526!GO:0005083;small GTPase regulator activity;0.0166909534330151!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0170520119727232!GO:0030134;ER to Golgi transport vesicle;0.0176081248393171!GO:0005663;DNA replication factor C complex;0.0176081248393171!GO:0016272;prefoldin complex;0.0177799936633497!GO:0006904;vesicle docking during exocytosis;0.0177799936633497!GO:0042393;histone binding;0.0177938601294039!GO:0006376;mRNA splice site selection;0.017889885478251!GO:0000389;nuclear mRNA 3'-splice site recognition;0.017889885478251!GO:0004721;phosphoprotein phosphatase activity;0.0184058537892685!GO:0009066;aspartate family amino acid metabolic process;0.0184058537892685!GO:0030384;phosphoinositide metabolic process;0.0185016450346151!GO:0031570;DNA integrity checkpoint;0.0187232745759715!GO:0051252;regulation of RNA metabolic process;0.019175687834506!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0202068359438821!GO:0007004;telomere maintenance via telomerase;0.0203111413690223!GO:0032405;MutLalpha complex binding;0.0203804101810066!GO:0016491;oxidoreductase activity;0.0206608364616166!GO:0005869;dynactin complex;0.0210528536784541!GO:0008276;protein methyltransferase activity;0.0211418531931075!GO:0006275;regulation of DNA replication;0.0216083511715638!GO:0051539;4 iron, 4 sulfur cluster binding;0.0219766972529845!GO:0003678;DNA helicase activity;0.0224743817721596!GO:0043022;ribosome binding;0.0225588675571514!GO:0043284;biopolymer biosynthetic process;0.0226817646278728!GO:0000086;G2/M transition of mitotic cell cycle;0.0227946503525941!GO:0006984;ER-nuclear signaling pathway;0.0229578452568421!GO:0031057;negative regulation of histone modification;0.0231325138288256!GO:0035067;negative regulation of histone acetylation;0.0231325138288256!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0232490537941123!GO:0008139;nuclear localization sequence binding;0.0233733151957704!GO:0031625;ubiquitin protein ligase binding;0.0237307004512052!GO:0030027;lamellipodium;0.0239432176602049!GO:0003923;GPI-anchor transamidase activity;0.0240729639604386!GO:0016255;attachment of GPI anchor to protein;0.0240729639604386!GO:0042765;GPI-anchor transamidase complex;0.0240729639604386!GO:0003711;transcription elongation regulator activity;0.0246508711268869!GO:0008408;3'-5' exonuclease activity;0.024665050807032!GO:0016311;dephosphorylation;0.0250344202953327!GO:0006091;generation of precursor metabolites and energy;0.0250438618234329!GO:0035267;NuA4 histone acetyltransferase complex;0.0250653136023333!GO:0006007;glucose catabolic process;0.0251645145987811!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0252313027850965!GO:0003756;protein disulfide isomerase activity;0.0256898151705112!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0256898151705112!GO:0000118;histone deacetylase complex;0.0257010651978038!GO:0016569;covalent chromatin modification;0.0260226659617264!GO:0000922;spindle pole;0.0265652627418758!GO:0005844;polysome;0.0268929974907939!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0268929974907939!GO:0005784;translocon complex;0.0269238014322084!GO:0030521;androgen receptor signaling pathway;0.0272748835948897!GO:0044437;vacuolar part;0.0278453126863244!GO:0006497;protein amino acid lipidation;0.0280394306201133!