FF:10424-106D1: Difference between revisions

Revision as of 18:55, 9 July 2012

Name:	splenic lymphoma with villous lymphocytes cell line:SLVL
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	70 year old adult
sex	female
age	70
cell type	b cell
cell line	SLVL
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.206
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.516
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0414
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0523
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0369
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0924
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.159
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.23
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0.0414
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0174
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.172
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.194
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0121
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.499
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0817
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0414
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.414
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0277
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0.0791
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.204
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0.845
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10741

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00755
MA0003.1	MA0003.1	0.434
MA0004.1	MA0004.1	0.023
MA0006.1	MA0006.1	0.204
MA0007.1	MA0007.1	0.319
MA0009.1	MA0009.1	0.991
MA0014.1	MA0014.1	0.946
MA0017.1	MA0017.1	0.182
MA0018.2	MA0018.2	0.164
MA0019.1	MA0019.1	0.249
MA0024.1	MA0024.1	5.72802e-5
MA0025.1	MA0025.1	0.046
MA0027.1	MA0027.1	0.889
MA0028.1	MA0028.1	0.00197
MA0029.1	MA0029.1	0.69
MA0030.1	MA0030.1	0.412
MA0031.1	MA0031.1	0.489
MA0035.2	MA0035.2	0.956
MA0038.1	MA0038.1	0.165
MA0039.2	MA0039.2	0.566
MA0040.1	MA0040.1	0.159
MA0041.1	MA0041.1	0.156
MA0042.1	MA0042.1	0.16
MA0043.1	MA0043.1	0.11
MA0046.1	MA0046.1	0.183
MA0047.2	MA0047.2	0.966
MA0048.1	MA0048.1	0.53
MA0050.1	MA0050.1	5.56514e-14
MA0051.1	MA0051.1	5.69981e-8
MA0052.1	MA0052.1	0.547
MA0055.1	MA0055.1	0.093
MA0057.1	MA0057.1	0.518
MA0058.1	MA0058.1	0.00795
MA0059.1	MA0059.1	0.00248
MA0060.1	MA0060.1	6.65793e-4
MA0061.1	MA0061.1	4.38058e-9
MA0062.2	MA0062.2	4.80053e-6
MA0065.2	MA0065.2	0.0208
MA0066.1	MA0066.1	0.609
MA0067.1	MA0067.1	0.901
MA0068.1	MA0068.1	0.0815
MA0069.1	MA0069.1	0.471
MA0070.1	MA0070.1	0.954
MA0071.1	MA0071.1	0.32
MA0072.1	MA0072.1	0.132
MA0073.1	MA0073.1	0.775
MA0074.1	MA0074.1	0.884
MA0076.1	MA0076.1	1.90468e-4
MA0077.1	MA0077.1	0.261
MA0078.1	MA0078.1	0.2
MA0079.2	MA0079.2	0.13
MA0080.2	MA0080.2	1.10374e-4
