CL:0000552

Name:	orthochromatic erythroblast
Namespace:	FANTOM
Definition:	"The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated." [ISBN:0721601464]
Xrefs:	Expandlinks: FMA:84646
Synonyms:	"acidophilic erythroblast" EXACT [ISBN:0721601464] "eosinophilic erythroblast" EXACT [ISBN:0721601464] "late erythoblast" EXACT [] "orthochromatic normoblast" EXACT [ISBN:0721601464] "pyknotic eto enrythroblast" EXACT [ISBN:0721601464]

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000765(erythroblast)
develops_from:	CL:0000550(polychromatophilic erythroblast)

Children

develops from:	CL:0000558 (reticulocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000552 (orthochromatic erythroblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
3.29e-195	FFCP PHASE2:Hg19::chr11:5255612..5255613,-	p10@HBD
3.29e-195	FFCP PHASE1:Hg19::chr16:67228546..67228549,+	p@chr16:67228546..67228549, +
3.29e-195	FFCP PHASE1:Hg19::chr8:138915590..138915591,+	p@chr8:138915590..138915591, +
3.29e-195	FFCP PHASE1:Hg19::chr21:27203678..27203684,+	p@chr21:27203678..27203684, +
3.29e-195	FFCP PHASE1:Hg19::chr2:87816262..87816269,+	p@chr2:87816262..87816269, +
3.29e-195	FFCP PHASE1:Hg19::chr11:5247730..5247736,-	p@chr11:5247730..5247736, -
3.29e-195	FFCP PHASE2:Hg19::chr11:66676050..66676060,+	p@chr11:66676050..66676060, +
3.29e-195	FFCP PHASE1:Hg19::chr22:30680245..30680254,-	p@chr22:30680245..30680254, -
3.29e-195	FFCP PHASE2:Hg19::chr4:26378984..26378987,+	p@chr4:26378984..26378987, +
3.29e-195	FFCP PHASE2:Hg19::chr3:49726589..49726592,+	p7@RNF123
3.29e-195	FFCP PHASE1:Hg19::chr11:57415965..57415973,+	p5@CLP1
3.29e-195	FFCP PHASE2:Hg19::chr13:78682773..78682778,+	p@chr13:78682773..78682778, +
3.29e-195	FFCP PHASE2:Hg19::chr11:57415965..57415973,+	p5@CLP1
3.29e-195	FFCP PHASE2:Hg19::chr2:112191654..112191660,-	p@chr2:112191654..112191660, -
3.29e-195	FFCP PHASE2:Hg19::chr11:29581179..29581180,+	p@chr11:29581179..29581180, +
3.29e-195	FFCP PHASE1:Hg19::chr20:24432163..24432165,+	p@chr20:24432163..24432165, +
3.29e-195	FFCP PHASE1:Hg19::chr8:63838198..63838201,+	p@chr8:63838198..63838201, +
3.29e-195	FFCP PHASE2:Hg19::chr14:55799575..55799582,+	p@chr14:55799575..55799582, +
3.29e-195	FFCP PHASE2:Hg19::chr1:25598961..25598966,+	p5@RHD
3.29e-195	FFCP PHASE2:Hg19::chr16:227522..227524,+	p@chr16:227522..227524, +
3.29e-195	FFCP PHASE2:Hg19::chr4:160049078..160049079,+	p@chr4:160049078..160049079, +
3.29e-195	FFCP PHASE1:Hg19::chr13:78682773..78682778,+	p@chr13:78682773..78682778, +
3.29e-195	FFCP PHASE2:Hg19::chr8:101412217..101412218,+	p@chr8:101412217..101412218, +
3.29e-195	FFCP PHASE1:Hg19::chr1:95582484..95582492,+	p10@TMEM56
3.29e-195	FFCP PHASE1:Hg19::chr1:25598993..25599007,+	p1@RHD
3.29e-195	FFCP PHASE2:Hg19::chr11:5248435..5248444,+	p@chr11:5248435..5248444, +
3.29e-195	FFCP PHASE1:Hg19::chr19:1207927..1207939,-	p@chr19:1207927..1207939, -
3.29e-195	FFCP PHASE2:Hg19::chr6:50700492..50700495,+	p@chr6:50700492..50700495, +
