FFCP PHASE1:Mm9::chr1:58852462..58852483,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12370|HGNC=|MCL_coexpression_id=345|UniProt=O89110,Q3U607|association_with_transcript=244bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end|description=CAGE_peak_4_at_Casp8_5end|id=chr1:58852462..58852483,+|ontology_enrichment_celltype=CL:0000063!3.71e-07!66|ontology_enrichment_celltype_v019_2=CL:0000066,9.39e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.36e-20!128;UBERON:0001555!1.36e-20!128;UBERON:0007026!1.36e-20!128;UBERON:0004119!1.47e-20!130;UBERON:0000925!1.47e-20!130;UBERON:0006595!1.47e-20!130;UBERON:0004921!1.72e-19!126;UBERON:0004185!1.72e-19!126;UBERON:0003929!3.21e-13!55;UBERON:0000490!1.42e-12!66;UBERON:0005911!1.72e-12!69;UBERON:0002405!1.27e-11!70;UBERON:0005057!4.01e-10!51;UBERON:0005409!5.30e-10!59;UBERON:0000344!6.96e-09!15;UBERON:0001041!8.65e-09!92;UBERON:0000077!2.10e-08!97;UBERON:0003104!4.21e-08!131;UBERON:0009142!4.21e-08!131;UBERON:0002193!4.93e-08!48;UBERON:0001242!7.11e-08!13;UBERON:0000060!7.11e-08!13;UBERON:0001262!7.11e-08!13;UBERON:0004786!7.11e-08!13;UBERON:0004923!9.88e-08!24;UBERON:0000160!2.33e-07!43;UBERON:0002368!4.84e-07!60;UBERON:0002370!7.32e-07!23;UBERON:0000974!7.32e-07!23;UBERON:0004807!7.32e-07!23;UBERON:0005058!7.32e-07!23;UBERON:0003351!7.32e-07!23;UBERON:0009113!7.32e-07!23;UBERON:0003295!7.32e-07!23;UBERON:0009722!7.32e-07!23;UBERON:0005562!7.32e-07!23;UBERON:0007690!7.32e-07!23;UBERON:0004177!7.44e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.90e-26,116;UBERON:0001555,4.90e-26,116;UBERON:0007026,4.90e-26,116;UBERON:0004119,6.10e-26,118;UBERON:0000925,6.10e-26,118;UBERON:0006595,6.10e-26,118;UBERON:0004921,9.84e-25,114;UBERON:0005409,2.33e-15,47;UBERON:0003929,2.89e-15,55;UBERON:0000490,4.73e-14,66;UBERON:0000160,1.62e-13,31;UBERON:0005911,1.83e-13,69;UBERON:0001041,1.22e-11,80;UBERON:0000344,1.03e-09,15;UBERON:0001242,1.37e-08,13;UBERON:0001262,1.37e-08,13;UBERON:0004786,1.37e-08,13;UBERON:0002193,3.06e-08,48;UBERON:0002405,3.06e-08,48;UBERON:0004923,7.97e-08,24;UBERON:0002370,9.13e-08,23;UBERON:0000974,9.13e-08,23;UBERON:0004807,9.13e-08,23;UBERON:0005058,9.13e-08,23;UBERON:0003351,9.13e-08,23;UBERON:0009113,9.13e-08,23;UBERON:0003295,9.13e-08,23;UBERON:0009722,9.13e-08,23;UBERON:0005562,9.13e-08,23;UBERON:0007690,9.13e-08,23;UBERON:0002368,1.99e-07,60;UBERON:0004177,3.36e-07,29;UBERON:0005057,3.36e-07,29;UBERON:0006562,4.55e-07,24;UBERON:0003408,4.55e-07,24;UBERON:0001557,4.55e-07,24;UBERON:0001042,4.55e-07,24;UBERON:0008814,4.55e-07,24;UBERON:0009145,4.55e-07,24;UBERON:0002530,6.20e-07,65;UBERON:0000072,7.62e-07,27;UBERON:0002390,7.90e-07,45;UBERON:0003061,7.90e-07,45;UBERON:0000077,8.60e-07,35|phase1_expression=0.320297694209588,14.3079917132138,19.1099680543605,11.1911758183527,10.0179145989269,3.86122325397347,2.33612640595526,28.019761186822,1.68946466582,3.04283884218592,1.88339765048055,1.99430397488341,20.7152883216759,16.0853540450955,1.66554880907831,3.23960427823721,2.09868563438444,5.99378114180652,7.81552271552711,5.09267582157636,0.935476191661768,1.58865521921416,2.87319768052829,6.55968933452967,4.5881856213434,12.0588712464154,12.0613358924541,11.2045040996662,12.3515222646643,9.8291750606373,7.31710685162506,0,0,0,2.88851619751275,3.32469290716985,4.08338712524738,1.67412652294763,2.3440060335714,3.66466620781659,1.76469446409304,2.73218193983378,2.91306211818692,0.503587271902309,0.405507724878058,1.65192076945513,0.782