FFCP PHASE1:Hg19::chr3:177159744..177159791,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000439009_5end | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_1_at_ENST00000439009_5end | |||
|id=chr3:177159744..177159791,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.51e-13!180;CL:0000057!1.16e-11!75;CL:0002620!3.73e-10!23;CL:0002334!2.56e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.47e-13;23!CL:0002622;8.47e-08;3!CL:0002615;1.02e-07;3!CL:0002579;2.18e-07;3!CL:0002504;3.79e-07;3!CL:1000279;3.79e-07;3!CL:1000280;3.79e-07;3!CL:0000197;9.64e-07;6!CL:0000098;9.64e-07;6!CL:0002167;9.64e-07;6!CL:0002580;9.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.44e-13,23;CL:0000057,3.26e-10,76;CL:0002622,8.57e-08,3;CL:0002615,9.98e-08,3;CL:0002579,2.30e-07,3;CL:0002504,3.80e-07,3;CL:1000279,3.80e-07,3;CL:1000280,3.80e-07,3;CL:0000197,9.65e-07,6;CL:0000098,9.65e-07,6;CL:0002167,9.65e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.44e-08!5;DOID:450!9.44e-08!5;DOID:66!9.44e-08!5;DOID:423!9.44e-08!5;DOID:0080000!9.44e-08!5;DOID:11722!9.44e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.91e-11;5!DOID:450;1.91e-11;5!DOID:66;1.91e-11;5!DOID:423;1.91e-11;5!DOID:0080000;1.91e-11;5!DOID:11722;1.91e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.76e-11,5;DOID:450,1.76e-11,5;DOID:66,1.76e-11,5;DOID:423,1.76e-11,5;DOID:0080000,1.76e-11,5;DOID:11722,1.76e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.72e-09!6;UBERON:0002358!5.72e-09!6;UBERON:0003684!5.72e-09!6;UBERON:0001178!5.72e-09!6;UBERON:0005156!1.64e-07!59;UBERON:0000990!1.64e-07!59;UBERON:0004457!2.07e-07!12;UBERON:0000042!2.07e-07!12;UBERON:0000059!4.81e-07!11;UBERON:0003102!5.34e-07!95;UBERON:0001155!6.76e-07!9;UBERON:0000475!8.61e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.93e-13;6!UBERON:0002358;1.93e-13;6!UBERON:0003684;1.93e-13;6!UBERON:0001178;1.93e-13;6!UBERON:0000160;1.18e-11;17!UBERON:0000059;5.41e-11;11!UBERON:0001155;1.49e-10;9!UBERON:0005409;4.03e-10;22!UBERON:0004457;1.25e-08;9!UBERON:0000042;1.25e-08;9!UBERON:0004921;4.28e-08;33!UBERON:0003937;8.00e-08;12!UBERON:0005399;8.00e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.00e-13,6;UBERON:0002358,2.00e-13,6;UBERON:0003684,2.00e-13,6;UBERON:0001178,2.00e-13,6;UBERON:0000160,9.60e-12,17;UBERON:0000059,4.42e-11,11;UBERON:0001155,1.21e-10,9;UBERON:0001046,3.44e-09,19;UBERON:0005409,1.08e-08,25;UBERON:0000162,1.93e-08,14;UBERON:0001353,1.93e-08,14;UBERON:0000163,1.93e-08,14;UBERON:0006866,1.93e-08,14;UBERON:0000164,1.93e-08,14;UBERON:0000931,1.93e-08,14;UBERON:0003937,7.88e-08,12;UBERON:0005399,7.88e-08,12;UBERON:0004122,8.97e-08,15;UBERON:0003102,1.99e-07,99;UBERON:0002097,3.29e-07,41;UBERON:0005156,3.44e-07,59;UBERON:0000990,3.44e-07,59;UBERON:0002199,4.24e-07,46;UBERON:0002416,4.24e-07,46 | |||
|phase1_expression=10.5373459976923,9.42042305120326,11.2763523276777,35.0256544235956,25.9237434767827,0,7.59899634504932,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0,4.07491137921514,0.286235987131057,0,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0.50133791063589,3.33146993609895,0,0.486634870302636,0,0.221729397462564,0.351339142772504,1.76821751921912,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42907919878425,0,2.78979609174567,0,0,2.73048408581408,1.43723628363248,0,0.125118519871964,2.49357703935765,0,0.30648779579902,0,0,4.48474089222155,12.813443329114,23.3125091275518,12.3037349394605,42.972904692429,5.66809188100384,6.32797311527405,5.73839529620305,12.277062650311,9.59248342127635,38.3848077338388,5.33431987502079,0.355009592516614,0.604512589365842,11.1909990924922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68053230485111,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.723906533337896,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33113834266366,0,0,151.402787194428,120.617996426881,71.4391940103724,136.235465636525,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,5.45837177201309,4.29693525206575,3.08726103876381,3.20347873139252,39.9131654272029,19.4633244583765,0,0.154209693802656,0.532685175939381,0.246381468041427,0,0.232420756919918,0,0,0,32.4924888305837,14.9314757