FFCP PHASE1:Hg19::chr3:141043020..141043049,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253461|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26636|TSSclassifier=S|UniProt=D6RE69,Q8NAP3,Q9H6F0|association_with_transcript=-5bp_to_ENST00000509842,NM_001080412,uc003etw.2_5end|description=CAGE_peak_17_at_ZBTB38_5end|id=chr3:141043020..141043049,+|ontology_enrichment_celltype=CL:1000497!7.19e-20!18;CL:0002518!7.19e-20!18;CL:1000507!2.49e-18!12;CL:1000494!2.49e-18!12;CL:1000449!1.65e-13!16;CL:0002681!9.66e-09!13;CL:0002584!9.66e-09!13;CL:0000239!3.89e-07!3;CL:1000615!3.89e-07!3;CL:0002306!3.89e-07!3|ontology_enrichment_celltype_v019=CL:1000497;6.32e-27;17!CL:0002518;6.32e-27;17!CL:1000507;5.57e-26;10!CL:1000494;5.57e-26;10!CL:1000449;3.48e-17;15!CL:0000239;1.32e-10;3!CL:1000615;1.32e-10;3!CL:0002306;1.32e-10;3!CL:0002681;6.90e-10;12!CL:0002584;6.90e-10;12|ontology_enrichment_celltype_v019_2=CL:1000497,5.90e-27,17;CL:0002518,5.90e-27,17;CL:1000507,5.11e-26,10;CL:1000494,5.11e-26,10;CL:1000449,3.29e-17,15;CL:0000239,1.39e-10,3;CL:1000615,1.39e-10,3;CL:0002306,1.39e-10,3;CL:0002681,6.20e-10,12;CL:0002584,6.20e-10,12|ontology_enrichment_development_v019=UBERON:0003918;1.39e-12;10!UBERON:0007687;1.39e-12;10!UBERON:0001045;1.71e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.49e-23!55;UBERON:0005173!2.49e-23!55;UBERON:0002113!6.05e-23!27;UBERON:0003918!6.05e-23!27;UBERON:0005095!6.05e-23!27;UBERON:0007687!6.05e-23!27;UBERON:0002417!1.28e-20!61;UBERON:0000916!1.28e-20!61;UBERON:0000489!5.92e-19!32;UBERON:0009773!2.49e-18!12;UBERON:0001231!2.49e-18!12;UBERON:0004810!2.49e-18!12;UBERON:0006555!1.95e-16!17;UBERON:0005103!1.95e-16!17;UBERON:0000083!1.95e-16!17;UBERON:0009201!1.95e-16!17;UBERON:0004819!1.95e-16!17;UBERON:0006553!1.95e-16!17;UBERON:0003074!1.95e-16!17;UBERON:0003060!1.95e-16!17;UBERON:0000080!1.88e-15!18;UBERON:0002120!1.88e-15!18;UBERON:0004875!1.88e-15!18;UBERON:0005721!1.88e-15!18;UBERON:0005754!1.88e-15!18;UBERON:0007297!1.88e-15!18;UBERON:0004876!8.89e-14!20;UBERON:0004211!1.65e-13!16;UBERON:0001285!1.65e-13!16;UBERON:0007684!1.65e-13!16;UBERON:0003220!1.65e-13!16;UBERON:0004208!1.65e-13!16;UBERON:0006554!4.38e-13!44;UBERON:0003887!4.64e-13!21;UBERON:0000058!5.05e-13!26;UBERON:0001008!9.75e-13!45;UBERON:0005177!2.34e-11!107;UBERON:0009569!1.58e-10!113;UBERON:0009854!8.49e-09!23;UBERON:0003103!8.62e-09!69;UBERON:0001155!8.87e-09!9;UBERON:0001225!9.66e-09!13;UBERON:0008987!9.66e-09!13;UBERON:0009497!5.45e-08!25;UBERON:0000015!5.45e-08!25;UBERON:0002423!5.45e-08!25;UBERON:0006235!5.45e-08!25;UBERON:0004161!5.45e-08!25;UBERON:0009856!1.12e-07!26;UBERON:0000160!1.43e-07!27;UBERON:0000059!3.48e-07!11;UBERON:0006853!3.89e-07!3;UBERON:0007685!3.89e-07!3;UBERON:0004134!3.89e-07!3;UBERON:0001851!4.79e-07!16;UBERON:0008835!7.19e-07!22;UBERON:0003894!7.19e-07!22;UBERON:0003064!7.27e-07!37|ontology_enrichment_uberon_v019=UBERON:0002113;1.64e-29;24!UBERON:0