FFCP PHASE1:Mm9::chr1:175603782..175603817,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100033459|HGNC=|MCL_coexpression_id=1124|UniProt=Q3V3Q4,D3Z5G0|association_with_transcript=0bp_to_NM_001162938,uc007drs.1,uc007drt.1_5end|description=CAGE_peak_1_at_Pydc3_5end|id=chr1:175603782..175603817,+|ontology_enrichment_celltype=CL:0002031!2.51e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,1.23e-16,25;CL:0000791,5.69e-13,9;CL:0000789,5.69e-13,9;CL:0002420,5.69e-13,9;CL:0002419,5.69e-13,9;CL:0000790,5.69e-13,9;CL:0000988,4.85e-12,32;CL:0002032,4.85e-12,32;CL:0000037,4.85e-12,32;CL:0000837,4.85e-12,32;CL:0000838,6.22e-12,12;CL:0000738,7.10e-12,17;CL:0002087,7.10e-12,17;CL:0000624,4.09e-11,8;CL:0000542,7.39e-11,13;CL:0000051,7.39e-11,13;CL:0002320,1.16e-10,46;CL:0000134,1.16e-10,46;CL:0000084,2.62e-10,11;CL:0000827,2.62e-10,11;CL:0000219,2.37e-08,54;CL:0000553,2.93e-08,6;CL:0000556,2.93e-08,6;CL:0000893,9.32e-08,6;CL:0002489,9.32e-08,6;CL:0000898,9.32e-08,6;CL:0000809,9.32e-08,6;CL:0000810,9.32e-08,6;CL:0000895,9.32e-08,6;CL:0000808,9.32e-08,6;CL:0000894,9.32e-08,6;CL:0000806,9.32e-08,6;CL:0000807,9.32e-08,6;CL:0000805,9.32e-08,6;CL:0002425,9.32e-08,6;CL:0002436,9.32e-08,6;CL:0002427,9.32e-08,6;CL:0002428,9.32e-08,6;CL:0002429,9.32e-08,6;CL:0002433,9.32e-08,6;CL:0002431,9.32e-08,6;CL:0002432,9.32e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.69e-13!70;UBERON:0000077!5.53e-13!97;UBERON:0000926!8.63e-13!193;UBERON:0004120!8.63e-13!193;UBERON:0006603!8.63e-13!193;UBERON:0005057!1.21e-12!51;UBERON:0004177!3.25e-12!29;UBERON:0001041!5.00e-12!92;UBERON:0002193!5.44e-12!48;UBERON:0002390!2.02e-11!45;UBERON:0003061!2.02e-11!45;UBERON:0000065!3.08e-10!41;UBERON:0003104!4.10e-10!131;UBERON:0009142!4.10e-10!131;UBERON:0001004!9.98e-10!42;UBERON:0003081!1.42e-09!88;UBERON:0001048!2.01e-09!147;UBERON:0005911!2.56e-09!69;UBERON:0004119!4.48e-09!130;UBERON:0000925!4.48e-09!130;UBERON:0006595!4.48e-09!130;UBERON:0006562!5.56e-09!24;UBERON:0001557!5.56e-09!24;UBERON:0001042!5.56e-09!24;UBERON:0008814!5.56e-09!24;UBERON:0009145!5.56e-09!24;UBERON:0002370!8.34e-09!23;UBERON:0000974!8.34e-09!23;UBERON:0004807!8.34e-09!23;UBERON:0005058!8.34e-09!23;UBERON:0003351!8.34e-09!23;UBERON:0009113!8.34e-09!23;UBERON:0003295!8.34e-09!23;UBERON:0009722!8.34e-09!23;UBERON:0005562!8.34e-09!23;UBERON:0007690!8.34e-09!23;UBERON:0001007!1.66e-08!128;UBERON:0001555!1.66e-08!128;UBERON:0007026!1.66e-08!128;UBERON:0004921!1.94e-08!126;UBERON:0004185!1.94e-08!126;UBERON:0003408!3.85e-08!24;UBERON:0002530!6.28e-08!65;UBERON:0000072!3.54e-07!27;UBERON:0000949!5.08e-07!72;UBERON:0002368!5.36e-07!60;UBERON:0009569!9.18e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.08e-22,48;UBERON:0002405,6.08e-22,48;UBERON:0002390,1.12e-21,45;UBERON:0003061,1.12e-21,45;UBERON:0004177,4.23e-18,29;UBERON:0005057,4.23e-18,29;UBERON:0000077,9.41e-18,35;UBERON:0000065,1.28e-17,41;UBERON:0001004,4.70e-17,42;UBERON:0001041,2.53e-16,80;UBERON:0005911,1.40e-14,69;UBERON:0002370,1.84e-14,23;UBERON:0000974,1.84e-14,23;UBERON:0004807,1.84e-14,23;UBERON:0005058,1.84e-14,23;UBERON:0003351,1.84e-14,23;UBERON:0009113,1.84e-14,23;UBERON:0003295,1.84e-14,23;UBERON:0009722,1.84e-14,23;UBERON:0005562,1.84e-14,23;UBERON:0007690,1