MA0081.1	MA0081.1	0.0416
MA0083.1	MA0083.1	0.0715
MA0084.1	MA0084.1	0.176
MA0087.1	MA0087.1	0.469
MA0088.1	MA0088.1	0.00363
MA0090.1	MA0090.1	2.23316e-5
MA0091.1	MA0091.1	0.888
MA0092.1	MA0092.1	0.476
MA0093.1	MA0093.1	0.0246
MA0099.2	MA0099.2	0.135
MA0100.1	MA0100.1	0.14
MA0101.1	MA0101.1	9.64127e-9
MA0102.2	MA0102.2	0.276
MA0103.1	MA0103.1	0.107
MA0104.2	MA0104.2	2.88772e-4
MA0105.1	MA0105.1	1.03351e-9
MA0106.1	MA0106.1	8.54524e-4
MA0107.1	MA0107.1	1.09881e-8
MA0108.2	MA0108.2	2.06408e-10
MA0111.1	MA0111.1	0.42
MA0112.2	MA0112.2	0.299
MA0113.1	MA0113.1	0.551
MA0114.1	MA0114.1	0.0534
MA0115.1	MA0115.1	0.175
MA0116.1	MA0116.1	4.8727e-5
MA0117.1	MA0117.1	0.707
MA0119.1	MA0119.1	0.542
MA0122.1	MA0122.1	0.214
MA0124.1	MA0124.1	0.496
MA0125.1	MA0125.1	0.347
MA0131.1	MA0131.1	0.321
MA0135.1	MA0135.1	0.437
MA0136.1	MA0136.1	9.41026e-5
MA0137.2	MA0137.2	0.075
MA0138.2	MA0138.2	0.313
MA0139.1	MA0139.1	0.108
MA0140.1	MA0140.1	0.468
MA0141.1	MA0141.1	0.266
MA0142.1	MA0142.1	0.455
MA0143.1	MA0143.1	0.292
MA0144.1	MA0144.1	0.0891
MA0145.1	MA0145.1	0.533
MA0146.1	MA0146.1	0.697
MA0147.1	MA0147.1	2.05343e-4
MA0148.1	MA0148.1	0.574
MA0149.1	MA0149.1	0.178
MA0150.1	MA0150.1	0.495
MA0152.1	MA0152.1	0.526
MA0153.1	MA0153.1	0.104
MA0154.1	MA0154.1	0.00255
MA0155.1	MA0155.1	0.631
MA0156.1	MA0156.1	5.72192e-4
MA0157.1	MA0157.1	0.96
MA0159.1	MA0159.1	0.543
MA0160.1	MA0160.1	0.0545
MA0162.1	MA0162.1	0.912
MA0163.1	MA0163.1	2.1868e-11
MA0164.1	MA0164.1	0.466
MA0258.1	MA0258.1	0.103
MA0259.1	MA0259.1	0.0245

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10741

Novel motif	Logo	P-value
1	1	0.00799
10	10	0.0144
100	100	0.495
101	101	0.195
102	102	0.624
103	103	0.0876
104	104	0.433
105	105	0.675
106	106	0.957
107	107	0.717
108	108	0.747
109	109	0.0777
11	11	0.167
110	110	0.114
111	111	0.0149
112	112	0.104
113	113	0.671
114	114	0.207
115	115	0.623
116	116	0.627
117	117	0.0188
118	118	0.128
119	119	0.102
12	12	0.852
120	120	0.55
121	121	0.363
122	122	0.371
123	123	1.30856e-4
124	124	0.0615
125	125	0.67
126	126	0.117
127	127	0.509
128	128	0.347
129	129	0.39
13	13	0.0635
130	130	0.995
131	131	0.221
132	132	0.572
133	133	0.587
134	134	0.612
135	135	0.571
136	136	0.281
137	137	0.171
138	138	0.857
139	139	0.218
14	14	0.692
140	140	0.193
141	141	0.0628
142	142	0.65
143	143	0.304
144	144	0.516
145	145	0.179
146	146	0.426
147	147	0.0525
148	148	0.115
149	149	0.529
15	15	0.0523
150	150	0.972
151	151	0.924
152	152	0.0633
153	153	0.207
154	154	0.905
155	155	0.0875
156	156	0.959
157	157	0.247
158	158	0.315
159	159	0.337
16	16	0.785
160	160	0.136
161	161	0.00795
162	162	0.975
163	163	0.761
164	164	0.208
165	165	0.788
166	166	0.265
167	167	0.396
168	168	0.844
169	169	0.722
17	17	0.546
18	18	0.466
19	19	0.949
2	2	0.498
20	20	0.369
21	21	0.161
22	22	0.986
23	23	0.325
24	24	0.174
25	25	0.188
26	26	0.0839
27	27	0.742
28	28	0.696
29	29	0.0206
3	3	0.0885
