FFCP PHASE1:Mm9::chr17:35516553..35516582,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:35516553..35516582,+
|short_description=p1@H2-Q4
|description=CAGE_peak_1_at_H2-Q4_5end
|association_with_transcript=0bp_to_ENSMUST00000078205,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15015 | |EntrezGene=15015 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=710 | |||
|TSSclassifier=NA | |||
|UniProt=E9PWT4,Q8HWB2,E9Q3M8,Q0WXH7,Q3UWA5 | |UniProt=E9PWT4,Q8HWB2,E9Q3M8,Q0WXH7,Q3UWA5 | ||
|association_with_transcript=0bp_to_ENSMUST00000078205,ENSMUST00000081435,ENSMUST00000113887,ENSMUST00000173975,NM_001143689,uc008chm.2,uc012arg.1_5end | |||
|cluster_id=chr17:35516553..35516582,+ | |||
|description=CAGE_peak_1_at_H2-Q4_5end | |||
|id=chr17:35516553..35516582,+ | |||
|ontology_enrichment_celltype=CL:0000063!6.11e-14!66;CL:0002320!2.23e-09!46;CL:0000134!2.23e-09!46;CL:0000988!4.83e-09!32;CL:0002032!4.83e-09!32;CL:0000037!4.83e-09!32;CL:0000566!4.83e-09!32;CL:0000837!4.83e-09!32;CL:0000219!2.76e-08!54;CL:0000738!8.43e-08!17;CL:0002087!8.43e-08!17;CL:0002031!3.00e-07!25;CL:0000838!6.27e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.26e-09,46;CL:0000134,2.26e-09,46;CL:0000988,4.43e-09,32;CL:0002032,4.43e-09,32;CL:0000037,4.43e-09,32;CL:0000837,4.43e-09,32;CL:0000219,2.79e-08,54;CL:0000738,8.40e-08,17;CL:0002087,8.40e-08,17;CL:0002031,2.75e-07,25;CL:0000838,6.25e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.20e-18!130;UBERON:0000925!2.20e-18!130;UBERON:0006595!2.20e-18!130;UBERON:0002405!2.61e-18!70;UBERON:0001007!3.75e-18!128;UBERON:0001555!3.75e-18!128;UBERON:0007026!3.75e-18!128;UBERON:0004921!1.92e-17!126;UBERON:0004185!1.92e-17!126;UBERON:0002193!7.11e-17!48;UBERON:0002390!1.03e-15!45;UBERON:0003061!1.03e-15!45;UBERON:0005911!1.80e-14!69;UBERON:0003929!7.21e-13!55;UBERON:0000490!2.60e-11!66;UBERON:0000926!1.04e-10!193;UBERON:0004120!1.04e-10!193;UBERON:0006603!1.04e-10!193;UBERON:0005057!1.97e-10!51;UBERON:0000077!4.54e-10!97;UBERON:0001041!1.34e-09!92;UBERON:0003104!1.36e-09!131;UBERON:0009142!1.36e-09!131;UBERON:0002384!2.23e-09!46;UBERON:0003081!2.26e-09!88;UBERON:0001004!3.62e-09!42;UBERON:0004177!4.83e-09!29;UBERON:0000065!6.99e-09!41;UBERON:0003408!1.16e-08!24;UBERON:0002370!2.22e-08!23;UBERON:0000974!2.22e-08!23;UBERON:0004807!2.22e-08!23;UBERON:0005058!2.22e-08!23;UBERON:0003351!2.22e-08!23;UBERON:0009113!2.22e-08!23;UBERON:0003295!2.22e-08!23;UBERON:0009722!2.22e-08!23;UBERON:0005562!2.22e-08!23;UBERON:0007690!2.22e-08!23;UBERON:0006562!2.72e-08!24;UBERON:0001557!2.72e-08!24;UBERON:0001042!2.72e-08!24;UBERON:0008814!2.72e-08!24;UBERON:0009145!2.72e-08!24;UBERON:0004923!8.57e-08!24;UBERON:0002371!1.02e-07!16;UBERON:0000072!1.13e-07!27;UBERON:0002530!1.37e-07!65;UBERON:0000344!3.81e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.69e-19,118;UBERON:0000925,3.69e-19,118;UBERON:0006595,3.69e-19,118;UBERON:0001007,6.00e-19,116;UBERON:0001555,6.00e-19,116;UBERON:0007026,6.00e-19,116;UBERON:0004921,3.11e-18,114;UBERON:0002193,7.06e-17,48;UBERON:0002405,7.06e-17,48;UBERON:0002390,1.02e-15,45;UBERON:0003061,1.02e-15,45;UBERON:0005911,1.79e-14,69;UBERON:0003929,7.17e-13,55;UBERON:0000490,2.59e-11,66;UBERON:0001041,2.38e-10,80;UBERON:0000077,1.11e-09,35;UBERON:0002384,2.26e-09,46;UBERON:0001004,3.61e-09,42;UBERON:0004177,4.81e-09,29;UBERON:0005