FFCP PHASE1:Hg19::chr17:73829077..73829123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73829077..73829123,- | |||
|description=CAGE_peak_at_chr17:73829077..73829123,- | |description=CAGE_peak_at_chr17:73829077..73829123,- | ||
|id=chr17:73829077..73829123,- | |id=chr17:73829077..73829123,- | ||
|ontology_enrichment_celltype=CL:0000084!1.07e-15!25;CL:0000827!1.07e-15!25;CL:1000449!1.42e-12!16;CL:1000507!4.23e-11!12;CL:1000494!4.23e-11!12;CL:0000791!8.11e-11!18;CL:0000789!8.11e-11!18;CL:0002420!8.11e-11!18;CL:0002419!8.11e-11!18;CL:0000790!8.11e-11!18;CL:0000542!8.74e-11!53;CL:0000051!8.74e-11!53;CL:1000497!1.34e-10!18;CL:0002518!1.34e-10!18;CL:0000838!4.34e-10!52;CL:0002681!1.53e-09!13;CL:0002584!1.53e-09!13;CL:0000625!8.99e-08!11;CL:0002322!8.23e-07!5 | |ontology_enrichment_celltype=CL:0000084!1.07e-15!25;CL:0000827!1.07e-15!25;CL:1000449!1.42e-12!16;CL:1000507!4.23e-11!12;CL:1000494!4.23e-11!12;CL:0000791!8.11e-11!18;CL:0000789!8.11e-11!18;CL:0002420!8.11e-11!18;CL:0002419!8.11e-11!18;CL:0000790!8.11e-11!18;CL:0000542!8.74e-11!53;CL:0000051!8.74e-11!53;CL:1000497!1.34e-10!18;CL:0002518!1.34e-10!18;CL:0000838!4.34e-10!52;CL:0002681!1.53e-09!13;CL:0002584!1.53e-09!13;CL:0000625!8.99e-08!11;CL:0002322!8.23e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;6.67e-32;10!CL:1000494;6.67e-32;10!CL:1000449;1.59e-29;15!CL:1000497;1.02e-25;17!CL:0002518;1.02e-25;17!CL:0002681;8.62e-21;12!CL:0002584;8.62e-21;12!CL:0002322;5.61e-17;5!CL:0000239;5.74e-11;3!CL:1000615;5.74e-11;3!CL:0002306;5.74e-11;3!CL:1000746;1.64e-07;7!CL:1000612;1.64e-07;7!CL:0000650;2.16e-07;2!CL:1000500;2.16e-07;2!CL:1000618;2.16e-07;2!CL:1001318;2.16e-07;2!CL:0002173;2.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.14e-32,10;CL:1000494,4.14e-32,10;CL:1000449,1.09e-29,15;CL:1000497,7.38e-26,17;CL:0002518,7.38e-26,17;CL:0002681,6.54e-21,12;CL:0002584,6.54e-21,12;CL:0002322,5.47e-17,5;CL:0000239,3.93e-11,3;CL:1000615,3.93e-11,3;CL:0002306,3.93e-11,3;CL:1000746,2.00e-07,7;CL:1000612,2.00e-07,7;CL:0000650,3.09e-07,2;CL:1000500,3.09e-07,2;CL:1000618,3.09e-07,2;CL:1001318,3.09e-07,2;CL:0002173,3.09e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.82e-07!51;DOID:0060083!4.82e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!1.42e-12!16;UBERON:0001285!1.42e-12!16;UBERON:0007684!1.42e-12!16;UBERON:0003220!1.42e-12!16;UBERON:0004208!1.42e-12!16;UBERON:0006555!1.59e-11!17;UBERON:0005103!1.59e-11!17;UBERON:0000083!1.59e-11!17;UBERON:0009201!1.59e-11!17;UBERON:0004819!1.59e-11!17;UBERON:0006553!1.59e-11!17;UBERON:0003074!1.59e-11!17;UBERON:0003060!1.59e-11!17;UBERON:0009773!4.23e-11!12;UBERON:0001231!4.23e-11!12;UBERON:0004810!4.23e-11!12;UBERON:0003887!6.34e-11!21;UBERON:0000080!1.34e-10!18;UBERON:0002120!1.34e-10!18;UBERON:0004875!1.34e-10!18;UBERON:0005721!1.34e-10!18;UBERON:0005754!1.34e-10!18;UBERON:0007297!1.34e-10!18;UBERON:0001225!1.53e-09!13;UBERON:0008987!1.53e-09!13;UBERON:0000058!4.57e-09!26;UBERON:0004876!4.85e-09!20;UBERON:0002113!2.83e-08!27;UBERON:0003918!2.83e-08!27;UBERON:0005095!2.83e-08!27;UBERON:0007687!2.83e-08!27;UBERON:0001851!4.32e-08!16;UBERON:0000489!1.80e-07!32;UBERON:0003064!5.93e-07!37 | |ontology_enrichment_uberon=UBERON:0004211!1.42e-12!16;UBERON:0001285!1.42e-12!16;UBERON:0007684!1.42e-12!16;UBERON:0003220!1.42e-12!16;UBERON:0004208!1.42e-12!16;UBERON:0006555!1.59e-11!17;UBERON:0005103!1.59e-11!17;UBERON:0000083!1.59e-11!17;UBERON:0009201!1.59e-11!17;UBERON:0004819!1.59e-11!17;UBERON:0006553!1.59e-11!17;UBERON:0003074!1.59e-11!17;UBERON:0003060!1.59e-11!17;UBERON:0009773!4.23e-11!12;UBERON:0001231!4.23e-11!12;UBERON:0004810!4.23e-11!12;UBERON:0003887!6.34e-11!21;UBERON:0000080!1.34e-10!18;UBERON:0002120!1.34e-10!18;UBERON:0004875!1.34e-10!18;UBERON:0005721!1.34e-10!18;UBERON:0005754!1.34e-10!18;UBERON:0007297!1.34e-10!18;UBERON:0001225!1.53e-09!13;UBERON:0008987!1.53e-09!13;UBERON:0000058!4.57e-09!26;UBERON:0004876!4.85e-09!20;UBERON:0002113!2.83e-08!27;UBERON:0003918!2.83e-08!27;UBERON:0005095!2.83e-08!27;UBERON:0007687!2.83e-08!27;UBERON:0001851!4.32e-08!16;UBERON:0000489!1.80e-07!32;UBERON:0003064!5.93e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.67e-32;10!UBERON:0009773;6.67e-32;10!UBERON:0001231;6.67e-32;10!UBERON:0004810;6.67e-32;10!UBERON:0006555;1.59e-29;15!UBERON:0004819;1.59e-29;15!UBERON:0001285;1.59e-29;15!UBERON:0007684;1.59e-29;15!UBERON:0001225;8.62e-21;12!UBERON:0008987;8.62e-21;12!UBERON:0002113;2.18e-20;24!UBERON:0011143;2.18e-20;24!UBERON:0000489;2.45e-16;29!UBERON:0001851;2.81e-16;15!UBERON:0000353;2.81e-16;15!UBERON:0006554;1.09e-15;30!UBERON:0001008;1.09e-15;30!UBERON:0006853;5.74e-11;3!UBERON:0007685;5.74e-11;3!UBERON:0004134;5.74e-11;3!UBERON:0000074;1.64e-07;7!UBERON:0001229;1.64e-07;7!UBERON:0003567;2.16e-07;2!UBERON:0003838;2.16e-07;2!UBERON:0003586;2.16e-07;2!UBERON:0005169;2.16e-07;2!UBERON:0002321;2.16e-07;2!UBERON:0005215;2.16e-07;2!UBERON:0002303;2.16e-07;2!UBERON:0002319;2.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.14e-32,10;UBERON:0004211,1.09e-29,15;UBERON:0009773,1.09e-29,15;UBERON:0001231,1.09e-29,15;UBERON:0001285,1.09e-29,15;UBERON:0007684,1.09e-29,15;UBERON:0004208,1.09e-29,15;UBERON:0006555,1.18e-27,16;UBERON:0004819,1.18e-27,16;UBERON:0001225,6.54e-21,12;UBERON:0008987,6.54e-21,12;UBERON:0002113,1.25e-18,26;UBERON:0003918,1.25e-18,26;UBERON:0011143,1.25e-18,26;UBERON:0005095,1.25e-18,26;UBERON:0007687,1.25e-18,26;UBERON:0001851,2.26e-16,15;UBERON:0000353,2.26e-16,15;UBERON:0000489,3.98e-15,31;UBERON:0006853,3.93e-11,3;UBERON:0007685,3.93e-11,3;UBERON:0004134,3.93e-11,3;UBERON:0006554,5.74e-09,47;UBERON:0001008,1.01e-08,48;UBERON:0005172,1.93e-07,54;UBERON:0005173,1.93e-07,54;UBERON:0010532,2.00e-07,7;UBERON:0000074,2.00e-07,7;UBERON:0001229,2.00e-07,7;UBERON:0001230,2.00e-07,7;UBERON:0003220,2.00e-07,7;UBERON:0005749,2.00e-07,7;UBERON:0004199,2.00e-07,7;UBERON:0004209,2.00e-07,7;UBERON:0004198,2.00e-07,7;UBERON:0003567,3.09e-07,2;UBERON:0003838,3.09e-07,2;UBERON:0003586,3.09e-07,2;UBERON:0005169,3.09e-07,2;UBERON:0002321,3.09e-07,2;UBERON:0005215,3.09e-07,2;UBERON:0002303,3.09e-07,2;UBERON:0002319,3.09e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,1.00311897234407,0.32592226663359,1.4203434172042,1.94826728407911,3.56513462032555,2.06224135232386,1.77227115666897,1.35401931882508,2.5618263945135,2.34106825607781,1.64437904603676,1.65810010671509,1.15921234294021,0.296573126324121,0.267540828089713,0,0.793165398882963,0.383220493601921,1.37450978193052,0.759059076058509,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.255973222308837,2.49861453104692,1.4206635122641,0.821127996921047,0.604820229674197,0,0.144824403882799,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