.84e-14,23;UBERON:0006562,1.06e-13,24;UBERON:0003408,1.06e-13,24;UBERON:0001557,1.06e-13,24;UBERON:0001042,1.06e-13,24;UBERON:0008814,1.06e-13,24;UBERON:0009145,1.06e-13,24;UBERON:0000072,9.39e-12,27;UBERON:0002384,1.16e-10,46;UBERON:0003081,1.30e-10,87;UBERON:0004119,3.76e-09,118;UBERON:0000925,3.76e-09,118;UBERON:0006595,3.76e-09,118;UBERON:0003929,3.78e-09,55;UBERON:0004921,5.29e-09,114;UBERON:0001007,1.04e-08,116;UBERON:0001555,1.04e-08,116;UBERON:0007026,1.04e-08,116;UBERON:0002368,5.81e-08,60;UBERON:0007811,6.69e-08,36;UBERON:0002530,8.35e-08,65;UBERON:0000949,3.00e-07,72;UBERON:0001048,4.02e-07,134;UBERON:0000926,5.61e-07,120;UBERON:0004120,5.61e-07,120;UBERON:0006603,5.61e-07,120;UBERON:0002048,8.29e-07,14;UBERON:0000117,8.29e-07,14;UBERON:0000171,8.29e-07,14;UBERON:0000170,8.29e-07,14;UBERON:0005597,8.29e-07,14;UBERON:0000118,8.29e-07,14;UBERON:0000490,8.65e-07,66|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,5.77233760821834,1.17032263160997,2.05461561870606,0,117.101299272945,9.61624426608971,1.33243904726265,8.09901069559304,0,41.16781257925,34.141493967829,20.7950929381035,0.0850432901510698,0,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0,0,0,0.782391344348039,0,0,0,0,0,17.9527388481778,43.5217285206807,72.2601668156298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1310562543107,4.30211938490693,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0,52.5643903803759,0.742210695324124,0,0,0,0.150722640552623,0.23517741427141,0.502666365318702,0.741584903203122,1.3013942122792,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0.210289948564127,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.596869416123452,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0.196558995113203,0.449724224769707,0,0,0,0.863088412352432,0.324270453550071,0.549122826376163,0,1.86070473834252,0.312037673114561,1.01031551178845,0.358794827043824,1.4473305640901,6.28160846566456,0,0,0,0,0.167506257441816,1.6663054862021,0.780534591431195,1.26108115284953,1.99318220683897,1.91345722388985,3.60499292374624,3.10832967358612,2.89298117163023,3.01582567878545,7.07077388964322,0.491764273019036,1.37968373152366,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,1.22974059177571,0,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0,0,1.17335854031855,0.21183207086382,0.220528398054962,0.32977250588296,0,0.180938774784468,0,0,0,0,4.27177201994632,0.412773735926445,1.29636169158798,0.753473828018764,3.2806614653046,2.97411625168479,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,9.48033361884535,0,0.513554785824136,0.649604114888975,1.61124026100733,0.79472541912506,2.40390899039938,1.9199638532695,1.71642964911851,2.13379058634,2.11734988787365,5.55509920216589,2.30908419936791,3.62318396762864,0.226730383615211,0,0,0,0.579568782096571,1.50145980360946,1.09890974560359,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.943131706930381,0.187283014939765,0.0640251524048693,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0.231867835620421|short_description=p1@Pydc3}} | ||
|EntrezGene=100033459 | |||
|HGNC= | |||
|MCL_coexpression_id=1124 | |||
|UniProt=Q3V3Q4,D3Z5G0 | |||
|association_with_transcript=0bp_to_NM_001162938,uc007drs.1,uc007drt.1_5end | |||
