FFCP PHASE1:Hg19::chr16:75299833..75299844,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9564 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=971 | |||
|TSSclassifier=strong | |||
|UniProt=F5GXV6,B7Z7X7,P56945 | |||
|association_with_transcript=1bp_to_ENST00000535626,NM_001170720_5end | |||
|cluster_id=chr16:75299833..75299844,- | |||
|description=CAGE_peak_5_at_BCAR1_5end | |||
|id=chr16:75299833..75299844,- | |||
|ontology_enrichment_celltype=CL:0002321!2.73e-17!248;CL:0000220!4.83e-17!246;CL:0000115!5.24e-17!35;CL:0002078!1.18e-16!44;CL:0002139!1.80e-16!24;CL:0000222!2.91e-16!119;CL:0000071!6.61e-13!18;CL:0002546!6.61e-13!18;CL:0000213!4.05e-12!57;CL:0000215!4.05e-12!57;CL:0000055!4.07e-10!180;CL:1000413!1.73e-07!9;CL:0000066!2.52e-07!254;CL:0000183!4.49e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.07e-30;24!CL:0000115;9.09e-29;36!CL:0000071;1.51e-23;18!CL:0002078;4.59e-20;45!CL:1000413;2.57e-13;9!CL:0000213;1.34e-12;58!CL:0000215;1.34e-12;58!CL:1000746;4.98e-10;7!CL:1000612;4.98e-10;7!CL:0002544;2.54e-09;6!CL:0002138;1.10e-08;6!CL:0002681;4.22e-08;12!CL:0002584;4.22e-08;12!CL:0002543;5.35e-08;6!CL:0002188;1.24e-07;5!CL:1000449;2.32e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.58e-36,36;CL:0002078,2.85e-32,45;CL:0002139,8.27e-32,24;CL:0000071,1.49e-24,18;CL:0002546,1.49e-24,18;CL:0000213,4.79e-22,58;CL:0000215,4.79e-22,58;CL:0000222,1.56e-15,121;CL:1000413,1.42e-13,9;CL:0002321,4.24e-11,250;CL:1000746,7.03e-10,7;CL:1000612,7.03e-10,7;CL:0002544,1.81e-09,6;CL:0005020,8.66e-09,6;CL:0002138,8.66e-09,6;CL:0005022,8.66e-09,6;CL:0002543,9.78e-09,6;CL:0002681,3.83e-08,12;CL:0002584,3.83e-08,12;CL:0002188,1.21e-07,5;CL:1000449,1.84e-07,15;CL:0000076,2.00e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.51e-23;18!CL:0005022;1.10e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.28e-24!312;UBERON:0000483!2.02e-23!309;UBERON:0000468!2.23e-20!659;UBERON:0000475!2.17e-19!365;UBERON:0002049!6.32e-19!79;UBERON:0007798!6.32e-19!79;UBERON:0004111!1.23e-18!241;UBERON:0003914!3.87e-18!118;UBERON:0000477!4.50e-18!286;UBERON:0000467!2.71e-16!625;UBERON:0000025!2.83e-16!194;UBERON:0000480!5.05e-16!626;UBERON:0000481!1.04e-15!347;UBERON:0000055!1.83e-15!69;UBERON:0000922!2.62e-13!612;UBERON:0001986!6.61e-13!18;UBERON:0004638!6.61e-13!18;UBERON:0004852!6.61e-13!18;UBERON:0000490!1.70e-12!138;UBERON:0002050!1.78e-12!605;UBERON:0005423!1.78e-12!605;UBERON:0001009!2.16e-12!113;UBERON:0001981!2.30e-12!60;UBERON:0007500!2.30e-12!60;UBERON:0004537!2.30e-12!60;UBERON:0006965!2.30e-12!60;UBERON:0004535!3.62e-12!110;UBERON:0000923!3.89e-12!604;UBERON:0005291!3.89e-12!604;UBERON:0006598!3.89e-12!604;UBERON:0002532!3.89e-12!604;UBERON:0004872!4.21e-12!84;UBERON:0005256!6.04e-12!143;UBERON:0000487!1.42e-10!22;UBERON:0002100!1.76e-10!216;UBERON:0006914!2.13e-08!25;UBERON:0004121!2.55e-08!169;UBERON:0003104!5.29e-08!238;UBERON:0009142!5.29e-08!238;UBERON:0000924!1.39e-07!173;UBERON:0006601!1.39e-07!173;UBERON:0003915!1.73e-07!9;UBERON:0004700!1.73e-07!9;UBERON:0001917!1.73e-07!9;UBERON:0000353!2.85e-07!17;UBERON:0005172!8.30e-07!55;UBERON:0005173!8.30e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.51e-23;18!UBERON:0001986;1.51e-23;18!UBERON:0004852;1.51e-23;18!UBERON:0000487;4.49e-20;22!UBERON:0006914;7.28e-17;25!UBERON:0000490;1.61e-15;33!UBERON:0003915;2.57e-13;9!UBERON:0004700;2.57e-13;9!UBERON:0001917;2.57e-13;9!UBERON:0000055;4.62e-11;65!UBERON:0000074;4.98e-10;7!UBERON:0001229;4.98e-10;7!UBERON:0003914;7.47e-10;74!UBERON:0000353;1.08e-09;15!UBERON:0007500;6.98e-09;56!UBERON:0001981;6.98e-09;56!UBERON:0004537;6.98e-09;56!UBERON:0001473;1.93e-08;8!UBERON:0004536;1.93e-08;8!UBERON:0006558;1.93e-08;8!UBERON:0002049;2.59e-08;75!UBERON:0007798;2.59e-08;75!UBERON:0001225;4.22e-08;12!UBERON:0008987;4.22e-08;12!UBERON:0001851;1.31e-07;15!UBERON:0006555;2.32e-07;15!UBERON:0004819;2.32e-07;15!UBERON:0001285;2.32e-07;15!UBERON:0007684;2.