011143;1.64e-29;24!UBERON:0004211;5.57e-26;10!UBERON:0009773;5.57e-26;10!UBERON:0001231;5.57e-26;10!UBERON:0004810;5.57e-26;10!UBERON:0000489;3.79e-24;29!UBERON:0006554;2.73e-23;30!UBERON:0001008;2.73e-23;30!UBERON:0000160;9.13e-20;17!UBERON:0006555;3.48e-17;15!UBERON:0004819;3.48e-17;15!UBERON:0001285;3.48e-17;15!UBERON:0007684;3.48e-17;15!UBERON:0005409;2.67e-15;22!UBERON:0002108;2.44e-14;4!UBERON:0001155;1.43e-13;9!UBERON:0005172;1.16e-12;52!UBERON:0005173;1.16e-12;52!UBERON:0000059;3.90e-11;11!UBERON:0002417;7.99e-11;58!UBERON:0000916;7.99e-11;58!UBERON:0006853;1.32e-10;3!UBERON:0007685;1.32e-10;3!UBERON:0004134;1.32e-10;3!UBERON:0001225;6.90e-10;12!UBERON:0008987;6.90e-10;12!UBERON:0004921;3.13e-09;33!UBERON:0001154;1.71e-08;1!UBERON:0001301;1.71e-08;1!UBERON:0001153;1.71e-08;1!UBERON:0009854;1.71e-08;1!UBERON:0001851;6.14e-08;15!UBERON:0000353;6.14e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.04e-33,26;UBERON:0003918,9.04e-33,26;UBERON:0011143,9.04e-33,26;UBERON:0005095,9.04e-33,26;UBERON:0007687,9.04e-33,26;UBERON:0000489,3.46e-27,31;UBERON:0004810,5.11e-26,10;UBERON:0006555,1.14e-21,16;UBERON:0004819,1.14e-21,16;UBERON:0005172,7.00e-21,54;UBERON:0005173,7.00e-21,54;UBERON:0000160,9.01e-20,17;UBERON:0002417,1.48e-18,60;UBERON:0000916,1.48e-18,60;UBERON:0006554,2.71e-17,47;UBERON:0004211,3.29e-17,15;UBERON:0009773,3.29e-17,15;UBERON:0001231,3.29e-17,15;UBERON:0001285,3.29e-17,15;UBERON:0007684,3.29e-17,15;UBERON:0004208,3.29e-17,15;UBERON:0001008,6.80e-17,48;UBERON:0002108,2.56e-14,4;UBERON:0001155,1.36e-13,9;UBERON:0005409,1.90e-13,25;UBERON:0005177,7.92e-12,101;UBERON:0003103,2.28e-11,68;UBERON:0000059,3.75e-11,11;UBERON:0006853,1.39e-10,3;UBERON:0007685,1.39e-10,3;UBERON:0004134,1.39e-10,3;UBERON:0009569,2.07e-10,112;UBERON:0001225,6.20e-10,12;UBERON:0008987,6.20e-10,12;UBERON:0001301,1.53e-08,1;UBERON:0001154,1.65e-08,1;UBERON:0001153,1.65e-08,1;UBERON:0001045,1.65e-08,1;UBERON:0001851,5.64e-08,15;UBERON:0000353,5.64e-08,15;UBERON:0003104,1.34e-07,160;UBERON:0009142,1.34e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80479845162965,3.92778219232515,3.13739907670742,0,14.3550215294311,0,0,0,0,0,0.501689773854853,2.54876273045038,0,1.11937377361089,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,1.61119057208048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,4.97630965539252,4.95362361218699,23.2191455074778,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.590564889088493,0,0,0,0,0,0,0,0,0,0,20.0954553612955,6.34700516433477,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.293104467356165,0,0,0,4.44825778499256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.605766559513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,41.2421699227567,12.8992955729504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,9.41524728916925,33.2210531966015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p17@ZBTB38}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=253461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26636 | |||
