FF:10189-103D9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005897 | ||
|accession_numbers=CAGE;DRX008620;DRR009492;DRZ000917;DRZ002302;DRZ012267;DRZ013652 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001155,UBERON:0001154,UBERON:0000160,UBERON:0001153,UBERON:0000479,UBERON:0001007,UBERON:0000064,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009854,UBERON:0010317,UBERON:0009856,UBERON:0001555,UBERON:0000059,UBERON:0005409,UBERON:0004907 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010189 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr11:111249993..111250006,-!p1@POU2AF1!2.31!201.41!POU2AF1;;chr19:50922187..50922204,+!p1@SPIB!2.24!173.23!SPIB;;chr16:85932760..85932775,+!p1@IRF8!2.13!135.10!IRF8;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!2.03!104.99!MEF2B;;chr6:391743..391759,+!p1@IRF4!1.91!79.57!IRF4;;chr11:47400078..47400106,-!p1@SPI1!1.80!61.61!SPI1;;chr20:50159198..50159299,-!p1@NFATC2!1.67!65.76!NFATC2;;chr6:134210243..134210257,+!p1@TCF21!1.67!45.31!TCF21;;chr1:201979743..201979762,+!p1@ELF3!1.63!42.00!ELF3;;chr2:100759010..100759035,-!p1@AFF3!1.62!40.61!AFF3;;chr2:100759037..100759058,-!p2@AFF3!1.61!40.06!AFF3;;chrY:21906594..21906622,-!p1@KDM5D!1.60!39.23!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.60!38.96!SP140;;chr5:149546334..149546364,+!p1@CDX1!1.59!37.85!CDX1;;chr16:86544113..86544145,+!p1@FOXF1!1.57!44.76!FOXF1;;chr20:50179368..50179392,-!p2@NFATC2!1.56!45.59!NFATC2;;chr20:62680984..62680999,-!p1@SOX18!1.55!45.59!SOX18;;chr11:34642612..34642646,+!p1@EHF!1.54!33.98!EHF;;chr17:46682321..46682362,-!p1@HOXB6!1.53!32.88!HOXB6;;chr2:68592406..68592424,+!p1@PLEK!1.52!31.77!PLEK;;chr12:52445218..52445237,+!p1@NR4A1!1.51!375.19!NR4A1;;chr3:12330560..12330579,+!p1@PPARG!1.51!35.64!PPARG;;chr13:28543431..28543487,-!p1@CDX2!1.50!30.39!CDX2;;chr19:46801639..46801699,+!p1@HIF3A!1.50!30.39!HIF3A;;chr17:38020557..38020572,-!p4@IKZF3!1.50!30.39!IKZF3;;chr7:50348268..50348366,+!p4@IKZF1!1.49!30.11!IKZF1;;chr19:42636586..42636607,-!p1@POU2F2!1.48!78.74!POU2F2;;chr4:174451370..174451387,-!p1@HAND2!1.48!29.29!HAND2;;chr5:133451294..133451310,+!p2@TCF7!1.47!28.46!TCF7;;chr2:231090471..231090504,+!p2@SP140!1.47!28.18!SP140;;chr6:91006518..91006570,-!p1@BACH2!1.46!63.27!BACH2;;chr9:117150254..117150271,-!p1@AKNA!1.43!68.52!AKNA;;chr17:38020392..38020477,-!p1@IKZF3!1.40!24.31!IKZF3;;chr8:55370487..55370503,+!p1@SOX17!1.36!22.10!SOX17;;chr5:88120151..88120177,-!p6@MEF2C!1.36!21.83!MEF2C;;chr19:45971246..45971265,+!p1@FOSB!1.35!388.18!FOSB;;chr5:88178983..88179012,-!p1@MEF2C!1.35!160.80!MEF2C;;chr9:37034186..37034216,-!p2@PAX5!1.35!21.27!PAX5;;chr7:27192185..27192209,-!p1@HOXA3!1.34!21.00!HOXA3;;chr7:50343634..50343717,+!p2@IKZF1!1.34!20.72!IKZF1;;chr8:60031619..60031676,-!p1@TOX!1.33!43.10!TOX;;chr11:113930425..113930471,+!p1@ZBTB16!1.30!27.08!ZBTB16;;chr1:25291475..25291511,-!p2@RUNX3!1.30!18.79!RUNX3;;chr16:79634624..79634642,-!p1@MAF!1.28!69.90!MAF;;chr6:91006575..91006602,-!p2@BACH2!1.28!26.80!BACH2;;chr20:42984330..42984364,+!p2@HNF4A!1.28!18.23!HNF4A;;chr4:111544219..111544240,-!p1@PITX2!1.28!17.96!PITX2;;chr18:77155922..77155939,+!p1@NFATC1!1.27!47.24!NFATC1;;chr17:37934204..37934241,-!p3@IKZF3!1.25!16.85!IKZF3;;chr12:52437488..52437507,+!p2@NR4A1!1.24!16.58!NR4A1;;chr6:106534192..106534224,+!p1@PRDM1!1.21!42.27!PRDM1;;chr1:40105299..40105326,-!p1@HEYL!1.19!14.64!HEYL;;chr7:50344289..50344323,+!p1@IKZF1!1.19!14.37!