,2.07355300420312,3.31324420803713,2.78865462886844,2.07322110030741,2.77552935963191,2.18986415445498,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0.131124414959424,6.76799419361118,1.92538342761037,4.70609861506113,13.1525302187935,1.47772280450026,0,0.340187410553031,0.647747748306418,1.54227252690289,1.35473218771926,2.00675909541941,1.78413391131527,7.47968408035852,4.92524460388792,0,0,4.10320200186223,1.64007322849853,0.650756789328606,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,1.28188885352968,0,0,2.60124445176006,0.28853842595289,0.284567373393656,0.159426272728822,0.399158742865633,1.34053759092657,8.04359614350755,0.649243880549111,0,0.228234679033192,0,0,2.20079311142084,0.1605880751037,0,0.425846237690326,0,0,0.447352215784832,0,0,0,1.23087398947712,0.270455678475983,1.99843180798692,0,0,0,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0.614321404198464,0,0,0,13.8435254350478,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,6.35634125731916,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,0,0,0,0,0,3.06579894587209,0.470940769185074,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,1.99226682220855,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0.124252535565433,0.471388069233591,0.67952103036807,0.418411385249333,0,0,0,0,0,0,4.73197237702766,0,0,0,0.599037001496973,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,2.41129722697529,2.47570985875021,3.32352270423348,0,0,0,0,0.0788057072991982,0.419636705079985,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0.453248366080503,0,0,0.129282956361551,0,0,0,0,0,0.828478110694391,0,2.96417447846916,0.974340787047167,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.303298235083296,0,0.705797459094515,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0.779441235357554,0,0.327130788511688,0,0,0.422624246717254,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.345701962667338,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0.214429632529969,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,1.19370465096821,0,0,0.109940516745429,1.35866559210006,0,0.655678681511872,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0.178553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| ||
|short_description=p@chr17:73829077..73829123,- | |short_description=p@chr17:73829077..73829123,- | ||
}} | }} |
Latest revision as of 21:14, 25 July 2015
Short description: | p@chr17:73829077..73829123, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73829077..73829123, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.14e-32 | 10 |
nephron tubule epithelial cell | 4.14e-32 | 10 |
epithelial cell of nephron | 1.09e-29 | 15 |
kidney cell | 7.38e-26 | 17 |
kidney epithelial cell | 7.38e-26 | 17 |
kidney cortical cell | 6.54e-21 | 12 |
renal cortical epithelial cell | 6.54e-21 | 12 |
embryonic stem cell | 5.47e-17 | 5 |
brush border epithelial cell | 3.93e-11 | 3 |
kidney cortex tubule cell | 3.93e-11 | 3 |
epithelial cell of proximal tubule | 3.93e-11 | 3 |
glomerular cell | 2.00e-07 | 7 |
kidney corpuscule cell | 2.00e-07 | 7 |
mesangial cell | 3.09e-07 | 2 |
kidney interstitial cell | 3.09e-07 | 2 |
juxtaglomerular complex cell | 3.09e-07 | 2 |
renal interstitial pericyte | 3.09e-07 | 2 |
extraglomerular mesangial cell | 3.09e-07 | 2 |