391344348039,0,0.439372365468944,0.194429899074283,0.139986421625363,1.43752564364972,2.85230430298152,7.25362142011344,2.35265659399725,2.31533492432352,1.71920063963254,1.54701627683233,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0.311068836925433,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.454357159999104,1.5870027622425,5.50742528533188,9.46466264679525,1.3599426674155,3.77792234146472,3.89865850468601,7.16843019355737,3.08977724289854,1.36344258062446,1.55871602761721,0.70667914902068,0.845060518660083,1.28326477414318,2.54805239706646,0,1.29894624606728,1.77351905832569,1.01104889002957,5.25245846707676,18.9024655062435,1.63286352971307,1.56136794089522,0.608930956624282,0.691846491768175,1.50722640552623,1.41106448562846,1.38233250462643,1.48316980640624,2.89198713839823,0.884610551949874,1.61766849947409,0.441683036920787,1.93950101254089,3.72783522436244,0,0,6.89734049063197,3.11519323715393,5.39912457894067,1.65191295194984,0.599162557619291,0,0,0.521472960576829,0.255715457330331,0,0,0.916554274652847,1.8661045591514,1.76905930903572,0.420883711772948,0.260240885925407,0,0.540186389416048,0.60281927134286,0.136072998302656,0.2562274405697,0.468508622798644,0,0.215567992932842,0.567318240503458,1.05570674498369,0.876782929710299,1.39023624612799,0.348252166522167,1.23469281844766,0.59710280045548,0.702213187313235,1.80143534980301,2.55747149456033,1.24275463521301,0,0.900310307305074,0.473489471170421,0.590292695242212,0.308534225774757,0.930135779001631,1.07309360559848,0.934122738937356,0.658239399653922,0.656669856316381,1.13496333364198,0.877199924551994,1.09775057645525,1.20785776884335,0.210289948564127,0,23.4597335918497,9.52022039988759,0,0.232236671860439,1.80414445850931,2.62188582010345,2.89091456998331,2.85338439168839,11.8632265386128,4.11747386810027,3.2673577144035,2.58643413653496,4.48417400373976,5.39291645192533,6.26800344636613,7.96565093017469,0.948339504765408,0.571242563048644,0,1.4255592949172,0.193952487167626,1.61312385747733,1.89709611372772,1.32849133181642,1.56998727841375,2.22114895059241,7.41131567717872,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,1.92941727801933,1.01850340712568,2.5892652370573,3.72911021582581,4.11842119782122,11.5014565221884,5.20997326735905,4.05648975048929,4.2938409251009,6.09951205974501,1.4473305640901,2.77129785249907,0.947457058852424,0.977789858652155,0.169745085775188,0.704070744865506,0.502518772325447,2.14239276797412,1.75620283072019,1.57635144106191,2.6575762757853,2.23236676120482,0.327726629431476,3.10832967358612,2.31438493730419,1.50791283939272,2.71952841909355,4.42587845717133,2.75936746304733,0,0.117211686592203,0.819674726883377,0.252470927204373,1.57754109708128,1.56175497718655,0.646270193198397,1.19484398976276,0.891194696329576,0.849229592366497,1.61924280669958,0.876767573733936,0.395287777946524,0.321321316421807,0.851640511249612,1.06839362200353,0.977321756121456,1.64970122972535,0,0.485561272309963,1.51161778482376,0.377210159511796,0.295301892880773,1.53717573971964,2.32585463851399,1.45413491791002,1.06949213515416,1.26414703174326,0,0,1.02131881726136,0.720244376125241,0.258717367565509,0.643011105094777,1.24138163549592,0.535106452806212,0.329098041204242,0.304464949114599,1.17335854031855,1.27099242518292,0.220528398054962,1.31909002353184,0.645857706783622,1.32688434841943,0.358117032009409,0.492422699235184,4.08073171281791,0.18542530201051,3.2465467351592,0.82554747185289,1.