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.18!19.62!FOXP1;;chr4:111558135..111558198,-!p2@PITX2!1.18!14.09!PITX2;;chr17:37934365..37934387,-!p2@IKZF3!1.18!14.09!IKZF3;;chr8:76319876..76319926,+!p1@HNF4G!1.16!13.54!HNF4G;;chr16:79634595..79634620,-!p2@MAF!1.15!23.76!MAF;;chr4:149363494..149363543,-!p1@NR3C2!1.15!13.26!NR3C2;;chrX:49121165..49121179,-!p1@FOXP3!1.15!13.26!FOXP3;;chr9:37034469..37034474,-!p1@PAX5!1.15!13.26!PAX5;;chr2:145277882..145277967,-!p3@ZEB2!1.14!22.38!ZEB2;;chr19:13213662..13213686,-!p1@LYL1!1.13!18.51!LYL1;;chr5:133450365..133450444,+!p1@TCF7!1.12!55.53!TCF7;;chr13:28543285..28543314,-!p2@CDX2!1.12!12.16!CDX2;;chr4:109087445..109087463,-!p1@LEF1!1.12!12.16!LEF1;;chr1:25256756..25256774,-!p1@RUNX3!1.11!22.38!RUNX3;;chr10:101292684..101292706,+!p1@NKX2-3!1.11!11.88!NKX2-3;;chr21:39870339..39870443,-!p1@ERG!1.10!11.60!ERG;;chr14:75745523..75745537,+!p1@FOS!1.09!1351.86!FOS;;chr1:201979703..201979721,+!p2@ELF3!1.09!11.33!ELF3;;chr13:73633131..73633149,+!p1@KLF5!1.08!118.25!KLF5;;chr9:102584159..102584174,+!p2@NR4A3!1.08!19.89!NR4A3;;chr2:60778035..60778060,-!p4@BCL11A!1.08!13.26!BCL11A;;chr2:60781201..60781258,-!p3@BCL11A!1.08!11.05!BCL11A;;chr5:158526756..158526797,-!p3@EBF1!1.08!11.05!EBF1;;chr7:50344251..50344288,+!p3@IKZF1!1.08!11.05!IKZF1;;chr8:86099884..86099918,+!p4@E2F5!1.08!11.05!E2F5;;chr13:41593425..41593480,-!p1@ELF1!1.07!68.52!ELF1;;chr6:135502501..135502546,+!p1@MYB!1.07!12.99!MYB;;chr2:122042770..122042785,-!p1@TFCP2L1!1.07!10.78!TFCP2L1;;chr11:128392273..128392308,-!p2@ETS1!1.06!45.03!ETS1;;chr22:38380543..38380569,-!p1@SOX10!1.06!10.50!SOX10;;chr17:38020516..38020544,-!p5@IKZF3!1.06!10.50!IKZF3;;chr13:72441315..72441454,-!p1@DACH1!1.05!20.72!DACH1;;chr3:63953435..63953499,+!p1@ATXN7!1.05!10.22!ATXN7;;chr7:50343895..50343936,+!p5@IKZF1!1.05!10.22!IKZF1;;chrY:21906761..21906810,-!p2@KDM5D!1.05!10.22!KDM5D;;chr5:134369879..134369898,-!p2@PITX1!1.04!9.95!PITX1;;chr11:34642656..34642667,+!p2@EHF!1.03!9.67!EHF;;chr3:18486354..18486377,-!p2@SATB1!1.01!11.60!SATB1;;chr5:153857778..153857794,-!p1@HAND1!1.01!9.12!HAND1;;chr3:169381420..169381535,-!p1@MECOM!1.00!1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| |expression_enrichment_score=chr11:111249993..111250006,-!p1@POU2AF1!2.31!201.41!POU2AF1;;chr19:50922187..50922204,+!p1@SPIB!2.24!173.23!SPIB;;chr16:85932760..85932775,+!p1@IRF8!2.13!135.10!IRF8;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!2.03!104.99!MEF2B;;chr6:391743..391759,+!p1@IRF4!1.91!79.57!IRF4;;chr11:47400078..47400106,-!p1@SPI1!1.80!61.61!SPI1;;chr20:50159198..50159299,-!p1@NFATC2!1.67!65.76!NFATC2;;chr6:134210243..134210257,+!p1@TCF21!1.67!45.31!TCF21;;chr1:201979743..201979762,+!p1@ELF3!1.63!42.00!ELF3;;chr2:100759010..100759035,-!p1@AFF3!1.62!40.61!AFF3;;chr2:100759037..100759058,-!p2@AFF3!1.61!40.06!AFF3;;chrY:21906594..21906622,-!p1@KDM5D!1.60!39.23!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.60!38.96!SP140;;chr5:149546334..149546364,+!p1@CDX1!1.59!37.85!CDX1;;chr16:86544113..86544145,+!p1@FOXF1!1.57!44.76!FOXF1;;chr20:50179368..50179392,-!p2@NFATC2!1.56!45.59!NFATC2;;chr20:62680984..62680999,-!p1@SOX18!1.55!45.59!SOX18;;chr11:34642612..34642646,+!p1@EHF!1.54!33.98!EHF;;chr17:46682321..46682362,-!p1@HOXB6!1.53!32.88!HOXB6;;chr2:68592406..68592424,+!p1@PLEK!1.52!31.77!PLEK;;chr12:52445218..52445237,+!p1@NR4A1!1.51!375.19!NR4A1;;chr3:12330560..12330579,+!p1@PPARG!1.51!35.64!PPARG;;chr13:28543431..28543487,-!p1@CDX2!1.50!30.39!CDX2;;chr19:46801639..46801699,+!p1@HIF3A!1.50!30.39!HIF3A;;chr17:38020557..38020572,-!p4@IKZF3!1.50!30.39!IKZF3;;chr7:50348268..50348366,+!p4@IKZF1!1.49!30.11!IKZF1;;chr19:42636586..42636607,-!p1@POU2F2!1.48!78.74!POU2F2;;chr4:174451370..174451387,-!p1@HAND2!1.48!29.29!HAND2;;chr5:133451294..133451310,+!p2@TCF7!1.47!28.46!TCF7;;chr2:231090471..231090504,+!p2@SP140!1.47!28.18!SP140;;chr6:91006518..91006570,-!p1@BACH2!1.46!63.27!BACH2;;chr9:117150254..117150271,-!p1@AKNA!1.43!68.52!AKNA;;chr17:38020392..38020477,-!p1@IKZF3!1.40!24.31!IKZF3;;chr8:55370487..55370503,+!p1@SOX17!1.36!22.10!SOX17;;chr5:88120151..88120177,-!p6@MEF2C!1.36!21.83!MEF2C;;chr19:45971246..45971265,+!p1@FOSB!1.35!388.18!FOSB;;chr5:88178983..88179012,-!p1@MEF2C!1.35!160.80!MEF2C;;chr9:37034186..37034216,-!p2@PAX5!1.35!21.27!PAX5;;chr7:27192185..27192209,-!p1@HOXA3!1.34!21.00!HOXA3;;chr7:50343634..50343717,+!p2@IKZF1!1.