057,4.81e-09,29;UBERON:0003081,5.59e-09,87;UBERON:0000065,6.96e-09,41;UBERON:0003408,1.16e-08,24;UBERON:0002370,2.21e-08,23;UBERON:0000974,2.21e-08,23;UBERON:0004807,2.21e-08,23;UBERON:0005058,2.21e-08,23;UBERON:0003351,2.21e-08,23;UBERON:0009113,2.21e-08,23;UBERON:0003295,2.21e-08,23;UBERON:0009722,2.21e-08,23;UBERON:0005562,2.21e-08,23;UBERON:0007690,2.21e-08,23;UBERON:0006562,2.71e-08,24;UBERON:0001557,2.71e-08,24;UBERON:0001042,2.71e-08,24;UBERON:0008814,2.71e-08,24;UBERON:0009145,2.71e-08,24;UBERON:0004923,8.54e-08,24;UBERON:0002371,1.01e-07,16;UBERON:0000072,1.13e-07,27;UBERON:0002530,1.37e-07,65;UBERON:0000344,3.80e-07,15;UBERON:0000160,4.22e-07,31 | |||
|phase1_expression=1.76163731815273,107.484425552923,97.8248364687502,101.325510787788,139.749908655031,41.6340594341487,34.3410581675423,173.412623382037,514.019624575735,388.781178220831,45.7151975162098,28.3988886023398,230.949784677197,153.42280624534,27.3150004688843,37.6603997345076,26.5833513688696,124.607555316504,119.563786104204,128.590064494803,29.7651515528744,11.7163322417045,17.7615856614476,32.1584769814747,34.8702107222098,76.3728512272977,74.5218253355199,62.4866574789078,59.477330289845,82.9179126910172,48.1155208122011,0.635030673459631,0,0,30.0405684541326,27.0962471934343,31.4420808644048,30.1342774130574,21.0960543021426,21.4644735029257,66.4701581475046,35.5183652178392,22.3334762394331,6.29484089877886,5.67710814829281,2.9367480345869,17.2126095756569,6.5407546914134,10.5449367712546,6.61061656852564,9.79904951377538,1.43752564364972,161.071301815427,239.369506863744,208.71424926747,8.48956138918625,7.44986943840768,15.4701627683233,1.61853168687678,0.528990979272033,0,3.38844532069132,18.6751907183339,118.336812822504,105.808700794666,114.387298506322,29.3608108308037,33.8112108682968,0.829516898467821,0.405017814995072,0.630974884054146,3.42781181284564,2.20868540951614,1.22490799214954,0.670918297127655,0,4.40463523997555,1.78762273319263,3.68655679814984,0.263772575460388,1.18933936683133,0,3.07101298901519,3.37657566019008,4.88954392885792,4.12480019663135,1.99320353118744,1.4911955666024,11.3589289999776,7.55715601067855,168.121403446973,84.3215399441759,176.792546764015,22.1278308571505,11.0461990966104,13.8888335000174,16.0106638950197,0.852151612890289,1.03914401841148,1.41335829804136,5.49289337129054,46.1975318691544,43.3168907501298,35.5533351576666,8.22665955842614,8.61423542615335,7.58286667522175,31.7431185618987,77.1634893268572,53.2907279242721,3.81667718885499,3.04465478312141,5.07354093963329,6.78251882486802,13.8754674420132,26.7669839532209,29.1690061926561,41.6446147929346,16.8076004870476,7.27950824763341,17.6673214768315,11.1521308221101,11.1835056730873,1.17112318804619,2.09446706813455,50.8359539865097,85.0687383992034,59.3903703683474,67.0930798945782,2.69623150928681,5.49000723382352,1.38219787324151,1.91206752211504,1.53429274398198,3.53239675751252,1.78465389374533,13.6464747559424,27.3695335342205,13.8997517138521,10.3116509384372,2.34216797332867,4.36813998423599,2.34080768746954,1.80845781402858,3.81004395247436,2.43416068541215,4.49768277886698,3.3631438196072,3.88022387279116,6.05139456537022,4.04687585577082,3.5071317188412,3.89266148915837,2.43776516565517,2.88094990971121,3.78165106955137,28.0885274925294,41.1756651383544,35.2362739250535,2.48550927042