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.49e-24,18;UBERON:0001986,1.49e-24,18;UBERON:0004852,1.49e-24,18;UBERON:0000487,5.01e-21,22;UBERON:0002049,6.36e-19,78;UBERON:0007798,6.36e-19,78;UBERON:0006914,1.11e-17,25;UBERON:0000055,2.22e-17,68;UBERON:0003914,3.83e-17,117;UBERON:0001009,3.68e-15,112;UBERON:0004535,3.70e-15,109;UBERON:0003915,1.42e-13,9;UBERON:0004700,1.42e-13,9;UBERON:0001917,1.42e-13,9;UBERON:0004872,6.00e-13,83;UBERON:0004111,8.25e-13,240;UBERON:0000119,1.15e-12,309;UBERON:0007500,1.93e-12,59;UBERON:0001981,1.93e-12,59;UBERON:0004537,1.93e-12,59;UBERON:0006965,1.93e-12,59;UBERON:0000483,1.95e-11,306;UBERON:0000025,2.36e-11,192;UBERON:0000490,3.96e-10,148;UBERON:0010532,7.03e-10,7;UBERON:0000074,7.03e-10,7;UBERON:0001229,7.03e-10,7;UBERON:0001230,7.03e-10,7;UBERON:0003220,7.03e-10,7;UBERON:0005749,7.03e-10,7;UBERON:0004199,7.03e-10,7;UBERON:0004209,7.03e-10,7;UBERON:0004198,7.03e-10,7;UBERON:0000353,9.65e-10,15;UBERON:0001473,1.76e-08,8;UBERON:0004536,1.76e-08,8;UBERON:0006558,1.76e-08,8;UBERON:0005103,1.93e-08,8;UBERON:0000083,1.93e-08,8;UBERON:0009201,1.93e-08,8;UBERON:0006553,1.93e-08,8;UBERON:0003074,1.93e-08,8;UBERON:0003060,1.93e-08,8;UBERON:0001225,3.83e-08,12;UBERON:0008987,3.83e-08,12;UBERON:0001851,1.19e-07,15;UBERON:0004211,1.84e-07,15;UBERON:0009773,1.84e-07,15;UBERON:0001231,1.84e-07,15;UBERON:0001285,1.84e-07,15;UBERON:0007684,1.84e-07,15;UBERON:0004208,1.84e-07,15;UBERON:0000080,2.52e-07,9;UBERON:0002120,2.52e-07,9;UBERON:0004875,2.52e-07,9;UBERON:0005721,2.52e-07,9;UBERON:0005754,2.52e-07,9;UBERON:0007297,2.52e-07,9;UBERON:0001638,4.33e-07,9;UBERON:0003920,4.33e-07,9;UBERON:0004582,4.33e-07,9;UBERON:0006555,7.74e-07,16;UBERON:0004819,7.74e-07,16 | |||
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| |||
|short_description=p5@BCAR1 | |||
}} |
Latest revision as of 21:29, 17 September 2015
Short description: | p5@BCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000535626, NM_001170720_5end |
EntrezGene: | BCAR1 |
HGNC: | 971 |
UniProt: | F5GXV6B7Z7X7P56945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.58e-36 | 36 |
meso-epithelial cell | 2.85e-32 | 45 |
endothelial cell of vascular tree | 8.27e-32 | 24 |
blood vessel endothelial cell | 1.49e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.49e-24 | 18 |
lining cell | 4.79e-22 | 58 |
barrier cell | 4.79e-22 | 58 |
mesodermal cell | 1.56e-15 | 121 |
endothelial cell of artery | 1.42e-13 | 9 |
embryonic cell | 4.24e-11 | 250 |
glomerular cell | 7.03e-10 | 7 |
kidney corpuscule cell | 7.03e-10 | 7 |
aortic endothelial cell | 1.81e-09 | 6 |
lymphangioblast | 8.66e-09 | 6 |
endothelial cell of lymphatic vessel | 8.66e-09 | 6 |
vascular lymphangioblast | 8.66e-09 | 6 |
vein endothelial cell | 9.78e-09 | 6 |
kidney cortical cell | 3.83e-08 | 12 |
renal cortical epithelial cell | 3.83e-08 | 12 |
glomerular endothelial cell | 1.21e-07 | 5 |
epithelial cell of nephron | 1.84e-07 | 15 |
squamous epithelial cell | 2.00e-07 | 63 |