FFCP PHASE1:Hg19::chr20:33894855..33894876,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:33894855..33894876,- to FFCP PHASE1:Hg19::chr20:33894855..33894876,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55245 | |EntrezGene=55245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15891 | |HGNC=15891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496812,uc002xcc.2_5end | |||
|cluster_id=chr20:33894855..33894876,- | |||
|description=CAGE_peak_3_at_UQCC_5end | |||
|id=chr20:33894855..33894876,- | |||
|ontology_enrichment_celltype=CL:0000055!3.06e-18!180;CL:0000220!8.66e-18!246;CL:0002321!2.53e-17!248;CL:0000548!2.56e-16!679;CL:0000004!2.56e-16!679;CL:0000255!2.56e-16!679;CL:0000012!7.15e-16!682;CL:0000222!3.48e-15!119;CL:0000144!2.15e-13!625;CL:0000057!2.24e-12!75;CL:1000449!1.78e-11!16;CL:0000003!2.02e-11!722;CL:1000497!5.75e-11!18;CL:0002518!5.75e-11!18;CL:0000066!1.36e-10!254;CL:0002371!2.29e-10!591;CL:0002681!3.58e-09!13;CL:0002584!3.58e-09!13;CL:0000077!1.58e-08!19;CL:1000507!1.78e-08!12;CL:1000494!1.78e-08!12;CL:0000183!5.24e-08!59;CL:0000680!2.20e-07!57;CL:0000056!2.20e-07!57;CL:0000355!2.20e-07!57;CL:0000187!2.94e-07!54;CL:0000213!5.87e-07!57;CL:0000215!5.87e-07!57;CL:1000612!9.13e-07!7;CL:1000746!9.13e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.49e-22;15!CL:1000497;4.59e-19;17!CL:0002518;4.59e-19;17!CL:0002681;1.06e-16;12!CL:0002584;1.06e-16;12!CL:1000746;1.97e-14;7!CL:1000612;1.97e-14;7!CL:1000507;2.84e-13;10!CL:1000494;2.84e-13;10!CL:0002188;1.10e-10;5!CL:0000077;9.76e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,7.40e-22,15;CL:1000497,7.08e-19,17;CL:0002518,7.08e-19,17;CL:0002681,1.92e-16,12;CL:0002584,1.92e-16,12;CL:1000746,5.78e-14,7;CL:1000612,5.78e-14,7;CL:1000507,3.17e-13,10;CL:1000494,3.17e-13,10;CL:0002188,1.71e-10,5;CL:0000213,1.16e-09,58;CL:0000215,1.16e-09,58;CL:0000077,1.18e-09,19;CL:0000222,2.95e-09,121;CL:0000066,5.05e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.99e-16!143;UBERON:0000914!4.84e-12!83;UBERON:0002329!4.84e-12!83;UBERON:0003077!4.84e-12!83;UBERON:0003059!4.84e-12!83;UBERON:0007282!4.84e-12!83;UBERON:0009618!4.84e-12!83;UBERON:0007285!4.84e-12!83;UBERON:0002100!5.53e-12!216;UBERON:0003104!7.45e-12!238;UBERON:0009142!7.45e-12!238;UBERON:0000481!1.41e-11!347;UBERON:0004211!1.78e-11!16;UBERON:0001285!1.78e-11!16;UBERON:0007684!1.78e-11!16;UBERON:0003220!1.78e-11!16;UBERON:0004208!1.78e-11!16;UBERON:0000475!3.20e-11!365;UBERON:0006555!1.98e-10!17;UBERON:0005103!1.98e-10!17;UBERON:0000083!1.98e-10!17;UBERON:0009201!1.98e-10!17;UBERON:0004819!1.98e-10!17;UBERON:0006553!1.98e-10!17;UBERON:0003074!1.98e-10!17;UBERON:0003060!1.98e-10!17;UBERON:0000080!1.65e-09!18;UBERON:0002120!1.65e-09!18;UBERON:0004875!1.65e-09!18;UBERON:0005721!1.65e-09!18;UBERON:0005754!1.65e-09!18;UBERON:0007297!1.65e-09!18;UBERON:0001225!3.58e-09!13;UBERON:0008987!3.58e-09!13;UBERON:0000119!1.21e-08!312;UBERON:0001851!1.24e-08!16;UBERON:0004290!1.37e-08!70;UBERON:0000058!1.53e-08!26;UBERON:0009773!1.78e-08!12;UBERON:0001231!1.78e-08!12;UBERON:0004810!1.78e-08!12;UBERON:0000483!2.59e-08!309;UBERON:0004876!5.72e-08!20;UBERON:0003064!1.39e-07!37;UBERON:0000486!1.44e-07!82;UBERON:0000353!2.15e-07!17;UBERON:0003887!2.55e-07!21;UBERON:0000490!5.45e-07!138;UBERON:0000074!9.13e-07!7;UBERON:0001229!9.13e-07!7;UBERON:0001230!9.13e-07!7;UBERON