3.29e-195	FFCP PHASE1:Hg19::chr1:220146675..220146678,-	p@chr1:220146675..220146678, -
3.29e-195	FFCP PHASE2:Hg19::chr9:45465498..45465501,+	p@chr9:45465498..45465501, +
3.29e-195	FFCP PHASE1:Hg19::chr16:227522..227524,+	p@chr16:227522..227524, +
3.29e-195	FFCP PHASE2:Hg19::chr11:5247730..5247736,-	p@chr11:5247730..5247736, -
3.29e-195	FFCP PHASE1:Hg19::chr6:155472342..155472346,-	p@chr6:155472342..155472346, -
3.29e-195	FFCP PHASE1:Hg19::chr1:5543682..5543685,+	p@chr1:5543682..5543685, +
3.29e-195	FFCP PHASE1:Hg19::chr7:23205190..23205198,+	p10@KLHL7
3.29e-195	FFCP PHASE2:Hg19::chrX:107332036..107332041,+	p@chrX:107332036..107332041, +
3.29e-195	FFCP PHASE1:Hg19::chr4:82805715..82805717,+	p@chr4:82805715..82805717, +
3.29e-195	FFCP PHASE2:Hg19::chr3:49726593..49726603,+	p4@RNF123
3.29e-195	FFCP PHASE2:Hg19::chr1:207823590..207823599,+	p@chr1:207823590..207823599, +
3.29e-195	FFCP PHASE1:Hg19::chr10:94679592..94679594,-	p@chr10:94679592..94679594, -
3.29e-195	FFCP PHASE1:Hg19::chr14:55799575..55799582,+	p@chr14:55799575..55799582, +
3.29e-195	FFCP PHASE1:Hg19::chr4:175593804..175593809,+	p@chr4:175593804..175593809, +
3.29e-195	FFCP PHASE1:Hg19::chr6:10585661..10585670,+	p26@GCNT2
3.29e-195	FFCP PHASE2:Hg19::chr20:24432163..24432165,+	p@chr20:24432163..24432165, +
3.29e-195	FFCP PHASE2:Hg19::chr1:25598971..25598977,+	p4@RHD
3.29e-195	FFCP PHASE2:Hg19::chr1:2250692..2250695,+	p@chr1:2250692..2250695, +
3.29e-195	FFCP PHASE2:Hg19::chr18:11740276..11740278,+	p@chr18:11740276..11740278, +
3.29e-195	FFCP PHASE2:Hg19::chr13:23969126..23969130,+	p@chr13:23969126..23969130, +
3.29e-195	FFCP PHASE1:Hg19::chr1:25599018..25599028,+	p3@RHD
3.29e-195	FFCP PHASE1:Hg19::chr2:71833597..71833600,+	p@chr2:71833597..71833600, +
3.29e-195	FFCP PHASE2:Hg19::chr2:62801311..62801318,+	p@chr2:62801311..62801318, +
3.29e-195	FFCP PHASE1:Hg19::chr4:190941380..190941381,+	p@chr4:190941380..190941381, +
3.29e-195	FFCP PHASE1:Hg19::chr3:49726561..49726577,+	p3@RNF123
3.29e-195	FFCP PHASE1:Hg19::chr19:19535964..19535966,+	p@chr19:19535964..19535966, +
3.29e-195	FFCP PHASE1:Hg19::chr13:23969126..23969130,+	p@chr13:23969126..23969130, +
3.29e-195	FFCP PHASE2:Hg19::chr8:138915590..138915591,+	p@chr8:138915590..138915591, +
3.29e-195	FFCP PHASE2:Hg19::chr21:27203678..27203684,+	p@chr21:27203678..27203684, +
3.29e-195	FFCP PHASE1:Hg19::chr7:23205201..23205207,+	p13@KLHL7
3.29e-195	FFCP PHASE2:Hg19::chr2:87816262..87816269,+	p@chr2:87816262..87816269, +
3.29e-195	FFCP PHASE2:Hg19::chr22:30680245..30680254,-	p@chr22:30680245..30680254, -
3.29e-195	FFCP PHASE2:Hg19::chr10:94679592..94679594,-	p@chr10:94679592..94679594, -
3.29e-195	FFCP PHASE2:Hg19::chr17:27188395..27188398,-	p1@MIR451A
3.29e-195	FFCP PHASE1:Hg19::chr1:158580993..158580998,-	p@chr1:158580993..158580998, -
3.29e-195	FFCP PHASE2:Hg19::chr7:23205190..23205198,+	p10@KLHL7