30	30	0.0791
31	31	0.765
32	32	0.733
33	33	0.741
34	34	0.632
35	35	0.126
36	36	0.0175
37	37	0.329
38	38	0.335
39	39	0.547
4	4	0.665
40	40	0.387
41	41	0.653
42	42	0.114
43	43	0.282
44	44	0.167
45	45	0.409
46	46	0.19
47	47	0.0486
48	48	0.0903
49	49	0.16
5	5	0.644
50	50	0.952
51	51	0.671
52	52	0.428
53	53	0.35
54	54	0.767
55	55	0.957
56	56	0.75
57	57	0.081
58	58	0.136
59	59	0.662
6	6	0.886
60	60	0.814
61	61	0.0826
62	62	0.122
63	63	0.548
64	64	0.267
65	65	0.799
66	66	0.1
67	67	0.584
68	68	0.335
69	69	0.794
7	7	0.108
70	70	0.443
71	71	0.0238
72	72	0.264
73	73	0.96
74	74	0.551
75	75	0.00566
76	76	0.26
77	77	0.846
78	78	0.319
79	79	0.541
8	8	0.173
80	80	0.376
81	81	0.0625
82	82	0.867
83	83	0.64
84	84	0.215
85	85	0.877
86	86	0.24
87	87	0.319
88	88	0.794
89	89	0.668
9	9	0.639
90	90	0.0153
91	91	0.89
92	92	0.838
93	93	0.877
94	94	0.493
95	95	0.0446
96	96	0.24
97	97	0.271
98	98	0.374
99	99	0.23

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10741

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100104 lymphoma cell line sample
UBERON:0002106 spleen

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
0060058 (lymphoma)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002106 (spleen)
0002100 (trunk)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0005177 (trunk region element)
0004177 (hemopoietic organ)
0005057 (immune organ)
0005172 (abdomen element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002390 (hematopoietic system)
0002417 (abdominal segment of trunk)
0002193 (hemolymphoid system)
0000916 (abdomen)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100104 (lymphoma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0004872 (splanchnic layer of lateral plate mesoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr11:111249993..111250006,-!p1@POU2AF1!2.58!383.47!POU2AF1;;chr6:391743..391759,+!p1@IRF4!2.34!219.57!IRF4;;chr2:68592406..68592424,+!p1@PLEK!2.17!146.91!PLEK;;chr1:25291475..25291511,-!p2@RUNX3!2.14!137.42!RUNX3;;chr11:47400078..47400106,-!p1@SPI1!2.04!109.04!SPI1;;chr17:38020392..38020477,-!p1@IKZF3!1.92!82.55!IKZF3;;chr5:88178983..88179012,-!p1@MEF2C!1.90!576.36!MEF2C;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!1.90!78.25!MEF2B;;chr1:170632051..170632081,+!p16@PRRX1!1.85!69.86!PRRX1;;chr14:75988771..75988826,+!p1@BATF!1.73!69.16!BATF;;chr1:170632115..170632136,+!p9@PRRX1!1.70!49.07!PRRX1;;chr19:36204309..36204335,+!p1@ZBTB32!1.69!47.87!ZBTB32;;chr7:28452130..28452154,+!p10@CREB5!1.67!46.17!CREB5;;chr14:75988831..75988847,+!p2@BATF!1.67!45.27!BATF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.67!45.27!ZBED1;;chr1:170632028..170632043,+!p20@PRRX1!1.61!39.28!PRRX1;;chr16:85932760..85932775,+!p1@IRF8!1.57!36.38!IRF8;;chr1:3569072..3569093,+!p1@TP73!1.56!35.28!TP73;;chr5:88179017..88179046,-!p2@MEF2C!1.52!124.63!MEF2C;;chr2:231090433..231090469,+!p1@SP140!1.51