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(Created page with "{{f5samples |id=FF:10202-103F4 |name=submaxillary gland, adult, biol_rep1 |sample_id=10202 |rna_tube_id=103F4 |rna_box=103 |rna_position=F4 |sample_cell_lot=NA |sample...")
 
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{{f5samples
{{f5samples
|id=FF:10202-103F4
|DRA_sample_Accession=CAGE@SAMD00005592
|name=submaxillary gland, adult, biol_rep1
|accession_numbers=CAGE;DRX008733;DRR009605;DRZ001030;DRZ002415;DRZ012380;DRZ013765
|sample_id=10202
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001044,UBERON:0001736,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003293,UBERON:0003294,UBERON:0001829,UBERON:0002365,UBERON:0000464,UBERON:0002530,UBERON:0010047,UBERON:0003408,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0001041,UBERON:0000166,UBERON:0000167,UBERON:0002330
|rna_tube_id=103F4
|rna_box=103
|rna_position=F4
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Biochain
|rna_lot_number=
|rna_catalog_number=R1234165-10
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=24.00000
|sample_age=M
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=10.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs12852,LSID973,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000153,UBERON:0000161,UBERON:0000165,UBERON:0000166,UBERON:0000167,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000930,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001044,UBERON:0001048,UBERON:0001062,UBERON:0001444,UBERON:0001555,UBERON:0001736,UBERON:0001829,UBERON:0002050,UBERON:0002330,UBERON:0002365,UBERON:0002530,UBERON:0002532,UBERON:0002553,UBERON:0003104,UBERON:0003293,UBERON:0003294,UBERON:0003408,UBERON:0004111,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004921,UBERON:0005423,UBERON:0006298,UBERON:0007023,UBERON:0007026,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010202
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000165;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000166;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001044;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001829;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002365
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006595,UBERON:0006298,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/submaxillary%2520gland%252c%2520adult.CNhs12852.10202-103F4.hg38.nobarcode.ctss.bed.gz
|id=FF:10202-103F4
|is_a=EFO:0002091;;FF:0010202
|is_obsolete=
|library_id=CNhs12852
|library_id_phase_based=2:CNhs12852
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10202
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10202
|name=submaxillary gland, adult
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12852,LSID973,release012,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=103
|rna_catalog_number=R1234165-10
|rna_concentration=2.15
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=F4
|rna_rin=
|rna_sample_type=
|rna_tube_id=103F4
|rna_weight_ug=10
|sample_age=24
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=
|sample_company=Biochain
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.83198192308183e-226!GO:0005737;cytoplasm;6.79035395100161e-190!GO:0043226;organelle;1.23934879844473e-139!GO:0043229;intracellular organelle;2.97471063683898e-139!GO:0044444;cytoplasmic part;1.71882767540636e-134!GO:0043227;membrane-bound organelle;2.93909837417115e-128!GO:0043231;intracellular membrane-bound organelle;3.59309415362632e-128!GO:0044422;organelle part;2.28181004695246e-95!GO:0044446;intracellular organelle part;1.46178338220383e-93!GO:0005515;protein binding;6.8562708947755e-83!GO:0032991;macromolecular complex;1.83689196167293e-67!GO:0030529;ribonucleoprotein complex;6.44973389290442e-57!GO:0005739;mitochondrion;7.83769013928208e-57!GO:0003723;RNA binding;9.1231862526979e-51!GO:0031090;organelle membrane;2.16103749172905e-49!GO:0044237;cellular metabolic process;1.29170793061926e-46!GO:0043233;organelle lumen;1.29170793061926e-46!GO:0031974;membrane-enclosed lumen;1.29170793061926e-46!GO:0044238;primary metabolic process;3.38993792554835e-45!GO:0043170;macromolecule metabolic process;9.34181444340317e-43!GO:0033036;macromolecule localization;1.15891695899035e-40!GO:0044428;nuclear part;6.22599483222066e-40!GO:0044429;mitochondrial part;6.27733609215155e-40!GO:0015031;protein transport;1.32112623396464e-39!GO:0045184;establishment of protein localization;1.30358067050556e-38!GO:0008104;protein localization;1.32526595719344e-38!GO:0006412;translation;1.55173174293034e-37!GO:0005840;ribosome;7.15768860513491e-37!GO:0019538;protein metabolic process;2.06601930600607e-36!GO:0031967;organelle envelope;1.77601003857406e-35!GO:0031975;envelope;4.7232741281416e-35!GO:0043234;protein complex;1.30001901476233e-34!GO:0005634;nucleus;1.38106108875254e-33!GO:0044260;cellular macromolecule metabolic process;1.41132637044295e-32!GO:0009059;macromolecule biosynthetic process;1.56781231035317e-32!GO:0016043;cellular component organization and biogenesis;3.73936448351448e-32!GO:0003735;structural constituent of ribosome;1.7345548060466e-31!GO:0044267;cellular protein metabolic process;3.74833514433061e-31!GO:0009058;biosynthetic process;3.47874129721272e-29!GO:0033279;ribosomal subunit;4.06782630582643e-29!GO:0005829;cytosol;1.43784063258618e-28!GO:0006396;RNA processing;1.1430875257105e-27!GO:0016071;mRNA metabolic process;1.12161393665683e-26!GO:0046907;intracellular transport;1.34101163079428e-26!GO:0044249;cellular biosynthetic process;4.85717472426799e-26!GO:0005740;mitochondrial envelope;4.85717472426799e-26!GO:0006886;intracellular protein transport;8.36234892500065e-26!GO:0031966;mitochondrial membrane;2.81230544619701e-25!GO:0019866;organelle inner membrane;6.01718870309652e-25!GO:0008380;RNA splicing;1.18817276726342e-24!GO:0031981;nuclear