34!20.72!IKZF1;;chr8:60031619..60031676,-!p1@TOX!1.33!43.10!TOX;;chr11:113930425..113930471,+!p1@ZBTB16!1.30!27.08!ZBTB16;;chr1:25291475..25291511,-!p2@RUNX3!1.30!18.79!RUNX3;;chr16:79634624..79634642,-!p1@MAF!1.28!69.90!MAF;;chr6:91006575..91006602,-!p2@BACH2!1.28!26.80!BACH2;;chr20:42984330..42984364,+!p2@HNF4A!1.28!18.23!HNF4A;;chr4:111544219..111544240,-!p1@PITX2!1.28!17.96!PITX2;;chr18:77155922..77155939,+!p1@NFATC1!1.27!47.24!NFATC1;;chr17:37934204..37934241,-!p3@IKZF3!1.25!16.85!IKZF3;;chr12:52437488..52437507,+!p2@NR4A1!1.24!16.58!NR4A1;;chr6:106534192..106534224,+!p1@PRDM1!1.21!42.27!PRDM1;;chr1:40105299..40105326,-!p1@HEYL!1.19!14.64!HEYL;;chr7:50344289..50344323,+!p1@IKZF1!1.19!14.37!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.18!19.62!FOXP1;;chr4:111558135..111558198,-!p2@PITX2!1.18!14.09!PITX2;;chr17:37934365..37934387,-!p2@IKZF3!1.18!14.09!IKZF3;;chr8:76319876..76319926,+!p1@HNF4G!1.16!13.54!HNF4G;;chr16:79634595..79634620,-!p2@MAF!1.15!23.76!MAF;;chr4:149363494..149363543,-!p1@NR3C2!1.15!13.26!NR3C2;;chrX:49121165..49121179,-!p1@FOXP3!1.15!13.26!FOXP3;;chr9:37034469..37034474,-!p1@PAX5!1.15!13.26!PAX5;;chr2:145277882..145277967,-!p3@ZEB2!1.14!22.38!ZEB2;;chr19:13213662..13213686,-!p1@LYL1!1.13!18.51!LYL1;;chr5:133450365..133450444,+!p1@TCF7!1.12!55.53!TCF7;;chr13:28543285..28543314,-!p2@CDX2!1.12!12.16!CDX2;;chr4:109087445..109087463,-!p1@LEF1!1.12!12.16!LEF1;;chr1:25256756..25256774,-!p1@RUNX3!1.11!22.38!RUNX3;;chr10:101292684..101292706,+!p1@NKX2-3!1.11!11.88!NKX2-3;;chr21:39870339..39870443,-!p1@ERG!1.10!11.60!ERG;;chr14:75745523..75745537,+!p1@FOS!1.09!1351.86!FOS;;chr1:201979703..201979721,+!p2@ELF3!1.09!11.33!ELF3;;chr13:73633131..73633149,+!p1@KLF5!1.08!118.25!KLF5;;chr9:102584159..102584174,+!p2@NR4A3!1.08!19.89!NR4A3;;chr2:60778035..60778060,-!p4@BCL11A!1.08!13.26!BCL11A;;chr2:60781201..60781258,-!p3@BCL11A!1.08!11.05!BCL11A;;chr5:158526756..158526797,-!p3@EBF1!1.08!11.05!EBF1;;chr7:50344251..50344288,+!p3@IKZF1!1.08!11.05!IKZF1;;chr8:86099884..86099918,+!p4@E2F5!1.08!11.05!E2F5;;chr13:41593425..41593480,-!p1@ELF1!1.07!68.52!ELF1;;chr6:135502501..135502546,+!p1@MYB!1.07!12.99!MYB;;chr2:122042770..122042785,-!p1@TFCP2L1!1.07!10.78!TFCP2L1;;chr11:128392273..128392308,-!p2@ETS1!1.06!45.03!ETS1;;chr22:38380543..38380569,-!p1@SOX10!1.06!10.50!SOX10;;chr17:38020516..38020544,-!p5@IKZF3!1.06!10.50!IKZF3;;chr13:72441315..72441454,-!p1@DACH1!1.05!20.72!DACH1;;chr3:63953435..63953499,+!p1@ATXN7!1.05!10.22!ATXN7;;chr7:50343895..50343936,+!p5@IKZF1!1.05!10.22!IKZF1;;chrY:21906761..21906810,-!p2@KDM5D!1.05!10.22!KDM5D;;chr5:134369879..134369898,-!p2@PITX1!1.04!9.95!PITX1;;chr11:34642656..34642667,+!p2@EHF!1.03!9.67!EHF;;chr3:18486354..18486377,-!p2@SATB1!1.01!11.60!SATB1;;chr5:153857778..153857794,-!p1@HAND1!1.01!9.12!HAND1;;chr3:169381420..169381535,-!p1@MECOM!1.00!10.50!MECOM;;chr22:29196433..29196445,-!p4@XBP1!1.00!9.95!XBP1;;chr18:52989031..52989079,-!p2@TCF4!0.99!21.27!TCF4;;chr2:100758991..100759009,-!p3@AFF3!0.99!8.84!AFF3;;chr5:71803177..71803255,-!p1@ZNF366!0.99!8.84!ZNF366;;chr13:28543253..28543276,-!p5@CDX2!0.99!8.84!CDX2;;chr19:33793430..33793447,-!p1@CEBPA!0.98!37.02!CEBPA;;chr19:19779619..19779670,+!p1@ZNF101!0.98!24.31!ZNF101;;chr17:53342311..53342400,+!p1@HLF!0.98!9.95!HLF;;chr22:41763452..41763466,+!p2@TEF!0.98!8.56!TEF;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.98!8.56!PEG3;;chr20:56195474..56195506,-!p1@ZBP1!0.97!8.29!ZBP1;;chrX:131623026..131623039,-!p5@MBNL3!0.97!8.29!MBNL3;;chr5:137801160..137801176,+!p1@EGR1!0.96!824.98!EGR1;;chr1:61548225..61548299,+!p1@NFIA!0.96!109.96!NFIA;;chr2:60780753..60780800,-!p1@BCL11A!0.95!40.34!BCL11A;;chr12:26277956..26277980,-!p1@BHLHE41!0.95!29.01!BHLHE41;;chr8:123793959..123793977,+!p4@ZHX2!0.95!15.75!ZHX2;;chr5:133451347..133451358,+!p3@TCF7!0.95!8.01!TCF7;;chr8:10588010..10588030,-!p1@SOX7!0.95!8.01!SOX7;;chr19:46367576..46367592,+!p1@FOXA3!0.95!8.01!FOXA3;;chr17:36105042..36105060,-!p1@HNF1B!0.95!8.01!HNF1B;;chr11:47400062..47400077,-!p2@SPI1!0.95!8.01!SPI1;;chr6:106534230..106534254,+!p2@PRDM1!0.94!20.17!PRDM1;;chr2:192015701..192015743,-!p1@STAT4!0.94!10.78!STAT4;;chr20:51588873..51588953,+!p1@TSHZ2!0.94!10.22!TSHZ2;;chr20:43029862..43029900,+!p1@HNF4A!0.94!7.74!HNF4A;;chr2:60780607..60780624,-!p2@BCL11A!0.93!23.76!BCL11A;;chr1:214161272..214161322,+!p1@PROX1!0.93!10.78!PROX1;;chr14:75988771..75988826,+!p1@BATF!0.93!10.22!BATF;;chr10:8096631..8096660,+!p1@GATA3!0.93!9.12!GATA3;;chr4:149363475..149363492,-!p2@NR3C2!0.93!7.46!NR3C2;;chr3:71179699..71179744,-!p2@FOXP1!0.92!57.74!FOXP1;;chr2:61108695..61108753,+!p1@REL!0.92!52.49!REL;;chr19:13213704..13213726,-!p3@LYL1!0.92!9.95!LYL1;;chr14:75746722..75746777,+!p2@FOS!0.92!9.39!FOS;;chr7:44143925..44143970,+!p1@AEBP1!0.91!166.32!AEBP1;;chr13:41240717..41240735,-!p2@FOXO1!0.91!50.28!FOXO1;;chr5:88179017..88179046,-!p2@MEF2C!0.91!29.84!MEF2C;;chr5:134369905..134369972,-!p1@PITX1!0.91!11.05!PITX1;;chr11:113930401..113930422,+!p3@ZBTB16!0.91!7.18!ZBTB16;;chr4:174450089..174450153,-!p2@HAND2!0.91!7.18!HAND2;;chr13:28543316..28543329,-!p4@CDX2!0.90!6.91!CDX2;;chr13:28543388..28543406,-!p3@CDX2!0.90!6.91!CDX2;;chr14:38064429..38064486,-!p1@FOXA1!0.90!6.91!FOXA1;;chr8:67525443..67525459,-!p2@MYBL1!0.89!10.22!MYBL1;;chr2:145277640..145277771,-!p1@ZEB2!0.88!93.66!ZEB2;;chrX:101186981..101187030,-!p1@ZMAT1!0.88!22.66!ZMAT1;;chr8:60031682..60031710,-!p2@TOX!0.88!11.05!TOX;;chr6:126240442..126240459,+!p4@NCOA7!0.88!8.56!NCOA7;;chr6:144385698..144385742,-!p2@PLAGL1!0.88!8.01!PLAGL1;;chr7:15726243..15726293,-!p2@MEOX2!0.88!6.63!MEOX2;;chrX:106960285..106960299,-!p1@TSC22D3!0.87!184.56!TSC22D3;;chr21:36421535..36421610,-!p2@RUNX1!0.87!23.76!RUNX1;;chr18:19749541..19749557,+!p1@GATA6!0.87!21.00!GATA6;;chr2:200323414..200323455,-!p1@SATB2!0.87!14.37!SATB2;;chr17:38020607..38020621,-!p9@IKZF3!0.87!6.35!IKZF3;;chr19:16435625..16435682,+!p1@KLF2!0.86!211.36!KLF2;;chr3:18466787..18466839,-!p1@SATB1!0.86!29.29!SATB1;;chrX:131623044..131623089,-!p1@MBNL3!0.86!27.08!MBNL3;;chr11:47279504..47279563,+!p1@NR1H3!0.86!14.64!NR1H3;;chr2:19558373..19558392,-!p1@OSR1!0.85!17.68!OSR1;;chr17:1959369..1959388,+!p2@HIC1!0.85!16.85!HIC1;;chr2:185463247..185463263,+!p1@ZNF804A!0.85!11.05!ZNF804A;;chr7:113726357..113726443,+!p1@FOXP2!0.85!10.78!FOXP2;;chr11:113930291..113930339,+!p2@ZBTB16!0.85!10.22!ZBTB16;;chr4:185395633..185395651,-!p2@IRF2!0.85!9.95!IRF2;;chr4:174451350..174451363,-!p3@HAND2!0.85!6.08!HAND2;;chr11:47399996..47400014,-!p4@SPI1!0.85!6.08!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!0.85!6.08!ZNF385A;;chr17:37934188..37934202,-!p8@IKZF3!0.85!6.08!IKZF3;;chr13:74708029..74708077,-!p2@KLF12!0.84!17.96!KLF12;;chr13:41240737..41240787,-!p1@FOXO1!0.83!72.94!FOXO1;;chr8:22550982..22550999,-!p1@EGR3!0.83!17.13!EGR3;;chr7:44143978..44143989,+!p2@AEBP1!0.83!11.05!AEBP1;;chr5:88179195..88179224,-!p3@MEF2C!0.83!9.39!MEF2C;;chr7:115670804..115670825,-!p1@TFEC!0.83!5.80!TFEC;;chr2:157189180..157189290,-!p1@NR4A2!0.82!31.22!NR4A2;;chr8:67525473..67525518,-!p1@MYBL1!0.82!13.54!MYBL1;;chr3:32023232..32023273,+!p1@ZNF860!0.82!8.29!ZNF860;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.82!6.08!GLIS1;;chr1:61548069..61548102,+!p3@NFIA!0.81!14.09!NFIA;;chr2:192015750..192015793,-!p2@STAT4!0.81!7.46!STAT4;;chr4:185395590..185395627,-!p3@IRF2!0.81!6.91!IRF2;;chr3:27763807..27763822,-!p1@EOMES!0.81!5.53!EOMES;;chr19:54058073..54058088,+!p1@ZNF331!0.81!5.53!ZNF331;;chr7:115799942..115799955,-!p5@TFEC!0.81!5.53!TFEC;;chr7:27205136..27205164,-!p1@HOXA9!0.81!5.53!HOXA9;;chr11:71955210..71955227,-!p1@PHOX2A!0.81!5.53!PHOX2A;;chr3:33482052..33482116,-!p2@UBP1!0.80!8.56!UBP1;;chr4:94749897..94749909,+!p1@ATOH1!0.80!5.25!ATOH1;;chr8:25902876..25902936,-!p1@EBF2!0.80!5.25!EBF2;;chr8:93115274..93115323,-!p4@RUNX1T1!0.80!5.25!RUNX1T1;;chr1:61547894..61547968,+!p2@NFIA!0.79!16.02!NFIA;;chr8:106330656..1063306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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000160;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001046;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002465;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005409;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009854 