Personal tools

UBERON:0003296

From FANTOM5_SSTAR

Jump to: navigation, search

Name:gland of diencephalon
Namespace:FANTOM
Definition:"A gland that is part of a diencephalon [Obol]." [OBOL:automatic]
Xrefs:
links:

EHDAA2:0000395
EHDAA:4475
EMAPA:16646
EMAPA:16897

VHOG:0000653
Synonyms: "between brain gland" EXACT [OBOL:automatic]
"diencephalon gland" EXACT [OBOL:automatic]
"gland of between brain" EXACT [OBOL:automatic]
"gland of interbrain" EXACT [OBOL:automatic]
"gland of mature diencephalon" EXACT [OBOL:automatic]
"interbrain gland" EXACT [OBOL:automatic]
"mature diencephalon gland" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002530(gland),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0001894(diencephalon)



Children

is a:UBERON:0000007 (pituitary gland),UBERON:0001905 (pineal body)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003296 (gland of diencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.57e-195FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
2.57e-195FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_041e7e095e0433a5f5e2a2f6abfd85afp@chr19:7979708..7979734, +
1.0e-156FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.0e-156FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_a1bc2e9d68446f0c07516434f3605aeep11@SPOCK1
1.5e-156FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
1.5e-156FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_b3480ceef493666046a1c06662b262cep@chr12:128210626..128210641, -
6.94e-147FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
6.94e-147FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_3c7fe58ee68581c87674381e7310afbep1@LHB
6.94e-147FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
6.94e-147FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979677..7979703, +
6.94e-147FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_3c7fe58ee68581c87674381e7310afbep@chr19:49519930..49519937, -
6.94e-147FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_3c7fe58ee68581c87674381e7310afbep@chr19:7979644..7979653, +
2.79e-131FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
2.79e-131FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_162ecb6a52ab7532e623acb216eb7a11p@chr1:99693441..99693485, -
1.07e-130FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.07e-130FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_19e6ecc5ca8f9d9c1a5a6040e217ff51p5@ENST00000513329
1.0e-112FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.0e-112FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_daffbf8b60612fd06df6d1c34b4f6cf5p3@ENST00000443800
1.76e-111FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
1.76e-111FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_547c296569933891330becae011cbbcap2@LHX3
8.91e-111FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
8.91e-111FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_5ace75054bf71479d5a1fef30ffee88bp@chr22:47126639..47126654, +
2.76e-110FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_0d9c0c5f5240b6aabfe6064862f91b93p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_0d9c0c5f5240b6aabfe6064862f91b93p17@LRRC49
2.76e-110FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_0d9c0c5f5240b6aabfe6064862f91b93p@chr11:75194071..75194110, -
5.02e-99FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
5.02e-99FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_e10f7ee5f323a23152e5a369cbcc8d74p@chr12:128210666..128210685, -
1.38e-98FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.38e-98FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_09220a7a11d2f7f5871951de837e5d88p@chr9:139095116..139095139, +
1.55e-98FFCP PHASE1:Hg19::chr8:135515989..135515991,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:135515989..135515991, +
