FFCP PHASE1:Hg19::chr8:127570676..127570690,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24166 | |||
|TSSclassifier=strong | |||
|UniProt=Q96KN1 | |||
|association_with_transcript=20bp_to_NM_174911_5end | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_4_at_FAM84B_5end | |||
|id=chr8:127570676..127570690,- | |||
|ontology_enrichment_celltype=CL:0000066!7.30e-25!254;CL:1000497!8.25e-07!18;CL:0002518!8.25e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.23e-10;15!CL:0002681;5.54e-09;12!CL:0002584;5.54e-09;12!CL:1000497;8.31e-09;17!CL:0002518;8.31e-09;17!CL:0000540;1.50e-07;6!CL:0000404;1.50e-07;6!CL:0000349;4.05e-07;19!CL:1000507;7.61e-07;10!CL:1000494;7.61e-07;10!CL:0002319;7.67e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.71e-15,253;CL:1000449,1.82e-10,15;CL:0000047,2.78e-10,8;CL:0002681,4.63e-09,12;CL:0002584,4.63e-09,12;CL:1000497,6.97e-09,17;CL:0002518,6.97e-09,17;CL:0000540,8.35e-08,6;CL:0000031,8.35e-08,6;CL:0000404,8.35e-08,6;CL:0000349,3.94e-07,19;CL:0002319,6.07e-07,25;CL:1000507,7.26e-07,10;CL:1000494,7.26e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-07;6 | |||
|ontology_enrichment_disease=DOID:305!4.82e-17!106;DOID:0050687!6.17e-15!143;DOID:299!3.85e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.60e-10;25!DOID:3095;3.07e-07;22!DOID:2994;3.07e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.48e-10,25;DOID:0050687,1.26e-07,143;DOID:305,2.19e-07,106;DOID:3095,3.21e-07,22;DOID:2994,3.21e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000064!5.71e-09!219;UBERON:0000924!1.94e-08!173;UBERON:0006601!1.94e-08!173;UBERON:0000464!1.18e-07!104;UBERON:0000489!1.34e-07!32;UBERON:0002113!2.04e-07!27;UBERON:0003918!2.04e-07!27;UBERON:0005095!2.04e-07!27;UBERON:0007687!2.04e-07!27;UBERON:0007625!2.18e-07!11;UBERON:0004121!3.35e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.27e-13;11!UBERON:0002113;5.95e-11;24!UBERON:0011143;5.95e-11;24!UBERON:0006555;2.23e-10;15!UBERON:0004819;2.23e-10;15!UBERON:0001285;2.23e-10;15!UBERON:0007684;2.23e-10;15!UBERON:0002104;1.13e-09;21!UBERON:0001225;5.54e-09;12!UBERON:0008987;5.54e-09;12!UBERON:0000970;6.63e-09;20!UBERON:0001456;2.13e-08;21!UBERON:0000353;2.32e-08;15!UBERON:0000489;2.52e-08;29!UBERON:0001851;3.54e-08;15!UBERON:0001032;5.17e-08;24!UBERON:0004456;5.17e-08;24!UBERON:0000019;5.49e-08;19!UBERON:0000047;5.49e-08;19!UBERON:0004088;5.49e-08;19!UBERON:0010230;5.49e-08;19!UBERON:0006554;6.54e-08;30!UBERON:0001008;6.54e-08;30!UBERON:0002050;1.07e-07;5!UBERON:0005423;1.07e-07;5!UBERON:0000020;2.55e-07;23!UBERON:0000488;3.40e-07;4!UBERON:0004211;7.61e-07;10!UBERON:0009773;7.61e-07;10!UBERON:0001231;7.61e-07;10!UBERON:0004810;7.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.71e-13,11;UBERON:0004211,1.82e-10,15;UBERON:0009773,1.82e-10,15;UBERON:0001231,1.82e-10,15;UBERON:0001285,1.82e-10,15;UBERON:0007684,1.82e-10,15;UBERON:0004208,1.82e-10,15;UBERON:0002113,9.13e-10,26;UBERON:0003918,9.13e-10,26;UBERON:0011143,9.13e-10,26;UBERON:0005095,9.13e-10,26;UBERON:0007687,9.13e-10,26;UBERON:0006555,1.27e-09,16;UBERON:0004819,1.27e-09,16;UBERON:0000970,1.34e-09,21;UBERON:0002104,1.34e-09,21;UBERON:0001456,4.15e-09,22;UBERON:0001225,4.63e-09,12;UBERON:0008987,4.63e-09,12;UBERON:0000019,1.02e-08,20;UBERON:0000047,1.02e-08,20;UBERON:0010312,1.02e-08,20;UBERON:0004088,1.02e-08,20;UBERON:0010230,1.02e-08,20;UBERON:0003072,1.02e-08,20;UBERON:0004128,1.02e-08,20;UBERON:0003071,1.02e-08,20;UBERON:0005631,1.47e-08,14;UBERON:0000158,1.47e-08,14;UBERON:0006554,1.56e-08,47;UBERON:0000353,1.78e-08,15;UBERON:0001851,2.38e-08,15;UBERON:0001008,3.10e-08,48;UBERON:0000020,5.95e-08,24;UBERON:0001032,5.95e-08,24;UBERON:0004456,5.95e-08,24;UBERON:0000489,1.61e-07,31;UBERON:0003124,1.92e-07,7;UBERON:0004121,2.35e-07,171;UBERON:0000924,2.35e-07,171;UBERON:0006601,2.35e-07,171;UBERON:0000488,3.09e-07,4;UBERON:0001781,5.04e-07,4;UBERON:0004810,7.26e-07,10 | |||
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| |||
|short_description=p4@FAM84B | |||
}} |
Revision as of 23:44, 22 January 2014
Short description: | p4@FAM84B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM84B_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 20bp_to_NM_174911_5end |
EntrezGene: | FAM84B |
HGNC: | 24166 |
UniProt: | Q96KN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.71e-15 | 253 |
epithelial cell of nephron | 1.82e-10 | 15 |
neuronal stem cell | 2.78e-10 | 8 |
kidney cortical cell | 4.63e-09 | 12 |
renal cortical epithelial cell | 4.63e-09 | 12 |
kidney cell | 6.97e-09 | 17 |
kidney epithelial cell | 6.97e-09 | 17 |
neuron | 8.35e-08 | 6 |
neuroblast | 8.35e-08 | 6 |
electrically signaling cell | 8.35e-08 | 6 |
extraembryonic cell | 3.94e-07 | 19 |
neural cell | 6.07e-07 | 25 |
kidney tubule cell | 7.26e-07 | 10 |
nephron tubule epithelial cell | 7.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.48e-10 | 25 |
cell type cancer | 1.26e-07 | 143 |
carcinoma | 2.19e-07 | 106 |
germ cell and embryonal cancer | 3.21e-07 | 22 |
germ cell cancer | 3.21e-07 | 22 |