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0281714105168122!GO:0030127;COPII vesicle coat;0.0282966987829197!GO:0012507;ER to Golgi transport vesicle membrane;0.0282966987829197!GO:0043130;ubiquitin binding;0.0284231092918993!GO:0032182;small conjugating protein binding;0.0284231092918993!GO:0007265;Ras protein signal transduction;0.0286379813419075!GO:0000096;sulfur amino acid metabolic process;0.0294378399823988!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0294505612739824!GO:0051059;NF-kappaB binding;0.0299105851119679!GO:0006301;postreplication repair;0.0302275015447972!GO:0046128;purine ribonucleoside metabolic process;0.0311922090796543!GO:0042278;purine nucleoside metabolic process;0.0311922090796543!GO:0008538;proteasome activator activity;0.031324854764585!GO:0004518;nuclease activity;0.0314149294419338!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0316174623015453!GO:0060164;regulation of timing of neuron differentiation;0.0316174623015453!GO:0014017;neuroblast fate commitment;0.0316174623015453!GO:0007400;neuroblast fate determination;0.0316174623015453!GO:0014016;neuroblast differentiation;0.0316174623015453!GO:0060163;subpallium neuron fate commitment;0.0316174623015453!GO:0060165;regulation of timing of subpallium neuron differentiation;0.0316174623015453!GO:0043631;RNA polyadenylation;0.0319645249505059!GO:0008143;poly(A) binding;0.0319645249505059!GO:0030131;clathrin adaptor complex;0.0321762477625739!GO:0030119;AP-type membrane coat adaptor complex;0.0326652010306586!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0326730910233973!GO:0016579;protein deubiquitination;0.0328713141327929!GO:0000082;G1/S transition of mitotic cell cycle;0.0331227914495346!GO:0030036;actin cytoskeleton organization and biogenesis;0.0336142243260125!GO:0000819;sister chromatid segregation;0.0346153150132298!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0347618210642507!GO:0030659;cytoplasmic vesicle membrane;0.0350276174240816!GO:0016790;thiolester hydrolase activity;0.0353842676726876!GO:0000287;magnesium ion binding;0.0354401167969718!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.035635235730504!GO:0017134;fibroblast growth factor binding;0.035635235730504!GO:0006367;transcription initiation from RNA polymerase II promoter;0.035665338948054!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0362847094462241!GO:0004523;ribonuclease H activity;0.0365929992892803!GO:0008287;protein serine/threonine phosphatase complex;0.0368275585173584!GO:0043154;negative regulation of caspase activity;0.0370263658536415!GO:0000303;response to superoxide;0.0370263658536415!GO:0065007;biological regulation;0.037248227565181!