FFCP PHASE1:Hg19::chr7:27196217..27196246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3204 | |EntrezGene=3204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5108 | |HGNC=5108 | ||
|TSSclassifier=strong | |||
|UniProt=P31268 | |UniProt=P31268 | ||
|association_with_transcript=49bp_to_NM_006896,uc003sys.2_5end | |association_with_transcript=49bp_to_NM_006896,uc003sys.2_5end | ||
|cluster_id=chr7:27196217..27196246,- | |||
|description=CAGE_peak_2_at_HOXA7_5end | |description=CAGE_peak_2_at_HOXA7_5end | ||
|id=chr7:27196217..27196246,- | |id=chr7:27196217..27196246,- | ||
|ontology_enrichment_celltype=CL:1000449!1.10e-10!16;CL:1000507!7.47e-10!12;CL:1000494!7.47e-10!12;CL:1000497!9.42e-10!18;CL:0002518!9.42e-10!18;CL:0002681!2.41e-08!13;CL:0002584!2.41e-08!13;CL:0000136!1.13e-07!15 | |ontology_enrichment_celltype=CL:1000449!1.10e-10!16;CL:1000507!7.47e-10!12;CL:1000494!7.47e-10!12;CL:1000497!9.42e-10!18;CL:0002518!9.42e-10!18;CL:0002681!2.41e-08!13;CL:0002584!2.41e-08!13;CL:0000136!1.13e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.01e-14;15!CL:1000507;8.02e-13;10!CL:1000494;8.02e-13;10!CL:1000497;2.09e-12;17!CL:0002518;2.09e-12;17!CL:0002681;2.53e-11;12!CL:0002584;2.53e-11;12!CL:0000062;2.45e-08;9!CL:0002334;7.90e-07;12 | |ontology_enrichment_celltype_v019=CL:1000449;1.01e-14;15!CL:1000507;8.02e-13;10!CL:1000494;8.02e-13;10!CL:1000497;2.09e-12;17!CL:0002518;2.09e-12;17!CL:0002681;2.53e-11;12!CL:0002584;2.53e-11;12!CL:0000062;2.45e-08;9!CL:0002334;7.90e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.61e-14,15;CL:1000507,8.40e-13,10;CL:1000494,8.40e-13,10;CL:1000497,3.10e-12,17;CL:0002518,3.10e-12,17;CL:0002681,3.86e-11,12;CL:0002584,3.86e-11,12;CL:0000136,4.93e-07,15;CL:0002334,5.53e-07,12;CL:0002540,8.59e-07,6;CL:0000058,8.59e-07,6;CL:0000138,8.59e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!2.52e-14!44;UBERON:0001008!1.12e-13!45;UBERON:0000489!6.70e-13!32;UBERON:0003064!3.23e-12!37;UBERON:0000080!6.47e-12!18;UBERON:0002120!6.47e-12!18;UBERON:0004875!6.47e-12!18;UBERON:0005721!6.47e-12!18;UBERON:0005754!6.47e-12!18;UBERON:0007297!6.47e-12!18;UBERON:0004876!1.70e-11!20;UBERON:0006555!2.51e-11!17;UBERON:0005103!2.51e-11!17;UBERON:0000083!2.51e-11!17;UBERON:0009201!2.51e-11!17;UBERON:0004819!2.51e-11!17;UBERON:0006553!2.51e-11!17;UBERON:0003074!2.51e-11!17;UBERON:0003060!2.51e-11!17;UBERON:0002113!1.07e-10!27;UBERON:0003918!1.07e-10!27;UBERON:0005095!1.07e-10!27;UBERON:0007687!1.07e-10!27;UBERON:0004211!1.10e-10!16;UBERON:0001285!1.10e-10!16;UBERON:0007684!1.10e-10!16;UBERON:0003220!1.10e-10!16;UBERON:0004208!1.10e-10!16;UBERON:0003887!1.23e-10!21;UBERON:0009773!7.47e-10!12;UBERON:0001231!7.47e-10!12;UBERON:0004810!7.47e-10!12;UBERON:0001225!2.41e-08!13;UBERON:0008987!2.41e-08!13;UBERON:0000058!4.66e-08!26;UBERON:0001851!8.00e-07!16 | |ontology_enrichment_uberon=UBERON:0006554!2.52e-14!44;UBERON:0001008!1.12e-13!45;UBERON:0000489!6.70e-13!32;UBERON:0003064!3.23e-12!37;UBERON:0000080!6.47e-12!18;UBERON:0002120!6.47e-12!18;UBERON:0004875!6.47e-12!18;UBERON:0005721!6.47e-12!18;UBERON:0005754!6.47e-12!18;UBERON:0007297!6.47e-12!18;UBERON:0004876!1.70e-11!20;UBERON:0006555!2.51e-11!17;UBERON:0005103!2.51e-11!17;UBERON:0000083!2.51e-11!17;UBERON:0009201!2.51e-11!17;UBERON:0004819!2.51e-11!17;UBERON:0006553!2.51e-11!17;UBERON:0003074!2.51e-11!17;UBERON:0003060!2.51e-11!17;UBERON:0002113!1.07e-10!27;UBERON:0003918!1.07e-10!27;UBERON:0005095!1.07e-10!27;UBERON:0007687!1.07e-10!27;UBERON:0004211!1.10e-10!16;UBERON:0001285!1.10e-10!16;UBERON:0007684!1.10e-10!16;UBERON:0003220!1.10e-10!16;UBERON:0004208!1.10e-10!16;UBERON:0003887!1.23e-10!21;UBERON:0009773!7.47e-10!12;UBERON:0001231!7.47e-10!12;UBERON:0004810!7.47e-10!12;UBERON:0001225!2.41e-08!13;UBERON:0008987!2.41e-08!13;UBERON:0000058!4.66e-08!26;UBERON:0001851!8.00e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.01e-14;15!UBERON:0004819;1.01e-14;15!UBERON:0001285;1.01e-14;15!UBERON:0007684;1.01e-14;15!UBERON:0000489;7.11e-13;29!UBERON:0004211;8.02e-13;10!UBERON:0009773;8.02e-13;10!UBERON:0001231;8.02e-13;10!UBERON:0004810;8.02e-13;10!UBERON:0006554;3.34e-12;30!UBERON:0001008;3.34e-12;30!UBERON:0002113;7.77e-12;24!UBERON:0011143;7.77e-12;24!UBERON:0001225;2.53e-11;12!UBERON:0008987;2.53e-11;12!UBERON:0004765;2.12e-08;26!UBERON:0001851;2.28e-08;15!UBERON:0000353;2.28e-08;15!UBERON:0011135;1.47e-07;5!UBERON:0002216;1.47e-07;5!UBERON:0011134;1.47e-07;5!UBERON:0002209;1.47e-07;5!UBERON:0002213;1.47e-07;5!UBERON:0007844;1.47e-07;5!UBERON:0011138;1.47e-07;5!UBERON:0001130;1.47e-07;5!UBERON:0001066;1.47e-07;5!UBERON:0001468;1.47e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0006555;1.01e-14;15!UBERON:0004819;1.01e-14;15!UBERON:0001285;1.01e-14;15!UBERON:0007684;1.01e-14;15!UBERON:0000489;7.11e-13;29!UBERON:0004211;8.02e-13;10!UBERON:0009773;8.02e-13;10!UBERON:0001231;8.02e-13;10!UBERON:0004810;8.02e-13;10!UBERON:0006554;3.34e-12;30!UBERON:0001008;3.34e-12;30!UBERON:0002113;7.77e-12;24!UBERON:0011143;7.77e-12;24!UBERON:0001225;2.53e-11;12!UBERON:0008987;2.53e-11;12!UBERON:0004765;2.12e-08;26!UBERON:0001851;2.28e-08;15!UBERON:0000353;2.28e-08;15!UBERON:0011135;1.47e-07;5!UBERON:0002216;1.47e-07;5!UBERON:0011134;1.47e-07;5!UBERON:0002209;1.47e-07;5!UBERON:0002213;1.47e-07;5!UBERON:0007844;1.47e-07;5!UBERON:0011138;1.47e-07;5!UBERON:0001130;1.47e-07;5!UBERON:0001066;1.47e-07;5!UBERON:0001468;1.47e-07;5 | ||
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| ||
|short_description=p2@HOXA7 | |short_description=p2@HOXA7 | ||
}} | }} |
Latest revision as of 01:37, 18 September 2015
Short description: | p2@HOXA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXA7_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_NM_006896, uc003sys.2_5end |
EntrezGene: | HOXA7 |
HGNC: | 5108 |
UniProt: | P31268 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.61e-14 | 15 |
kidney tubule cell | 8.40e-13 | 10 |
nephron tubule epithelial cell | 8.40e-13 | 10 |
kidney cell | 3.10e-12 | 17 |
kidney epithelial cell | 3.10e-12 | 17 |
kidney cortical cell | 3.86e-11 | 12 |
renal cortical epithelial cell | 3.86e-11 | 12 |
fat cell | 4.93e-07 | 15 |
preadipocyte | 5.53e-07 | 12 |
mesenchymal stem cell of the bone marrow | 8.59e-07 | 6 |
chondroblast | 8.59e-07 | 6 |
chondrocyte | 8.59e-07 | 6 |