FFCP PHASE1:Hg19::chr14:24641910..24641937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9985 | |EntrezGene=9985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16879 | |HGNC=16879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000558782_5end | |association_with_transcript=-20bp_to_ENST00000558782_5end | ||
|cluster_id=chr14:24641910..24641937,+ | |||
|description=CAGE_peak_4_at_REC8_5end | |description=CAGE_peak_4_at_REC8_5end | ||
|id=chr14:24641910..24641937,+ | |id=chr14:24641910..24641937,+ | ||
|ontology_enrichment_celltype=CL:1000449!1.69e-11!16;CL:1000497!8.67e-10!18;CL:0002518!8.67e-10!18;CL:1000507!1.69e-09!12;CL:1000494!1.69e-09!12;CL:0002681!2.90e-08!13;CL:0002584!2.90e-08!13;CL:0000133!2.94e-08!59;CL:0002319!2.15e-07!25;CL:1000612!7.57e-07!7;CL:1000746!7.57e-07!7 | |ontology_enrichment_celltype=CL:1000449!1.69e-11!16;CL:1000497!8.67e-10!18;CL:0002518!8.67e-10!18;CL:1000507!1.69e-09!12;CL:1000494!1.69e-09!12;CL:0002681!2.90e-08!13;CL:0002584!2.90e-08!13;CL:0000133!2.94e-08!59;CL:0002319!2.15e-07!25;CL:1000612!7.57e-07!7;CL:1000746!7.57e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.20e-15;10!CL:1000494;2.20e-15;10!CL:1000449;2.58e-14;15!CL:0000650;2.33e-13;2!CL:1000500;2.33e-13;2!CL:1000618;2.33e-13;2!CL:1001318;2.33e-13;2!CL:0002173;2.33e-13;2!CL:0000123;5.51e-13;2!CL:0000242;5.51e-13;2!CL:1000497;1.44e-12;17!CL:0002518;1.44e-12;17!CL:0000077;3.74e-11;19!CL:0000540;3.28e-10;6!CL:0000404;3.28e-10;6!CL:0000632;5.96e-09;3!CL:1000746;2.02e-08;7!CL:1000612;2.02e-08;7!CL:0002681;2.69e-08;12!CL:0002584;2.69e-08;12!CL:0002319;9.66e-08;25!CL:0000669;4.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.57e-15,10;CL:1000494,2.57e-15,10;CL:1000449,2.42e-14,15;CL:0000650,4.33e-13,2;CL:1000500,4.33e-13,2;CL:1000618,4.33e-13,2;CL:1001318,4.33e-13,2;CL:0002173,4.33e-13,2;CL:0000242,6.64e-13,2;CL:0000047,7.92e-13,8;CL:1000497,1.36e-12,17;CL:0002518,1.36e-12,17;CL:0000077,4.67e-11,19;CL:0000540,3.29e-10,6;CL:0000031,3.29e-10,6;CL:0000404,3.29e-10,6;CL:0000632,5.29e-09,3;CL:1000746,2.13e-08,7;CL:1000612,2.13e-08,7;CL:0002681,2.65e-08,12;CL:0002584,2.65e-08,12;CL:0002319,1.02e-07,25;CL:0000669,5.72e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;3.28e-10;6!UBERON:0005754;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!3.06e-20!86;UBERON:0007284!3.06e-20!86;UBERON:0002346!1.15e-18!90;UBERON:0003056!4.15e-18!61;UBERON:0005743!1.10e-16!86;UBERON:0000073!2.27e-16!94;UBERON:0001016!2.27e-16!94;UBERON:0001017!5.26e-14!82;UBERON:0004121!7.59e-14!169;UBERON:0000080!1.01e-13!18;UBERON:0002120!1.01e-13!18;UBERON:0004875!1.01e-13!18;UBERON:0005721!1.01e-13!18;UBERON:0005754!1.01e-13!18;UBERON:0007297!1.01e-13!18;UBERON:0000924!4.19e-13!173;UBERON:0006601!4.19e-13!173;UBERON:0000153!4.85e-13!129;UBERON:0007811!4.85e-13!129;UBERON:0006555!1.63e-12!17