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0373788530478029!GO:0016408;C-acyltransferase activity;0.037688136906785!GO:0043189;H4/H2A histone acetyltransferase complex;0.0378547314351392!GO:0031056;regulation of histone modification;0.0382370632318787!GO:0031902;late endosome membrane;0.0382549977176542!GO:0000209;protein polyubiquitination;0.0393401456180032!GO:0006643;membrane lipid metabolic process;0.0393560603720537!GO:0009112;nucleobase metabolic process;0.0393560603720537!GO:0031577;spindle checkpoint;0.0393560603720537!GO:0032200;telomere organization and biogenesis;0.0393560603720537!GO:0000723;telomere maintenance;0.0393560603720537!GO:0042158;lipoprotein biosynthetic process;0.0397249797232282!GO:0006564;L-serine biosynthetic process;0.0398376313158827!GO:0008652;amino acid biosynthetic process;0.039893554692412!GO:0051881;regulation of mitochondrial membrane potential;0.040911473932552!GO:0008234;cysteine-type peptidase activity;0.0412787088087447!GO:0031994;insulin-like growth factor I binding;0.0412787088087447!GO:0031995;insulin-like growth factor II binding;0.0412787088087447!GO:0051053;negative regulation of DNA metabolic process;0.0417820819467385!GO:0006541;glutamine metabolic process;0.0442429357890296!GO:0006406;mRNA export from nucleus;0.0443254028018178!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0450002210020887!GO:0045947;negative regulation of translational initiation;0.0451193843286262!GO:0019238;cyclohydrolase activity;0.0466367729290532!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0470251716788952!GO:0031529;ruffle organization and biogenesis;0.0476433347646352!GO:0007243;protein kinase cascade;0.0476815809171744!GO:0006672;ceramide metabolic process;0.048400653167291!GO:0043433;negative regulation of transcription factor activity;0.0485123787551958!GO:0016581;NuRD complex;0.0485684156625329!GO:0008537;proteasome activator complex;0.0485684156625329!GO:0006278;RNA-dependent DNA replication;0.0485684156625329!GO:0000123;histone acetyltransferase complex;0.0492144067534939!GO:0046979;TAP2 binding;0.0493157280319871!GO:0046977;TAP binding;0.0493157280319871!GO:0046978;TAP1 binding;0.0493157280319871!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0494726781914705!GO:0007019;microtubule depolymerization;0.0499467082829345 | |||
|sample_id=10562 | |sample_id=10562 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=lung | |sample_tissue=lung | ||
|top_motifs=LMO2:2.82472247705;ZEB1:2.35060199783;MYOD1:2.30426764938;SNAI1..3:2.1993680861;DBP:2.12425723061;GFI1:2.08817657097;NFY{A,B,C}:2.0816043083;PAX3,7:1.97520520582;TFDP1:1.97475951492;ARID5B:1.86658156655;BREu{core}:1.83458702096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.74704520013;FOXA2:1.53736731038;XCPE1{core}:1.48578974696;ALX1:1.45801292024;bHLH_family:1.42194858657;E2F1..5:1.36983989966;ATF2:1.32773628972;NKX2-3_NKX2-5:1.27367447421;NRF1:1.26891193913;SP1:1.2508736051;JUN:1.24691675294;SOX{8,9,10}:1.22410416627;ZFP161:1.19338191546;VSX1,2:1.18088730283;FOX{I1,J2}:1.12918631722;ZNF143:1.11298470812;ADNP_IRX_SIX_ZHX:0.893030920107;SREBF1,2:0.891362441978;AHR_ARNT_ARNT2:0.886400461325;PPARG:0.884071194796;FOX{D1,D2}:0.869099313592;ELK1,4_GABP{A,B1}:0.838692996771;FOX{F1,F2,J1}:0.786385572957;RFX1:0.780275038343;HOX{A6,A7,B6,B7}:0.745525871279;FOXO1,3,4:0.712707039673;TFAP2B:0.707730716561;ATF6:0.704770874977;PAX5:0.688932894415;YY1:0.688622806365;ATF5_CREB3:0.649572715498;NKX3-1:0.617377603707;MED-1{core}:0.614693406071;MTE{core}:0.590550293364;IKZF2:0.580959629736;ATF4:0.577087357641;SOX2:0.57017167703;NHLH1,2:0.567543754659;HIC1:0.566894650076;PRRX1,2:0.530981020976;FOXP1:0.528748914365;NKX6-1,2:0.518121505474;PITX1..3:0.502749875486;ZBTB6:0.492869538957;IRF1,2:0.454901602791;EP300:0.44388952236;ZNF423:0.441766516649;PATZ1:0.439790819901;MYB:0.431154454397;T:0.413626767151;PAX6:0.385099612707;IRF7:0.377180377071;NANOG:0.370645836126;FOXP3:0.336660737369;NKX2-1,4:0.325460024535;FOXN1:0.320252118862;RREB1:0.311533776639;POU6F1:0.299436894121;MYFfamily:0.282217981016;REST:0.276399752224;PAX8:0.266726797849;TGIF1:0.257746286295;ESRRA:0.243486604769;SOX17:0.223475122254;FOXQ1:0.22231907221;CUX2:0.201473563137;MTF1:0.181020021609;MAZ:0.171071012022;RFX2..5_RFXANK_RFXAP:0.160019474235;GCM1,2:0.15805815513;NR5A1,2:0.12858520197;EGR1..3:0.127811727443;GATA4:0.118913751012;FOXD3:0.0850749244432;CEBPA,B_DDIT3:0.0617838440592;FOXM1:0.0530943125811;HIF1A:0.0419558134307;HAND1,2:0.0223494329422;PBX1:0.0108093764381;ONECUT1,2:0.00259301443631;MZF1:-0.0233492556158;ZIC1..3:-0.0393152125665;TLX2:-0.0668279139772;FOSL2:-0.0842480216843;HOXA9_MEIS1:-0.109820863818;NKX3-2:-0.132304905823;SOX5:-0.149120817294;MEF2{A,B,C,D}:-0.15822594023;SMAD1..7,9:-0.186054189956;LHX3,4:-0.192662106494;LEF1_TCF7_TCF7L1,2:-0.208711740858;TP53:-0.215884756706;SPIB:-0.227582210669;TBP:-0.230849446799;POU5F1:-0.231123525908;HOX{A4,D4}:-0.23282143267;PDX1:-0.243339363129;PAX1,9:-0.247176372981;CDC5L:-0.248058333523;TOPORS:-0.284608890443;RORA:-0.294737990012;POU2F1..3:-0.296225796253;XBP1:-0.311465986058;FOXL1:-0.315277473811;ELF1,2,4:-0.321841621901;ETS1,2:-0.337343526739;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.339223375339;GTF2I:-0.345118905847;RXR{A,B,G}:-0.345818853306;TEF:-0.362490384393;BPTF:-0.378090327242;TLX1..3_NFIC{dimer}:-0.391975021594;GATA6:-0.393210275926;RBPJ:-0.395808461135;POU1F1:-0.430529074617;GFI1B:-0.432540783128;RXRA_VDR{dimer}:-0.465439561714;EVI1:-0.46657380216;CREB1:-0.47105833429;PAX2:-0.480190407153;NFKB1_REL_RELA:-0.507296901815;HNF1A:-0.510864671402;ZBTB16:-0.51854643049;EN1,2:-0.518723545447;SPI1:-0.527840924049;HLF:-0.536568346866;NFE2:-0.553994157553;FOS_FOS{B,L1}_JUN{B,D}:-0.573378687341;GZF1:-0.574940759794;BACH2:-0.601958711978;ZNF384:-0.623610739591;HNF4A_NR2F1,2:-0.636490954881;UFEwm:-0.653687446736;ZNF148:-0.691749678302;TFAP2{A,C}:-0.707186829109;NFIX:-0.734060958061;HES1:-0.755542801315;KLF4:-0.784045506359;NR3C1:-0.784503860455;OCT4_SOX2{dimer}:-0.786487326989;NR6A1:-0.787843147643;TBX4,5:-0.796130186964;POU3F1..4:-0.800762946528;PRDM1:-0.837718898688;HBP1_HMGB_SSRP1_UBTF:-0.843571599423;MYBL2:-0.84920869043;AR:-0.892170513046;RUNX1..3:-0.892933176046;NFIL3:-0.901754582287;TEAD1:-0.919726294366;HMGA1,2:-0.92658958717;TFCP2:-0.96204477261;HOX{A5,B5}:-0.969087738396;CDX1,2,4:-0.996321589507;DMAP1_NCOR{1,2}_SMARC:-1.02604283187;GTF2A1,2:-1.04284072236;STAT1,3:-1.04288581378;NR1H4:-1.06749551089;NKX2-2,8:-1.08401801023;SRF:-1.09242688703;MAFB:-1.13201092537;STAT2,4,6:-1.18301729379;NANOG{mouse}:-1.2018856081;NFE2L2:-1.2271473228;TFAP4:-1.24239765422;TAL1_TCF{3,4,12}:-1.44959615191;AIRE:-1.49667136347;IKZF1:-1.54460714905;STAT5{A,B}:-1.64423712345;HMX1:-1.66656272376;ESR1:-1.7104466353;EBF1:-1.72363365105;PAX4:-1.73293258768;NFATC1..3:-1.73622655958;ALX4:-1.73639206751;ZNF238:-1.76659273665;GLI1..3:-1.79505530087;NFE2L1:-1.89187486597;CRX:-1.99498747778;HSF1,2:-2.46364546285;SPZ1:-2.46389508398 | |top_motifs=LMO2:2.82472247705;ZEB1:2.35060199783;MYOD1:2.30426764938;SNAI1..3:2.1993680861;DBP:2.12425723061;GFI1:2.08817657097;NFY{A,B,C}:2.0816043083;PAX3,7:1.97520520582;TFDP1:1.97475951492;ARID5B:1.86658156655;BREu{core}:1.83458702096;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.74704520013;FOXA2:1.53736731038;XCPE1{core}:1.48578974696;ALX1:1.45801292024;bHLH_family:1.42194858657;E2F1..5:1.36983989966;ATF2:1.32773628972;NKX2-3_NKX2-5:1.27367447421;NRF1:1.26891193913;SP1:1.2508736051;JUN:1.24691675294;SOX{8,9,10}:1.22410416627;ZFP161:1.19338191546;VSX1,2:1.18088730283;FOX{I1,J2}:1.12918631722;ZNF143:1.11298470812;ADNP_IRX_SIX_ZHX:0.893030920107;SREBF1,2:0.891362441978;AHR_ARNT_ARNT2:0.886400461325;PPARG:0.884071194796;FOX{D1,D2}:0.869099313592;ELK1,4_GABP{A,B1}:0.838692996771;FOX{F1,F2,J1}:0.786385572957;RFX1:0.780275038343;HOX{A6,A7,B6,B7}:0.745525871279;FOXO1,3,4:0.712707039673;TFAP2B:0.707730716561;ATF6:0.704770874977;PAX5:0.688932894415;YY1:0.688622806365;ATF5_CREB3:0.649572715498;NKX3-1:0.617377603707;MED-1{core}:0.614693406071;MTE{core}:0.590550293364;IKZF2:0.580959629736;ATF4:0.577087357641;SOX2:0.57017167703;NHLH1,2:0.567543754659;HIC1:0.566894650076;PRRX1,2:0.530981020976;FOXP1:0.528748914365;NKX6-1,2:0.518121505474;PITX1..3:0.502749875486;ZBTB6:0.492869538957;IRF1,2:0.454901602791;EP300:0.44388952236;ZNF423:0.441766516649;PATZ1:0.439790819901;MYB:0.431154454397;T:0.413626767151;PAX6:0.385099612707;IRF7:0.377180377071;NANOG:0.370645836126;FOXP3:0.336660737369;NKX2-1,4:0.325460024535;FOXN1:0.320252118862;RREB1:0.311533776639;POU6F1:0.299436894121;MYFfamily:0.282217981016;REST:0.276399752224;PAX8:0.266726797849;TGIF1:0.257746286295;ESRRA:0.243486604769;SOX17:0.223475122254;FOXQ1:0.22231907221;CUX2:0.201473563137;MTF1:0.181020021609;MAZ:0.171071012022;RFX2..5_RFXANK_RFXAP:0.160019474235;GCM1,2:0.15805815513;NR5A1,2:0.12858520197;EGR1..3:0.127811727443;GATA4:0.118913751012;FOXD3:0.0850749244432;CEBPA,B_DDIT3:0.0617838440592;FOXM1:0.0530943125811;HIF1A:0.0419558134307;HAND1,2:0.0223494329422;PBX1:0.0108093764381;ONECUT1,2:0.00259301443631;MZF1:-0.0233492556158;ZIC1..3:-0.0393152125665;TLX2:-0.0668279139772;FOSL2:-0.0842480216843;HOXA9_MEIS1:-0.109820863818;NKX3-2:-0.132304905823;SOX5:-0.149120817294;MEF2{A,B,C,D}:-0.15822594023;SMAD1..7,9:-0.186054189956;LHX3,4:-0.192662106494;LEF1_TCF7_TCF7L1,2:-0.208711740858;TP53:-0.215884756706;SPIB:-0.227582210669;TBP:-0.230849446799;POU5F1:-0.231123525908;HOX{A4,D4}:-0.23282143267;PDX1:-0.243339363129;PAX1,9:-0.247176372981;CDC5L:-0.248058333523;TOPORS:-0.284608890443;RORA:-0.294737990012;POU2F1..3:-0.296225796253;XBP1:-0.311465986058;FOXL1:-0.315277473811;ELF1,2,4:-0.321841621901;ETS1,2:-0.337343526739;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.339223375339;GTF2I:-0.345118905847;RXR{A,B,G}:-0.345818853306;TEF:-0.362490384393;BPTF:-0.378090327242;TLX1..3_NFIC{dimer}