!31.18!SP140;;chr2:68592394..68592405,+!p2@PLEK!1.48!29.18!PLEK;;chr1:170632285..170632309,+!p1@PRRX1!1.46!31.48!PRRX1;;chr19:50922187..50922204,+!p1@SPIB!1.46!27.58!SPIB;;chr1:25256756..25256774,-!p1@RUNX3!1.44!49.57!RUNX3;;chr3:101546827..101546847,+!p2@NFKBIZ!1.44!36.88!NFKBIZ;;chr12:103351444..103351461,+!p1@ASCL1!1.42!25.29!ASCL1;;chr1:25291620..25291635,-!p4@RUNX3!1.37!22.39!RUNX3;;chr1:170632137..170632172,+!p10@PRRX1!1.37!22.29!PRRX1;;chr2:231090471..231090504,+!p2@SP140!1.34!20.79!SP140;;chr2:68615031..68615055,+!p3@PLEK!1.31!19.19!PLEK;;chr20:50159198..50159299,-!p1@NFATC2!1.28!25.98!NFATC2;;chr4:185395590..185395627,-!p3@IRF2!1.27!21.79!IRF2;;chr12:103352277..103352324,+!p2@ASCL1!1.27!17.49!ASCL1;;chr11:47236584..47236679,+!p1@DDB2!1.26!182.39!DDB2;;chr10:35415951..35415975,+!p8@CREM!1.26!23.69!CREM;;chr19:44617476..44617478,+!p3@ZNF225!1.26!17.19!ZNF225;;chr19:50432453..50432468,+!p1@ATF5!1.24!890.38!ATF5;;chr8:135614084..135614119,-!p4@ZFAT!1.24!16.39!ZFAT;;chr7:28610099..28610113,+!p5@CREB5!1.24!16.29!CREB5;;chr5:158526917..158526932,-!p1@EBF1!1.23!39.58!EBF1;;chr5:142780237..142780261,-!p7@NR3C1!1.23!15.79!NR3C1;;chr8:72756667..72756736,-!p2@MSC!1.21!23.59!MSC;;chr12:54785074..54785122,-!p2@ZNF385A!1.19!22.49!ZNF385A;;chr5:88179518..88179569,-!p5@MEF2C!1.19!19.09!MEF2C;;chr15:60884706..60884743,-!p1@RORA!1.18!71.76!RORA;;chr5:142780189..142780223,-!p6@NR3C1!1.16!13.29!NR3C1;;chr19:42636586..42636607,-!p1@POU2F2!1.14!35.68!POU2F2;;chr16:85936412..85936431,+!p2@IRF8!1.14!12.79!IRF8;;chr19:45579725..45579743,-!p1@ZNF296!1.13!55.87!ZNF296;;chr1:151319654..151319698,-!p2@RFX5!1.13!27.58!RFX5;;chr8:135614120..135614149,-!p5@ZFAT!1.12!12.19!ZFAT;;chr10:104155480..104155534,+!p2@NFKB2!1.11!76.65!NFKB2;;chr8:72756637..72756664,-!p3@MSC!1.10!13.29!MSC;;chr7:50344251..50344288,+!p3@IKZF1!1.10!11.59!IKZF1;;chr9:126774018..126774055,+!p1@LHX2!1.09!11.19!LHX2;;chr2:61108695..61108753,+!p1@REL!1.08!77.05!REL;;chr4:26322267..26322334,+!p3@RBPJ!1.07!26.38!RBPJ;;chr12:54447599..54447630,+!p3@HOXC4!1.07!13.19!HOXC4;;chr16:85936539..85936562,+!p3@IRF8!1.07!10.79!IRF8;;chr1:170632250..170632277,+!p7@PRRX1!1.06!10.59!PRRX1;;chr18:52989031..52989079,-!p2@TCF4!1.05!24.39!TCF4;;chr19:19729477..19729542,-!p1@PBX4!1.04!21.79!PBX4;;chr4:185395633..185395651,-!p2@IRF2!1.03!15.79!IRF2;;chr14:75988851..75988862,+!p3@BATF!1.03!9.69!BATF;;chr7:50344289..50344323,+!p1@IKZF1!1.01!9.19!IKZF1;;chr2:214016254..214016282,-!p7@IKZF2!1.00!8.99!IKZF2;;chr13:41593425..41593480,-!p1@ELF1!0.99!56.67!ELF1;;chr12:11802753..11802834,+!p2@ETV6!0.99!44.37!ETV6;;chr2:214015111..214015179,-!p1@IKZF2!0.99!15.99!IKZF2;;chr17:38020557..38020572,-!p4@IKZF3!0.99!8.69!IKZF3;;chr9:117150254..117150271,-!p1@AKNA!0.98!23.99!AKNA;;chr11:615570..615721,-!p2@IRF7!0.98!17.19!IRF7;;chr7:128577972..128578047,+!p1@IRF5!0.98!13.59!IRF5;;chr11:19262421..19262455,-!p3@E