FFCP PHASE1:Hg19::chr17:46703826..46703845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3219 | |EntrezGene=3219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |HGNC=5120 | ||
|TSSclassifier=strong | |||
|UniProt=P17482,F8W0V6,B3KPJ1 | |UniProt=P17482,F8W0V6,B3KPJ1 | ||
|association_with_transcript=0bp_to_ENST00000311177,ENST00000550387,NM_024017,uc002inx.2_5end | |association_with_transcript=0bp_to_ENST00000311177,ENST00000550387,NM_024017,uc002inx.2_5end | ||
|cluster_id=chr17:46703826..46703845,- | |||
|description=CAGE_peak_3_at_HOXB9_5end | |description=CAGE_peak_3_at_HOXB9_5end | ||
|id=chr17:46703826..46703845,- | |id=chr17:46703826..46703845,- | ||
|ontology_enrichment_celltype=CL:1000507!8.09e-14!12;CL:1000494!8.09e-14!12;CL:1000497!4.91e-13!18;CL:0002518!4.91e-13!18;CL:1000449!5.79e-13!16;CL:0000066!9.17e-12!254;CL:0002681!2.84e-09!13;CL:0002584!2.84e-09!13 | |ontology_enrichment_celltype=CL:1000507!8.09e-14!12;CL:1000494!8.09e-14!12;CL:1000497!4.91e-13!18;CL:0002518!4.91e-13!18;CL:1000449!5.79e-13!16;CL:0000066!9.17e-12!254;CL:0002681!2.84e-09!13;CL:0002584!2.84e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.60e-31;10!CL:1000494;2.60e-31;10!CL:1000497;8.15e-25;17!CL:0002518;8.15e-25;17!CL:1000449;5.02e-24;15!CL:0002681;8.03e-16;12!CL:0002584;8.03e-16;12!CL:0000239;9.23e-11;3!CL:1000615;9.23e-11;3!CL:0002306;9.23e-11;3!CL:0000650;3.93e-07;2!CL:1000500;3.93e-07;2!CL:1000618;3.93e-07;2!CL:1001318;3.93e-07;2!CL:0002173;3.93e-07;2!CL:0000244;7.58e-07;4!CL:0000731;7.58e-07;4 | |ontology_enrichment_celltype_v019=CL:1000507;2.60e-31;10!CL:1000494;2.60e-31;10!CL:1000497;8.15e-25;17!CL:0002518;8.15e-25;17!CL:1000449;5.02e-24;15!CL:0002681;8.03e-16;12!CL:0002584;8.03e-16;12!CL:0000239;9.23e-11;3!CL:1000615;9.23e-11;3!CL:0002306;9.23e-11;3!CL:0000650;3.93e-07;2!CL:1000500;3.93e-07;2!CL:1000618;3.93e-07;2!CL:1001318;3.93e-07;2!CL:0002173;3.93e-07;2!CL:0000244;7.58e-07;4!CL:0000731;7.58e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.39e-31,10;CL:1000494,2.39e-31,10;CL:1000497,9.54e-25,17;CL:0002518,9.54e-25,17;CL:1000449,5.78e-24,15;CL:0002681,9.18e-16,12;CL:0002584,9.18e-16,12;CL:0000239,9.41e-11,3;CL:1000615,9.41e-11,3;CL:0002306,9.41e-11,3;CL:0000650,3.70e-07,2;CL:1000500,3.70e-07,2;CL:1000618,3.70e-07,2;CL:1001318,3.70e-07,2;CL:0002173,3.70e-07,2;CL:0000244,8.09e-07,4;CL:0000731,8.09e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.50e-10;10!UBERON:0007687;1.50e-10;10!UBERON:0007297;5.02e-07;2 | |ontology_enrichment_development_v019=UBERON:0003918;1.50e-10;10!UBERON:0007687;1.50e-10;10!UBERON:0007297;5.02e-07;2 | ||
|ontology_enrichment_disease=DOID:14566!9.44e-18!239;DOID:162!3.98e-17!235;DOID:0050687!1.19e-13!143;DOID:305!4.57e-10!106;DOID:0050686!1.45e-07!137 | |ontology_enrichment_disease=DOID:14566!9.44e-18!239;DOID:162!3.98e-17!235;DOID:0050687!1.19e-13!143;DOID:305!4.57e-10!106;DOID:0050686!1.45e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1115;3.85e-08;20 | |ontology_enrichment_disease_v019=DOID:1115;3.85e-08;20 | ||
|ontology_enrichment_disease_v019_2=DOID:1115,3.54e-08,20;DOID:14566,1.04e-07,239;DOID:162,8.89e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0006554!4.64e-21!44;UBERON:0001008!2.39e-20!45;UBERON:0000489!2.00e-19!32;UBERON:0002113!8.06e-17!27;UBERON:0003918!8.06e-17!27;UBERON:0005095!8.06e-17!27;UBERON:0007687!8.06e-17!27;UBERON:0000058!1.64e-15!26;UBERON:0000080!3.23e-15!18;UBERON:0002120!3.23e-15!18;UBERON:0004875!3.23e-15!18;UBERON:0005721!3.23e-15!18;UBERON:0005754!3.23e-15!18;UBERON:0007297!3.23e-15!18;UBERON:0003064!4.79