:0005749!9.13e-07!7;UBERON:0004199!9.13e-07!7;UBERON:0004209!9.13e-07!7;UBERON:0004198!9.13e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.49e-22;15!UBERON:0004819;4.49e-22;15!UBERON:0001285;4.49e-22;15!UBERON:0007684;4.49e-22;15!UBERON:0001225;1.06e-16;12!UBERON:0008987;1.06e-16;12!UBERON:0000353;6.23e-16;15!UBERON:0000074;1.97e-14;7!UBERON:0001229;1.97e-14;7!UBERON:0004211;2.84e-13;10!UBERON:0009773;2.84e-13;10!UBERON:0001231;2.84e-13;10!UBERON:0004810;2.84e-13;10!UBERON:0001851;6.89e-13;15!UBERON:0002113;1.64e-12;24!UBERON:0011143;1.64e-12;24!UBERON:0000489;8.54e-10;29!UBERON:0006554;2.31e-09;30!UBERON:0001008;2.31e-09;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.40e-22,15;UBERON:0009773,7.40e-22,15;UBERON:0001231,7.40e-22,15;UBERON:0001285,7.40e-22,15;UBERON:0007684,7.40e-22,15;UBERON:0004208,7.40e-22,15;UBERON:0006555,2.84e-20,16;UBERON:0004819,2.84e-20,16;UBERON:0001225,1.92e-16,12;UBERON:0008987,1.92e-16,12;UBERON:0000353,1.04e-15,15;UBERON:0010532,5.78e-14,7;UBERON:0000074,5.78e-14,7;UBERON:0001229,5.78e-14,7;UBERON:0001230,5.78e-14,7;UBERON:0003220,5.78e-14,7;UBERON:0005749,5.78e-14,7;UBERON:0004199,5.78e-14,7;UBERON:0004209,5.78e-14,7;UBERON:0004198,5.78e-14,7;UBERON:0004810,3.17e-13,10;UBERON:0001851,1.09e-12,15;UBERON:0005103,4.50e-12,8;UBERON:0000083,4.50e-12,8;UBERON:0009201,4.50e-12,8;UBERON:0006553,4.50e-12,8;UBERON:0003074,4.50e-12,8;UBERON:0003060,4.50e-12,8;UBERON:0002113,3.50e-11,26;UBERON:0003918,3.50e-11,26;UBERON:0011143,3.50e-11,26;UBERON:0005095,3.50e-11,26;UBERON:0007687,3.50e-11,26;UBERON:0000080,1.33e-10,9;UBERON:0002120,1.33e-10,9;UBERON:0004875,1.33e-10,9;UBERON:0005721,1.33e-10,9;UBERON:0005754,1.33e-10,9;UBERON:0007297,1.33e-10,9;UBERON:0000489,7.21e-09,31;UBERON:0004876,1.81e-08,11;UBERON:0003887,1.14e-07,12;UBERON:0000058,1.27e-07,19 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0,0.245733936501509,2.09340350391728,0.218441372130172,0.263766978228454,1.23766352960047,0.662794751455832,0,0,0.730310090387373,1.46379839637152,1.47745269692145,1.63200552995402,0,0.572471974262113,2.32686522623903,0.376627918784408,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,1.25849830862972,0,0.626984899610432,1.03366703667732,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,2.1185468930115,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0,0.326923806226917,0.151357427644931,0,1.64025002283658,0.624320153660641,1.1409436430889,0.298897361103602,0.704606991862589,1.45685649931318,1.12360645361799,0.61246251376468,1.10550885580591,0.413303124703062,0,0,1.82032272387605,1.43723628363248,0.841680569770331,0.750711119231785,0.831192346452549,1.31693286264251,0.612975591598039,0,0.794025282120147,0.179389635688862,0,0.211931901159562,0.600182192168805,0.412210116953756,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.508681776931463,0.193260853163297,0.818238361772504,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,1.39310378409594,2.88751792667834,0,0.337169380156203,0,0,0,0,0,0,0,0,5.60967095213783,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0.100528972411631,0,0.977424915930974,3.11980435583874,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0.567100388969546,0.53735113621709,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0.600686115687835,0,0.560655421726804,0,0.7333828582095,0.258543431515556