2F8!0.98!8.59!E2F8;;chr6:106534192..106534224,+!p1@PRDM1!0.97!24.39!PRDM1;;chr8:72756063..72756125,-!p1@MSC!0.97!17.09!MSC;;chr7:50343634..50343717,+!p2@IKZF1!0.97!8.40!IKZF1;;chr12:54785054..54785072,-!p4@ZNF385A!0.96!9.29!ZNF385A;;chr1:14057463..14057496,+!p4@PRDM2!0.96!8.20!PRDM2;;chr1:25291648..25291665,-!p7@RUNX3!0.95!8.00!RUNX3;;chr16:31885093..31885165,+!p1@ZNF267!0.94!121.23!ZNF267;;chr5:133450365..133450444,+!p1@TCF7!0.94!36.28!TCF7;;chr8:135577829..135577861,-!p6@ZFAT!0.94!7.80!ZFAT;;chr10:104154246..104154347,+!p3@NFKB2!0.92!46.47!NFKB2;;chr1:170632439..170632465,+!p11@PRRX1!0.92!7.40!PRRX1;;chr2:231090344..231090361,-!p3@SP110!0.92!7.40!SP110;;chr9:2015335..2015370,+!p1@SMARCA2!0.91!89.85!SMARCA2;;chr9:2158443..2158481,+!p2@SMARCA2!0.91!20.99!SMARCA2;;chr6:106534230..106534254,+!p2@PRDM1!0.90!17.99!PRDM1;;chr10:64576105..64576133,-!p1@EGR2!0.90!14.69!EGR2;;chr19:42627037..42627084,-!p3@POU2F2!0.90!7.00!POU2F2;;chr4:109089901..109089930,-!p3@LEF1!0.90!6.90!LEF1;;chr2:68615063..68615089,+!p4@PLEK!0.89!6.80!PLEK;;chr1:167298300..167298319,+!p2@POU2F1!0.89!6.70!POU2F1;;chr5:88120151..88120177,-!p6@MEF2C!0.88!6.60!MEF2C;;chr9:2015306..2015323,+!p3@SMARCA2!0.87!17.49!SMARCA2;;chr4:26321361..26321377,+!p6@RBPJ!0.87!8.20!RBPJ;;chr11:47400062..47400077,-!p2@SPI1!0.87!6.40!SPI1;;chr1:170633348..170633399,+!p2@PRRX1!0.85!8.40!PRRX1;;chr4:106068026..106068084,+!p1@TET2!0.84!57.37!TET2;;chr5:142782823..142782854,-!p3@NR3C1!0.84!8.79!NR3C1;;chr2:214015343..214015366,-!p3@IKZF2!0.84!5.90!IKZF2;;chr2:148778973..148779035,+!p3@MBD5!0.83!15.89!MBD5;;chr1:158979686..158979745,+!p1@IFI16!0.82!200.08!IFI16;;chr1:170632477..170632506,+!p6@PRRX1!0.82!5.60!PRRX1;;chr5:158526756..158526797,-!p3@EBF1!0.82!5.60!EBF1;;chr7:64838786..64838809,+!p2@ZNF92!0.81!33.18!ZNF92;;chr5:321810..321877,+!p1@AHRR!0.81!18.59!AHRR;;chr8:135613895..135613921,-!p8@ZFAT!0.81!5.40!ZFAT;;chr19:50435736..50435781,+!p3@ATF5!0.79!7.40!ATF5;;chr7:50348268..50348366,+!p4@IKZF1!0.79!5.20!IKZF1;;chr6:41673552..41673571,-!p10@TFEB!0.79!5.10!TFEB;;chr7:115799942..115799955,-!p5@TFEC!0.78!5.00!TFEC;;chr2:214013461..214013517,-!p6@IKZF2!0.78!5.00!IKZF2;;chr3:141747459..141747475,-!p1@TFDP2!0.77!44.57!TFDP2;;chr18:51751066..51751077,-!p6@MBD2!0.77!7.60!MBD2;;chr6:41700616..41700664,-!p8@TFEB!0.77!4.90!TFEB;;chr20:46130619..46130664,+!p1@NCOA3!0.76!141.82!NCOA3;;chr2:61108650..61108687,+!p2@REL!0.76!25.68!REL;;chr17:41739283..41739297,-!p1@MEOX1!0.76!4.80!MEOX1;;chr6:106546731..106546755,+!p5@PRDM1!0.76!4.80!PRDM1;;chr3:141747950..141748004,-!p7@TFDP2!0.76!4.70!TFDP2;;chr12:54447637..54447659,+!p4@HOXC4!0.76!4.70!HOXC4;;chr1:3569135..3569150,+!p3@TP73!0.76!4.70!TP73;;chr20:56195474..56195506,-!p1@ZBP1!0.76!4.70!ZBP1;;chr11:615942..615957,-!p1@IRF7!0.75!48.37!IRF7;;chr2:68615096..68615115,+!p5@PLEK!0.75!4.60!PLEK;;chr5:142780280..142780294,-!p16@NR3C1!0.75!4.60!NR3C