lumen;2.77418540439071e-24!GO:0005743;mitochondrial inner membrane;3.06093801341235e-24!GO:0006119;oxidative phosphorylation;4.90892182917309e-23!GO:0006397;mRNA processing;2.29790389394195e-22!GO:0065003;macromolecular complex assembly;4.53577055633006e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.10743050288725e-22!GO:0010467;gene expression;2.9116777016519e-21!GO:0012505;endomembrane system;3.01985530838463e-21!GO:0022607;cellular component assembly;1.35886547825124e-20!GO:0043283;biopolymer metabolic process;5.85756342563476e-20!GO:0005783;endoplasmic reticulum;2.75922282182905e-19!GO:0005794;Golgi apparatus;7.8869632805363e-19!GO:0043228;non-membrane-bound organelle;3.41485915369619e-18!GO:0043232;intracellular non-membrane-bound organelle;3.41485915369619e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.72965277175593e-18!GO:0044445;cytosolic part;3.79998325129354e-18!GO:0016192;vesicle-mediated transport;4.51702138159779e-18!GO:0051649;establishment of cellular localization;5.47827799908825e-18!GO:0051641;cellular localization;5.76818120571757e-18!GO:0008092;cytoskeletal protein binding;6.99324641309061e-18!GO:0044455;mitochondrial membrane part;1.67525330986318e-17!GO:0008134;transcription factor binding;3.99340667677426e-17!GO:0031980;mitochondrial lumen;4.11799243626739e-17!GO:0005759;mitochondrial matrix;4.11799243626739e-17!GO:0005681;spliceosome;6.56177793413376e-17!GO:0005746;mitochondrial respiratory chain;7.60880794146505e-17!GO:0048193;Golgi vesicle transport;4.01451972111837e-16!GO:0005654;nucleoplasm;8.79623343571402e-16!GO:0048770;pigment granule;1.26093541188889e-15!GO:0042470;melanosome;1.26093541188889e-15!GO:0050136;NADH dehydrogenase (quinone) activity;3.17755434547219e-15!GO:0003954;NADH dehydrogenase activity;3.17755434547219e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.17755434547219e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.68715279595182e-15!GO:0015934;large ribosomal subunit;4.23070595027621e-15!GO:0015935;small ribosomal subunit;4.23826241385344e-15!GO:0022618;protein-RNA complex assembly;4.57382270754813e-15!GO:0044432;endoplasmic reticulum part;7.73510620834322e-15!GO:0044265;cellular macromolecule catabolic process;1.40214856378121e-14!GO:0006605;protein targeting;4.55649163953417e-14!GO:0006457;protein folding;1.21114014506263e-13!GO:0000166;nucleotide binding;1.69076901624584e-13!GO:0044451;nucleoplasm part;2.42787896335501e-13!GO:0006996;organelle organization and biogenesis;2.79073004631769e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;5.01068283833491e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.12952545876e-13!GO:0045271;respiratory chain complex I;5.12952545876e-13!GO:0005747;mitochondrial respiratory chain complex I;5.12952545876e-13!GO:0042775;organelle ATP synthesis coupled electron transport;7.99573240225472e-13!GO:0042773;ATP synthesis coupled electron transport;7.99573240225472e-13!GO:0019941;modification-dependent protein catabolic process;1.09321319536301e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.09321319536301e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.15985206453985e-12!GO:0044257;cellular protein catabolic process;1.25208491205823e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.6120715260128e-12!GO:0008135;translation factor activity, nucleic acid binding;1.6120715260128e-12!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.01406371722155e-12!GO:0044248;cellular catabolic process;2.13787739808144e-12!GO:0051186;cofactor metabolic process;3.84502486910952e-12!GO:0043285;biopolymer catabolic process;5.57680348962795e-12!GO:0006915;apoptosis;7.88987419362919e-12!GO:0012501;programmed cell death;8.57929047126493e-12!GO:0009057;macromolecule catabolic process;1.14695304884923e-11!GO:0016874;ligase activity;1.27911504051589e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.55590718695584e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.85716740313788e-11!GO:0006512;ubiquitin cycle;1.97000929307137e-11!GO:0005793;ER-Golgi intermediate compartment;3.35169883336218e-11!GO:0003779;actin binding;4.97844028175374e-11!GO:0006446;regulation of translational initiation;6.22268413768619e-11!GO:0019829;cation-transporting ATPase activity;6.32552410909135e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.39529781049411e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.0275188068076e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;8.07928965251516e-11!GO:0043412;biopolymer modification;9.32317081909238e-11!GO:0008219;cell death;1.0108682566115e-10!GO:0016265;death;1.0108682566115e-10!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.0390855524555e-10!GO:0005789;endoplasmic reticulum membrane;1.07951473814998e-10!GO:0005761;mitochondrial ribosome;1.08025802678768e-10!GO:0000313;organellar ribosome;1.08025802678768e-10!GO:0016462;pyrophosphatase activity;1.0924607234637e-10!GO:0016604;nuclear body;1.42203801211129e-10!GO:0051082;unfolded protein binding;1.57063150051455e-10!GO:0030163;protein catabolic process;1.67047125287755e-10!GO:0006413;translational initiation;2.0571336230199e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.05780864882902e-10!GO:0000502;proteasome complex (sensu Eukaryota);2.05780864882902e-10!GO:0003712;transcription cofactor activity;2.24479487917161e-10!GO:0005635;nuclear envelope;2.61511852938541e-10!GO:0015078;hydrogen ion transmembrane transporter activity;6.15860187552588e-10!GO:0016469;proton-transporting two-sector ATPase complex;6.52709010963332e-10!GO:0030036;actin cytoskeleton organization and biogenesis;6.77482151577464e-10!GO:0006732;coenzyme metabolic process;7.71432530426107e-10!GO:0006913;nucleocytoplasmic transport;8.89189508758072e-10!GO:0006464;protein modification process;9.13196170027597e-10!GO:0017111;nucleoside-triphosphatase activity;1.05156719278756e-09!GO:0006461;protein complex