602,2.11073453982987,3.42117916775928,2.13070262026689,2.55793501271625,4.47374627373397,1.39520366850245,5.09719462659276,6.53885917256149,6.41783414662574,8.53670813211295,10.3768076218695,9.35679919522127,14.4903076092093,29.5254121272818,2.52347938276953,2.57261530948211,76.3267388692573,32.5274196996159,4.47905326123991,5.10920678092965,5.15469845288373,9.68080918192044,7.78323153457046,12.1744400712038,31.7934471234823,16.7992933818491,20.1068167040216,32.4299049427076,21.056121408865,38.6492345721315,27.6656703839609,27.0832131625939,2.0863469104839,5.59817711787671,7.88954149711563,4.2766778847516,4.26695471768777,11.2918670023413,13.5326189445911,12.8420828742254,12.0889020437859,20.4839292110189,27.2736416920177,5.00535317148282,4.71741588271687,4.94696647246678,3.65148218499305,5.30589751455317,7.63877555344259,10.0693648107784,12.8086829152278,9.88421087477093,47.443508154027,47.2619003538999,27.1472775609668,34.3507274008072,25.6538301336334,37.6305946663426,106.787343916298,6.06372517665551,5.0519142697028,4.41337223015489,5.63256595892405,8.20780661464897,13.3304438896168,16.9766273636285,17.0245955634686,46.0646554469452,33.1665918807573,58.3353400388027,57.1587289976114,88.0912766761406,104.045985918098,115.308004969566,83.1081621402171,42.4942589309288,4.0137647496948,4.10240903072711,2.13115428989678,13.6334300690361,7.57219726599016,5.85658116444958,8.18608911384636,8.36390792833932,4.45597348164788,4.81230102341015,10.1202675418724,10.8134667427185,6.7198922250909,4.17717711348349,17.0328102249922,9.61554259803178,10.0989914799217,43.2221722188043,7.96470830039777,5.58395463156457,5.74414758233027,3.58349651536206,3.83892460745005,8.9156192903739,16.7978390559344,11.9966130727577,10.6949213515416,10.7452497698177,6.32511651449993,22.6898195146011,17.0219802876894,4.32146625675145,2.8458910432206,1.50035924522115,2.6601035046341,4.10248280484762,4.44282355625727,6.08929898229199,15.4883327322049,11.8625959683739,9.2621927183084,31.1635018059397,6.78150592122803,5.12659861889325,7.99794704821014,5.41664969158702,25.9417944600567,5.00648315428376,49.0399427889837,10.1129565301979,7.22258656741876,13.3741604473331,34.3102511579773,47.5858600269567,201.424439542719,178.578053164988,206.608960837614,12.4107180341965,3.79603192297362,5.69294507955176,4.96824567780286,2.71814784818809,4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| ||
|short_description=p1@H2-Q4 | |||
}} | }} |
Latest revision as of 10:14, 26 September 2015
Short description: | p1@H2-Q4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-Q4_5end |
Coexpression cluster: | MCL_coexpression_mm9:710 |
Association with transcript: | 0bp_to_ENSMUST00000078205, ENSMUST00000081435, ENSMUST00000113887, ENSMUST00000173975, NM_001143689, uc008chm.2, uc012arg.1_5end |
EntrezGene: | H2-Q4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.26e-09 | 46 |
mesenchymal cell | 2.26e-09 | 46 |
hematopoietic cell | 4.43e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.43e-09 | 32 |
hematopoietic stem cell | 4.43e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.43e-09 | 32 |
motile cell | 2.79e-08 | 54 |
leukocyte | 8.40e-08 | 17 |
nongranular leukocyte | 8.40e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 2.75e-07 | 25 |
lymphoid lineage restricted progenitor cell | 6.25e-07 | 12 |