|TSSclassifier=S | |||
|UniProt=D6RE69,Q8NAP3,Q9H6F0 | |||
|association_with_transcript=-5bp_to_ENST00000509842,NM_001080412,uc003etw.2_5end | |||
|description=CAGE_peak_17_at_ZBTB38_5end | |||
|id=chr3:141043020..141043049,+ | |||
|ontology_enrichment_celltype=CL:1000497!7.19e-20!18;CL:0002518!7.19e-20!18;CL:1000507!2.49e-18!12;CL:1000494!2.49e-18!12;CL:1000449!1.65e-13!16;CL:0002681!9.66e-09!13;CL:0002584!9.66e-09!13;CL:0000239!3.89e-07!3;CL:1000615!3.89e-07!3;CL:0002306!3.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.32e-27;17!CL:0002518;6.32e-27;17!CL:1000507;5.57e-26;10!CL:1000494;5.57e-26;10!CL:1000449;3.48e-17;15!CL:0000239;1.32e-10;3!CL:1000615;1.32e-10;3!CL:0002306;1.32e-10;3!CL:0002681;6.90e-10;12!CL:0002584;6.90e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,5.90e-27,17;CL:0002518,5.90e-27,17;CL:1000507,5.11e-26,10;CL:1000494,5.11e-26,10;CL:1000449,3.29e-17,15;CL:0000239,1.39e-10,3;CL:1000615,1.39e-10,3;CL:0002306,1.39e-10,3;CL:0002681,6.20e-10,12;CL:0002584,6.20e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.39e-12;10!UBERON:0007687;1.39e-12;10!UBERON:0001045;1.71e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.49e-23!55;UBERON:0005173!2.49e-23!55;UBERON:0002113!6.05e-23!27;UBERON:0003918!6.05e-23!27;UBERON:0005095!6.05e-23!27;UBERON:0007687!6.05e-23!27;UBERON:0002417!1.28e-20!61;UBERON:0000916!1.28e-20!61;UBERON:0000489!5.92e-19!32;UBERON:0009773!2.49e-18!12;UBERON:0001231!2.49e-18!12;UBERON:0004810!2.49e-18!12;UBERON:0006555!1.95e-16!17;UBERON:0005103!1.95e-16!17;UBERON:0000083!1.95e-16!17;UBERON:0009201!1.95e-16!17;UBERON:0004819!1.95e-16!17;UBERON:0006553!1.95e-16!17;UBERON:0003074!1.95e-16!17;UBERON:0003060!1.95e-16!17;UBERON:0000080!1.88e-15!18;UBERON:0002120!1.88e-15!18;UBERON:0004875!1.88e-15!18;UBERON:0005721!1.88e-15!18;UBERON:0005754!1.88e-15!18;UBERON:0007297!1.88e-15!18;UBERON:0004876!8.89e-14!20;UBERON:0004211!1.65e-13!16;UBERON:0001285!1.65e-13!16;UBERON:0007684!1.65e-13!16;UBERON:0003220!1.65e-13!16;UBERON:0004208!1.65e-13!16;UBERON:0006554!4.38e-13!44;UBERON:0003887!4.64e-13!21;UBERON:0000058!5.05e-13!26;UBERON:0001008!9.75e-13!45;UBERON:0005177!2.34e-11!107;UBERON:0009569!1.58e-10!113;UBERON:0009854!8.49e-09!23;UBERON:0003103!8.62e-09!69;UBERON:0001155!8.87e-09!9;UBERON:0001225!9.66e-09!13;UBERON:0008987!9.66e-09!13;UBERON:0009497!5.45e-08!25;UBERON:0000015!5.45e-08!25;UBERON:0002423!5.45e-08!25;UBERON:0006235!5.45e-08!25;UBERON:0004161!5.45e-08!25;UBERON:0009856!1.12e-07!26;UBERON:0000160!1.43e-07!27;UBERON:0000059!3.48e-07!11;UBERON:0006853!3.89e-07!3;UBERON:0007685!3.89e-07!3;UBERON:0004134!3.89e-07!3;UBERON:0001851!4.79e-07!16;UBERON:0008835!7.19e-07!22;UBERON:0003894!7.19e-07!22;UBERON:0003064!7.27e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.64e-29;24!UBERON:0011143;1.64e-29;24!UBERON:0