assembly;1.16130037828459e-09!GO:0009055;electron carrier activity;1.3404168139291e-09!GO:0008565;protein transporter activity;1.61670803331253e-09!GO:0051169;nuclear transport;1.89017920132422e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.00352324062083e-09!GO:0015986;ATP synthesis coupled proton transport;2.36122671593717e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.36122671593717e-09!GO:0016607;nuclear speck;2.57797999764796e-09!GO:0031982;vesicle;3.14061195523741e-09!GO:0003743;translation initiation factor activity;3.29141129059311e-09!GO:0017076;purine nucleotide binding;3.40764971047576e-09!GO:0005730;nucleolus;5.94973409931246e-09!GO:0005773;vacuole;7.46374185198428e-09!GO:0031965;nuclear membrane;7.64049303714113e-09!GO:0009141;nucleoside triphosphate metabolic process;7.87757806322867e-09!GO:0032553;ribonucleotide binding;7.87757806322867e-09!GO:0032555;purine ribonucleotide binding;7.87757806322867e-09!GO:0009259;ribonucleotide metabolic process;8.79223985160482e-09!GO:0031410;cytoplasmic vesicle;1.10803976059094e-08!GO:0015629;actin cytoskeleton;1.37484508776769e-08!GO:0030029;actin filament-based process;1.45505554312948e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.51347222858531e-08!GO:0000375;RNA splicing, via transesterification reactions;1.51347222858531e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.51347222858531e-08!GO:0009150;purine ribonucleotide metabolic process;1.52794022290563e-08!GO:0044431;Golgi apparatus part;1.54075740423586e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.63892326294647e-08!GO:0031988;membrane-bound vesicle;1.67708144059818e-08!GO:0006366;transcription from RNA polymerase II promoter;1.71585653135142e-08!GO:0045333;cellular respiration;1.77513699683578e-08!GO:0005768;endosome;2.00407843578915e-08!GO:0006163;purine nucleotide metabolic process;2.20242975929879e-08!GO:0009060;aerobic respiration;2.90646704044152e-08!GO:0046034;ATP metabolic process;3.17716521839264e-08!GO:0017038;protein import;3.45745534040647e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.74460883443253e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.08708626500581e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.08708626500581e-08!GO:0043687;post-translational protein modification;4.79097882220617e-08!GO:0016023;cytoplasmic membrane-bound vesicle;5.02552422505538e-08!GO:0009142;nucleoside triphosphate biosynthetic process;8.86238878100141e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.86238878100141e-08!GO:0006793;phosphorus metabolic process;1.28884484298039e-07!GO:0006796;phosphate metabolic process;1.28884484298039e-07!GO:0048523;negative regulation of cellular process;1.32636951620661e-07!GO:0006754;ATP biosynthetic process;1.34806893259545e-07!GO:0006753;nucleoside phosphate metabolic process;1.34806893259545e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.39141902704467e-07!GO:0030120;vesicle coat;1.41043697183229e-07!GO:0030662;coated vesicle membrane;1.41043697183229e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.56127925855134e-07!GO:0003676;nucleic acid binding;1.6796351261188e-07!GO:0009260;ribonucleotide biosynthetic process;1.72038972251718e-07!GO:0000323;lytic vacuole;1.95109902092593e-07!GO:0005764;lysosome;1.95109902092593e-07!GO:0016070;RNA metabolic process;2.02326014612075e-07!GO:0009056;catabolic process;2.18720220292635e-07!GO:0006164;purine nucleotide biosynthetic process;2.22221127366307e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.22670763383868e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.22670763383868e-07!GO:0009109;coenzyme catabolic process;2.33505972685817e-07!GO:0051246;regulation of protein metabolic process;2.90494118753672e-07!GO:0008639;small protein conjugating enzyme activity;2.98923340687582e-07!GO:0042981;regulation of apoptosis;3.63246900964671e-07!GO:0022890;inorganic cation transmembrane transporter activity;4.30230871058905e-07!GO:0030554;adenyl nucleotide binding;4.74979934040573e-07!GO:0007264;small GTPase mediated signal transduction;5.03550430408812e-07!GO:0004842;ubiquitin-protein ligase activity;5.21539621263603e-07!GO:0019899;enzyme binding;5.44469097500228e-07!GO:0043067;regulation of programmed cell death;6.12029415978872e-07!GO:0005524;ATP binding;6.9948815836001e-07!GO:0006099;tricarboxylic acid cycle;7.29562196127421e-07!GO:0046356;acetyl-CoA catabolic process;7.29562196127421e-07!GO:0051187;cofactor catabolic process;8.32584836154703e-07!GO:0031252;leading edge;8.32584836154703e-07!GO:0032559;adenyl ribonucleotide binding;8.9283590191519e-07!GO:0048475;coated membrane;9.02160808705452e-07!GO:0030117;membrane coat;9.02160808705452e-07!GO:0016564;transcription repressor activity;9.4957499855909e-07!GO:0019787;small conjugating protein ligase activity;1.09114126136144e-06!GO:0005770;late endosome;1.45058250477331e-06!GO:0016310;phosphorylation;1.67244735120824e-06!GO:0006084;acetyl-CoA metabolic process;1.9309102842509e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.9503066545975e-06!GO:0050789;regulation of biological process;2.13941653754309e-06!GO:0051789;response to protein stimulus;2.37492449278794e-06!GO:0006986;response to unfolded protein;2.37492449278794e-06!GO:0006606;protein import into nucleus;2.65384550285539e-06!GO:0048519;negative regulation of biological process;2.94590258618542e-06!GO:0005798;Golgi-associated vesicle;3.56910831479275e-06!GO:0000139;Golgi membrane;3.60431423720803e-06!GO:0006916;anti-apoptosis;3.64348479459722e-06!GO:0051170;nuclear import;3.73204577467467e-06!GO:0050794;regulation of cellular process;4.97822733418626e-06!GO:0016044;membrane organization and biogenesis;5.60846486627388e-06!GO:0015980;energy derivation by oxidation of organic compounds;6.25398848371408e-06!GO:0006613;cotranslational protein targeting to membrane;6.55885482801658e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.67299820041729e-06!GO:0051188;cofactor