FFCP PHASE1:Mm9::chr1:135027946..135027959,+: Difference between revisions
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{{FFCP|EntrezGene=108954|HGNC=|UniProt=|association_with_transcript=25bp_to_ENSMUST00000122956,uc007cps.2_5end|description=CAGE_peak_5_at_Ppp1r15b_5end|id=chr1:135027946..135027959,+|ontology_enrichment_celltype=CL:0000063!1.88e-08!66|ontology_enrichment_celltype_v019_2=CL:0000838,9.16e-07,12;CL:0000988,9.35e-07,32;CL:0002032,9.35e-07,32;CL:0000037,9.35e-07,32;CL:0000837,9.35e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.24e-15!130;UBERON:0000925!5.24e-15!130;UBERON:0006595!5.24e-15!130;UBERON:0001007!1.96e-14!128;UBERON:0001555!1.96e-14!128;UBERON:0007026!1.96e-14!128;UBERON:0004921!8.65e-14!126;UBERON:0004185!8.65e-14!126;UBERON:0003929!9.02e-13!55;UBERON:0005057!1.98e-12!51;UBERON:0002405!4.74e-11!70;UBERON:0005911!1.66e-10!69;UBERON:0000490!2.89e-10!66;UBERON:0001041!2.42e-09!92;UBERON:0000077!2.79e-09!97;UBERON:0004177!5.85e-09!29;UBERON:0002530!3.74e-08!65;UBERON:0000949!4.91e-08!72;UBERON:0003408!1.06e-07!24;UBERON:0004923!1.22e-07!24;UBERON:0002370!1.86e-07!23;UBERON:0000974!1.86e-07!23;UBERON:0004807!1.86e-07!23;UBERON:0005058!1.86e-07!23;UBERON:0003351!1.86e-07!23;UBERON:0009113!1.86e-07!23;UBERON:0003295!1.86e-07!23;UBERON:0009722!1.86e-07!23;UBERON:0005562!1.86e-07!23;UBERON:0007690!1.86e-07!23;UBERON:0002390!2.05e-07!45;UBERON:0003061!2.05e-07!45;UBERON:0002193!2.90e-07!48;UBERON:0002368!3.12e-07!60;UBERON:0006562!4.66e-07!24;UBERON:0001557!4.66e-07!24;UBERON:0001042!4.66e-07!24;UBERON:0008814!4.66e-07!24;UBERON:0009145!4.66e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.40e-13,118;UBERON:0000925,1.40e-13,118;UBERON:0006595,1.40e-13,118;UBERON:0001007,4.89e-13,116;UBERON:0001555,4.89e-13,116;UBERON:0007026,4.89e-13,116;UBERON:0003929,7.22e-13,55;UBERON:0004921,2.02e-12,114;UBERON:0005911,1.38e-10,69;UBERON:0000490,2.32e-10,66;UBERON:0004177,5.05e-09,29;UBERON:0005057,5.05e-09,29;UBERON:0001041,1.98e-08,80;UBERON:0002530,2.97e-08,65;UBERON:0000949,3.93e-08,72;UBERON:0003408,9.38e-08,24;UBERON:0000077,1.02e-07,35;UBERON:0002390,1.07e-07,45;UBERON:0003061,1.07e-07,45;UBERON:0004923,1.08e-07,24;UBERON:0002193,1.27e-07,48;UBERON:0002405,1.27e-07,48;UBERON:0002370,1.65e-07,23;UBERON:0000974,1.65e-07,23;UBERON:0004807,1.65e-07,23;UBERON:0005058,1.65e-07,23;UBERON:0003351,1.65e-07,23;UBERON:0009113,1.65e-07,23;UBERON:0003295,1.65e-07,23;UBERON:0009722,1.65e-07,23;UBERON:0005562,1.65e-07,23;UBERON:0007690,1.65e-07,23;UBERON:0002368,2.54e-07,60;UBERON:0006562,4.17e-07,24;UBERON:0001557,4.17e-07,24;UBERON:0001042,4.17e-07,24;UBERON:0008814,4.17e-07,24;UBERON:0009145,4.17e-07,24|phase1_expression=0.960893082628764,3.48975407639361,4.09499315450582,3.32710632437513,7.01254021924886,5.03637815735669,3.97141489012394,3.74457637980571,9.714421828465,14.7460651582856,3.76679530096111,4.54701306273417,4.10881751834894,5.50748535239684,3.99731714178795,2.63217847606774,7.69518065940961,2.5236973228659,4.38766187538364,4.2438965179803,1.27564935226605,3.3758923408301,1.82839852397255,3.51983330145495,2.75291137280604,2.29692785646008,2.15380998079537,2.80112602491656,4.18051522804023,6.04872311423834,4.43461021310609,1.27006134691926,5.53558308826113,0,1.73310971850765,1.16364251750945,1.42918549383658,7.11503772252743,6.2506827561904,4.18818995179039,6.47054636834116,8.87959130445979,5.34061388334269,0.503587271902309,0.405507724878058,1.10128051297009,3.12956537739216,1.09012578190223,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,3.85899993932794,8.70434570413613,4.7053131879945,1.02903774414379,1.14613375975503,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,1.69422266034566,1.77858959222228,0.899899717281399,0,1.4209602298922,0.599200221036809,0.768436610643109,0.622137673850866,0.675029691658453,1.26194976810829,1.42825492201902,1.32521124570968,0.857435594504678,0.862609239164127,0,3.30347642998166,0.893811366596314,0.921639199537461,0.791317726381163,1.37231465403614,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,0.883885756421003,1.56608848879013,1.3047961207771,1.06016670666458,1.28471652181535,1.15945795480671,4.30211