765508,29.371868950911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0.183138929636687,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.445160178233687,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,1.535386747868,6.84702380854273,0,0,7.55464321849922,11.2560182191782,4.3590588867904,0.202182481573316,0,0,13.6537446945085,0,0,2.59349831675173,8.20151505331534,0,1.10273068709225,0,0,2.31510213706675,7.87073702455959,0.202910376962704,0,1.12678241012897,0,0.0982490410131212,0,2.48332744849418,0,0.658589785919804,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,6.07824614168525,0,0.715880777515084,0,39.5020276330495,0,0,0,3.15658898038188,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00176680274681,0,0,0,0,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,5.83819925722038,1.83309043480088,0,0,0,0,0,0,0,0,0,1.57833761139756,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,12.2206160775408,0,0,0,0,0,0,0,7.25740182113799,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,1.95497680890578,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,1.43944664511834,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,1.08599920350743,4.32110745600634,0.979762080328227,1.19730191562487,0,0,0,0,0,0,0,0,0,0.747511887973863,0.943225830597996,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16856654923612,0,0,0,0,0,0.453692771289717,0.621748802331122,0.443565449968902,0.159296767163702,0,2.79473322377267,0.414706207840855,1.86089200190596,0,0.300515217994437,0,2.03435366602331,0,0.859284456339908,0,0.398095888698616,0,0.343395705182793,1.6837474438296,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.0529445968896,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,3.53218917827313,0,0,6.39211104356647,0,0,0,0,0,0,26.4564750360983,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,29.8489427851697,0,0,0,3.70435958918134,4.15263164957519,0,3.92237314806249,0,0,0,0,1.18948980281472,0.657887425858975,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0,5.81929524566941,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0,0,0,1.0661699095049,0.23806443146374,0,0,0,0,0.202117188958219,0.217716747896961,0.684466602170562,0.26940821205835,3.51438806424114,1.33064142618405,0,0,1.9307228228694,0,4.69281884806909,8.43465964861779,0.406896178315738,3.32878387092756,0,0 | |||
|short_description=p1@ENST00000439009 | |||
}} |
Revision as of 22:43, 21 January 2014
Short description: | p1@ENST00000439009 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000439009_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | 0bp_to_ENST00000439009_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.44e-13 | 23 |
fibroblast | 3.26e-10 | 76 |
prostate stromal cell | 8.57e-08 | 3 |
adipocyte of omentum tissue | 9.98e-08 | 3 |
omentum preadipocyte | 2.30e-07 | 3 |
enteric smooth muscle cell | 3.80e-07 | 3 |
smooth muscle cell of large intestine | 3.80e-07 | 3 |
smooth muscle cell of colon | 3.80e-07 | 3 |
receptor cell | 9.65e-07 | 6 |
sensory epithelial cell | 9.65e-07 | 6 |
olfactory epithelial cell | 9.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.00e-13 | 6 |
peritoneum | 2.00e-13 | 6 |
abdominal cavity | 2.00e-13 | 6 |
visceral peritoneum | 2.00e-13 | 6 |
intestine | 9.60e-12 | 17 |
large intestine | 4.42e-11 | 11 |
colon | 1.21e-10 | 9 |
hindgut | 3.44e-09 | 19 |
gastrointestinal system | 1.08e-08 | 25 |
cloaca | 1.93e-08 | 14 |
anal region | 1.93e-08 | 14 |
embryonic cloaca | 1.93e-08 | 14 |
terminal part of digestive tract | 1.93e-08 | 14 |
primitive urogenital sinus | 1.93e-08 | 14 |
proctodeum | 1.93e-08 | 14 |
sex gland | 7.88e-08 | 12 |
male reproductive gland | 7.88e-08 | 12 |
genitourinary system | 8.97e-08 | 15 |
surface structure | 1.99e-07 | 99 |
skin of body | 3.29e-07 | 41 |
reproductive structure | 3.44e-07 | 59 |
reproductive system | 3.44e-07 | 59 |
integument | 4.24e-07 | 46 |
integumental system | 4.24e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.76e-11 | 5 |
myotonic disease | 1.76e-11 | 5 |
muscle tissue disease | 1.76e-11 | 5 |
myopathy | 1.76e-11 | 5 |
muscular disease | 1.76e-11 | 5 |
myotonic dystrophy | 1.76e-11 | 5 |