|description=CAGE_peak_1_at_Pydc3_5end | |||
|id=chr1:175603782..175603817,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.51e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.23e-16,25;CL:0000791,5.69e-13,9;CL:0000789,5.69e-13,9;CL:0002420,5.69e-13,9;CL:0002419,5.69e-13,9;CL:0000790,5.69e-13,9;CL:0000988,4.85e-12,32;CL:0002032,4.85e-12,32;CL:0000037,4.85e-12,32;CL:0000837,4.85e-12,32;CL:0000838,6.22e-12,12;CL:0000738,7.10e-12,17;CL:0002087,7.10e-12,17;CL:0000624,4.09e-11,8;CL:0000542,7.39e-11,13;CL:0000051,7.39e-11,13;CL:0002320,1.16e-10,46;CL:0000134,1.16e-10,46;CL:0000084,2.62e-10,11;CL:0000827,2.62e-10,11;CL:0000219,2.37e-08,54;CL:0000553,2.93e-08,6;CL:0000556,2.93e-08,6;CL:0000893,9.32e-08,6;CL:0002489,9.32e-08,6;CL:0000898,9.32e-08,6;CL:0000809,9.32e-08,6;CL:0000810,9.32e-08,6;CL:0000895,9.32e-08,6;CL:0000808,9.32e-08,6;CL:0000894,9.32e-08,6;CL:0000806,9.32e-08,6;CL:0000807,9.32e-08,6;CL:0000805,9.32e-08,6;CL:0002425,9.32e-08,6;CL:0002436,9.32e-08,6;CL:0002427,9.32e-08,6;CL:0002428,9.32e-08,6;CL:0002429,9.32e-08,6;CL:0002433,9.32e-08,6;CL:0002431,9.32e-08,6;CL:0002432,9.32e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.69e-13!70;UBERON:0000077!5.53e-13!97;UBERON:0000926!8.63e-13!193;UBERON:0004120!8.63e-13!193;UBERON:0006603!8.63e-13!193;UBERON:0005057!1.21e-12!51;UBERON:0004177!3.25e-12!29;UBERON:0001041!5.00e-12!92;UBERON:0002193!5.44e-12!48;UBERON:0002390!2.02e-11!45;UBERON:0003061!2.02e-11!45;UBERON:0000065!3.08e-10!41;UBERON:0003104!4.10e-10!131;UBERON:0009142!4.10e-10!131;UBERON:0001004!9.98e-10!42;UBERON:0003081!1.42e-09!88;UBERON:0001048!2.01e-09!147;UBERON:0005911!2.56e-09!69;UBERON:0004119!4.48e-09!130;UBERON:0000925!4.48e-09!130;UBERON:0006595!4.48e-09!130;UBERON:0006562!5.56e-09!24;UBERON:0001557!5.56e-09!24;UBERON:0001042!5.56e-09!24;UBERON:0008814!5.56e-09!24;UBERON:0009145!5.56e-09!24;UBERON:0002370!8.34e-09!23;UBERON:0000974!8.34e-09!23;UBERON:0004807!8.34e-09!23;UBERON:0005058!8.34e-09!23;UBERON:0003351!8.34e-09!23;UBERON:0009113!8.34e-09!23;UBERON:0003295!8.34e-09!23;UBERON:0009722!8.34e-09!23;UBERON:0005562!8.34e-09!23;UBERON:0007690!8.34e-09!23;UBERON:0001007!1.66e-08!128;UBERON:0001555!1.66e-08!128;UBERON:0007026!1.66e-08!128;UBERON:0004921!1.94e-08!126;UBERON:0004185!1.94e-08!126;UBERON:0003408!3.85e-08!24;UBERON:0002530!6.28e-08!65;UBERON:0000072!3.54e-07!27;UBERON:0000949!5.08e-07!72;UBERON:0002368!5.36e-07!60;UBERON:0009569!9.18e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.08e-22,48;UBERON:0002405,6.08e-22,48;UBERON:0002390,1.12e-21,45;UBERON:0003061,1.12e-21,45;UBERON:0004177,4.23e-18,29;UBERON:0005057,4.23e-18,29;UBERON:0000077,9.41e-18,35;UBERON:0000065,1.28e-17,41;UBERON:0001004,4.70e-17,42;UBERON:0001041,2.53e-16,80;UBERON:0005911,1.40e-14,69;UBERON:0002370,1.84e-14,23;UBERON:0000974,1.84e-14,23;UBERON:0004807,1.84e-14,23;UBERON:0005058,1.84e-14,23;UBERON:0003351,1.84e-14,23;UBERON:0009113,1.84e-14,23;UBERON:0003295,1.84e-14,23;UBERON:0009722,1.84e-14,23;UBERON:0005562,1.84e-14,23;UBERON:0007690,1.84e-14,23;UBERON:0006562,1.06e-13,24;UBERON:0003408,1.06e-13,24;UBERON:0001557,1.06e-13,24;UBERON:0001042,1.06e-13,24;UBERON:0008814,1.06e-13,24;UBERON:0009145,1.06e-13,24;UBERON:0000072,9.39e-12,27;UBERON:0002