biosynthetic process;6.72003050593499e-06!GO:0044453;nuclear membrane part;6.79127623971647e-06!GO:0030133;transport vesicle;7.77097682195396e-06!GO:0045259;proton-transporting ATP synthase complex;8.72845557974447e-06!GO:0006091;generation of precursor metabolites and energy;9.45375091198381e-06!GO:0003713;transcription coactivator activity;1.14176994127585e-05!GO:0007265;Ras protein signal transduction;1.19652751602918e-05!GO:0006752;group transfer coenzyme metabolic process;1.20506370847799e-05!GO:0006259;DNA metabolic process;1.5132593929448e-05!GO:0003714;transcription corepressor activity;1.54788529116646e-05!GO:0016881;acid-amino acid ligase activity;1.66421021583519e-05!GO:0016887;ATPase activity;1.77400688566435e-05!GO:0042623;ATPase activity, coupled;2.20227980207404e-05!GO:0005788;endoplasmic reticulum lumen;2.64019752847898e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.73634653399186e-05!GO:0043069;negative regulation of programmed cell death;2.85809212379248e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.02964385789882e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.02964385789882e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.02964385789882e-05!GO:0043066;negative regulation of apoptosis;3.39096206327694e-05!GO:0015992;proton transport;3.54945978195485e-05!GO:0005643;nuclear pore;3.88380920062212e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.52931383677085e-05!GO:0006818;hydrogen transport;4.93716950337567e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.93716950337567e-05!GO:0006612;protein targeting to membrane;5.43632532963994e-05!GO:0016563;transcription activator activity;5.44387686454434e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.51219479917276e-05!GO:0065002;intracellular protein transport across a membrane;6.35270840540444e-05!GO:0009108;coenzyme biosynthetic process;6.59993029619249e-05!GO:0031324;negative regulation of cellular metabolic process;6.97042335601971e-05!GO:0005083;small GTPase regulator activity;7.74856372226986e-05!GO:0043038;amino acid activation;7.86296226074162e-05!GO:0006418;tRNA aminoacylation for protein translation;7.86296226074162e-05!GO:0043039;tRNA aminoacylation;7.86296226074162e-05!GO:0005762;mitochondrial large ribosomal subunit;9.343987191128e-05!GO:0000315;organellar large ribosomal subunit;9.343987191128e-05!GO:0008307;structural constituent of muscle;9.49586173522344e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.94417979383182e-05!GO:0044262;cellular carbohydrate metabolic process;0.000105616405115625!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000109834282674602!GO:0030532;small nuclear ribonucleoprotein complex;0.000111266523787535!GO:0042254;ribosome biogenesis and assembly;0.00011277047498747!GO:0044440;endosomal part;0.000113212449916281!GO:0010008;endosome membrane;0.000113212449916281!GO:0000245;spliceosome assembly;0.000122266678624491!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000136403619713629!GO:0004298;threonine endopeptidase activity;0.000185660679929854!GO:0016197;endosome transport;0.000186376816787932!GO:0019843;rRNA binding;0.000192252260719028!GO:0033116;ER-Golgi intermediate compartment membrane;0.00022161455500703!GO:0042802;identical protein binding;0.000231370157891735!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000233101634061453!GO:0030695;GTPase regulator activity;0.000241404740403983!GO:0007243;protein kinase cascade;0.000241404740403983!GO:0009892;negative regulation of metabolic process;0.000247579648719194!GO:0050657;nucleic acid transport;0.000251701225823439!GO:0051236;establishment of RNA localization;0.000251701225823439!GO:0050658;RNA transport;0.000251701225823439!GO:0043623;cellular protein complex assembly;0.000252298816471426!GO:0045045;secretory pathway;0.000308228316788477!GO:0043566;structure-specific DNA binding;0.000316498710448986!GO:0044449;contractile fiber part;0.000325814311625775!GO:0051427;hormone receptor binding;0.000356219476968174!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000358390767980202!GO:0015399;primary active transmembrane transporter activity;0.000358390767980202!GO:0006403;RNA localization;0.000362973447179293!GO:0006891;intra-Golgi vesicle-mediated transport;0.000369836295472862!GO:0016481;negative regulation of transcription;0.000370950106987005!GO:0051128;regulation of cellular component organization and biogenesis;0.00037960566216423!GO:0048471;perinuclear region of cytoplasm;0.000404913727903279!GO:0005769;early endosome;0.00040761364721784!GO:0008654;phospholipid biosynthetic process;0.000490764062768243!GO:0032940;secretion by cell;0.000505484591779842!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000508682775585503!GO:0001726;ruffle;0.000533909394735317!GO:0006399;tRNA metabolic process;0.000538160947238507!GO:0003924;GTPase activity;0.000612188248220649!GO:0000151;ubiquitin ligase complex;0.000656106531588964!GO:0007005;mitochondrion organization and biogenesis;0.000659919482850789!GO:0045786;negative regulation of progression through cell cycle;0.000659919482850789!GO:0006897;endocytosis;0.000659919482850789!GO:0010324;membrane invagination;0.000659919482850789!GO:0004386;helicase activity;0.00066837247741872!GO:0035257;nuclear hormone receptor binding;0.000676510528358368!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00069369993683572!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000718213956475653!GO:0016568;chromatin modification;0.000736636779312355!