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0001045,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/appendix%252c%2520adult.CNhs12842.10189-103D9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/appendix%252c%2520adult.CNhs12842.10189-103D9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/appendix%252c%2520adult.CNhs12842.10189-103D9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/appendix%252c%2520adult.CNhs12842.10189-103D9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/appendix%252c%2520adult.CNhs12842.10189-103D9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10189-103D9 | |id=FF:10189-103D9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010189 | ||
|is_obsolete= | |||
|library_id=CNhs12842 | |||
|library_id_phase_based=2:CNhs12842 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10189 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10189 | |||
|name=appendix, adult | |name=appendix, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12842,LSID973,release012,COMPLETED | |profile_hcage=CNhs12842,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234006-10 | |rna_catalog_number=R1234006-10 | ||
| Line 56: | Line 78: | ||
|rna_tube_id=103D9 | |rna_tube_id=103D9 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=29 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 72: | Line 95: | ||
|sample_id=10189 | |sample_id=10189 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=POU5F1:3.08485022017;POU2F1..3:2.55004753765;T:1.91555763667;SRF:1.85269887732;EP300:1.66604998157;TLX2:1.54164026665;SP1:1.44684650536;XCPE1{core}:1.43445189588;MAZ:1.40117570855;MTF1:1.39091546811;TBP:1.38838489791;NFATC1..3:1.37184010222;IRF7:1.33249397914;HNF4A_NR2F1,2:1.31088706891;FOX{F1,F2,J1}:1.30154936087;HNF1A:1.28786404014;SPZ1:1.26725824325;RBPJ:1.23330331162;IRF1,2:1.20138086109;FOX{D1,D2}:1.19859380334;ETS1,2:1.19527733326;EGR1..3:1.19210995708;PAX6:1.18589033771;TFAP4:1.17241570444;ZEB1:1.15998799655;SNAI1..3:1.15862418223;TFCP2:1.13908097724;FOXA2:1.08428711014;BREu{core}:1.03891872808;ELF1,2,4:1.02685109181;SOX5:1.02343764229;MYFfamily:1.00364277626;MTE{core}:1.00028742417;FOXO1,3,4:0.999078091361;GATA6:0.963071206562;SPI1:0.961120067691;PRDM1:0.946380236114;STAT1,3:0.944330522435;EBF1:0.941273970795;TFAP2{A,C}:0.939445776127;DMAP1_NCOR{1,2}_SMARC:0.931613788556;SPIB:0.929719175608;STAT2,4,6:0.919146669617;FOXP1:0.904834828683;MZF1:0.896699249413;SMAD1..7,9:0.885071787254;RUNX1..3:0.8827940183;HMX1:0.876543936904;ZNF148:0.872694267018;IKZF2:0.868707027698;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.854185213812;PATZ1:0.807430039429;HIC1:0.80580221026;ESR1:0.775426056247;PAX3,7:0.775141096434;DBP:0.765873572525;GTF2I:0.718444705753;TFAP2B:0.707175699181;MED-1{core}:0.697371964224;MYBL2:0.667005041363;GCM1,2:0.661554154923;PITX1..3:0.654141351822;MYOD1:0.622042972023;ZFP161:0.595660698958;LMO2:0.511653813675;TLX1..3_NFIC{dimer}:0.485982206869;ATF6:0.466827499974;SREBF1,2:0.454186502108;GFI1:0.434952344381;GATA4:0.426360420102;BPTF:0.420792986514;MEF2{A,B,C,D}:0.420237615194;NFKB1_REL_RELA:0.4172424892;NKX6-1,2:0.400471492711;GTF2A1,2:0.348011580979;ADNP_IRX_SIX_ZHX:0.340439053245;OCT4_SOX2{dimer}:0.328513128729;AR:0.322563479815;RREB1:0.314605296262;NR1H4:0.304302873814;GLI1..3:0.301602170722;POU6F1:0.300760001683;ATF2:0.300681637113;TGIF1:0.296030408824;TFDP1:0.281693837752;NANOG:0.27673253176;ATF4:0.268707565927;RXRA_VDR{dimer}:0.260108645722;NR6A1:0.249168542932;NR5A1