FFCP PHASE1:Hg19::chr15:78913306..78913349,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1957 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002bea.2,uc002beb.2,uc002bec.2_5end | |||
|coexpression_cluster_id=C1753 | |||
|description=CAGE_peak_1_at_CHRNA3_5end | |||
|id=chr15:78913306..78913349,- | |||
|ontology_enrichment_celltype=CL:0000540!8.94e-07!6;CL:0000031!8.94e-07!6;CL:0000404!8.94e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.66e-09;3!CL:0000147;1.52e-08;14!CL:0002322;2.87e-08;5!CL:0002321;3.08e-08;15!CL:0000123;2.94e-07;2!CL:0000242;2.94e-07;2!CL:0000149;4.62e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.59e-09,3;CL:0000147,1.78e-08,14;CL:0002322,3.38e-08,5;CL:0000242,2.90e-07,2;CL:0000149,4.53e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.85e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.59e-30!86;UBERON:0007284!1.59e-30!86;UBERON:0007023!2.34e-30!115;UBERON:0005743!2.78e-30!86;UBERON:0000073!4.34e-30!94;UBERON:0001016!4.34e-30!94;UBERON:0002346!2.70e-28!90;UBERON:0001017!2.11e-26!82;UBERON:0001049!5.84e-23!57;UBERON:0005068!5.84e-23!57;UBERON:0006241!5.84e-23!57;UBERON:0007135!5.84e-23!57;UBERON:0000955!1.05e-20!69;UBERON:0006238!1.05e-20!69;UBERON:0004121!2.14e-20!169;UBERON:0000924!2.19e-19!173;UBERON:0006601!2.19e-19!173;UBERON:0002616!2.73e-19!59;UBERON:0003056!3.57e-19!61;UBERON:0000153!2.91e-18!129;UBERON:0007811!2.91e-18!129;UBERON:0000033!2.91e-16!123;UBERON:0003080!2.14e-14!42;UBERON:0002780!1.07e-13!41;UBERON:0001890!1.07e-13!41;UBERON:0006240!1.07e-13!41;UBERON:0000064!2.51e-10!219;UBERON:0003076!2.77e-10!15;UBERON:0003057!2.77e-10!15;UBERON:0004733!6.60e-10!12;UBERON:0002028!6.60e-10!12;UBERON:0007277!6.60e-10!12;UBERON:0001894!2.31e-09!7;UBERON:0006222!2.31e-09!7;UBERON:0004732!6.51e-09!13;UBERON:0000062!8.95e-09!511;UBERON:0000922!1.57e-08!612;UBERON:0000481!2.50e-08!347;UBERON:0005409!2.67e-08!35;UBERON:0002020!3.60e-08!34;UBERON:0003528!3.60e-08!34;UBERON:0001893!4.57e-08!34;UBERON:0007625!4.64e-08!11;UBERON:0000063!5.81e-08!97;UBERON:0001869!7.28e-08!32;UBERON:0002791!1.33e-07!33;UBERON:0000966!1.96e-07!5;UBERON:0005388!1.96e-07!5;UBERON:0001802!1.96e-07!5;UBERON:0000468!1.98e-07!659;UBERON:0002680!2.75e-07!9;UBERON:0001895!2.75e-07!9;UBERON:0010092!2.75e-07!9;UBERON:0000970!6.28e-07!20;UBERON:0003135!8.24e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0001894;3.21e-14;7!UBERON:0003296;1.12e-11;4!UBERON:0010133;1.12e-11;4!UBERON:0005409;1.20e-10;22!UBERON:0000369;1.24e-10;4!UBERON:0002435;1.24e-10;4!UBERON:0000204;1.24e-10;4!UBERON:0000970;6.10e-10;20!UBERON:0000922;1.48e-09;49!UBERON:0002104;2.21e-09;21!UBERON:0001781;2.66e-09;3!UBERON:0001782;2.66e-09;3!UBERON:0000160;4.58e-09;17!UBERON:0007625;1.43e-08;11!UBERON:0005383;1.79e-08;3!UBERON:0005382;1.79e-08;3!UBERON:0000020;2.05e-08;23!UBERON:0000019;3.12e-08;19!UBERON:0000047;3.12e-08;19!UBERON:0004088;3.12e-08;19!UBERON:0010230;3.12e-08;19!UBERON:0000073;5.02e-08;53!UBERON:0002616;5.02e-08;53!UBERON:0001032;5.43e-08;24!UBERON:0004456;5.43e-08;24!UBERON:0002784;1.71e-07;4!UBERON:0001905;2.11e-07;2!UBERON:0002757