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000743734364462274!GO:0005741;mitochondrial outer membrane;0.000804803380313038!GO:0016740;transferase activity;0.000815753480241137!GO:0019867;outer membrane;0.000823899357217946!GO:0043021;ribonucleoprotein binding;0.000833690885067377!GO:0008026;ATP-dependent helicase activity;0.000839588000100015!GO:0046930;pore complex;0.000847331667608858!GO:0031968;organelle outer membrane;0.000865005169344266!GO:0065007;biological regulation;0.00088171782932607!GO:0032446;protein modification by small protein conjugation;0.00088789982624568!GO:0005525;GTP binding;0.000911636733561021!GO:0005774;vacuolar membrane;0.00099054444916545!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00101129587683571!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00101129587683571!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00101129587683571!GO:0045947;negative regulation of translational initiation;0.00101524153409396!GO:0001666;response to hypoxia;0.00108979348883067!GO:0004576;oligosaccharyl transferase activity;0.00113029852481387!GO:0016567;protein ubiquitination;0.00127513782333837!GO:0030658;transport vesicle membrane;0.00127513782333837!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00130004199924722!GO:0051920;peroxiredoxin activity;0.00131571687623929!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00134005858425221!GO:0005791;rough endoplasmic reticulum;0.00134005858425221!GO:0016491;oxidoreductase activity;0.00135703879570552!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00138872506932211!GO:0006650;glycerophospholipid metabolic process;0.00146405466660116!GO:0030134;ER to Golgi transport vesicle;0.00148839795627535!GO:0043292;contractile fiber;0.00152910989622159!GO:0048500;signal recognition particle;0.0015536437510595!GO:0009966;regulation of signal transduction;0.00156631853201916!GO:0048522;positive regulation of cellular process;0.00157559940468777!GO:0008250;oligosaccharyl transferase complex;0.00159790140511643!GO:0043492;ATPase activity, coupled to movement of substances;0.00163922686442551!GO:0003724;RNA helicase activity;0.00167219970205468!GO:0009117;nucleotide metabolic process;0.00167219970205468!GO:0005048;signal sequence binding;0.00167219970205468!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00178939231641403!GO:0006323;DNA packaging;0.00179088944427401!GO:0030127;COPII vesicle coat;0.00185823969256232!GO:0012507;ER to Golgi transport vesicle membrane;0.00185823969256232!GO:0031072;heat shock protein binding;0.00197281520714464!GO:0030027;lamellipodium;0.00206231946452422!GO:0050662;coenzyme binding;0.00209388322162426!GO:0046848;hydroxyapatite binding;0.00209388322162426!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00210100354336231!GO:0030867;rough endoplasmic reticulum membrane;0.00210444683362608!GO:0031032;actomyosin structure organization and biogenesis;0.00215149326098336!GO:0030016;myofibril;0.00216775751815454!GO:0051028;mRNA transport;0.00218835020072899!GO:0019904;protein domain specific binding;0.00227960367942656!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00234549274101198!GO:0007010;cytoskeleton organization and biogenesis;0.00244485966742202!GO:0005912;adherens junction;0.00245177385770148!GO:0016853;isomerase activity;0.00257093018941625!GO:0012506;vesicle membrane;0.00268012878745399!GO:0000314;organellar small ribosomal subunit;0.00274190201861418!GO:0005763;mitochondrial small ribosomal subunit;0.00274190201861418!GO:0048518;positive regulation of biological process;0.00276072068343281!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00280426035418596!GO:0003697;single-stranded DNA binding;0.00288325468637139!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00292543680600008!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00292685106024076!GO:0051287;NAD binding;0.00308529932042266!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00310855489722423!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00337192689569859!GO:0005885;Arp2/3 protein complex;0.00340467134183471!GO:0030659;cytoplasmic vesicle membrane;0.00340467134183471!GO:0005905;coated pit;0.0034801970816358!GO:0016859;cis-trans isomerase activity;0.00368554976114205!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00386658384035625!GO:0045047;protein targeting to ER;0.00386658384035625!GO:0044437;vacuolar part;0.00386658384035625!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00386658384035625!GO:0015002;heme-copper terminal oxidase activity;0.00386658384035625!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00386658384035625!GO:0004129;cytochrome-c oxidase activity;0.00386658384035625!GO:0030118;clathrin coat;0.0039097000048696!GO:0006414;translational elongation;0.00406055587424809!GO:0030176;integral to endoplasmic reticulum membrane;0.00418162628839423!GO:0030055;cell-matrix junction;0.00456586111269839!GO:0032561;guanyl ribonucleotide binding;0.00456586111269839!GO:0019001;guanyl nucleotide binding;0.00456586111269839!GO:0006892;post-Golgi vesicle-mediated transport;0.00465006557087157!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00476225833017878!GO:0045454;cell redox homeostasis;0.00476225833017878!GO:0030660;Golgi-associated vesicle membrane;0.00482618530652992!GO:0005667;transcription factor complex;0.00486429797018006!GO:0005096;GTPase activator activity;0.00493423524244864!GO:0008047;enzyme activator activity;0.00497558122013652!GO:0008312;7S RNA binding;0.00497674633299323!GO:0006518;peptide metabolic process;0.0050346448476858!GO:0046474;glycerophospholipid biosynthetic process;0.00506053363410806!GO:0003702;RNA polymerase II transcription factor activity;0.00514764563392562!GO:0019318;hexose metabolic process;0.00514764563392562!GO:0035258;steroid hormone receptor binding;0.00514764563392562!GO:0030663;COPI coated vesicle membrane;0.00517245632050275!GO:0030126;COPI vesicle coat;0.00517245632050275!GO:0005924;cell-substrate adherens junction;0.00546548784430119!GO:0007242;intracellular signaling cascade;0.00559848264506791!