,2:0.246869630213;PAX5:0.226268612051;TBX4,5:0.216378441702;ZNF423:0.193290359009;NFY{A,B,C}:0.185746778661;FOXD3:0.174112684349;E2F1..5:0.16257533063;ZNF238:0.159535594917;JUN:0.153246028406;CUX2:0.151454254227;AIRE:0.120306195563;NHLH1,2:0.118861280578;PBX1:0.11515731969;ZNF143:0.0833874392933;REST:0.0421838672276;FOXN1:0.0287838403718;RFX2..5_RFXANK_RFXAP:0.0224032873902;VSX1,2:-0.0136071330309;SOX2:-0.016003390236;TOPORS:-0.0353552480246;HAND1,2:-0.0488521028449;IKZF1:-0.0640377116939;TEAD1:-0.065010302029;NFIL3:-0.0695627475065;PDX1:-0.0703660353159;CDC5L:-0.0761180596941;GFI1B:-0.0799782775447;FOXL1:-0.120719552332;RXR{A,B,G}:-0.132318039006;FOX{I1,J2}:-0.135158985744;HOXA9_MEIS1:-0.162500492295;NKX2-3_NKX2-5:-0.164748376589;NKX3-2:-0.166803433278;SOX{8,9,10}:-0.17489025913;ATF5_CREB3:-0.182894812196;HOX{A6,A7,B6,B7}:-0.206334429397;HMGA1,2:-0.231164125203;NRF1:-0.23618309625;ZBTB16:-0.236328861017;ELK1,4_GABP{A,B1}:-0.246275354522;NANOG{mouse}:-0.247551567853;ZNF384:-0.25631949948;NR3C1:-0.273979650859;HBP1_HMGB_SSRP1_UBTF:-0.308232226491;NKX2-1,4:-0.389370039272;CREB1:-0.405300539473;HES1:-0.419310133585;LEF1_TCF7_TCF7L1,2:-0.421840521433;NFIX:-0.434127886073;AHR_ARNT_ARNT2:-0.449023914641;MAFB:-0.452605203353;SOX17:-0.462730947071;CDX1,2,4:-0.463512770545;RORA:-0.472324292233;PRRX1,2:-0.496427398301;NKX2-2,8:-0.500541480212;ZIC1..3:-0.501522050931;MYB:-0.566667435628;HSF1,2:-0.571490054951;CEBPA,B_DDIT3:-0.593906768181;GZF1:-0.594952100643;TAL1_TCF{3,4,12}:-0.600797143486;FOSL2:-0.60265844366;PAX2:-0.636156349326;FOS_FOS{B,L1}_JUN{B,D}:-0.637192685227;ALX4:-0.667959733107;XBP1:-0.684857619882;NFE2:-0.727419485431;CRX:-0.731944598318;POU3F1..4:-0.737002902013;ZBTB6:-0.748000992335;FOXP3:-0.778595814817;POU1F1:-0.778836276021;TP53:-0.791158566408;UFEwm:-0.811991804362;FOXQ1:-0.835300201439;KLF4:-0.855462792317;LHX3,4:-0.859875631283;HLF:-0.860773960142;RFX1:-0.873235157188;TEF:-0.874274248331;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.892855473233;bHLH_family:-0.937737578039;EVI1:-0.945396548571;NFE2L2:-0.953977238898;BACH2:-0.968015583935;YY1:-0.996050376954;PAX1,9:-1.02397588564;ALX1:-1.09909241962;NKX3-1:-1.17880255019;FOXM1:-1.17904411918;PPARG:-1.21332851188;ESRRA:-1.22178884261;ONECUT1,2:-1.23774887745;HOX{A5,B5}:-1.25073970257;ARID5B:-1.26131609181;EN1,2:-1.31649323507;NFE2L1:-1.33574641406;HOX{A4,D4}:-1.50075347606;HIF1A:-1.52047219142;STAT5{A,B}:-1.81250017972;PAX8:-1.81625167662;PAX4:-2.25960881731 | |top_motifs=POU5F1:3.08485022017;POU2F1..3:2.55004753765;T:1.91555763667;SRF:1.85269887732;EP300:1.66604998157;TLX2:1.54164026665;SP1:1.44684650536;XCPE1{core}:1.43445189588;MAZ:1.40117570855;MTF1:1.39091546811;TBP:1.38838489791;NFATC1..3:1.37184010222;IRF7:1.33249397914;HNF4A_NR2F1,2:1.31088706891;FOX{F1,F2,J1}:1.30154936087;HNF1A:1.28786404014;SPZ1:1.26725824325;RBPJ:1.23330331162;IRF1,2:1.20138086109;FOX{D1,D2}:1.19859380334;ETS1,2:1.19527733326;EGR1..3:1.19210995708;PAX6:1.18589033771;TFAP4:1.17241570444;ZEB1:1.15998799655;SNAI1..3:1.15862418223;TFCP2:1.13908097724;FOXA2:1.08428711014;BREu{core}:1.03891872808;ELF1,2,4:1.02685109181;SOX5:1.02343764229;MYFfamily:1.00364277626;MTE{core}:1.00028742417;FOXO1,3,4:0.999078091361;GATA6:0.963071206562;SPI1:0.961120067691;PRDM1:0.946380236114;STAT1,3:0.944330522435;EBF1:0.941273970795;TFAP2{A,C}:0.939445776127;DMAP1_NCOR{1,2}_SMARC:0.931613788556;SPIB:0.929719175608;STAT2,4,6:0.919146669617;FOXP1:0.904834828683;MZF1:0.896699249413;SMAD1..7,9:0.885071787254;RUNX1..3:0.8827940183;HMX1:0.876543936904;ZNF148:0.872694267018;IKZF2:0.868707027698;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.854185213812;PATZ1:0.807430039429;HIC1:0.80580221026;ESR1:0.775426056247;PAX3,7:0.775141096434;DBP:0.765873572525;GTF2I:0.718444705753;TFAP2B:0.707175699181;MED-1{core}:0.697371964224;MYBL2:0.667005041363;GCM1,2:0.661554154923;PITX1..3:0.654141351822;MYOD1:0.622042972023