FFCP PHASE1:Hg19::chr19:30206232..30206240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:30206232..30206240,+ | |||
|description=CAGE_peak_at_chr19:30206232..30206240,+ | |description=CAGE_peak_at_chr19:30206232..30206240,+ | ||
|id=chr19:30206232..30206240,+ | |id=chr19:30206232..30206240,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;9.09e-34;3!CL:0002188;9.92e-21;5!CL:1000746;4.07e-15;7!CL:1000612;4.07e-15;7!CL:0000148;6.94e-11;10!CL:0002681;3.13e-09;12!CL:0002584;3.13e-09;12!CL:0000147;4.82e-08;14!CL:1000449;1.44e-07;15!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | |ontology_enrichment_celltype_v019=CL:0002567;9.09e-34;3!CL:0002188;9.92e-21;5!CL:1000746;4.07e-15;7!CL:1000612;4.07e-15;7!CL:0000148;6.94e-11;10!CL:0002681;3.13e-09;12!CL:0002584;3.13e-09;12!CL:0000147;4.82e-08;14!CL:1000449;1.44e-07;15!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.51e-34,3;CL:0002188,7.35e-21,5;CL:1000746,3.29e-15,7;CL:1000612,3.29e-15,7;CL:0000148,6.28e-11,10;CL:0000541,6.28e-11,10;CL:0002681,2.77e-09,12;CL:0002584,2.77e-09,12;CL:0000147,4.49e-08,14;CL:1000449,1.31e-07,15;CL:1000497,8.11e-07,17;CL:0002518,8.11e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.20e-08!57;UBERON:0005068!3.20e-08!57;UBERON:0006241!3.20e-08!57;UBERON:0007135!3.20e-08!57;UBERON:0002346!8.43e-08!90;UBERON:0003075!3.16e-07!86;UBERON:0007284!3.16e-07!86;UBERON:0000955!3.25e-07!69;UBERON:0006238!3.25e-07!69;UBERON:0002616!7.45e-07!59 | |ontology_enrichment_uberon=UBERON:0001049!3.20e-08!57;UBERON:0005068!3.20e-08!57;UBERON:0006241!3.20e-08!57;UBERON:0007135!3.20e-08!57;UBERON:0002346!8.43e-08!90;UBERON:0003075!3.16e-07!86;UBERON:0007284!3.16e-07!86;UBERON:0000955!3.25e-07!69;UBERON:0006238!3.25e-07!69;UBERON:0002616!7.45e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;4.07e-15;7!UBERON:0001229;4.07e-15;7!UBERON:0002113;5.07e-10;24!UBERON:0011143;5.07e-10;24!UBERON:0001225;3.13e-09;12!UBERON:0008987;3.13e-09;12!UBERON:0000489;2.10e-08;29!UBERON:0006554;3.82e-08;30!UBERON:0001008;3.82e-08;30!UBERON:0001851;1.44e-07;15!UBERON:0006555;1.44e-07;15!UBERON:0000353;1.44e-07;15!UBERON:0004819;1.44e-07;15!UBERON:0001285;1.44e-07;15!UBERON:0007684;1.44e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000074;4.07e-15;7!UBERON:0001229;4.07e-15;7!UBERON:0002113;5.07e-10;24!UBERON:0011143;5.07e-10;24!UBERON:0001225;3.13e-09;12!UBERON:0008987;3.13e-09;12!UBERON:0000489;2.10e-08;29!UBERON:0006554;3.82e-08;30!UBERON:0001008;3.82e-08;30!UBERON:0001851;1.44e-07;15!UBERON:0006555;1.44e-07;15!UBERON:0000353;1.44e-07;15!UBERON:0004819;1.44e-07;15!UBERON:0001285;1.44e-07;15!UBERON:0007684;1.44e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.29e-15,7;UBERON:0000074,3.29e-15,7;UBERON:0001229,3.29e-15,7;UBERON:0001230,3.29e-15,7;UBERON:0003220,3.29e-15,7;UBERON:0005749,3.29e-15,7;UBERON:0004199,3.29e-15,7;UBERON:0004209,3.29e-15,7;UBERON:0004198,3.29e-15,7;UBERON:0005103,1.94e-13,8;UBERON:0000083,1.94e-13,8;UBERON:0009201,1.94e-13,8;UBERON:0006553,1.94e-13,8;UBERON:0003074,1.94e-13,8;UBERON:0003060,1.94e-13,8;UBERON:0000080,4.67e-12,9;UBERON:0002120,4.67e-12,9;UBERON:0004875,4.67e-12,9;UBERON:0005721,4.67e-12,9;UBERON:0005754,4.67e-12,9;UBERON:0007297,4.67e-12,9;UBERON:0004876,4.83e-10,11;UBERON:0002113,2.45e-09,26;UBERON:0003918,2.45e-09,26;UBERON:0011143,2.45e-09,26;UBERON:0005095,2.45e-09,26;UBERON:0007687,2.45e-09,26;UBERON:0001225,2.77e-09,12;UBERON:0008987,2.77e-09,12;UBERON:0003887,2.77e-09,12;UBERON:0000489,6.23e-08,31;UBERON:0001851,1.31e-07,15;UBERON:0004211,1.31e-07,15;UBERON:0009773,1.31e-07,15;UBERON:0000353,1.31e-07,15;UBERON:0001231,1.31e-07,15;UBERON:0001285,1.31e-07,15;UBERON:0007684,1.31e-07,15;UBERON:0004208,1.31e-07,15;UBERON:0006555,3.44e-07,16;UBERON:0004819,3.44e-07,16 | |||
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|short_description=p@chr19:30206232..30206240,+ | |short_description=p@chr19:30206232..30206240,+ | ||
}} | }} |
Latest revision as of 06:05, 26 July 2015
Short description: | p@chr19:30206232..30206240, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:30206232..30206240, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.51e-34 | 3 |
glomerular endothelial cell | 7.35e-21 | 5 |
glomerular cell | 3.29e-15 | 7 |
kidney corpuscule cell | 3.29e-15 | 7 |
melanocyte | 6.28e-11 | 10 |
melanoblast | 6.28e-11 | 10 |
kidney cortical cell | 2.77e-09 | 12 |
renal cortical epithelial cell | 2.77e-09 | 12 |
pigment cell | 4.49e-08 | 14 |
epithelial cell of nephron | 1.31e-07 | 15 |
kidney cell | 8.11e-07 | 17 |
kidney epithelial cell | 8.11e-07 | 17 |