FFCP PHASE1:Hg19::chr11:57417405..57417423,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18328 | |||
|TSSclassifier=strong | |||
|UniProt=Q96NS1 | |||
|association_with_transcript=0bp_to_ENST00000300022,ENST00000524669,ENST00000529776,ENST00000531442,ENST00000533025,NM_145008,uc001nkv.3,uc009ymk.2_5end | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_2_at_YPEL4_5end | |||
|id=chr11:57417405..57417423,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.45e-08;2!CL:0000558;4.45e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.75e-08,2;CL:0000765,3.75e-08,2;CL:0000050,3.75e-08,2;CL:0000038,3.75e-08,2;CL:0000558,3.75e-08,2;CL:0000547,3.75e-08,2;CL:0000549,3.75e-08,2;CL:0000550,3.75e-08,2;CL:0000552,3.75e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.66e-22;82!UBERON:0006215;1.78e-11;3!UBERON:0010122;9.42e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.00e-48!57;UBERON:0005068!4.00e-48!57;UBERON:0006241!4.00e-48!57;UBERON:0007135!4.00e-48!57;UBERON:0007023!8.37e-44!115;UBERON:0002616!8.84e-40!59;UBERON:0002780!1.20e-38!41;UBERON:0001890!1.20e-38!41;UBERON:0006240!1.20e-38!41;UBERON:0000955!1.04e-37!69;UBERON:0006238!1.04e-37!69;UBERON:0001017!1.29e-37!82;UBERON:0003080!2.34e-37!42;UBERON:0000073!9.25e-37!94;UBERON:0001016!9.25e-37!94;UBERON:0005743!3.19e-36!86;UBERON:0002020!1.21e-30!34;UBERON:0003528!1.21e-30!34;UBERON:0001893!1.27e-30!34;UBERON:0003075!3.63e-30!86;UBERON:0007284!3.63e-30!86;UBERON:0002791!1.42e-29!33;UBERON:0001869!1.32e-28!32;UBERON:0002346!6.85e-28!90;UBERON:0002619!1.08e-23!22;UBERON:0003056!2.71e-22!61;UBERON:0000956!1.83e-21!25;UBERON:0000203!1.83e-21!25;UBERON:0001950!2.28e-21!20;UBERON:0004121!6.79e-18!169;UBERON:0000033!2.51e-17!123;UBERON:0000153!4.20e-17!129;UBERON:0007811!4.20e-17!129;UBERON:0000924!6.17e-17!173;UBERON:0006601!6.17e-17!173;UBERON:0000025!2.36e-13!194;UBERON:0003076!1.28e-11!15;UBERON:0003057!1.28e-11!15;UBERON:0002420!6.60e-11!9;UBERON:0007245!6.60e-11!9;UBERON:0010009!6.60e-11!9;UBERON:0010011!6.60e-11!9;UBERON:0000454!6.60e-11!9;UBERON:0004111!7.57e-11!241;UBERON:0002308!1.11e-10!9;UBERON:0000125!1.11e-10!9;UBERON:0004732!4.70e-10!13;UBERON:0001894!1.80e-09!7;UBERON:0006222!1.80e-09!7;UBERON:0004733!4.93e-09!12;UBERON:0002028!4.93e-09!12;UBERON:0007277!4.93e-09!12;UBERON:0009663!1.15e-08!7;UBERON:0000477!1.81e-08!286;UBERON:0000200!3.62e-08!6;UBERON:0001871!1.32e-07!7;UBERON:0002298!2.17e-07!8;UBERON:0000349!3.70e-07!5;UBERON:0002021!4.76e-07!5;UBERON:0001872!6.26e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.08e-63;53!UBERON:0002616;2.08e-63;53!UBERON:0002780;8.55e-63;41!UBERON:0001890;8.55e-63;41!UBERON:0001893;4.41e-62;34!UBERON:0003528;2.07e-61;34!UBERON:0002020;2.07e-61;34!UBERON:0002619;3.85e-60;22!UBERON:0001869;8.14e-60;32!UBERON:0002791;1.09e-59;32!UBERON:0001950;1.21e-53;20!UBERON:0000956;1.56e-52;25!UBERON:0000203;1.56e-52;25!UBERON:0000955;6.15e-38;68!UBERON:0001017;1.15e-33;75!UBERON:0001016;1.12e-30;83!UBERON:0004732;1.13e-23;13!UBERON:0002420;3.10e-22;9!UBERON:0007245;3.10e-22;9!UBERON:0010009;3.10e-22;9!UBERON:0010011;3.10e-22;9!UBERON:0000454;3.10e-22;9!UBERON:0000125;9.86e-22;9!UBERON:0002308;9.86e-22;9!UBERON:0004733;6.58e-21;12!UBERON:0002028;6.58e-21;12!UBERON:0000200;5.10e-20;6!UBERON:0002298;9.62e-19;6!UBERON:0007023;1.61e-18;114!UBERON:0001894;6.35e-18;7!UBERON:0000349;4.91e-17;5!UBERON:0002021;6.30e-17;5!UBERON:0001872;1.26e-16;5!UBERON:0009663;3.39e-16;7!UBERON:0003296;5.08e-15;4!UBERON:0010133;5.08e-15;4!UBERON:0002784;1.75e-14;4!UBERON:0000369;2.17e-13;4!UBERON:0002435;2.17e-13;4!UBERON:0000204;2.17e-13;4!UBERON:0002680;4.21e-13;9!UBERON:0001895;4.21e-13;9!UBERON:0