;UBERON:0005103!1.63e-12!17;UBERON:0000083!1.63e-12!17;UBERON:0009201!1.63e-12!17;UBERON:0004819!1.63e-12!17;UBERON:0006553!1.63e-12!17;UBERON:0003074!1.63e-12!17;UBERON:0003060!1.63e-12!17;UBERON:0001049!1.90e-12!57;UBERON:0005068!1.90e-12!57;UBERON:0006241!1.90e-12!57;UBERON:0007135!1.90e-12!57;UBERON:0000033!2.24e-12!123;UBERON:0000019!2.95e-12!19;UBERON:0000047!2.95e-12!19;UBERON:0004088!2.95e-12!19;UBERON:0003072!2.95e-12!19;UBERON:0003071!2.95e-12!19;UBERON:0004128!2.95e-12!19;UBERON:0004876!7.17e-12!20;UBERON:0002616!1.08e-11!59;UBERON:0004211!1.69e-11!16;UBERON:0001285!1.69e-11!16;UBERON:0007684!1.69e-11!16;UBERON:0003220!1.69e-11!16;UBERON:0004208!1.69e-11!16;UBERON:0000970!2.06e-11!20;UBERON:0001950!2.38e-11!20;UBERON:0000064!2.54e-11!219;UBERON:0000956!4.22e-11!25;UBERON:0000203!4.22e-11!25;UBERON:0003887!4.41e-11!21;UBERON:0000020!8.85e-11!23;UBERON:0007625!9.80e-11!11;UBERON:0001869!1.16e-10!32;UBERON:0001893!1.18e-10!34;UBERON:0000058!1.19e-10!26;UBERON:0002104!1.19e-10!21;UBERON:0001456!1.19e-10!21;UBERON:0000955!3.02e-10!69;UBERON:0006238!3.02e-10!69;UBERON:0001032!3.95e-10!24;UBERON:0004456!3.95e-10!24;UBERON:0002791!5.72e-10!33;UBERON:0002619!5.88e-10!22;UBERON:0000119!8.79e-10!312;UBERON:0002020!8.91e-10!34;UBERON:0003528!8.91e-10!34;UBERON:0000483!1.31e-09!309;UBERON:0009773!1.69e-09!12;UBERON:0001231!1.69e-09!12;UBERON:0004810!1.69e-09!12;UBERON:0002780!5.78e-09!41;UBERON:0001890!5.78e-09!41;UBERON:0006240!5.78e-09!41;UBERON:0003080!1.31e-08!42;UBERON:0002113!1.41e-08!27;UBERON:0003918!1.41e-08!27;UBERON:0005095!1.41e-08!27;UBERON:0007687!1.41e-08!27;UBERON:0000489!1.53e-08!32;UBERON:0001225!2.90e-08!13;UBERON:0008987!2.90e-08!13;UBERON:0001851!8.46e-08!16;UBERON:0001801!1.02e-07!14;UBERON:0000025!2.04e-07!194;UBERON:0000475!2.28e-07!365;UBERON:0003891!2.30e-07!5;UBERON:0000481!2.80e-07!347;UBERON:0000074!7.57e-07!7;UBERON:0001229!7.57e-07!7;UBERON:0001230!7.57e-07!7;UBERON:0005749!7.57e-07!7;UBERON:0004199!7.57e-07!7;UBERON:0004209!7.57e-07!7;UBERON:0004198!7.57e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.20e-15;10!UBERON:0009773;2.20e-15;10!UBERON:0001231;2.20e-15;10!UBERON:0004810;2.20e-15;10!UBERON:0003891;2.28e-14;4!UBERON:0006555;2.58e-14;15!UBERON:0004819;2.58e-14;15!UBERON:0001285;2.58e-14;15!UBERON:0007684;2.58e-14;15!UBERON:0003567;2.33e-13;2!UBERON:0003838;2.33e-13;2!UBERON:0003586;2.33e-13;2!UBERON:0005169;2.33e-13;2!UBERON:0002321;2.33e-13;2!UBERON:0005215;2.33e-13;2!UBERON:0002303;2.33e-13;2!UBERON:0002319;2.33e-13;2!UBERON:0001851;6.01e-10;15!UBERON:0002113;9.74e-09;24!UBERON:0011143;9.74e-09;24!UBERON:0000074;2.02e-08;7!UBERON:0001229;2.02e-08;7!UBERON:0001225;2.69e-08;12!UBERON:0008987;2.69e-08;12!UBERON:0005172;1.01e-07;52!UBERON:0005173;1.01e-07;52!UBERON:0000998;2.49e-07;1!UBERON:0006868;2.49e-07;1!UBERON:0000489;3.92