85194527369712,0.753473828018764,1.6403307326523,2.51655990527175,1.86976272993241,0.979660166265606,1.79659965945751,2.86401185404534,1.26534397432454,1.42323626988794,2.16010681643603,1.88179466413022,3.27543845619266,3.9110660451598,4.21532624199213,3.40282724579238,9.72112299688447,0,0.56369293868419,0.448549638131936,0.496375471371293,0.388902376688095,0.516639293910924,0.844780627453891,0.352071715937262,0.5208175393758,0.734015410979976,0.483168241652012,0,3.79213344753814,1.21635129174099,2.15693010046137,2.7283372825337,3.22248052201467,4.56967115996909,4.20684073319891,4.57837534241189,5.04832249740738,4.34378797933499,4.43635214602098,4.58052039476836,3.84847366561318,4.32444538071805,0.680191150845634,0,0.0897138566094757,0,1.54551675225752,1.12609485270709,2.74727436400898,1.07184189539533,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,1.10306105070008,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,2.78827229879264,0.943131706930381,0.936415074698824,1.21647789569252,1.26358031702349,1.90517476513229,1.50649623728312,0.964546102318525,1.64834360321323,0.588795680537589,0.685738504770831,0.532427418478012,2.14592570952589,0.726732083161643,1.03520318456864,1.18460451048347,1.46342378298218,1.05227884575137,1.08643291076689,0,0.355905054372522,1.18205378850676,1.63692417267876,1.08455788830176,0.192906610981141,0.499621155875892,0.935726433781634,1.07435527024149,0.956441660344217,1.10295709559758,1.39120701372253|short_description=p4@Casp8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12370 | |||
|HGNC= | |||
|MCL_coexpression_id=345 | |||
|TSSclassifier=NA | |||
|UniProt=O89110,Q3U607 | |||
|association_with_transcript=244bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end | |||
|cluster_id=chr1:58852462..58852483,+ | |||
|description=CAGE_peak_4_at_Casp8_5end | |||
|id=chr1:58852462..58852483,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.71e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.39e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.36e-20!128;UBERON:0001555!1.36e-20!128;UBERON:0007026!1.36e-20!128;UBERON:0004119!1.47e-20!130;UBERON:0000925!1.47e-20!130;UBERON:0006595!1.47e-20!130;UBERON:0004921!1.72e-19!126;UBERON:0004185!1.72e-19!126;UBERON:0003929!3.21e-13!55;UBERON:0000490!1.42e-12!66;UBERON:0005911!1.72e-12!69;UBERON:0002405!1.27e-11!70;UBERON:0005057!4.01e-10!51;UBERON:0005409!5.30e-10!59;UBERON:0000344!6.96e-09!15;UBERON:0001041!8.65e-09!92;UBERON:0000077!2.10e-08!97;UBERON:0003104!4.21e-08!131;UBERON:0009142!4.21e-08!131;UBERON:0002193!4.93e-08!48;UBERON:0001242!7.11e-08!13;UBERON:0000060!7.11e-08!13;UBERON:0001262!7.11e-08!13;UBERON:0004786!7.11e-08!13;UBERON:0004923!9.88e-08!24;UBERON:0000160!2.33e-07!43;UBERON:0002368!4.84e-07!60;UBERON:0002370!7.32e-07!23;UBERON:0000974!7.32e-07!23;UBERON:0004807!7.32e-07!23;UBERON:0005058!7.32e-07!23;UBERON:0003351!7.32e-07!23;UBERON:0009113!7.32e-07!23;UBERON:0003295!7.32e-07!23;UBERON:0009722!7.32e-07!23;UBERON:0005562!7.32e-07!23;UBERON:0007690!7.32e-07!23;UBERON:0004177!7.44e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.90e-26,116;UBERON:0001555,4.90e-26,116;UBERON:0007026,4.90e-26,116;UBERON:0004119,6.10e-26,118;UBERON:0000925,6.10e-26,118;UBERON:0006595,6.10e-26,118;UBERON:0004921,9.84e-25,114;UBERON:0005409,2.33e-15,47;UBERON:0003929,2.89e-15,55;UBERON:0000490,4.73e-14,66;UBERON:0000160,1.62e-13,31;UBERON:0005911,1.83e-13,69;UBERON:0001041,1.22e-11,80;UBERON:0000344,1.03e-09,15