001871;2.90e-12;6!UBERON:0011216;5.40e-11;132!UBERON:0001870;6.72e-11;3!UBERON:0005383;1.04e-10;3!UBERON:0005382;1.04e-10;3!UBERON:0000988;2.82e-10;3!UBERON:0001896;3.48e-10;3!UBERON:0005290;3.48e-10;3!UBERON:0010314;6.60e-09;132!UBERON:0001905;1.92e-08;2!UBERON:0002757;1.92e-08;2!UBERON:0010134;1.92e-08;2!UBERON:0005408;1.92e-08;2!UBERON:0001899;1.92e-08;2!UBERON:0000007;2.83e-08;2!UBERON:0002771;3.62e-08;2!UBERON:0001954;3.68e-08;2!UBERON:0003022;3.68e-08;2!UBERON:0002421;3.68e-08;2!UBERON:0002600;3.68e-08;2!UBERON:0002702;6.06e-08;2!UBERON:0001876;6.71e-08;2!UBERON:0001873;9.42e-08;2!UBERON:0001897;9.74e-08;2!UBERON:0010225;9.74e-08;2!UBERON:0002148;2.58e-07;2!UBERON:0005162;2.58e-07;2!UBERON:0000122;2.58e-07;2!UBERON:0006331;2.58e-07;2!UBERON:0009662;2.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.82e-111,53;UBERON:0002616,2.82e-111,53;UBERON:0001049,7.19e-110,56;UBERON:0005068,7.19e-110,56;UBERON:0006241,7.19e-110,56;UBERON:0007135,7.19e-110,56;UBERON:0000955,9.34e-92,68;UBERON:0006238,9.34e-92,68;UBERON:0002780,1.87e-90,41;UBERON:0001890,1.87e-90,41;UBERON:0003080,1.87e-90,41;UBERON:0006240,1.87e-90,41;UBERON:0001017,8.73e-83,81;UBERON:0001016,4.93e-77,89;UBERON:0003075,1.39e-75,82;UBERON:0007284,1.39e-75,82;UBERON:0003528,2.55e-73,34;UBERON:0002020,2.55e-73,34;UBERON:0001893,2.93e-73,34;UBERON:0002346,1.35e-71,86;UBERON:0001869,1.17e-67,32;UBERON:0002791,1.38e-67,32;UBERON:0007023,5.05e-63,114;UBERON:0003056,5.79e-62,61;UBERON:0002619,5.63e-60,22;UBERON:0010371,2.11e-57,104;UBERON:0001950,1.84e-53,20;UBERON:0000956,2.17e-52,25;UBERON:0000203,2.17e-52,25;UBERON:0010314,3.16e-45,132;UBERON:0004121,2.83e-35,171;UBERON:0000924,2.83e-35,171;UBERON:0006601,2.83e-35,171;UBERON:0011216,1.18e-32,223;UBERON:0000025,6.62e-29,192;UBERON:0004732,9.42e-24,13;UBERON:0002420,1.80e-22,9;UBERON:0007245,1.80e-22,9;UBERON:0010009,1.80e-22,9;UBERON:0010011,1.80e-22,9;UBERON:0000454,1.80e-22,9;UBERON:0004111,4.82e-22,240;UBERON:0000125,6.56e-22,9;UBERON:0002308,6.56e-22,9;UBERON:0004733,6.14e-21,12;UBERON:0002028,6.14e-21,12;UBERON:0007277,6.14e-21,12;UBERON:0003076,3.41e-20,15;UBERON:0003057,3.41e-20,15;UBERON:0000200,5.38e-20,6;UBERON:0002298,9.50e-19,6;UBERON:0001894,4.91e-18,7;UBERON:0006222,4.91e-18,7;UBERON:0000349,3.47e-17,5;UBERON:0002021,6.99e-17,5;UBERON:0001872,1.49e-16,5;UBERON:0009663,2.38e-16,7;UBERON:0003296,4.92e-15,4;UBERON:0010133,4.92e-15,4;UBERON:0000483,6.82e-15,306;UBERON:0000119,1.22e-14,309;UBERON:0002784,1.34e-14,4;UBERON:0000369,1.65e-13,4;UBERON:0002435,1.65e-13,4;UBERON:0000204,1.65e-13,4;UBERON:0010082,1.65e-13,4;UBERON:0002680,4.26e-13,9;UBERON:0001895,4.26e-13,9;UBERON:0010092,4.26e-13,9;UBERON:0001871,2.67e-12,6;UBERON:0001870,8.09e-11,3;UBERON:0005383,8.65e-11,3;UBERON:0005382,8.65e-11,3;UBERON:0000988,3.11e-10,3;UBERON:0001896,3.11e-10,3;UBERON:0005290,3.11e-10,3;UBERON:0010096,3.11e-10,3;UBERON:0001905,1.93e-08,2;UBERON:0002757,1.93e-08,2;UBERON:0010134,1.93e-08,2;UBERON:0005408,1.93e-08,2;UBERON:0001899,1.93e-08,2;UBERON:0000007,2.74e-08,2;UBERON:0001954,3.50e-08,2;UBERON:0003022,3.50e-08,2;UBERON:0002421,3.50e-08,2;UBERON:0002600,3.50e-08,2;UBERON:0002771,3.75e-08,2;UBERON:0001876,5.48e-08,2;UBERON:0002702,5.86e-08,2;UBERON:0001897,7.44e-08,2;UBERON:0010225,7.44e-08,2;UBERON:0001873,8.81e-08,2;UBERON:0010122,8.81e-08,2;UBERON:0005162,2.09e-07,2;UBERON:0000122,2.09e-07,2;UBERON:0002148,2.46e-07,2;UBERON:0006331,2.46e-07,2;UBERON:0009662,2.46e-07,2;UBERON:0000923,7.79e-07,560;UBERON:0010316,7.79e-07,560;UBERON:0005291,7.79e-07,560;UBERON:0006598,7.79e-07,560;UBERON:0010317,7.79e-07,560;UBERON:0002532,7.79e-07,560 