938490693,4.75979933595425,2.69851595818909,3.89865850468601,3.13618820968135,2.66844398250329,3.40860645156115,2.07828803682295,1.41335829804136,2.67602497575693,6.41632387071589,5.09610479413291,7.11066703153331,1.08245520505607,1.26679932737549,1.01104889002957,2.51204535381932,0.258937883647172,1.33597925158342,1.73485326766136,1.21786191324856,0.461230994512117,1.20578112442098,1.76383060703557,1.13099932196708,3.70792451601561,3.18118585223806,1.76922110389975,1.45590164952668,3.3126227769059,1.93950101254089,1.86391761218122,0.878342391034642,1.67557365450764,3.83185582812887,5.27186547826049,7.19883277192089,4.57452817463033,1.3481157546434,1.83000241127451,1.00523481690292,0.521472960576829,1.02286182932132,2.28566849015516,1.1356888414743,1.32391173005411,2.23932547098167,1.76905930903572,2.31486041475121,1.04096354370163,0.229902104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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108954 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENSMUST00000122956,uc007cps.2_5end | |||
|cluster_id=chr1:135027946..135027959,+ | |||
|description=CAGE_peak_5_at_Ppp1r15b_5end | |||
|id=chr1:135027946..135027959,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.88e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.16e-07,12;CL:0000988,9.35e-07,32;CL:0002032,9.35e-07,32;CL:0000037,9.35e-07,32;CL:0000837,9.35e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.24e-15!130;UBERON:0000925!5.24e-15!130;UBERON:0006595!5.24e-15!130;UBERON:0001007!1.96e-14!128;UBERON:0001555!1.96e-14!128;UBERON:0007026!1.96e-14!128;UBERON:0004921!8.65e-14!126;UBERON:0004185!8.65e-14!126;UBERON:0003929!9.02e-13!55;UBERON:0005057!1.98e-12!51;UBERON:0002405!4.74e-11!70;UBERON:0005911!1.66e-10!69;UBERON:0000490!2.89e-10!66;UBERON:0001041!2.42e-09!92;UBERON:0000077!2.79e-09!97;UBERON:0004177!5.85e-09!29;UBERON:0002530!3.74e-08!65;UBERON:0000949!4.91e-08!72;UBERON:0003408!1.06e-07!24;UBERON:0004923!1.22e-07!24;UBERON:0002370!1.86e-07!23;UBERON:0000974!1.86e-07!23;UBERON:0004807!1.86e-07!23;UBERON:0005058!1.86e-07!23;UBERON:0003351!1.86e-07!23;UBERON:0009113!1.86e-07!23;UBERON:0003295!1.86e-07!23;UBERON:0009722!1.86e-07!23;UBERON:0005562!1.86e-07!23;UBERON:0007690!1.86e-07!23;UBERON:0002390!2.05e-07!45;UBERON:0003061!2.05e-07!45;UBERON:0002193!2.90e-07!48;UBERON:0002368!3.12e-07!60;UBERON:0006562!4.66e-07!24;UBERON:0001557!4.66e-07!24;UBERON:0001042!4.66e-07!24;UBERON:0008814!4.66e-07!24;UBERON:0009145!4.66e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.40e-13,118;UBERON:0000925,1.40e-13,118;UBERON:0006595,1.40e-13,118;UBERON:0001007,4.89e-13,116;UBERON:0001555,4.89e-13,116;UBERON:0007026,4.89e-13,116;UBERON:0003929,7.22e-13,55;UBERON:0004921,2.02e-12,114;UBERON:0005911,1.38e-10,69;UBERON:0000490,2.32e-10,66;UBERON:0004177,5.05e-09,29;UBERON:0005057,5.05e-09,29;UBERON:0001041,1.98e-08,80;UBERON:0002530,2.97e-08,65;UBERON:0000949,3.93e-08,72;UBERON:0003408,9.38e-08,24;UBERON:0000077,1.02e-07,35;UBERON:0002390,1.07e-07,45;UBERON:0003061,1.07e-07,45;UBERON:0004923,1.08e-07,24;UBERON:0002193,1.27e-07,48;UBERON:0002405,1.27e-07,48;UBERON:0002370,1.65e-07,23;UBERON:0000974,1.65e-07,23;UBERON:0004807,1.65e-07,23;UBERON:0005058,1.65e-07,23;UBERON:0003351,1.65e-07,23;UBERON:0009113,1.65e-07,23;UBERON:0003295,1.65e-07,23;UBERON:0009722,1.65e-07,23;UBERON:0005562,1.65e-07,23;UBERON:0007690,1.65e-07,23;UBERON:0002368,2.54e-07,60;UBERON:0006562,4.17e-07,24;UBERON:0001557,4.17e-07,24;UBERON:0001042,4.17e-07,24;UBERON:0008814,4.17e-07,24;UBERON:0009145,4.17e-07,24 | |||
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| |||
|short_description=p5@Ppp1r15b | |||
}} |
Revision as of 19:16, 4 August 2015
Short description: | p5@Ppp1r15b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ppp1r15b_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000122956, uc007cps.2_5end |
EntrezGene: | 108954 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.16e-07 | 12 |
hematopoietic cell | 9.35e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.35e-07 | 32 |
hematopoietic stem cell | 9.35e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.35e-07 | 32 |