;ZFP161:0.595660698958;LMO2:0.511653813675;TLX1..3_NFIC{dimer}:0.485982206869;ATF6:0.466827499974;SREBF1,2:0.454186502108;GFI1:0.434952344381;GATA4:0.426360420102;BPTF:0.420792986514;MEF2{A,B,C,D}:0.420237615194;NFKB1_REL_RELA:0.4172424892;NKX6-1,2:0.400471492711;GTF2A1,2:0.348011580979;ADNP_IRX_SIX_ZHX:0.340439053245;OCT4_SOX2{dimer}:0.328513128729;AR:0.322563479815;RREB1:0.314605296262;NR1H4:0.304302873814;GLI1..3:0.301602170722;POU6F1:0.300760001683;ATF2:0.300681637113;TGIF1:0.296030408824;TFDP1:0.281693837752;NANOG:0.27673253176;ATF4:0.268707565927;RXRA_VDR{dimer}:0.260108645722;NR6A1:0.249168542932;NR5A1,2:0.246869630213;PAX5:0.226268612051;TBX4,5:0.216378441702;ZNF423:0.193290359009;NFY{A,B,C}:0.185746778661;FOXD3:0.174112684349;E2F1..5:0.16257533063;ZNF238:0.159535594917;JUN:0.153246028406;CUX2:0.151454254227;AIRE:0.120306195563;NHLH1,2:0.118861280578;PBX1:0.11515731969;ZNF143:0.0833874392933;REST:0.0421838672276;FOXN1:0.0287838403718;RFX2..5_RFXANK_RFXAP:0.0224032873902;VSX1,2:-0.0136071330309;SOX2:-0.016003390236;TOPORS:-0.0353552480246;HAND1,2:-0.0488521028449;IKZF1:-0.0640377116939;TEAD1:-0.065010302029;NFIL3:-0.0695627475065;PDX1:-0.0703660353159;CDC5L:-0.0761180596941;GFI1B:-0.0799782775447;FOXL1:-0.120719552332;RXR{A,B,G}:-0.132318039006;FOX{I1,J2}:-0.135158985744;HOXA9_MEIS1:-0.162500492295;NKX2-3_NKX2-5:-0.164748376589;NKX3-2:-0.166803433278;SOX{8,9,10}:-0.17489025913;ATF5_CREB3:-0.182894812196;HOX{A6,A7,B6,B7}:-0.206334429397;HMGA1,2:-0.231164125203;NRF1:-0.23618309625;ZBTB16:-0.236328861017;ELK1,4_GABP{A,B1}:-0.246275354522;NANOG{mouse}:-0.247551567853;ZNF384:-0.25631949948;NR3C1:-0.273979650859;HBP1_HMGB_SSRP1_UBTF:-0.308232226491;NKX2-1,4:-0.389370039272;CREB1:-0.405300539473;HES1:-0.419310133585;LEF1_TCF7_TCF7L1,2:-0.421840521433;NFIX:-0.434127886073;AHR_ARNT_ARNT2:-0.449023914641;MAFB:-0.452605203353;SOX17:-0.462730947071;CDX1,2,4:-0.463512770545;RORA:-0.472324292233;PRRX1,2:-0.496427398301;NKX2-2,8:-0.500541480212;ZIC1..3:-0.501522050931;MYB:-0.566667435628;HSF1,2:-0.571490054951;CEBPA,B_DDIT3:-0.593906768181;GZF1:-0.594952100643;TAL1_TCF{3,4,12}:-0.600797143486;FOSL2:-0.60265844366;PAX2:-0.636156349326;FOS_FOS{B,L1}_JUN{B,D}:-0.637192685227;ALX4:-0.667959733107;XBP1:-0.684857619882;NFE2:-0.727419485431;CRX:-0.731944598318;POU3F1..4:-0.737002902013;ZBTB6:-0.748000992335;FOXP3:-0.778595814817;POU1F1:-0.778836276021;TP53:-0.791158566408;UFEwm:-0.811991804362;FOXQ1:-0.835300201439;KLF4:-0.855462792317;LHX3,4:-0.859875631283;HLF:-0.860773960142;RFX1:-0.873235157188;TEF:-0.874274248331;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.892855473233;bHLH_family:-0.937737578039;EVI1:-0.945396548571;NFE2L2:-0.953977238898;BACH2:-0.968015583935;YY1:-0.996050376954;PAX1,9:-1.02397588564;ALX1:-1.09909241962;NKX3-1:-1.17880255019;FOXM1:-1.17904411918;PPARG:-1.21332851188;ESRRA:-1.22178884261;ONECUT1,2:-1.23774887745;HOX{A5,B5}:-1.25073970257;ARID5B:-1.26131609181;EN1,2:-1.31649323507;NFE2L1:-1.33574641406;HOX{A4,D4}:-1.50075347606;HIF1A:-1.52047219142;STAT5{A,B}:-1.81250017972;PAX8:-1.81625167662;PAX4:-2.25960881731 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10189-103D9;search_select_hide=table117:FF:10189-103D9 | |||
}} | }} | ||
Latest revision as of 12:26, 3 June 2020
| Name: | appendix, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12842 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12842
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12842
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0164 |
| 10 | 10 | 0.088 |
| 100 | 100 | 0.1 |
| 101 | 101 | 0.853 |
| 102 | 102 | 0.504 |
| 103 | 103 | 0.12 |
| 104 | 104 | 0.986 |
| 105 | 105 | 0.499 |
| 106 | 106 | 0.563 |
| 107 | 107 | 0.768 |
| 108 | 108 | 0.947 |
| 109 | 109 | 0.0525 |
| 11 | 11 | 0.111 |
| 110 | 110 | 0.0969 |
| 111 | 111 | 0.215 |
| 112 | 112 | 0.994 |
| 113 | 113 | 0.232 |
| 114 | 114 | 0.00105 |
| 115 | 115 | 0.837 |