3.29e-195	FFCP PHASE1:Hg19::chr11:115492263..115492265,+	p@chr11:115492263..115492265, +
3.29e-195	FFCP PHASE2:Hg19::chr13:106256314..106256318,+	p@chr13:106256314..106256318, +
3.29e-195	FFCP PHASE1:Hg19::chr11:57416011..57416016,+	p9@CLP1
3.29e-195	FFCP PHASE2:Hg19::chr11:57416011..57416016,+	p9@CLP1
3.29e-195	FFCP PHASE2:Hg19::chr8:63838198..63838201,+	p@chr8:63838198..63838201, +
3.29e-195	FFCP PHASE1:Hg19::chr18:11740276..11740278,+	p@chr18:11740276..11740278, +
3.29e-195	FFCP PHASE1:Hg19::chr9:138852021..138852030,+	p@chr9:138852021..138852030, +
3.29e-195	FFCP PHASE1:Hg19::chr13:106256314..106256318,+	p@chr13:106256314..106256318, +
3.29e-195	FFCP PHASE1:Hg19::chr12:131245491..131245492,+	p@chr12:131245491..131245492, +
3.29e-195	FFCP PHASE1:Hg19::chr6:10585672..10585677,+	p42@GCNT2
3.29e-195	FFCP PHASE2:Hg19::chr6:10585661..10585670,+	p26@GCNT2
3.29e-195	FFCP PHASE2:Hg19::chr1:25598993..25599007,+	p1@RHD
3.29e-195	FFCP PHASE2:Hg19::chr16:15616042..15616045,+	p@chr16:15616042..15616045, +
3.29e-195	FFCP PHASE2:Hg19::chr1:95582484..95582492,+	p10@TMEM56
3.29e-195	FFCP PHASE2:Hg19::chr19:1207927..1207939,-	p@chr19:1207927..1207939, -
3.29e-195	FFCP PHASE2:Hg19::chr17:42366115..42366125,+	p@chr17:42366115..42366125, +
3.29e-195	FFCP PHASE2:Hg19::chr1:220146675..220146678,-	p@chr1:220146675..220146678, -
3.29e-195	FFCP PHASE1:Hg19::chr9:123853258..123853276,-	p@chr9:123853258..123853276, -
3.29e-195	FFCP PHASE2:Hg19::chr4:82805715..82805717,+	p@chr4:82805715..82805717, +
3.29e-195	FFCP PHASE2:Hg19::chr11:115492263..115492265,+	p@chr11:115492263..115492265, +
3.29e-195	FFCP PHASE1:Hg19::chr16:15616042..15616045,+	p@chr16:15616042..15616045, +
3.29e-195	FFCP PHASE2:Hg19::chr6:155472342..155472346,-	p@chr6:155472342..155472346, -
3.29e-195	FFCP PHASE1:Hg19::chr4:26378984..26378987,+	p@chr4:26378984..26378987, +
3.29e-195	FFCP PHASE1:Hg19::chr3:49726589..49726592,+	p7@RNF123
3.29e-195	FFCP PHASE2:Hg19::chr1:5543682..5543685,+	p@chr1:5543682..5543685, +
3.29e-195	FFCP PHASE2:Hg19::chr12:75560876..75560881,+	p@chr12:75560876..75560881, +
3.29e-195	FFCP PHASE1:Hg19::chr17:27188395..27188398,-	p1@MIR451A
3.29e-195	FFCP PHASE1:Hg19::chr2:112191654..112191660,-	p@chr2:112191654..112191660, -
3.29e-195	FFCP PHASE2:Hg19::chr16:67228546..67228549,+	p@chr16:67228546..67228549, +
3.29e-195	FFCP PHASE2:Hg19::chr12:131245491..131245492,+	p@chr12:131245491..131245492, +
3.29e-195	FFCP PHASE2:Hg19::chr15:71406717..71406718,+	p@chr15:71406717..71406718, +
3.29e-195	FFCP PHASE1:Hg19::chr12:75560876..75560881,+	p@chr12:75560876..75560881, +
3.29e-195	FFCP PHASE2:Hg19::chr7:23205201..23205207,+	p13@KLHL7
3.29e-195	FFCP PHASE2:Hg19::chr14:96742091..96742094,-	p@chr14:96742091..96742094, -
3.29e-195	FFCP PHASE1:Hg19::chr4:160049078..160049079,+	p@chr4:160049078..160049079, +
3.29e-195	FFCP PHASE2:Hg19::chr17:42343955..42343974,-	p@chr17:42343955..42343974, -

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