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UBERON:0003351

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Name:pharyngeal epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a pharynx [Obol]." [OBOL:automatic]
Xrefs:
links:

EMAPA:16551
EMAPA:16708
MA:0002725
RETIRED_EHDAA2:0001460
TAO:0001174
XAO:0003202

ZFA:0001174
Synonyms: "epithelial tissue of pharynx" EXACT [OBOL:automatic]
"epithelium of pharynx" EXACT [OBOL:automatic]
"pharynx epithelial tissue" EXACT [OBOL:automatic]
"pharynx epithelium" EXACT [OBOL:automatic]
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003929(gut epithelium),UBERON:0004807(respiratory system epithelium),UBERON:0005911(endo-epithelium)
develops_from:UBERON:0007690(early pharyngeal endoderm)
part_of:UBERON:0001042(chordate pharynx)



Children

is a:UBERON:0005562 (thymus primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003351 (pharyngeal epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.