1.55e-98FFCP PHASE2:Hg19::chr17:61995480..61995499,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995480..61995499, -
1.55e-98FFCP PHASE1:Hg19::chr8:126582844..126582849,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:126582844..126582849, -
1.55e-98FFCP PHASE1:Hg19::chr6:22287815..22287820,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287815..22287820, -
1.55e-98FFCP PHASE2:Hg19::chr8:135504405..135504410,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135504405..135504410, -
1.55e-98FFCP PHASE1:Hg19::chr2:17141934..17141935,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17141934..17141935, +
1.55e-98FFCP PHASE2:Hg19::chr16:50898038..50898042,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:50898038..50898042, -
1.55e-98FFCP PHASE1:Hg19::chr17:61996160..61996176,-#_86c8842de92bb34e78ab840208c7dc62p3@GH1
1.55e-98FFCP PHASE2:Hg19::chr7:129084265..129084288,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:129084265..129084288, -
1.55e-98FFCP PHASE1:Hg19::chr7:120842768..120842790,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:120842768..120842790, -
1.55e-98FFCP PHASE2:Hg19::chr16:51808960..51808964,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:51808960..51808964, -
1.55e-98FFCP PHASE2:Hg19::chr13:68306577..68306607,+#_86c8842de92bb34e78ab840208c7dc62p@chr13:68306577..68306607, +
1.55e-98FFCP PHASE1:Hg19::chr7:31003593..31003614,+#_86c8842de92bb34e78ab840208c7dc62p2@GHRHR
1.55e-98FFCP PHASE2:Hg19::chr1:45782001..45782009,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:45782001..45782009, +
1.55e-98FFCP PHASE1:Hg19::chr2:25391815..25391821,-#_86c8842de92bb34e78ab840208c7dc62p13@POMC
1.55e-98FFCP PHASE2:Hg19::chr17:61994613..61994649,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61994613..61994649, -
1.55e-98FFCP PHASE2:Hg19::chr6:158734173..158734183,+#_86c8842de92bb34e78ab840208c7dc62p7@TULP4
1.55e-98FFCP PHASE1:Hg19::chr6:22287647..22287662,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22287647..22287662, -
1.55e-98FFCP PHASE2:Hg19::chr8:1066886..1066919,+#_86c8842de92bb34e78ab840208c7dc62p@chr8:1066886..1066919, +
1.55e-98FFCP PHASE1:Hg19::chr3:192894664..192894677,-#_86c8842de92bb34e78ab840208c7dc62p1@ENST00000414895
1.55e-98FFCP PHASE2:Hg19::chr1:57907030..57907050,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:57907030..57907050, +
1.55e-98FFCP PHASE1:Hg19::chr2:17065916..17065929,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17065916..17065929, +
1.55e-98FFCP PHASE1:Hg19::chr17:61995432..61995458,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995432..61995458, -
1.55e-98FFCP PHASE2:Hg19::chr8:87751931..87751947,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:87751931..87751947, -
1.55e-98FFCP PHASE2:Hg19::chr17:55484129..55484139,+#_86c8842de92bb34e78ab840208c7dc62p@chr17:55484129..55484139, +
1.55e-98FFCP PHASE2:Hg19::chr11:18040537..18040547,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18040537..18040547, -
1.55e-98FFCP PHASE1:Hg19::chr5:119799539..119799543,+#_86c8842de92bb34e78ab840208c7dc62p13@PRR16
1.55e-98FFCP PHASE2:Hg19::chr9:37668094..37668097,+#_86c8842de92bb34e78ab840208c7dc62p6@FRMPD1
1.55e-98FFCP PHASE1:Hg19::chr3:128170725..128170735,+#_86c8842de92bb34e78ab840208c7dc62p@chr3:128170725..128170735, +
1.55e-98FFCP PHASE1:Hg19::chr16:18036005..18036011,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:18036005..18036011, -
1.55e-98FFCP PHASE2:Hg19::chr6:22294730..22294743,-#_86c8842de92bb34e78ab840208c7dc62p6@PRL
1.55e-98FFCP PHASE2:Hg19::chr3:192894664..192894677,-#_86c8842de92bb34e78ab840208c7dc62p1@ENST00000414895
1.55e-98FFCP PHASE1:Hg19::chr1:99860753..99860764,-#_86c8842de92bb34e78ab840208c7dc62p@chr1:99860753..99860764, -