e-15!37;UBERON:0006555!4.18e-14!17;UBERON:0005103!4.18e-14!17;UBERON:0000083!4.18e-14!17;UBERON:0009201!4.18e-14!17;UBERON:0004819!4.18e-14!17;UBERON:0006553!4.18e-14!17;UBERON:0003074!4.18e-14!17;UBERON:0003060!4.18e-14!17;UBERON:0009773!8.09e-14!12;UBERON:0001231!8.09e-14!12;UBERON:0004810!8.09e-14!12;UBERON:0004876!3.54e-13!20;UBERON:0004211!5.79e-13!16;UBERON:0001285!5.79e-13!16;UBERON:0007684!5.79e-13!16;UBERON:0003220!5.79e-13!16;UBERON:0004208!5.79e-13!16;UBERON:0002417!1.67e-12!61;UBERON:0000916!1.67e-12!61;UBERON:0003887!2.62e-12!21;UBERON:0001851!2.49e-11!16;UBERON:0005177!5.09e-11!107;UBERON:0005172!1.25e-10!55;UBERON:0005173!1.25e-10!55;UBERON:0003886!7.14e-10!63;UBERON:0002553!2.34e-09!70;UBERON:0001225!2.84e-09!13;UBERON:0008987!2.84e-09!13;UBERON:0000464!1.05e-08!104;UBERON:0000353!8.02e-08!17;UBERON:0000466!1.49e-07!126;UBERON:0005910!1.63e-07!6;UBERON:0009569!2.17e-07!113;UBERON:0000365!6.29e-07!5 | |ontology_enrichment_uberon=UBERON:0006554!4.64e-21!44;UBERON:0001008!2.39e-20!45;UBERON:0000489!2.00e-19!32;UBERON:0002113!8.06e-17!27;UBERON:0003918!8.06e-17!27;UBERON:0005095!8.06e-17!27;UBERON:0007687!8.06e-17!27;UBERON:0000058!1.64e-15!26;UBERON:0000080!3.23e-15!18;UBERON:0002120!3.23e-15!18;UBERON:0004875!3.23e-15!18;UBERON:0005721!3.23e-15!18;UBERON:0005754!3.23e-15!18;UBERON:0007297!3.23e-15!18;UBERON:0003064!4.79e-15!37;UBERON:0006555!4.18e-14!17;UBERON:0005103!4.18e-14!17;UBERON:0000083!4.18e-14!17;UBERON:0009201!4.18e-14!17;UBERON:0004819!4.18e-14!17;UBERON:0006553!4.18e-14!17;UBERON:0003074!4.18e-14!17;UBERON:0003060!4.18e-14!17;UBERON:0009773!8.09e-14!12;UBERON:0001231!8.09e-14!12;UBERON:0004810!8.09e-14!12;UBERON:0004876!3.54e-13!20;UBERON:0004211!5.79e-13!16;UBERON:0001285!5.79e-13!16;UBERON:0007684!5.79e-13!16;UBERON:0003220!5.79e-13!16;UBERON:0004208!5.79e-13!16;UBERON:0002417!1.67e-12!61;UBERON:0000916!1.67e-12!61;UBERON:0003887!2.62e-12!21;UBERON:0001851!2.49e-11!16;UBERON:0005177!5.09e-11!107;UBERON:0005172!1.25e-10!55;UBERON:0005173!1.25e-10!55;UBERON:0003886!7.14e-10!63;UBERON:0002553!2.34e-09!70;UBERON:0001225!2.84e-09!13;UBERON:0008987!2.84e-09!13;UBERON:0000464!1.05e-08!104;UBERON:0000353!8.02e-08!17;UBERON:0000466!1.49e-07!126;UBERON:0005910!1.63e-07!6;UBERON:0009569!2.17e-07!113;UBERON:0000365!6.29e-07!5 | ||
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| ||
|short_description=p3@HOXB9 | |short_description=p3@HOXB9 | ||
}} | }} |
Latest revision as of 07:37, 25 September 2015
Short description: | p3@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311177, ENST00000550387, NM_024017, uc002inx.2_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | P17482F8W0V6B3KPJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.39e-31 | 10 |
nephron tubule epithelial cell | 2.39e-31 | 10 |
kidney cell | 9.54e-25 | 17 |
kidney epithelial cell | 9.54e-25 | 17 |
epithelial cell of nephron | 5.78e-24 | 15 |
kidney cortical cell | 9.18e-16 | 12 |
renal cortical epithelial cell | 9.18e-16 | 12 |
brush border epithelial cell | 9.41e-11 | 3 |
kidney cortex tubule cell | 9.41e-11 | 3 |
epithelial cell of proximal tubule | 9.41e-11 | 3 |
mesangial cell | 3.70e-07 | 2 |
kidney interstitial cell | 3.70e-07 | 2 |
juxtaglomerular complex cell | 3.70e-07 | 2 |
renal interstitial pericyte | 3.70e-07 | 2 |
extraglomerular mesangial cell | 3.70e-07 | 2 |
transitional epithelial cell | 8.09e-07 | 4 |
urothelial cell | 8.09e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 3.54e-08 | 20 |
disease of cellular proliferation | 1.04e-07 | 239 |
cancer | 8.89e-07 | 235 |