:-0.391975021594;GATA6:-0.393210275926;RBPJ:-0.395808461135;POU1F1:-0.430529074617;GFI1B:-0.432540783128;RXRA_VDR{dimer}:-0.465439561714;EVI1:-0.46657380216;CREB1:-0.47105833429;PAX2:-0.480190407153;NFKB1_REL_RELA:-0.507296901815;HNF1A:-0.510864671402;ZBTB16:-0.51854643049;EN1,2:-0.518723545447;SPI1:-0.527840924049;HLF:-0.536568346866;NFE2:-0.553994157553;FOS_FOS{B,L1}_JUN{B,D}:-0.573378687341;GZF1:-0.574940759794;BACH2:-0.601958711978;ZNF384:-0.623610739591;HNF4A_NR2F1,2:-0.636490954881;UFEwm:-0.653687446736;ZNF148:-0.691749678302;TFAP2{A,C}:-0.707186829109;NFIX:-0.734060958061;HES1:-0.755542801315;KLF4:-0.784045506359;NR3C1:-0.784503860455;OCT4_SOX2{dimer}:-0.786487326989;NR6A1:-0.787843147643;TBX4,5:-0.796130186964;POU3F1..4:-0.800762946528;PRDM1:-0.837718898688;HBP1_HMGB_SSRP1_UBTF:-0.843571599423;MYBL2:-0.84920869043;AR:-0.892170513046;RUNX1..3:-0.892933176046;NFIL3:-0.901754582287;TEAD1:-0.919726294366;HMGA1,2:-0.92658958717;TFCP2:-0.96204477261;HOX{A5,B5}:-0.969087738396;CDX1,2,4:-0.996321589507;DMAP1_NCOR{1,2}_SMARC:-1.02604283187;GTF2A1,2:-1.04284072236;STAT1,3:-1.04288581378;NR1H4:-1.06749551089;NKX2-2,8:-1.08401801023;SRF:-1.09242688703;MAFB:-1.13201092537;STAT2,4,6:-1.18301729379;NANOG{mouse}:-1.2018856081;NFE2L2:-1.2271473228;TFAP4:-1.24239765422;TAL1_TCF{3,4,12}:-1.44959615191;AIRE:-1.49667136347;IKZF1:-1.54460714905;STAT5{A,B}:-1.64423712345;HMX1:-1.66656272376;ESR1:-1.7104466353;EBF1:-1.72363365105;PAX4:-1.73293258768;NFATC1..3:-1.73622655958;ALX4:-1.73639206751;ZNF238:-1.76659273665;GLI1..3:-1.79505530087;NFE2L1:-1.89187486597;CRX:-1.99498747778;HSF1,2:-2.46364546285;SPZ1:-2.46389508398 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10562-108A4;search_select_hide=table117:FF:10562-108A4 | |||
}} | }} | ||
Latest revision as of 14:29, 3 June 2020
| Name: | small cell lung carcinoma cell line:WA-hT |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11812 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11812
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11812
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.143 |
| 10 | 10 | 0.13 |
| 100 | 100 | 0.834 |
| 101 | 101 | 0.492 |
| 102 | 102 | 0.254 |
| 103 | 103 | 0.0342 |
| 104 | 104 | 0.343 |
| 105 | 105 | 0.498 |
| 106 | 106 | 0.00445 |
| 107 | 107 | 0.0592 |
| 108 | 108 | 0.632 |
| 109 | 109 | 0.14 |
| 11 | 11 | 0.0873 |
| 110 | 110 | 0.23 |
| 111 | 111 | 0.0138 |
| 112 | 112 | 0.0919 |
| 113 | 113 | 0.408 |
| 114 | 114 | 7.46577e-4 |
| 115 | 115 | 0.912 |
| 116 | 116 | 0.163 |
| 117 | 117 | 0.122 |
| 118 | 118 | 0.178 |
| 119 | 119 | 0.164 |
| 12 | 12 | 0.508 |
| 120 | 120 | 0.24 |
| 121 | 121 | 0.6 |
| 122 | 122 | 0.329 |
| 123 | 123 | 0.243 |
| 124 | 124 | 0.859 |
| 125 | 125 | 0.853 |
| 126 | 126 | 0.452 |
| 127 | 127 | 0.356 |
| 128 | 128 | 0.0478 |
| 129 | 129 | 0.569 |
| 13 | 13 | 0.261 |
| 130 | 130 | 0.73 |
| 131 | 131 | 0.795 |
| 132 | 132 | 0.997 |
| 133 | 133 | 0.373 |
| 134 | 134 | 0.979 |
| 135 | 135 | 0.00607 |
| 136 | 136 | 0.324 |
| 137 | 137 | 0.0222 |
| 138 | 138 | 0.845 |
| 139 | 139 | 0.122 |
| 14 | 14 | 0.813 |
| 140 | 140 | 0.0165 |
| 141 | 141 | 0.77 |
| 142 | 142 | 0.687 |
| 143 | 143 | 0.376 |