;UBERON:0001242,1.37e-08,13;UBERON:0001262,1.37e-08,13;UBERON:0004786,1.37e-08,13;UBERON:0002193,3.06e-08,48;UBERON:0002405,3.06e-08,48;UBERON:0004923,7.97e-08,24;UBERON:0002370,9.13e-08,23;UBERON:0000974,9.13e-08,23;UBERON:0004807,9.13e-08,23;UBERON:0005058,9.13e-08,23;UBERON:0003351,9.13e-08,23;UBERON:0009113,9.13e-08,23;UBERON:0003295,9.13e-08,23;UBERON:0009722,9.13e-08,23;UBERON:0005562,9.13e-08,23;UBERON:0007690,9.13e-08,23;UBERON:0002368,1.99e-07,60;UBERON:0004177,3.36e-07,29;UBERON:0005057,3.36e-07,29;UBERON:0006562,4.55e-07,24;UBERON:0003408,4.55e-07,24;UBERON:0001557,4.55e-07,24;UBERON:0001042,4.55e-07,24;UBERON:0008814,4.55e-07,24;UBERON:0009145,4.55e-07,24;UBERON:0002530,6.20e-07,65;UBERON:0000072,7.62e-07,27;UBERON:0002390,7.90e-07,45;UBERON:0003061,7.90e-07,45;UBERON:0000077,8.60e-07,35 | |||
|phase1_expression=0.320297694209588,14.3079917132138,19.1099680543605,11.1911758183527,10.0179145989269,3.86122325397347,2.33612640595526,28.019761186822,1.68946466582,3.04283884218592,1.88339765048055,1.99430397488341,20.7152883216759,16.0853540450955,1.66554880907831,3.23960427823721,2.09868563438444,5.99378114180652,7.81552271552711,5.09267582157636,0.935476191661768,1.58865521921416,2.87319768052829,6.55968933452967,4.5881856213434,12.0588712464154,12.0613358924541,11.2045040996662,12.3515222646643,9.8291750606373,7.31710685162506,0,0,0,2.88851619751275,3.32469290716985,4.08338712524738,1.67412652294763,2.3440060335714,3.66466620781659,1.76469446409304,2.73218193983378,2.91306211818692,0.503587271902309,0.405507724878058,1.65192076945513,0.782391344348039,0,0.439372365468944,0.194429899074283,0.139986421625363,1.43752564364972,2.85230430298152,7.25362142011344,2.35265659399725,2.31533492432352,1.71920063963254,1.54701627683233,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0.311068836925433,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.454357159999104,1.5870027622425,5.50742528533188,9.46466264679525,1.3599426674155,3.77792234146472,3.89865850468601,7.16843019355737,3.08977724289854,1.36344258062446,1.55871602761721,0.70667914902068,0.845060518660083,1.28326477414318,2.54805239706646,0,1.29894624606728,1.77351905832569,1.01104889002957,5.25245846707676,18.9024655062435,1.63286352971307,1.56136794089522,0.608930956624282,0.691846491768175,1.50722640552623,1.41106448562846,1.38233250462643,1.48316980640624,2.89198713839823,0.884610551949874,1.61766849947409,0.441683036920787,1.93950101254089,3.72783522436244,0,0,6.89734049063197,3.11519323715393,5.39912457894067,1.65191295194984,0.599162557619291,0,0,0.521472960576829,0.255715457330331,0,0,0.916554274652847,1.8661045591514,1.76905930903572,0.420883711772948,0.260240885925407,0,0.540186389416048,0.60281927134286,0.136072998302656,0.2562274405697,0.468508622798644,0,0.215567992932842,0.567318240503458,1.05570674498369,0.876782929710299,1.39023624612799,0.348252166522167,1.23469281844766,0.59710280045548,0.702213187313235,1.80143534980301,2.55747149456033,1.24275463521301,0,0.900310307305074,0.473489471170421,0.590292695242212,0.308534225774757,0.930135779001631,1.07309360559848,0.934122738937356,0.658239399653922,0.656669856316381,1.13496333364198,0.877199924551994,1.09775057645525,1.20785776884335,0.210289948564127,0,23.4597335918497,9.52022039988759,0,0.232236671860439,1.80414445850931,2.62188582010345,2.89091456998331,2.85338439168839,11.8632265386128,4.11747386810027,3.2673577144035,2.58643413653496,4.48417400373976,5.39291645192533