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00560714169638328!GO:0016072;rRNA metabolic process;0.0057437810256924!GO:0008287;protein serine/threonine phosphatase complex;0.0057437810256924!GO:0006364;rRNA processing;0.00597183542262146!GO:0005099;Ras GTPase activator activity;0.00603063375717263!GO:0006979;response to oxidative stress;0.00604709898708135!GO:0006417;regulation of translation;0.00622563793963233!GO:0051168;nuclear export;0.00651840165317508!GO:0006984;ER-nuclear signaling pathway;0.00651840165317508!GO:0030132;clathrin coat of coated pit;0.00653122969176713!GO:0046983;protein dimerization activity;0.00653165257139438!GO:0006402;mRNA catabolic process;0.00656967127407321!GO:0003690;double-stranded DNA binding;0.00672406085657438!GO:0006607;NLS-bearing substrate import into nucleus;0.00681825278445583!GO:0030137;COPI-coated vesicle;0.00711209154825697!GO:0008154;actin polymerization and/or depolymerization;0.00718182164808885!GO:0044433;cytoplasmic vesicle part;0.0071966038152988!GO:0005996;monosaccharide metabolic process;0.00738130446069652!GO:0048468;cell development;0.00767287016575502!GO:0005865;striated muscle thin filament;0.00805245388820181!GO:0030017;sarcomere;0.00821033667058831!GO:0005925;focal adhesion;0.00822870028705741!GO:0030041;actin filament polymerization;0.00863961794019923!GO:0018196;peptidyl-asparagine modification;0.00863961794019923!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00863961794019923!GO:0003746;translation elongation factor activity;0.00865954461846436!GO:0031902;late endosome membrane;0.00896521822896825!GO:0008361;regulation of cell size;0.00918597219519333!GO:0030140;trans-Golgi network transport vesicle;0.00931795375653923!GO:0045941;positive regulation of transcription;0.00945587886750434!GO:0045893;positive regulation of transcription, DNA-dependent;0.00950094988608907!GO:0043488;regulation of mRNA stability;0.00950244845957482!GO:0043487;regulation of RNA stability;0.00950244845957482!GO:0003729;mRNA binding;0.00950244845957482!GO:0043681;protein import into mitochondrion;0.0096029863108273!GO:0051087;chaperone binding;0.0101051761255946!GO:0008186;RNA-dependent ATPase activity;0.0105439704520343!GO:0051726;regulation of cell cycle;0.010926200402128!GO:0045892;negative regulation of transcription, DNA-dependent;0.0109522277585514!GO:0030384;phosphoinositide metabolic process;0.0113024535259799!GO:0005862;muscle thin filament tropomyosin;0.0113338515477058!GO:0016791;phosphoric monoester hydrolase activity;0.0114459040660657!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0115580484636192!GO:0051252;regulation of RNA metabolic process;0.0117440131276199!GO:0017022;myosin binding;0.0118346514465521!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0121212877130026!GO:0033043;regulation of organelle organization and biogenesis;0.0121212877130026!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.012734671525384!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.012734671525384!GO:0015631;tubulin binding;0.0129425920723381!GO:0016049;cell growth;0.0130362606523167!GO:0000074;regulation of progression through cell cycle;0.0130362606523167!GO:0033673;negative regulation of kinase activity;0.0130362606523167!GO:0006469;negative regulation of protein kinase activity;0.0130362606523167!GO:0051539;4 iron, 4 sulfur cluster binding;0.0130362606523167!GO:0007266;Rho protein signal transduction;0.0130362606523167!GO:0006401;RNA catabolic process;0.0142246634809416!GO:0017166;vinculin binding;0.0146379223623138!GO:0031326;regulation of cellular biosynthetic process;0.014760230649602!GO:0050811;GABA receptor binding;0.0149220689953909!GO:0030433;ER-associated protein catabolic process;0.015035068809539!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.015035068809539!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0151765028895106!GO:0030018;Z disc;0.0152125238050597!GO:0051540;metal cluster binding;0.0152369123046003!GO:0051536;iron-sulfur cluster binding;0.0152369123046003!GO:0016301;kinase activity;0.0176429176873579!GO:0008139;nuclear localization sequence binding;0.0176533495077052!GO:0004722;protein serine/threonine phosphatase activity;0.0176938914466494!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0178546856632175!GO:0030968;unfolded protein response;0.0182569673776253!GO:0001558;regulation of cell growth;0.0191681135869138!GO:0005765;lysosomal membrane;0.0198029282666525!GO:0005975;carbohydrate metabolic process;0.0204819272521923!GO:0009081;branched chain family amino acid metabolic process;0.0210198280190612!GO:0031529;ruffle organization and biogenesis;0.0210318162628884!GO:0016779;nucleotidyltransferase activity;0.021039824137414!GO:0030125;clathrin vesicle coat;0.0211727149962009!GO:0030665;clathrin coated vesicle membrane;0.0211727149962009!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0211727149962009!GO:0048037;cofactor binding;0.0212355712712476!GO:0016787;hydrolase activity;0.0219826137947781!GO:0043034;costamere;0.0221906593376925!GO:0051056;regulation of small GTPase mediated signal transduction;0.0223672821855484!GO:0007034;vacuolar transport;0.0226150805425854!GO:0008234;cysteine-type peptidase activity;0.0226993160448161!GO:0043284;biopolymer biosynthetic process;0.0228503304408951!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0234132804526802!GO:0043087;regulation of GTPase activity;0.0234150848930837!GO:0035035;histone acetyltransferase binding;0.0239034150977403!GO:0007006;mitochondrial membrane organization and biogenesis;0.0241543438537831!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0249133853592391!GO:0046489;phosphoinositide biosynthetic process;0.0252198175584255!GO:0046467;membrane lipid biosynthetic process;0.0253595295709536!GO:0006611;protein export from nucleus;0.0257475417850194!GO:0004004;ATP-dependent RNA helicase activity;0.0258663712266007!GO:0060090;molecular adaptor activity;0.02624840433081!GO:0007049;cell cycle;0.0267379148633803!GO:0009083;branched chain family amino acid catabolic process;0.0267379148633803!GO:0006465;signal peptide processing;0.0267542161162827!GO:0005869;dynactin complex;0.0269010043100443!GO:0051348;negative regulation of transferase activity;0.0269551048956845!GO:0008286;insulin receptor signaling pathway;0.027541437082715!