1.55e-98FFCP PHASE2:Hg19::chr12:49621658..49621666,+#_86c8842de92bb34e78ab840208c7dc62p21@TUBA1C
1.55e-98FFCP PHASE1:Hg19::chr3:54952432..54952459,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952432..54952459, -
1.55e-98FFCP PHASE2:Hg19::chr1:13820103..13820109,+#_86c8842de92bb34e78ab840208c7dc62p@chr1:13820103..13820109, +
1.55e-98FFCP PHASE2:Hg19::chr7:9782665..9782674,+#_86c8842de92bb34e78ab840208c7dc62p@chr7:9782665..9782674, +
1.55e-98FFCP PHASE1:Hg19::chr2:44903714..44903719,+#_86c8842de92bb34e78ab840208c7dc62p8@CAMKMT
1.55e-98FFCP PHASE2:Hg19::chr12:56582028..56582062,+#_86c8842de92bb34e78ab840208c7dc62p@chr12:56582028..56582062, +
1.55e-98FFCP PHASE1:Hg19::chr3:100942645..100942655,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:100942645..100942655, -
1.55e-98FFCP PHASE1:Hg19::chr11:18053180..18053192,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:18053180..18053192, -
1.55e-98FFCP PHASE2:Hg19::chr3:54952432..54952459,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:54952432..54952459, -
1.55e-98FFCP PHASE1:Hg19::chr8:135522475..135522486,-#_86c8842de92bb34e78ab840208c7dc62p16@ZFAT
1.55e-98FFCP PHASE2:Hg19::chr3:118521917..118521922,-#_86c8842de92bb34e78ab840208c7dc62p@chr3:118521917..118521922, -
1.55e-98FFCP PHASE2:Hg19::chr17:61995995..61996002,-#_86c8842de92bb34e78ab840208c7dc62p3@AB591020
1.55e-98FFCP PHASE1:Hg19::chr6:22290499..22290506,+#_86c8842de92bb34e78ab840208c7dc62p@chr6:22290499..22290506, +
1.55e-98FFCP PHASE1:Hg19::chr18:56962131..56962138,-#_86c8842de92bb34e78ab840208c7dc62p@chr18:56962131..56962138, -
1.55e-98FFCP PHASE2:Hg19::chr11:72297717..72297725,-#_86c8842de92bb34e78ab840208c7dc62p@chr11:72297717..72297725, -
1.55e-98FFCP PHASE1:Hg19::chr5:136328601..136328607,-#_86c8842de92bb34e78ab840208c7dc62p25@SPOCK1
1.55e-98FFCP PHASE2:Hg19::chr3:130248877..130248886,+#_86c8842de92bb34e78ab840208c7dc62p@chr3:130248877..130248886, +
1.55e-98FFCP PHASE2:Hg19::chr10:123959529..123959547,+#_86c8842de92bb34e78ab840208c7dc62p@chr10:123959529..123959547, +
1.55e-98FFCP PHASE2:Hg19::chr8:135520309..135520324,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135520309..135520324, -
1.55e-98FFCP PHASE2:Hg19::chr1:168250194..168250197,+#_86c8842de92bb34e78ab840208c7dc62p3@TBX19
1.55e-98FFCP PHASE2:Hg19::chr7:32468385..32468392,-#_86c8842de92bb34e78ab840208c7dc62p@chr7:32468385..32468392, -
1.55e-98FFCP PHASE2:Hg19::chr2:108616342..108616384,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:108616342..108616384, +
1.55e-98FFCP PHASE2:Hg19::chr9:135964996..135965001,+#_86c8842de92bb34e78ab840208c7dc62p@chr9:135964996..135965001, +
1.55e-98FFCP PHASE2:Hg19::chr6:22290447..22290450,-#_86c8842de92bb34e78ab840208c7dc62p@chr6:22290447..22290450, -
1.55e-98FFCP PHASE2:Hg19::chr16:18066392..18066397,-#_86c8842de92bb34e78ab840208c7dc62p@chr16:18066392..18066397, -
1.55e-98FFCP PHASE2:Hg19::chr5:135732714..135732721,-#_86c8842de92bb34e78ab840208c7dc62p2@ENST00000514282
1.55e-98FFCP PHASE1:Hg19::chr13:52650541..52650548,-#_86c8842de92bb34e78ab840208c7dc62p@chr13:52650541..52650548, -
1.55e-98FFCP PHASE2:Hg19::chr17:74463608..74463612,+#_86c8842de92bb34e78ab840208c7dc62p5@AANAT
1.55e-98FFCP PHASE1:Hg19::chr8:135504353..135504365,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135504353..135504365, -
1.55e-98FFCP PHASE2:Hg19::chr2:17075761..17075773,+#_86c8842de92bb34e78ab840208c7dc62p@chr2:17075761..17075773, +
1.55e-98FFCP PHASE1:Hg19::chr17:55484129..55484139,+#_86c8842de92bb34e78ab840208c7dc62p@chr17:55484129..55484139, +
1.55e-98FFCP PHASE2:Hg19::chr8:135472861..135472868,-#_86c8842de92bb34e78ab840208c7dc62p@chr8:135472861..135472868, -
1.55e-98FFCP PHASE2:Hg19::chr17:61995220..61995244,-#_86c8842de92bb34e78ab840208c7dc62p@chr17:61995220..61995244, -