004211;5.57e-26;10!UBERON:0009773;5.57e-26;10!UBERON:0001231;5.57e-26;10!UBERON:0004810;5.57e-26;10!UBERON:0000489;3.79e-24;29!UBERON:0006554;2.73e-23;30!UBERON:0001008;2.73e-23;30!UBERON:0000160;9.13e-20;17!UBERON:0006555;3.48e-17;15!UBERON:0004819;3.48e-17;15!UBERON:0001285;3.48e-17;15!UBERON:0007684;3.48e-17;15!UBERON:0005409;2.67e-15;22!UBERON:0002108;2.44e-14;4!UBERON:0001155;1.43e-13;9!UBERON:0005172;1.16e-12;52!UBERON:0005173;1.16e-12;52!UBERON:0000059;3.90e-11;11!UBERON:0002417;7.99e-11;58!UBERON:0000916;7.99e-11;58!UBERON:0006853;1.32e-10;3!UBERON:0007685;1.32e-10;3!UBERON:0004134;1.32e-10;3!UBERON:0001225;6.90e-10;12!UBERON:0008987;6.90e-10;12!UBERON:0004921;3.13e-09;33!UBERON:0001154;1.71e-08;1!UBERON:0001301;1.71e-08;1!UBERON:0001153;1.71e-08;1!UBERON:0009854;1.71e-08;1!UBERON:0001851;6.14e-08;15!UBERON:0000353;6.14e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.04e-33,26;UBERON:0003918,9.04e-33,26;UBERON:0011143,9.04e-33,26;UBERON:0005095,9.04e-33,26;UBERON:0007687,9.04e-33,26;UBERON:0000489,3.46e-27,31;UBERON:0004810,5.11e-26,10;UBERON:0006555,1.14e-21,16;UBERON:0004819,1.14e-21,16;UBERON:0005172,7.00e-21,54;UBERON:0005173,7.00e-21,54;UBERON:0000160,9.01e-20,17;UBERON:0002417,1.48e-18,60;UBERON:0000916,1.48e-18,60;UBERON:0006554,2.71e-17,47;UBERON:0004211,3.29e-17,15;UBERON:0009773,3.29e-17,15;UBERON:0001231,3.29e-17,15;UBERON:0001285,3.29e-17,15;UBERON:0007684,3.29e-17,15;UBERON:0004208,3.29e-17,15;UBERON:0001008,6.80e-17,48;UBERON:0002108,2.56e-14,4;UBERON:0001155,1.36e-13,9;UBERON:0005409,1.90e-13,25;UBERON:0005177,7.92e-12,101;UBERON:0003103,2.28e-11,68;UBERON:0000059,3.75e-11,11;UBERON:0006853,1.39e-10,3;UBERON:0007685,1.39e-10,3;UBERON:0004134,1.39e-10,3;UBERON:0009569,2.07e-10,112;UBERON:0001225,6.20e-10,12;UBERON:0008987,6.20e-10,12;UBERON:0001301,1.53e-08,1;UBERON:0001154,1.65e-08,1;UBERON:0001153,1.65e-08,1;UBERON:0001045,1.65e-08,1;UBERON:0001851,5.64e-08,15;UBERON:0000353,5.64e-08,15;UBERON:0003104,1.34e-07,160;UBERON:0009142,1.34e-07,160 | |||
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|short_description=p17@ZBTB38 | |||
}} |
Revision as of 21:49, 12 September 2013
Short description: | p17@ZBTB38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_ZBTB38_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000509842, NM_001080412, uc003etw.2_5end |
EntrezGene: | ZBTB38 |
HGNC: | 26636 |
UniProt: | D6RE69Q8NAP3Q9H6F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 5.90e-27 | 17 |
kidney epithelial cell | 5.90e-27 | 17 |
kidney tubule cell | 5.11e-26 | 10 |
nephron tubule epithelial cell | 5.11e-26 | 10 |
epithelial cell of nephron | 3.29e-17 | 15 |
brush border epithelial cell | 1.39e-10 | 3 |
kidney cortex tubule cell | 1.39e-10 | 3 |
epithelial cell of proximal tubule | 1.39e-10 | 3 |
kidney cortical cell | 6.20e-10 | 12 |
renal cortical epithelial cell | 6.20e-10 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.