1;;chr10:35415978..35416050,+!p5@CREM!0.74!20.79!CREM;;chr3:178789993..178790049,-!p5@ZMAT3!0.74!6.80!ZMAT3;;chr9:37034469..37034474,-!p1@PAX5!0.74!4.50!PAX5;;chr12:77459306..77459365,-!p1@E2F7!0.73!61.26!E2F7;;chr7:28448965..28448994,+!p2@CREB5!0.73!16.89!CREB5;;chr5:88185134..88185147,-!p15@MEF2C!0.73!4.40!MEF2C;;chr11:19262461..19262476,-!p5@E2F8!0.73!4.40!E2F8;;chr10:35415882..35415941,+!p4@CREM!0.72!21.09!CREM;;chr19:1652555..1652568,-!p2@TCF3!0.72!19.39!TCF3;;chr15:74833584..74833626,+!p1@ARID3B!0.72!10.79!ARID3B;;chr5:124084466..124084484,-!p6@ZNF608!0.72!4.30!ZNF608;;chr9:126773880..126773895,+!p2@LHX2!0.72!4.30!LHX2;;chr1:170632108..170632114,+!p29@PRRX1!0.72!4.30!PRRX1;;chr7:28452103..28452108,+!p24@CREB5!0.72!4.20!CREB5;;chr7:64363638..64363667,+!p1@ZNF273!0.71!23.39!ZNF273;;chr11:47237922..47237964,+!p4@DDB2!0.71!4.90!DDB2;;chr5:124082580..124082603,-!p4@ZNF608!0.71!4.80!ZNF608;;chr18:52989001..52989030,-!p10@TCF4!0.71!4.60!TCF4;;chr9:37027156..37027193,-!p4@PAX5!0.71!4.10!PAX5;;chr19:20011744..20011770,+!p1@ZNF93!0.70!17.29!ZNF93;;chr6:106546808..106546833,+!p3@PRDM1!0.70!5.20!PRDM1;;chr6:41701581..41701613,-!p2@TFEB!0.70!4.00!TFEB;;chr10:96122645..96122675,-!p2@NOC3L!0.69!20.69!NOC3L;;chr17:41277372..41277418,-!p1@BRCA1!0.69!15.79!BRCA1;;chr18:52989081..52989117,-!p7@TCF4!0.69!6.30!TCF4;;chr8:72756267..72756296,-!p4@MSC!0.69!6.10!MSC;;chr12:103351813..103351844,+!p4@ASCL1!0.69!3.90!ASCL1;;chr1:3569101..3569115,+!p2@TP73!0.69!3.90!TP73;;chr10:96122682..96122730,-!p1@NOC3L!0.68!63.86!NOC3L;;chr19:20188776..20188826,+!p1@ZNF90!0.68!11.39!ZNF90;;chr1:170632683..170632696,+!p12@PRRX1!0.68!3.80!PRRX1;;chr6:34204973..34204990,+!p4@HMGA1!0.67!56.97!HMGA1;;chr7:77428066..77428132,+!p2@PHTF2!0.67!27.08!PHTF2;;chr7:28610060..28610073,+!p9@CREB5!0.67!3.70!CREB5;;chr8:135613849..135613883,-!p7@ZFAT!0.67!3.70!ZFAT;;chr1:3568928..3568946,+!p4@TP73!0.67!3.70!TP73;;chr19:19976683..19976709,+!p1@ZNF253!0.66!17.99!ZNF253;;chr1:3568961..3568973,+!p6@TP73!0.66!3.60!TP73;;chr5:142779999..142780026,-!p20@NR3C1!0.66!3.60!NR3C1;;chr6:152011654..152011682,+!p1@ESR1!0.66!3.60!ESR1;;chr9:2158487..2158498,+!p21@SMARCA2!0.66!3.60!SMARCA2;;chr9:3525910..3525955,-!p4@RFX3!0.65!11.69!RFX3;;chr12:51566562..51566584,-!p2@TFCP2!0.65!10.99!TFCP2;;chr5:88179195..88179224,-!p3@MEF2C!0.65!5.90!MEF2C;;chr19:926001..926046,+!p1@ARID3A!0.64!13.39!ARID3A;;chr2:231084659..231084721,-!p1@SP110!0.63!90.25!SP110;;chr14:55493763..55493824,-!p1@WDHD1!0.63!28.68!WDHD1;;chr19:45252008..45252024,+!p2@BCL3!0.63!12.29!BCL3;;chr19:20011775..20011800,+!p2@ZNF93!0.63!6.40!ZNF93;;chr1:170632723..170632739,+!p8@PRRX1!0.63!3.30!PRRX1;;chrX:47509928..47509990,-!p1@ELK1!0.62!117.13!ELK1;;chr1:117602932..117602973,+!p1@TTF2!0.62!13.69!TTF2;;chr6:12008986..12009016,+!p3@HIVEP1!0.62!11.39!HIVEP1;;chr8:135614159..135614170,-!p13@ZFAT!0.62!3.20!ZFAT;;chr17:40440359..40