;2.11e-07;2!UBERON:0010134;2.11e-07;2!UBERON:0005408;2.11e-07;2!UBERON:0001899;2.11e-07;2!UBERON:0001456;2.58e-07;21!UBERON:0002370;3.07e-07;2!UBERON:0005058;3.07e-07;2!UBERON:0009113;3.07e-07;2!UBERON:0002420;3.48e-07;9!UBERON:0007245;3.48e-07;9!UBERON:0010009;3.48e-07;9!UBERON:0010011;3.48e-07;9!UBERON:0000454;3.48e-07;9!UBERON:0000125;5.66e-07;9!UBERON:0002308;5.66e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.69e-17,82;UBERON:0007284,3.69e-17,82;UBERON:0002346,4.83e-16,86;UBERON:0010371,1.19e-14,104;UBERON:0001894,2.40e-14,7;UBERON:0006222,2.40e-14,7;UBERON:0003056,2.83e-14,61;UBERON:0001016,3.65e-12,89;UBERON:0000966,4.40e-12,6;UBERON:0005388,4.40e-12,6;UBERON:0001802,4.40e-12,6;UBERON:0000073,6.47e-12,53;UBERON:0002616,6.47e-12,53;UBERON:0003296,7.49e-12,4;UBERON:0010133,7.49e-12,4;UBERON:0001049,4.67e-11,56;UBERON:0005068,4.67e-11,56;UBERON:0006241,4.67e-11,56;UBERON:0007135,4.67e-11,56;UBERON:0000369,1.14e-10,4;UBERON:0002435,1.14e-10,4;UBERON:0000204,1.14e-10,4;UBERON:0010082,1.14e-10,4;UBERON:0004121,1.50e-10,171;UBERON:0000924,1.50e-10,171;UBERON:0006601,1.50e-10,171;UBERON:0000955,1.83e-10,68;UBERON:0006238,1.83e-10,68;UBERON:0001017,4.21e-10,81;UBERON:0011216,1.66e-09,223;UBERON:0000970,1.96e-09,21;UBERON:0002104,1.96e-09,21;UBERON:0001782,2.59e-09,3;UBERON:0005424,2.59e-09,3;UBERON:0005409,3.72e-09,25;UBERON:0000160,4.77e-09,17;UBERON:0010314,5.56e-09,132;UBERON:0007023,8.71e-09,114;UBERON:0007625,1.25e-08,11;UBERON:0005383,1.77e-08,3;UBERON:0005382,1.77e-08,3;UBERON:0002780,4.00e-08,41;UBERON:0001890,4.00e-08,41;UBERON:0003080,4.00e-08,41;UBERON:0006240,4.00e-08,41;UBERON:0000020,4.91e-08,24;UBERON:0001032,4.91e-08,24;UBERON:0004456,4.91e-08,24;UBERON:0000019,8.49e-08,20;UBERON:0000047,8.49e-08,20;UBERON:0010312,8.49e-08,20;UBERON:0004088,8.49e-08,20;UBERON:0010230,8.49e-08,20;UBERON:0003072,8.49e-08,20;UBERON:0004128,8.49e-08,20;UBERON:0003071,8.49e-08,20;UBERON:0002784,1.87e-07,4;UBERON:0001905,2.15e-07,2;UBERON:0002757,2.15e-07,2;UBERON:0010134,2.15e-07,2;UBERON:0005408,2.15e-07,2;UBERON:0001899,2.15e-07,2;UBERON:0002420,3.22e-07,9;UBERON:0007245,3.22e-07,9;UBERON:0010009,3.22e-07,9;UBERON:0010011,3.22e-07,9;UBERON:0000454,3.22e-07,9;UBERON:0001781,4.53e-07,4;UBERON:0000125,5.78e-07,9;UBERON:0002308,5.78e-07,9;UBERON:0001456,5.80e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,0.886917589850256,0.87834785693126,0.327447688744282,0,0,0.649094787309367,1.21890816109487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,1.70763188581434,0.795178609928912,1.16193942869518,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5951143859516,0,3.60292401626904,0,0,0,0.0925884451585296,0,0,0,4.28942498407784,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7208591334964,2.62411716559765,5.20605431462885,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,5.02073134299124,0,0,0,0,10.7424183456105,1.75368900001705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57768678274367,0,0,0,0,0,5.96488588659779,0.422008249231538,0,0,0.211125408127993,0.19924798825107,3.03912307084262,1.25966373927138,0.102268682502