,6.26800344636613,7.96565093017469,0.948339504765408,0.571242563048644,0,1.4255592949172,0.193952487167626,1.61312385747733,1.89709611372772,1.32849133181642,1.56998727841375,2.22114895059241,7.41131567717872,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,1.92941727801933,1.01850340712568,2.5892652370573,3.72911021582581,4.11842119782122,11.5014565221884,5.20997326735905,4.05648975048929,4.2938409251009,6.09951205974501,1.4473305640901,2.77129785249907,0.947457058852424,0.977789858652155,0.169745085775188,0.704070744865506,0.502518772325447,2.14239276797412,1.75620283072019,1.57635144106191,2.6575762757853,2.23236676120482,0.327726629431476,3.10832967358612,2.31438493730419,1.50791283939272,2.71952841909355,4.42587845717133,2.75936746304733,0,0.117211686592203,0.819674726883377,0.252470927204373,1.57754109708128,1.56175497718655,0.646270193198397,1.19484398976276,0.891194696329576,0.849229592366497,1.61924280669958,0.876767573733936,0.395287777946524,0.321321316421807,0.851640511249612,1.06839362200353,0.977321756121456,1.64970122972535,0,0.485561272309963,1.51161778482376,0.377210159511796,0.295301892880773,1.53717573971964,2.32585463851399,1.45413491791002,1.06949213515416,1.26414703174326,0,0,1.02131881726136,0.720244376125241,0.258717367565509,0.643011105094777,1.24138163549592,0.535106452806212,0.329098041204242,0.304464949114599,1.17335854031855,1.27099242518292,0.220528398054962,1.31909002353184,0.645857706783622,1.32688434841943,0.358117032009409,0.492422699235184,4.08073171281791,0.18542530201051,3.2465467351592,0.82554747185289,1.85194527369712,0.753473828018764,1.6403307326523,2.51655990527175,1.86976272993241,0.979660166265606,1.79659965945751,2.86401185404534,1.26534397432454,1.42323626988794,2.16010681643603,1.88179466413022,3.27543845619266,3.9110660451598,4.21532624199213,3.40282724579238,9.72112299688447,0,0.56369293868419,0.448549638131936,0.496375471371293,0.388902376688095,0.516639293910924,0.844780627453891,0.352071715937262,0.5208175393758,0.734015410979976,0.483168241652012,0,3.79213344753814,1.21635129174099,2.15693010046137,2.7283372825337,3.22248052201467,4.56967115996909,4.20684073319891,4.57837534241189,5.04832249740738,4.34378797933499,4.43635214602098,4.58052039476836,3.84847366561318,4.32444538071805,0.680191150845634,0,0.0897138566094757,0,1.54551675225752,1.12609485270709,2.74727436400898,1.07184189539533,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,1.10306105070008,0.222246727801615,0.618105171716683,0.64183841918363,0.758091635291392,2.78827229879264,0.943131706930381,0.936415074698824,1.21647789569252,1.26358031702349,1.90517476513229,1.50649623728312,0.964546102318525,1.64834360321323,0.588795680537589,0.685738504770831,0.532427418478012,2.14592570952589,0.726732083161643,1.03520318456864,1.18460451048347,1.46342378298218,1.05227884575137,1.08643291076689,0,0.355905054372522,1.18205378850676,1.63692417267876,1.08455788830176,0.192906610981141,0.499621155875892,0.935726433781634,1.07435527024149,0.956441660344217,1.10295709559758,1.39120701372253 | |||
|short_description=p4@Casp8 | |||
}} |
Latest revision as of 06:20, 27 September 2015
Short description: | p4@Casp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Casp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:345 |
Association with transcript: | 244bp_to_ENSMUST00000027189, NM_009812, uc007bcs.1_5end |
EntrezGene: | Casp8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.39e-07 | 25 |