440386,+!p4@STAT5A!0.62!3.20!STAT5A;;chr4:109089095..109089144,-!p6@LEF1!0.62!3.20!LEF1;;chr7:64126503..64126528,+!p1@ZNF107!0.61!25.58!ZNF107;;chr5:124084493..124084524,-!p2@ZNF608!0.61!7.70!ZNF608;;chr1:23857698..23857733,-!p1@E2F2!0.61!6.30!E2F2;;chr4:87857491..87857519,+!p10@AFF1!0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F343!0.20!8.89!ZNF343;;chr19:47617013..47617069,-!p2@ZC3H4!0.20!8.00!ZC3H4;;chr19:53898380..53898422,+!p1@ZNF765!0.20!8.00!ZNF765;;chr8:28243661..28243709,-!p1@ZNF395!0.20!7.50!ZNF395;;chrX:47342565..47342638,-!p1@ZNF41!0.20!7.50!ZNF41;;chr12:80084333..80084380,-!p4@PAWR!0.20!6.30!PAWR;;chr21:30671211..30671234,+!p3@BACH1!0.20!6.20!BACH1;;chr18:72922777..72922808,+!p2@TSHZ1!0.20!6.00!TSHZ1;;chr19:47615477..47615491,-!p3@ZC3H4!0.20!5.50!ZC3H4;;chr19:40596828..40596855,-!p1@ZNF780A!0.20!5.30!ZNF780A;;chrX:129244840..129244881,-!p2@ELF4!0.20!4.70!ELF4;;chr8:86089369..86089408,+!p1@E2F5!0.20!3.10!E2F5;;chr17:1959369..1959388,+!p2@HIC1!0.20!3.00!HIC1;;chr9:3525727..3525828,-!p2@RFX3!0.20!2.90!RFX3;;chr9:128509635..128509658,+!p2@PBX3!0.20!1.90!PBX3;;chr16:31724618..31724630,+!p2@ZNF720!0.20!1.90!ZNF720;;chr19:2841497..2841523,+!p2@ZNF555!0.20!1.80!ZNF555;;chr12:6798692..6798723,-!p5@ZNF384!0.20!1.50!ZNF384;;chr15:57210759..57210775,+!p7@TCF12!0.20!1.30!TCF12;;chrX:76937858..76937877,-!p5@ATRX!0.20!1.20!ATRX;;chr22:21356345..21356367,-!p3@THAP7!0.20!1.10!THAP7;;chr10:98592751..98592765,+!p5@LCOR!0.20!1.00!LCOR;;chr9:2029144..2029164,+!p10@SMARCA2!0.20!1.00!SMARCA2;;chr7:148844205..148844236,+!p5@ZNF398!0.20!0.90!ZNF398;;chr1:6684918..6684936,+!p2@THAP3!0.20!0.90!THAP3;;chr19:50435673..50435690,+!p8@ATF5!0.20!0.60!ATF5;;chr19:53290078..53290089,-!p3@ZNF600!0.20!0.60!ZNF600;;chr1:158985686..158985719,+!p15@IFI16!0.20!0.60!IFI16;;chr1:25291275..25291301,-!p12@RUNX3!0.20!0.60!RUNX3;;chr1:61542922..61542955,+!p10@NFIA!0.20!0.60!NFIA;;chr20:52210553..52210568,-!p7@ZNF217!0.20!0.60!ZNF217;;chr5:158524951..158524969,-!p15@EBF1!0.20!0.60!EBF1;;chr6:155635647..155635658,-!p2@TFB1M!0.20!0.60!TFB1M;;chr6:28109726..28109735,+!p5@ZNF192!0.20!0.60!ZNF192;;chr7:115670804..115670825,-!p1@TFEC!0.20!0.60!TFEC;;chr7:128578070..128578077,+!p3@IRF5!0.20!0.60!IRF5;;chr7:27190547..27190591,-!p1@HOXA6!0.20!0.60!HOXA6;;chr7:99680193..99680204,-!p2@ZNF3!0.20!0.60!ZNF3;;chr8:102216978..102217003,-!p4@ZNF706!0.20!0.60!ZNF706;;chr8:28748961..28748996,+!p6@HMBOX1!0.20!0.60!HMBOX1;;chr8:72755203..72755239,-!p10@MSC!0.20!0.60!MSC;;chr2:214017053..214017065,-!p16@IKZF2!0.20!0.60!IKZF2;;chr3:189349162..189349207,+!p2@TP63!0.20!0.60!TP63;;chr9:126777702..126777716,+!p5@LHX2!0.20!0.60!LHX2;;chr10:64576035..64576046,-!p2@EGR2!0.20!0.60!EGR2;;chr10:98591637..98591643,+!p8@LCOR!0.20!0.60!LCOR;;chr14:45722418..45722426,-!p6@MIS18BP1!0.20!0.60!MIS18BP1;;chr19:20748614..20748617,-!p5@ZNF737!0.20!0.60!ZNF737;;chr22:42229100..42229