155,0,0,0,0,0,0.690503839458535,0,0,0.969332746095218,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,54.5182484090538,4.42870692906919,1.20596438625408,4.5774520895125,3.53853631779919,11.5263571391884,0.87754158861589,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0.432777279484182,10.9478812418636,3.27292988662355,18.3309043480088,0,0,0,0.67401132980677,0,5.3880822516828,0,0,0.728341138602278,0.394584402849391,6.04953580243319,0.91821828489147,0.505492637027904,0.300646838828985,0,1.32930774541437,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0.441280633457501,53.1054740834251,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0.288180834308212,6.41404938529128,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0.410716136675979,0,0,0,6.14421282798959,0.916641696046735,0,0,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,1.76828463311521,1.10031549277787,0.83088067605837,0,0,0.242998226632099,0.335434687599266,0,0.524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,1.19009341568421,0,0,0,0,0,3.96932817449561,0,0,0,0,0,0,0,2.51286554000375,0,0,0,0.573409195690071,2.10765197920019,0.869349641179368,1.10678907948985,0,0,0,0,55.263518885212,21.5932332630129,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,91.0607923682,127.880226316465,0,134.764693528945,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,1.47727217721857,0,0,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,1.09394961803644,0,0,0,0.383287282918786,55.1772890954635,100.885116665647,1.82089681270989,1.59363533945908,0.0887023701626388,0,0,0.339848664884159,0.197318320688547,0,0,0.78493092850514,1.57115589916002,0,60.2684755536267,0,0,77.2661442549655,3.79232668158544,28.5953906405588,0,0,0,0,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,4.40004335877004,0,8.79524133963433,0.754814217833368,2.46957305945423,11.1465375857018,0,0,0.235676547101626,0.196308467114945,0,0.8453114551668,0,0.281951753939561,0.386747327841463,0,0,0,0,4.3820183294791,0,0,0.788857810965923,0.339957450954573,0.872701380680755,5.290268405154,0,0,0,0,0.655593431782173,0,1.01988829741982,0.534434810531121,0.735159196278759,5.26485832513988,0.682008283964155,0.535928260312357,4.1458471972939,0.930896962757057,0.213233981900981,2.85677317756488,38.4949902622596,32.340926148142,0,0.25458863311266,0,0,0.342233301085281,0.134704106029175,0.502055437748735,1.33064142618405,0.0814032686109745,0,0,0,4.69281884806909,0.366724332548599,2.03448089157869,0.665756774185513,4.6292972525936,0 | |||
|short_description=p1@CHRNA3 | |||
}} |
Revision as of 00:44, 12 January 2014
Short description: | p1@CHRNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHRNA3_5end |
Coexpression cluster: | C1753_neuroblastoma_pineal_rectum_retina_merkel_carcinosarcoma_eye |
Association with transcript: | 0bp_to_uc002bea.2, uc002beb.2, uc002bec.2_5end |
EntrezGene: | CHRNA3 |
HGNC: | 1957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.59e-09 | 3 |
pigment cell | 1.78e-08 | 14 |
embryonic stem cell | 3.38e-08 | 5 |
Merkel cell | 2.90e-07 | 2 |
visual pigment cell | 4.53e-07 | 4 |