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0280980579995268!GO:0042581;specific granule;0.0282891844030067!GO:0000059;protein import into nucleus, docking;0.0286804832342695!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0290169238267418!GO:0042805;actinin binding;0.0297809132126567!GO:0048487;beta-tubulin binding;0.0299717049785187!GO:0016363;nuclear matrix;0.0299717049785187!GO:0046578;regulation of Ras protein signal transduction;0.0299717049785187!GO:0030832;regulation of actin filament length;0.0299717049785187!GO:0006376;mRNA splice site selection;0.0301076429199798!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0301076429199798!GO:0051235;maintenance of localization;0.0301076429199798!GO:0005856;cytoskeleton;0.0301930148612682!GO:0006974;response to DNA damage stimulus;0.0306740669087679!GO:0016584;nucleosome positioning;0.0306944549596228!GO:0004721;phosphoprotein phosphatase activity;0.0314667028471657!GO:0030031;cell projection biogenesis;0.0320163227927554!GO:0030518;steroid hormone receptor signaling pathway;0.032610344674662!GO:0031628;opioid receptor binding;0.032700912604677!GO:0031852;mu-type opioid receptor binding;0.032700912604677!GO:0032535;regulation of cellular component size;0.0332079479502914!GO:0007030;Golgi organization and biogenesis;0.0335706988712948!GO:0005813;centrosome;0.0337110683499431!GO:0006595;polyamine metabolic process;0.0342266411965967!GO:0008017;microtubule binding;0.0346672040875898!GO:0009967;positive regulation of signal transduction;0.035120691929644!GO:0001725;stress fiber;0.035544764012665!GO:0032432;actin filament bundle;0.035544764012665!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0361446832434477!GO:0031327;negative regulation of cellular biosynthetic process;0.036715758065326!GO:0006354;RNA elongation;0.0367822393939861!GO:0006635;fatty acid beta-oxidation;0.0373177337430647!GO:0004300;enoyl-CoA hydratase activity;0.0373610644737765!GO:0031674;I band;0.0374608715870476!GO:0055001;muscle cell development;0.0376856117428147!GO:0030239;myofibril assembly;0.0376856117428147!GO:0055002;striated muscle cell development;0.0376856117428147!GO:0048154;S100 beta binding;0.0380408617211441!GO:0065004;protein-DNA complex assembly;0.0380408617211441!GO:0030880;RNA polymerase complex;0.0381170331786691!GO:0030666;endocytic vesicle membrane;0.0382301100492214!GO:0051276;chromosome organization and biogenesis;0.0383858295242822!GO:0006333;chromatin assembly or disassembly;0.0401593173639672!GO:0031625;ubiquitin protein ligase binding;0.0402636921425005!GO:0009165;nucleotide biosynthetic process;0.0407458356640396!GO:0051248;negative regulation of protein metabolic process;0.0407458356640396!GO:0032594;protein transport within lipid bilayer;0.0407458356640396!GO:0032907;transforming growth factor-beta3 production;0.0407458356640396!GO:0032596;protein transport into lipid raft;0.0407458356640396!GO:0032910;regulation of transforming growth factor-beta3 production;0.0407458356640396!GO:0032595;B cell receptor transport within lipid bilayer;0.0407458356640396!GO:0033606;chemokine receptor transport within lipid bilayer;0.0407458356640396!GO:0032600;chemokine receptor transport out of lipid raft;0.0407458356640396!GO:0032599;protein transport out of lipid raft;0.0407458356640396!GO:0032597;B cell receptor transport into lipid raft;0.0407458356640396!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0407458356640396!GO:0031901;early endosome membrane;0.0408503063625128!GO:0030135;coated vesicle;0.0413581603858512!GO:0043065;positive regulation of apoptosis;0.0413802859728554!GO:0045730;respiratory burst;0.0424403888741606!GO:0006950;response to stress;0.0424639914198892!GO:0005720;nuclear heterochromatin;0.0425632396022151!GO:0016836;hydro-lyase activity;0.0440215165639739!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0441879264445644!GO:0010257;NADH dehydrogenase complex assembly;0.0441879264445644!GO:0033108;mitochondrial respiratory chain complex assembly;0.0441879264445644!GO:0005784;translocon complex;0.0441879264445644!GO:0033176;proton-transporting V-type ATPase complex;0.0443834759371229!GO:0016471;vacuolar proton-transporting V-type ATPase complex;0.0443834759371229!GO:0046822;regulation of nucleocytoplasmic transport;0.0449110291289245!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0462023695325253!GO:0030119;AP-type membrane coat adaptor complex;0.0463652685066555!GO:0006509;membrane protein ectodomain proteolysis;0.0464574600853061!GO:0033619;membrane protein proteolysis;0.0464574600853061!GO:0043022;ribosome binding;0.0475040599156396!GO:0065009;regulation of a molecular function;0.048184215118773!GO:0009615;response to virus;0.0484165456682399!GO:0019511;peptidyl-proline hydroxylation;0.0499719294235402!GO:0018208;peptidyl-proline modification;0.0499719294235402!GO:0019471;4-hydroxyproline metabolic process;0.0499719294235402!GO:0018401;peptidyl-proline hydroxylation to 4-hydroxy-L-proline;0.0499719294235402
|sample_id=10202
|sample_note=
|sample_sex=M
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10202-103F4;search_select_hide=table117:FF:10202-103F4
}}
}}

Latest revision as of 13:56, 3 June 2020

Name:submaxillary gland, adult
Species:Human (Homo sapiens)
Library ID:CNhs12852
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexM
age24
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationNA
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberR1234165-10
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005592