146,+!p1@SREBF2!0.19!139.92!SREBF2;;chr5:131826457..131826514,-!p1@IRF1!0.19!54.37!IRF1;;chr13:20357063..20357105,-!p1@PSPC1!0.19!45.27!PSPC1;;chr11:62369291..62369351,-!p1@MTA2!0.19!25.48!MTA2;;chr2:113012592..113012671,-!p1@ZC3H8!0.19!23.59!ZC3H8;;chr11:62369229..62369289,-!p2@MTA2!0.19!19.99!MTA2;;chr6:155635583..155635644,-!p1@TFB1M!0.19!17.49!TFB1M;;chr21:30671235..30671253,+!p1@BACH1!0.19!17.29!BACH1;;chr1:151431909..151431987,-!p1@POGZ!0.19!16.09!POGZ;;chr16:3451184..3451264,+!p1@ZNF174!0.19!14.19!ZNF174;;chr3:179040767..179040866,+!p1@ZNF639!0.19!13.99!ZNF639;;chr12:53773944..53773993,+!p1@SP1!0.19!10.99!SP1;;chr5:142784003..142784065,-!p2@NR3C1!0.19!10.79!NR3C1;;chr8:135725249..135725292,-!p1@ZFAT!0.19!8.40!ZFAT;;chr17:5015129..5015187,-!p1@ZNF232!0.19!6.90!ZNF232;;chr6:41703296..41703367,-!p1@TFEB!0.19!6.30!TFEB;;chr3:129158854..129158883,-!p3@MBD4!0.19!6.30!MBD4;;chr17:47492252..47492265,-!p2@PHB!0.19!5.00!PHB;;chr2:208394817..208394834,+!p3@CREB1!0.19!4.90!CREB1;;chr19:57922521..57922550,+!p1@ZNF17!0.19!4.90!ZNF17;;chr19:9785724..9785740,-!p2@ZNF562!0.19!4.80!ZNF562;;chr18:45456800..45456886,-!p4@SMAD2!0.19!4.50!SMAD2;;chr19:37709076..37709154,+!p1@ZNF383!0.19!3.90!ZNF383;;chr1:40942922..40942997,+!p1@ZNF642!0.19!2.90!ZNF642;;chr20:306051..306096,+!p3@SOX12!0.19!2.90!SOX12;;chr17:38256932..38256965,-!p4@NR1D1!0.19!2.30!NR1D1;;chr19:21950332..21950356,-!p2@ZNF100!0.19!2.20!ZNF100;;chr5:76383070..76383117,-!p3@ZBED3!0.19!2.00!ZBED3;;chr1:35657108..35657135,-!p5@SFPQ!0.19!1.90!SFPQ;;chr19:20150268..20150298,-!p2@ZNF682!0.19!1.80!ZNF682;;chr3:107241993..107242023,+!p4@BBX!0.19!1.70!BBX;;chr10:97890262..97890298,+!p4@ZNF518A!0.19!1.70!ZNF518A;;chr1:8923998..8924033,-!p8@ENO1!0.19!1.70!ENO1;;chr16:88636835..88636846,+!p2@ZC3H18!0.19!1.60!ZC3H18;;chr19:58987786..58987805,+!p3@ZNF446!0.19!1.20!ZNF446;;chr10:43134047..43134079,-!p3@ZNF33B!0.19!1.10!ZNF33B;;chr12:11802547..11802560,+!p5@ETV6!0.19!1.10!ETV6;;chr14:24025106..24025172,-!p2@ZFHX2!0.19!1.00!ZFHX2;;chr1:211432872..211432883,+!p7@RCOR3!0.19!1.00!RCOR3;;chr19:37998036..37998098,+!p2@ZNF793!0.19!0.90!ZNF793;;chr12:80083807..80083859,-!p11@PAWR!0.19!0.90!PAWR;;chr19:19779686..19779697,+!p3@ZNF101!0.19!0.80!ZNF101;;chr19:12902289..12902307,+!p1@JUNB!0.18!320.51!JUNB;;chr2:70314601..70314622,+!p1@PCBP1!0.18!314.91!PCBP1;;chr2:219524310..219524385,-!p1@ZNF142!0.18!19.39!ZNF142;;chr1:247095194..247095235,-!p1@AHCTF1!0.18!13.99!AHCTF1;;chr19:42724436..42724507,+!p1@ZNF526!0.18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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0006603,UBERON:0004872,UBERON:0010316
 |fonse_cell_line=FF:0100104
 |fonse_cell_line_closure=FF:0100104

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FF:10424-106D1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 18:55, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0