e-07;29!UBERON:0006554;7.09e-07;30!UBERON:0001008;7.09e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.57e-15,10;UBERON:0004211,2.42e-14,15;UBERON:0009773,2.42e-14,15;UBERON:0001231,2.42e-14,15;UBERON:0001285,2.42e-14,15;UBERON:0007684,2.42e-14,15;UBERON:0004208,2.42e-14,15;UBERON:0003891,5.93e-14,4;UBERON:0006555,2.06e-13,16;UBERON:0004819,2.06e-13,16;UBERON:0003567,4.33e-13,2;UBERON:0003838,4.33e-13,2;UBERON:0003586,4.33e-13,2;UBERON:0005169,4.33e-13,2;UBERON:0002321,4.33e-13,2;UBERON:0005215,4.33e-13,2;UBERON:0002303,4.33e-13,2;UBERON:0002319,4.33e-13,2;UBERON:0000080,4.09e-11,9;UBERON:0002120,4.09e-11,9;UBERON:0004875,4.09e-11,9;UBERON:0005721,4.09e-11,9;UBERON:0005754,4.09e-11,9;UBERON:0007297,4.09e-11,9;UBERON:0002113,8.03e-11,26;UBERON:0003918,8.03e-11,26;UBERON:0011143,8.03e-11,26;UBERON:0005095,8.03e-11,26;UBERON:0007687,8.03e-11,26;UBERON:0001851,7.03e-10,15;UBERON:0005172,1.50e-09,54;UBERON:0005173,1.50e-09,54;UBERON:0004876,4.09e-09,11;UBERON:0000489,6.20e-09,31;UBERON:0002417,2.01e-08,60;UBERON:0000916,2.01e-08,60;UBERON:0010532,2.13e-08,7;UBERON:0000074,2.13e-08,7;UBERON:0001229,2.13e-08,7;UBERON:0001230,2.13e-08,7;UBERON:0003220,2.13e-08,7;UBERON:0005749,2.13e-08,7;UBERON:0004199,2.13e-08,7;UBERON:0004209,2.13e-08,7;UBERON:0004198,2.13e-08,7;UBERON:0003887,2.31e-08,12;UBERON:0001225,2.65e-08,12;UBERON:0008987,2.65e-08,12;UBERON:0000998,1.33e-07,1;UBERON:0006868,1.33e-07,1;UBERON:0005103,2.11e-07,8;UBERON:0000083,2.11e-07,8;UBERON:0009201,2.11e-07,8;UBERON:0006553,2.11e-07,8;UBERON:0003074,2.11e-07,8;UBERON:0003060,2.11e-07,8 | |||
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|short_description=p4@REC8 | |short_description=p4@REC8 | ||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p4@REC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_REC8_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000558782_5end |
EntrezGene: | REC8 |
HGNC: | 16879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.57e-15 | 10 |
nephron tubule epithelial cell | 2.57e-15 | 10 |
epithelial cell of nephron | 2.42e-14 | 15 |
mesangial cell | 4.33e-13 | 2 |
kidney interstitial cell | 4.33e-13 | 2 |
juxtaglomerular complex cell | 4.33e-13 | 2 |
renal interstitial pericyte | 4.33e-13 | 2 |
extraglomerular mesangial cell | 4.33e-13 | 2 |
Merkel cell | 6.64e-13 | 2 |
neuronal stem cell | 7.92e-13 | 8 |
kidney cell | 1.36e-12 | 17 |
kidney epithelial cell | 1.36e-12 | 17 |
mesothelial cell | 4.67e-11 | 19 |
neuron | 3.29e-10 | 6 |
neuroblast | 3.29e-10 | 6 |
electrically signaling cell | 3.29e-10 | 6 |
hepatic stellate cell | 5.29e-09 | 3 |
glomerular cell | 2.13e-08 | 7 |
kidney corpuscule cell | 2.13e-08 | 7 |
kidney cortical cell | 2.65e-08 | 12 |
renal cortical epithelial cell | 2.65e-08 | 12 |
neural cell | 1.02e-07 | 25 |
pericyte cell | 5.72e-07 | 4 |