384,1.16e-10,46;UBERON:0003081,1.30e-10,87;UBERON:0004119,3.76e-09,118;UBERON:0000925,3.76e-09,118;UBERON:0006595,3.76e-09,118;UBERON:0003929,3.78e-09,55;UBERON:0004921,5.29e-09,114;UBERON:0001007,1.04e-08,116;UBERON:0001555,1.04e-08,116;UBERON:0007026,1.04e-08,116;UBERON:0002368,5.81e-08,60;UBERON:0007811,6.69e-08,36;UBERON:0002530,8.35e-08,65;UBERON:0000949,3.00e-07,72;UBERON:0001048,4.02e-07,134;UBERON:0000926,5.61e-07,120;UBERON:0004120,5.61e-07,120;UBERON:0006603,5.61e-07,120;UBERON:0002048,8.29e-07,14;UBERON:0000117,8.29e-07,14;UBERON:0000171,8.29e-07,14;UBERON:0000170,8.29e-07,14;UBERON:0005597,8.29e-07,14;UBERON:0000118,8.29e-07,14;UBERON:0000490,8.65e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,5.77233760821834,1.17032263160997,2.05461561870606,0,117.101299272945,9.61624426608971,1.33243904726265,8.09901069559304,0,41.16781257925,34.141493967829,20.7950929381035,0.0850432901510698,0,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0,0,0,0.782391344348039,0,0,0,0,0,17.9527388481778,43.5217285206807,72.2601668156298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1310562543107,4.30211938490693,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0,52.5643903803759,0.742210695324124,0,0,0,0.150722640552623,0.23517741427141,0.502666365318702,0.741584903203122,1.3013942122792,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0,0.210289948564127,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.596869416123452,0,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.470996183524124,0.246794327843601,0,0,0.196558995113203,0.449724224769707,0,0,0,0.863088412352432,0.324270453550071,0.549122826376163,0,1.86070473834252,0.312037673114561,1.01031551178845,0.358794827043824,1.4473305640901,6.28160846566456,0,0,0,0,0.167506257441816,1.6663054862021,0.780534591431195,1.26108115284953,1.99318220683897,1.91345722388985,3.60499292374624,3.10832967358612,2.89298117163023,3.01582567878545,7.07077388964322,0.491764273019036,1.37968373152366,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,1.22974059177571,0,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0,0,1.17335854031855,0.21183207086382,0.220528398054962,0.32977250588296,0,0.180938774784468,0,0,0,0,4.27177201994632,0.412773735926445,1.29636169158798,0.753473828018764,3.2806614653046,2.97411625168479,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,9.48033361884535,0,0.513554785824136,0.649604114888975,1.61124026100733,0.79472541912506,2.40390899039938,1.9199638532695,1.71642964911851,2.13379058634,2.11734988787365,5.55509920216589,2.30908419936791,3.62318396762864,0.226730383615211,0,0,0,0.579568782096571,1.50145980360946,1.09890974560359,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.943131706930381,0.187283014939765,0.0640251524048693,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0.231867835620421 | |||
|short_description=p1@Pydc3 | |||
}} |
Revision as of 19:48, 13 September 2013
Short description: | p1@Pydc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pydc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1124 |
Association with transcript: | 0bp_to_NM_001162938, uc007drs.1, uc007drt.1_5end |
EntrezGene: | Pydc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.