| 144 | 144 | 0.0287 |
| 145 | 145 | 0.121 |
| 146 | 146 | 0.321 |
| 147 | 147 | 0.721 |
| 148 | 148 | 0.024 |
| 149 | 149 | 0.0747 |
| 15 | 15 | 0.113 |
| 150 | 150 | 0.46 |
| 151 | 151 | 0.383 |
| 152 | 152 | 0.0781 |
| 153 | 153 | 0.374 |
| 154 | 154 | 0.88 |
| 155 | 155 | 0.798 |
| 156 | 156 | 0.272 |
| 157 | 157 | 0.676 |
| 158 | 158 | 0.763 |
| 159 | 159 | 0.0372 |
| 16 | 16 | 0.133 |
| 160 | 160 | 0.0783 |
| 161 | 161 | 0.329 |
| 162 | 162 | 0.776 |
| 163 | 163 | 0.854 |
| 164 | 164 | 0.0458 |
| 165 | 165 | 0.0679 |
| 166 | 166 | 0.332 |
| 167 | 167 | 0.652 |
| 168 | 168 | 0.0871 |
| 169 | 169 | 0.0137 |
| 17 | 17 | 0.25 |
| 18 | 18 | 0.28 |
| 19 | 19 | 0.182 |
| 2 | 2 | 0.76 |
| 20 | 20 | 0.945 |
| 21 | 21 | 0.166 |
| 22 | 22 | 0.174 |
| 23 | 23 | 0.02 |
| 24 | 24 | 0.141 |
| 25 | 25 | 0.719 |
| 26 | 26 | 0.0583 |
| 27 | 27 | 0.877 |
| 28 | 28 | 0.93 |
| 29 | 29 | 0.289 |
| 3 | 3 | 0.0302 |
| 30 | 30 | 0.865 |
| 31 | 31 | 0.494 |
| 32 | 32 | 7.34074e-4 |
| 33 | 33 | 0.701 |
| 34 | 34 | 0.483 |
| 35 | 35 | 0.126 |
| 36 | 36 | 0.0758 |
| 37 | 37 | 0.0571 |
| 38 | 38 | 0.379 |
| 39 | 39 | 0.0684 |
| 4 | 4 | 0.627 |
| 40 | 40 | 0.407 |
| 41 | 41 | 0.164 |
| 42 | 42 | 0.122 |
| 43 | 43 | 0.0903 |
| 44 | 44 | 0.493 |
| 45 | 45 | 0.552 |
| 46 | 46 | 0.0644 |
| 47 | 47 | 0.243 |
| 48 | 48 | 0.156 |
| 49 | 49 | 0.138 |
| 5 | 5 | 0.232 |
| 50 | 50 | 0.455 |
| 51 | 51 | 0.219 |
| 52 | 52 | 0.154 |
| 53 | 53 | 0.567 |
| 54 | 54 | 0.233 |
| 55 | 55 | 0.0474 |
| 56 | 56 | 0.564 |
| 57 | 57 | 0.286 |
| 58 | 58 | 0.146 |
| 59 | 59 | 0.0413 |
| 6 | 6 | 0.49 |
| 60 | 60 | 0.0461 |
| 61 | 61 | 0.685 |
| 62 | 62 | 0.0436 |
| 63 | 63 | 0.121 |
| 64 | 64 | 0.555 |
| 65 | 65 | 0.172 |
| 66 | 66 | 0.0945 |
| 67 | 67 | 0.543 |
| 68 | 68 | 0.94 |
| 69 | 69 | 0.874 |
| 7 | 7 | 0.462 |
| 70 | 70 | 0.0657 |
| 71 | 71 | 0.0678 |
| 72 | 72 | 0.434 |
| 73 | 73 | 0.0884 |
| 74 | 74 | 0.0484 |
| 75 | 75 | 0.184 |
| 76 | 76 | 0.651 |
| 77 | 77 | 0.0894 |
| 78 | 78 | 0.355 |
| 79 | 79 | 0.0324 |
| 8 | 8 | 0.0717 |
| 80 | 80 | 0.077 |
| 81 | 81 | 0.0897 |
| 82 | 82 | 0.0193 |
| 83 | 83 | 0.707 |
| 84 | 84 | 0.714 |
| 85 | 85 | 0.00313 |
| 86 | 86 | 0.176 |
| 87 | 87 | 0.872 |
| 88 | 88 | 0.427 |
| 89 | 89 | 0.0998 |
| 9 | 9 | 0.139 |
| 90 | 90 | 0.0365 |
| 91 | 91 | 0.162 |
| 92 | 92 | 0.0476 |
| 93 | 93 | 0.883 |
| 94 | 94 | 0.145 |
| 95 | 95 | 0.258 |
| 96 | 96 | 0.135 |
| 97 | 97 | 0.351 |
| 98 | 98 | 0.708 |
| 99 | 99 | 0.607 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11812
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100189 small cell lung cancer cell sample
FF:0102206 small cell lung cancer cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1324 (lung cancer)
305 (carcinoma)
1325 (bronchus cancer)
3905 (lung carcinoma)
5409 (lung small cell carcinoma)
3904 (bronchogenic carcinoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0100353 (lung cell line sample)
0102061 (bronchogenic carcinoma cell sample)
0101120 (epithelial cell line sample)
0100762 (lung cancer cell line sample)
0102206 (small cell lung cancer cell line sample)
0100189 (small cell lung cancer cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