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12852 CAGE DRX008733 DRR009605
Accession ID Hg19

Library idBAMCTSS
CNhs12852 DRZ001030 DRZ002415
Accession ID Hg38

Library idBAMCTSS
CNhs12852 DRZ012380 DRZ013765
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0288
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.367
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.164
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0529
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.156
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.164
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.209
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.283
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed1.014
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary1.079
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.903
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.164
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.505
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.264
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0.164
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.164
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.164
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.536
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.164
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.164
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0.164
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea1.276
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.164
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.368
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0.082
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12852

Jaspar motifP-value
MA0002.20.5
MA0003.10.116
MA0004.10.294
MA0006.10.124
MA0007.10.447
MA0009.10.441
MA0014.10.886
MA0017.10.352
MA0018.23.49115e-6
MA0019.10.314
MA0024.15.94766e-4
MA0025.10.292
MA0027.10.913
MA0028.15.56928e-4
MA0029.10.449
MA0030.10.275
MA0031.10.54
MA0035.20.397
MA0038.10.0385
MA0039.20.198
MA0040.10.844
MA0041.10.803
MA0042.10.873
MA0043.15.46074e-5
MA0046.10.144
MA0047.20.149
MA0048.18.96801e-5
MA0050.10.965
MA0051.10.55
MA0052.14.54366e-5
MA0055.12.76599e-4
MA0057.10.475
MA0058.10.0576
MA0059.10.092
MA0060.11.03488e-4
MA0061.10.0161
MA0062.21.20363e-4
MA0065.20.862
MA0066.10.311
MA0067.16.96609e-4
MA0068.10.521
MA0069.10.735
MA0070.10.306
MA0071.10.708
MA0072.10.202
MA0073.10.775
MA0074.10.953
MA0076.13.121e-4
MA0077.10.477
MA0078.10.374
MA0079.20.126
MA0080.20.669
MA0081.19.67582e-4
MA0083.10.712
MA0084.10.845
MA0087.10.112
MA0088.10.277
MA0090.10.959
MA0091.10.261
MA0092.10.985
MA0093.10.243
MA0099.22.09223e-25
MA0100.10.0051
MA0101.10.00182
MA0102.20.165
MA0103.11.59246e-7
MA0104.20.00764
MA0105.12.09783e-4
MA0106.10.168
MA0107.10.00413
MA0108.20.00615
MA0111.10.538
MA0112.20.00984
MA0113.10.885
MA0114.10.653
MA0115.10.478
MA0116.10.22
MA0117.10.0885
MA0119.10.435
MA0122.10.71
MA0124.10.745
MA0125.10.885
MA0131.10.0541
MA0135.10.446
MA0136.10.154
MA0137.20.325
MA0138.20.2
MA0139.10.815
MA0140.10.124
MA0141.10.137
MA0142.10.635
MA0143.10.391
MA0144.10.989
MA0145.10.00976
MA0146.10.397
MA0147.10.00628
MA0148.10.305
MA0149.10.168
MA0150.11.36508e-7
MA0152.10.159
MA0153.10.488
MA0154.10.96
MA0155.10.323
MA0156.10.227
MA0157.10.941
MA0159.10.569
MA0160.10.403
MA0162.10.406
MA0163.10.00248
MA0164.10.465
MA0258.10.0546
MA0259.10.0762



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12852

Novel motifP-value
10.873
100.0502
1000.749
1010.791
1020.596
1030.93
1040.161
1050.0546
1060.41
1070.0477
1080.1
1090.381
110.807
1100.465
1110.659
1120.158
1130.469
1140.817
1150.622
1160.271
1170.14
1180.0843
1190.159
120.316
1200.068
1210.994
1220.51
1230.545
1240.521
1250.788
1260.0875
1270.369
1280.0691
1290.616
130.461
1300.445
1310.866
1320.0584
1330.232
1340.0156
1350.867
1360.81
1370.509
1380.343
1390.212
140.446
1400.4
1410.431
1420.978
1430.419
1440.569
1450.314
1460.0846
1470.689
1480.628
1490.298
150.454
1500.985
1510.578
1520.205
1530.685
1540.814
1550.924
1560.329
1570.845
1580.461
1590.0285
160.619
1600.666
1610.637
1620.214
1630.257
1640.277
1650.719
1660.673
1670.0445
1680.301
1690.1
170.679
180.353
190.245
20.0149
200.0122
210.842
220.755
230.591
240.531
250.884
260.82
270.214
280.958
290.297
30.601
300.007
310.572
320.68
330.94
340.713
350.675
360.00384
370.487
380.524
390.413
40.575
400.153
410.0923
420.411
430.941
440.106
450.134
460.935
470.726
480.904
490.605
50.336
500.723
510.81
520.193
530.982
540.904
550.45
560.754
570.758
580.559
590.198
60.433
600.313
610.55
620.888
630.387
640.85
650.516
660.103
670.502
680.274
690.394
70.823
700.311
710.246
720.362
730.757
740.901
750.15
760.117
770.00191
780.277
790.66
80.667
800.956
810.0467
820.657
830.476
840.638
850.0536
860.693
870.973
880.704
890.181
90.912
900.892
910.668
920.395
930.204
940.0659
950.0342
960.283
970.218
980.593
990.234



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12852


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001044 (saliva-secreting gland)
0001736 (submandibular gland)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0001444 (subdivision of head)
0002553 (anatomical cavity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003293 (gland of oral region)
0003294 (gland of foregut)
0001829 (major salivary gland)
0002365 (exocrine gland)
0000464 (anatomical space)
0002530 (gland)
0010047 (oral gland)
0003408 (gland of gut)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0001041 (foregut)
0000166 (oral opening)
0000167 (oral cavity)
0002330 (exocrine system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010202 (human submaxillary gland - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006595 (presumptive endoderm)
UBERON:0006298 (submandibular gland primordium)
UBERON:0010316 (germ layer / neural crest)

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