FFCP PHASE1:Hg19::chr11:829560..829573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=253bp_to_ENST00000528694_5end | |association_with_transcript=253bp_to_ENST00000528694_5end | ||
|cluster_id=chr11:829560..829573,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_13_at_EFCAB4A_5end | |description=CAGE_peak_13_at_EFCAB4A_5end | ||
|id=chr11:829560..829573,+ | |id=chr11:829560..829573,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.87e-13!35;CL:0002139!6.89e-13!24;CL:0002078!8.97e-11!44;CL:0000071!7.32e-10!18;CL:0002546!7.32e-10!18;CL:0000213!4.66e-09!57;CL:0000215!4.66e-09!57;CL:0002543!2.30e-07!6 | |ontology_enrichment_celltype=CL:0000115!1.87e-13!35;CL:0002139!6.89e-13!24;CL:0002078!8.97e-11!44;CL:0000071!7.32e-10!18;CL:0002546!7.32e-10!18;CL:0000213!4.66e-09!57;CL:0000215!4.66e-09!57;CL:0002543!2.30e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002188;1.48e-18;5!CL:1000746;1.49e-13;7!CL:1000612;1.49e-13;7!CL:0000115;1.00e-12;36!CL:0002262;2.45e-12;2!CL:1000398;2.45e-12;2!CL:0002078;1.28e-10;45!CL:0000346;1.17e-08;3!CL:1000428;1.17e-08;3!CL:0002681;2.65e-08;12!CL:0002584;2.65e-08;12!CL:0000213;3.26e-07;58!CL:0000215;3.26e-07;58!CL:0002327;6.49e-07;4!CL:1000449;8.09e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.62e-18,5;CL:0000115,1.74e-15,36;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0002078,1.97e-12,45;CL:0002262,2.59e-12,2;CL:1000398,2.59e-12,2;CL:0000213,1.10e-09,58;CL:0000215,1.10e-09,58;CL:0000346,1.30e-08,3;CL:1000428,1.30e-08,3;CL:0002681,2.75e-08,12;CL:0002584,2.75e-08,12;CL:0002327,6.50e-07,4;CL:1000449,8.33e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;2.45e-12;2!DOID:5093;6.49e-07;4!DOID:1612;6.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2;DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.32e-10!18;UBERON:0004638!7.32e-10!18;UBERON:0004852!7.32e-10!18;UBERON:0002049!2.73e-09!79;UBERON:0007798!2.73e-09!79;UBERON:0000055!5.85e-09!69;UBERON:0001638!1.26e-08!9;UBERON:0003920!1.26e-08!9;UBERON:0004582!1.26e-08!9;UBERON:0001737!3.82e-08!9;UBERON:0000477!1.42e-07!286;UBERON:0000487!1.45e-07!22 | |ontology_enrichment_uberon=UBERON:0001986!7.32e-10!18;UBERON:0004638!7.32e-10!18;UBERON:0004852!7.32e-10!18;UBERON:0002049!2.73e-09!79;UBERON:0007798!2.73e-09!79;UBERON:0000055!5.85e-09!69;UBERON:0001638!1.26e-08!9;UBERON:0003920!1.26e-08!9;UBERON:0004582!1.26e-08!9;UBERON:0001737!3.82e-08!9;UBERON:0000477!1.42e-07!286;UBERON:0000487!1.45e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;7.18e-14;15!UBERON:0000074;1.49e-13;7!UBERON:0001229;1.49e-13;7!UBERON:0001281;2.45e-12;2!UBERON:0003497;2.45e-12;2!UBERON:0003909;2.45e-12;2!UBERON:0003835;2.45e-12;2!UBERON:0000412;1.17e-08;3!UBERON:0001992;1.17e-08;3!UBERON:0001280;1.17e-08;3!UBERON:0004647;1.17e-08;3!UBERON:0001225;2.65e-08;12!UBERON:0008987;2.65e-08;12!UBERON:0001911;6.49e-07;4!UBERON:0001851;8.09e-07;15!UBERON:0006555;8.09e-07;15!UBERON:0004819;8.09e-07;15!UBERON:0001285;8.09e-07;15!UBERON:0007684;8.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,7.68e-14,15;UBERON:0010532,1.58e-13,7;UBERON:0000074,1.58e-13,7;UBERON:0001229,1.58e-13,7;UBERON:0001230,1.58e-13,7;UBERON:0003220,1.58e-13,7;UBERON:0005749,1.58e-13,7;UBERON:0004199,1.58e-13,7;UBERON:0004209,1.58e-13,7;UBERON:0004198,1.58e-13,7;UBERON:0001281,2.59e-12,2;UBERON:0003497,2.59e-12,2;UBERON:0003909,2.59e-12,2;UBERON:0003835,2.59e-12,2;UBERON:0005103,5.83e-12,8;UBERON:0000083,5.83e-12,8;UBERON:0009201,5.83e-12,8;UBERON:0006553,5.83e-12,8;UBERON:0003074,5.83e-12,8;UBERON:0003060,5.83e-12,8;UBERON:0000058,4.52e-11,19;UBERON:0000080,9.69e-11,9;UBERON:0002120,9.69e-11,9;UBERON:0004875,9.69e-11,9;UBERON:0005721,9.69e-11,9;UBERON:0005754,9.69e-11,9;UBERON:0007297,9.69e-11,9;UBERON:0004876,5.87e-09,11;UBERON:0001280,1.21e-08,3;UBERON:0004647,1.21e-08,3;UBERON:0005171,1.21e-08,3;UBERON:0000412,1.30e-08,3;UBERON:0001992,1.30e-08,3;UBERON:0001225,2.75e-08,12;UBERON:0008987,2.75e-08,12;UBERON:0003887,2.75e-08,12;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001851,8.33e-07,15;UBERON:0004211,8.33e-07,15;UBERON:0009773,8.33e-07,15;UBERON:0001231,8.33e-07,15;UBERON:0001285,8.33e-07,15;UBERON:0007684,8.33e-07,15;UBERON:0004208,8.33e-07,15 | |||
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|short_description=p13@EFCAB4A | |short_description=p13@EFCAB4A | ||
}} | }} |
Latest revision as of 18:53, 24 September 2015
Short description: | p13@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 253bp_to_ENST00000528694_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.62e-18 | 5 |
endothelial cell | 1.74e-15 | 36 |
glomerular cell | 1.58e-13 | 7 |
kidney corpuscule cell | 1.58e-13 | 7 |
meso-epithelial cell | 1.97e-12 | 45 |
endothelial cell of sinusoid | 2.59e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.59e-12 | 2 |
lining cell | 1.10e-09 | 58 |
barrier cell | 1.10e-09 | 58 |
hair follicle dermal papilla cell | 1.30e-08 | 3 |
stem cell of epidermis | 1.30e-08 | 3 |
kidney cortical cell | 2.75e-08 | 12 |
renal cortical epithelial cell | 2.75e-08 | 12 |
mammary gland epithelial cell | 6.50e-07 | 4 |
epithelial cell of nephron | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.85e-12 | 2 |
thoracic cancer | 6.50e-07 | 4 |
breast cancer | 6.50e-07 | 4 |