FFCP PHASE1:Hg19::chr3:195542423..195542435,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:195542423..195542435,-
|short_description=p@chr3:195542423..195542435,-
|description=CAGE_peak_at_chr3:195542423..195542435,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:195542423..195542435,- | |||
|description=CAGE_peak_at_chr3:195542423..195542435,- | |||
|id=chr3:195542423..195542435,- | |||
|ontology_enrichment_celltype=CL:0000066!3.67e-13!254;CL:1000497!5.50e-13!18;CL:0002518!5.50e-13!18;CL:1000507!1.81e-12!12;CL:1000494!1.81e-12!12;CL:1000449!7.31e-12!16;CL:1000415!7.62e-08!2 | |||
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|ontology_enrichment_development_v019=UBERON:0008947;4.60e-07;29 | |||
|ontology_enrichment_disease=DOID:305!8.29e-19!106;DOID:0050687!4.41e-14!143;DOID:1749!5.99e-13!14;DOID:299!6.48e-09!25;DOID:4468!3.04e-07!2;DOID:162!9.40e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:299;1.13e-11;25!DOID:3030;7.83e-10;1!DOID:3111;1.61e-09;1!DOID:3603;1.61e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.13e-11,25;DOID:305,4.47e-11,106;DOID:3030,8.17e-10,1;DOID:3111,1.48e-09,1;DOID:3603,1.48e-09,1;DOID:0050687,1.26e-07,143 | |||
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| ||
|short_description=p@chr3:195542423..195542435,- | |||
}} | }} |
Latest revision as of 19:46, 29 July 2015
Short description: | p@chr3:195542423..195542435, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:195542423..195542435, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 9.58e-18 | 2 |
epithelial cell of nephron | 1.03e-13 | 15 |
kidney tubule cell | 1.66e-13 | 10 |
nephron tubule epithelial cell | 1.66e-13 | 10 |
brush border epithelial cell | 3.01e-12 | 3 |
kidney cortex tubule cell | 3.01e-12 | 3 |
epithelial cell of proximal tubule | 3.01e-12 | 3 |
kidney cell | 4.36e-12 | 17 |
kidney epithelial cell | 4.36e-12 | 17 |
pneumocyte | 4.99e-12 | 3 |
kidney cortical cell | 2.20e-11 | 12 |
renal cortical epithelial cell | 2.20e-11 | 12 |
mucus secreting cell | 8.17e-10 | 1 |
epithelial cell | 1.27e-08 | 253 |
epithelial cell of lung | 3.92e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.13e-11 | 25 |
carcinoma | 4.47e-11 | 106 |
mucinous adenocarcinoma | 8.17e-10 | 1 |
cystadenocarcinoma | 1.48e-09 | 1 |
mucinous cystadenocarcinoma | 1.48e-09 | 1 |
cell type cancer | 1.26e-07 | 143 |