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.436194716338694,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0.654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0,0,0.504867548488229,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.837581326671744,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,5.48149691614836,3.92153176537351,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.296964680832639,0,2.98244294329889,5.34543782359948,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,3.24688343566479,1.99613798001194,0,0,0,0,0,0,0,0,0,2.65722415744152,3.85908603601305,15.2581736317083,15.5916756503027,2.65992857058193,1.53569778007781,0,0,0.615602068030377,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0.167821586975843,0,0.635746315921515,0,0,0,0,0,0.265372693510018,0,0,0,0,1.61762719153625,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0.264768380074501,0.677942222341597,0,0,2.089256266544,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,2.19048606227189,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,7.15706720828373,3.26888174667781,0,0,0,0.449947783103001,0,2.12623448303086,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,2.97350799631566,1.3223260174269,0.171086837884329,0,0,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,2.65820453990096,4.14889300666675,6.00916467391199,1.72022758707021,3.21694249456872,1.42821726765182,0.138348634936231,0,0,0.285465333544967,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,5.3920790099175,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,2.48830904013189,0.127894371303652,0.215649622793364,0,0.327628914576042,0,0,0,0,0,0.157723490002507,1.60114149657094,0,0,1.66995985250795,4.25089728976755,4.46974805360024,4.1023272848151,1.00828678488687,2.97376185596137,3.06803726700517,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.327543835020193,0,2.09366512317023,3.90539049306924,7.02735108104026,3.17079050969534,1.09394961803644,0,0,0,0,12.8568440610789,7.0619581665953,6.06965604236632,5.46389259243114,0.0887023701626388,0.115233987555779,0.171488009437418,2.10706172228178,1.71009211263408,0,0,0.313972371402056,2.67096502857203,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.671132590786754,0,0,0.647428837187895,0.102662806856247,0,0,0.233939463462106,1.98950775161368,0,0,0.439762066981716,0.603851374266694,0,0,0,0.245148321753905,0.471353094203252,0.981542335574726,2.0793248022896,0.4226557275834,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,1.86341458096887,0,2.37970215668201,0.872701380680755,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,8.29169439458779,1.96522692137601,0.426467963801962,0,0,0.186224142887574,0,0.0636471582781649,0,0,0.342233301085281,0,0.286888821570705,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,1.22241444182866,0.406896178315738,1.33151354837103,0,0 | |||
|short_description=p2@YPEL4 | |||
}} |
Revision as of 07:46, 11 January 2014
Short description: | p2@YPEL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YPEL4_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | 0bp_to_ENST00000300022, ENST00000524669, ENST00000529776, ENST00000531442, ENST00000533025, NM_145008, uc001nkv.3, uc009ymk.2_5end |
EntrezGene: | YPEL4 |
HGNC: | 18328 |
UniProt: | Q96NS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.75e-08 | 2 |
erythroblast | 3.75e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 3.75e-08 | 2 |
erythroid progenitor cell | 3.75e-08 | 2 |
reticulocyte | 3.75e-08 | 2 |
proerythroblast | 3.75e-08 | 2 |
basophilic erythroblast | 3.75e-08 | 2 |
polychromatophilic erythroblast | 3.75e-08 | 2 |
orthochromatic erythroblast | 3.75e-08 | 2 |