UBERON:0005057
From FANTOM5_SSTAR
Name: | immune organ |
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Namespace: | FANTOM |
Definition: | "An organ that is part of a immune system [Obol]." [OBOL:automatic] |
Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000062(organ) |
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part_of: | UBERON:0002405(immune system) |
Children
is a: | UBERON:0000029 (lymph node),UBERON:0002106 (spleen),UBERON:0002370 (thymus) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10025-101D7 (spleen, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10095-102C5
- 10097-102C7
- 10424-106D1 (splenic lymphoma with villous lymphocytes cell line:SLVL)
- 10803-111A2 (thymic carcinoma cell line:Ty-82)
- 1271-21F2 (spleen, embryo E18)
- 1273-19G4 (thymus, embryo E18)
... further results Mouse (Mus musculus)
- 10025-101D7 (spleen, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10095-102C5
- 10097-102C7
- 10424-106D1 (splenic lymphoma with villous lymphocytes cell line:SLVL)
- 10803-111A2 (thymic carcinoma cell line:Ty-82)
- 1271-21F2 (spleen, embryo E18)
- 1273-19G4 (thymus, embryo E18)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005057 (immune organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data