| 116 | 116 | 0.21 |
| 117 | 117 | 0.0932 |
| 118 | 118 | 0.0601 |
| 119 | 119 | 0.865 |
| 12 | 12 | 0.947 |
| 120 | 120 | 0.238 |
| 121 | 121 | 0.514 |
| 122 | 122 | 0.707 |
| 123 | 123 | 0.903 |
| 124 | 124 | 0.885 |
| 125 | 125 | 0.15 |
| 126 | 126 | 0.48 |
| 127 | 127 | 0.587 |
| 128 | 128 | 0.878 |
| 129 | 129 | 0.0772 |
| 13 | 13 | 0.0634 |
| 130 | 130 | 0.629 |
| 131 | 131 | 0.618 |
| 132 | 132 | 0.173 |
| 133 | 133 | 0.00393 |
| 134 | 134 | 0.0841 |
| 135 | 135 | 0.12 |
| 136 | 136 | 0.936 |
| 137 | 137 | 0.913 |
| 138 | 138 | 0.931 |
| 139 | 139 | 0.137 |
| 14 | 14 | 0.707 |
| 140 | 140 | 0.275 |
| 141 | 141 | 0.276 |
| 142 | 142 | 0.641 |
| 143 | 143 | 0.344 |
| 144 | 144 | 0.897 |
| 145 | 145 | 0.944 |
| 146 | 146 | 0.683 |
| 147 | 147 | 0.575 |
| 148 | 148 | 0.516 |
| 149 | 149 | 0.977 |
| 15 | 15 | 0.0359 |
| 150 | 150 | 0.321 |
| 151 | 151 | 0.365 |
| 152 | 152 | 0.972 |
| 153 | 153 | 0.881 |
| 154 | 154 | 0.606 |
| 155 | 155 | 0.73 |
| 156 | 156 | 0.298 |
| 157 | 157 | 0.0436 |
| 158 | 158 | 0.14 |
| 159 | 159 | 0.473 |
| 16 | 16 | 0.0551 |
| 160 | 160 | 0.325 |
| 161 | 161 | 0.878 |
| 162 | 162 | 0.912 |
| 163 | 163 | 0.51 |
| 164 | 164 | 0.0301 |
| 165 | 165 | 0.751 |
| 166 | 166 | 0.276 |
| 167 | 167 | 0.0444 |
| 168 | 168 | 0.0019 |
| 169 | 169 | 0.11 |
| 17 | 17 | 0.473 |
| 18 | 18 | 0.0191 |
| 19 | 19 | 0.66 |
| 2 | 2 | 0.1 |
| 20 | 20 | 0.0704 |
| 21 | 21 | 0.311 |
| 22 | 22 | 0.586 |
| 23 | 23 | 0.944 |
| 24 | 24 | 0.572 |
| 25 | 25 | 0.99 |
| 26 | 26 | 0.298 |
| 27 | 27 | 0.392 |
| 28 | 28 | 0.903 |
| 29 | 29 | 0.0301 |
| 3 | 3 | 0.357 |
| 30 | 30 | 0.0954 |
| 31 | 31 | 0.63 |
| 32 | 32 | 0.135 |
| 33 | 33 | 0.152 |
| 34 | 34 | 0.34 |
| 35 | 35 | 0.105 |
| 36 | 36 | 0.0395 |
| 37 | 37 | 0.0269 |
| 38 | 38 | 0.737 |
| 39 | 39 | 0.76 |
| 4 | 4 | 0.347 |
| 40 | 40 | 0.101 |
| 41 | 41 | 0.18 |
| 42 | 42 | 0.415 |
| 43 | 43 | 0.119 |
| 44 | 44 | 0.536 |
| 45 | 45 | 0.357 |
| 46 | 46 | 0.0882 |
| 47 | 47 | 0.113 |
| 48 | 48 | 0.132 |
| 49 | 49 | 0.131 |
| 5 | 5 | 0.263 |
| 50 | 50 | 0.662 |
| 51 | 51 | 0.905 |
| 52 | 52 | 0.451 |
| 53 | 53 | 0.393 |
| 54 | 54 | 0.982 |
| 55 | 55 | 0.6 |
| 56 | 56 | 0.693 |
| 57 | 57 | 0.109 |
| 58 | 58 | 0.774 |
| 59 | 59 | 0.786 |
| 6 | 6 | 0.385 |
| 60 | 60 | 0.944 |
| 61 | 61 | 0.951 |
| 62 | 62 | 0.542 |
| 63 | 63 | 0.355 |
| 64 | 64 | 0.194 |
| 65 | 65 | 0.603 |
| 66 | 66 | 0.0815 |
| 67 | 67 | 0.225 |
| 68 | 68 | 0.81 |
| 69 | 69 | 0.146 |
| 7 | 7 | 0.66 |
| 70 | 70 | 0.0172 |
| 71 | 71 | 0.0308 |
| 72 | 72 | 0.369 |
| 73 | 73 | 0.18 |
| 74 | 74 | 0.883 |
| 75 | 75 | 0.0371 |
| 76 | 76 | 0.216 |
| 77 | 77 | 0.588 |
| 78 | 78 | 0.46 |
| 79 | 79 | 0.0533 |
| 8 | 8 | 0.147 |
| 80 | 80 | 0.0196 |
| 81 | 81 | 0.87 |
| 82 | 82 | 0.292 |
| 83 | 83 | 0.238 |
| 84 | 84 | 0.00636 |
| 85 | 85 | 0.185 |
| 86 | 86 | 0.962 |
| 87 | 87 | 0.936 |
| 88 | 88 | 0.657 |
| 89 | 89 | 0.408 |
| 9 | 9 | 0.36 |
| 90 | 90 | 0.122 |
| 91 | 91 | 0.451 |
| 92 | 92 | 0.622 |
| 93 | 93 | 0.221 |
| 94 | 94 | 0.0573 |
| 95 | 95 | 0.0518 |
| 96 | 96 | 0.716 |
| 97 | 97 | 0.418 |
| 98 | 98 | 0.0987 |
| 99 | 99 | 0.7 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12842
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010189 human appendix - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001155 (colon)
0001154 (vermiform appendix)
0000160 (intestine)
0001153 (caecum)
0000479 (tissue)
0001007 (digestive system)
0000064 (organ part)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009854 (digestive tract diverticulum)
0010317 (germ layer / neural crest derived structure)
0009856 (sac)
0001555 (digestive tract)
0000059 (large intestine)
0005409 (gastrointestinal system)
0004907 (lower digestive tract)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010189 (human appendix - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0001045 (midgut)
UBERON:0010316 (germ layer / neural crest)