,0,2.535908257668,0,0,3.08648849114571,1.41849132023278,3.46348832720929,0.142977993658148,2.17048642156577,0,1.62868092146868,0.355391948742546,2.37585561880029,0.904318131178758,1.74306691720059,0.899756920638513,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,3.50119364741774,1.62759014219841,0,0.535286966391485,0.157702415033935,0,0.601892199455438,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,1.48418066444991,0.308419387605311,0.177561725313127,1.14978018419333,2.59627214591811,0.464841513839837,0.362578348774867,0.40101294060657,0,0.918515585316854,0.182091168006717,0,2.70719767744447,0.693138033939733,5.49044838423799,1.46139224653261,1.37217117560738,1.13733384070897,1.36074964221213,1.51141141271498,3.08454505380579,1.08378575017541,3.01013864312912,3.56826782263054,0.831076008928724,2.91037181138832,0,0,0.256450125116389,0.328014645699706,1.62689197332152,0,0,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0.462145851343933,0.460511024178389,0.551346289938122,1.18162269355101,1.30515024522806,0.852266274161009,0.267096106940212,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0.744316738719335,0.632758849437452,0.571890581771475,1.27948895655667,0,1.59101623962968,0,0.539617372749944,0.274537029736055,0.353437207037059,0,1.58510321173008,0,0.975267478179181,0,0,0.545999645631943,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,1.21746226177622,0.92947049429925,1.40847801266121,0.286822704408103,0.392996164052485,1.426684205925,0,0.211107635297664,0,2.27683904259429,6.64875968465468,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,2.84136146806413,0,0,0,0,0,0.111308705022906,4.61450847834927,0,0,0,0,2.0453736500431,0,0.311039587661807,0.898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.508507300585533,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0.30607276163049,0,0.60129367765797,0.103688191397247,0,2.64793564700399,1.88359751044335,2.38944859545918,0.284609546029793,0.970722711091971,0,0,1.56706571844725,0,4.29965081179041,0,0,0,0,0,0,1.91858694505451,0.993573058514948,0,0,1.44285876452761,0.213452994739353,0,0,0,0,0.576219191952599,1.11827282008889,0,0.543616824294456,0.523014231561666,0.203996435272644,0.288950589901519,0,0.136905378891993,0,2.14882720709979,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32320740342694,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0.85194010892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| ||
|short_description=p3@UQCC | |||
}} | }} |
Latest revision as of 19:53, 15 September 2015
Short description: | p3@UQCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UQCC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496812, uc002xcc.2_5end |
EntrezGene: | UQCC |
HGNC: | 15891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.40e-22 | 15 |
kidney cell | 7.08e-19 | 17 |
kidney epithelial cell | 7.08e-19 | 17 |
kidney cortical cell | 1.92e-16 | 12 |
renal cortical epithelial cell | 1.92e-16 | 12 |
glomerular cell | 5.78e-14 | 7 |
kidney corpuscule cell | 5.78e-14 | 7 |
kidney tubule cell | 3.17e-13 | 10 |
nephron tubule epithelial cell | 3.17e-13 | 10 |
glomerular endothelial cell | 1.71e-10 | 5 |
lining cell | 1.16e-09 | 58 |
barrier cell | 1.16e-09 | 58 |
mesothelial cell | 1.18e-09 | 19 |
mesodermal cell | 2.95e-09 | 121 |
epithelial cell | 5.05e-08 | 253 |