FFCP PHASE1:Hg19::chr19:5720666..5720700,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=257062|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28598|TSSclassifier=S|UniProt=F5GZE9,Q86XM0,B7WNK5|association_with_transcript=0bp_to_ENST00000381614,ENST00000381624,ENST00000394548,NM_152784,uc002mda.2,uc010duj.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_1_at_TMEM146_5end|id=chr19:5720666..5720700,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;3.67e-23;1!CL:0002188;1.77e-18;5!CL:1000746;1.69e-13;7!CL:1000612;1.69e-13;7!CL:0002567;1.26e-08;3!CL:0002681;2.85e-08;12!CL:0002584;2.85e-08;12!CL:1000449;8.58e-07;15|ontology_enrichment_celltype_v019_2=CL:0002591,6.40e-23,1;CL:0002188,1.62e-18,5;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0002567,1.40e-08,3;CL:0002681,2.75e-08,12;CL:0002584,2.75e-08,12;CL:1000449,8.33e-07,15|ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!UBERON:0006215;1.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!6.54e-12!33;UBERON:0001893!1.95e-11!34;UBERON:0001049!2.31e-11!57;UBERON:0005068!2.31e-11!57;UBERON:0006241!2.31e-11!57;UBERON:0007135!2.31e-11!57;UBERON:0002616!9.88e-11!59;UBERON:0002020!3.66e-10!34;UBERON:0003528!3.66e-10!34;UBERON:0002780!4.29e-10!41;UBERON:0001890!4.29e-10!41;UBERON:0006240!4.29e-10!41;UBERON:0000956!4.70e-10!25;UBERON:0000203!4.70e-10!25;UBERON:0002619!6.72e-10!22;UBERON:0003080!9.56e-10!42;UBERON:0001869!1.08e-09!32;UBERON:0000955!3.86e-09!69;UBERON:0006238!3.86e-09!69;UBERON:0002346!5.49e-08!90;UBERON:0003075!6.84e-08!86;UBERON:0007284!6.84e-08!86;UBERON:0005743!9.75e-08!86;UBERON:0001950!1.08e-07!20;UBERON:0001017!1.32e-07!82;UBERON:0003056!4.82e-07!61|ontology_enrichment_uberon_v019=UBERON:0000074;1.69e-13;7!UBERON:0001229;1.69e-13;7!UBERON:0000078;2.74e-12;2!UBERON:0002012;2.74e-12;2!UBERON:0008886;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0001225;2.85e-08;12!UBERON:0008987;2.85e-08;12!UBERON:0001851;8.58e-07;15!UBERON:0006555;8.58e-07;15!UBERON:0000353;8.58e-07;15!UBERON:0004819;8.58e-07;15!UBERON:0001285;8.58e-07;15!UBERON:0007684;8.58e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.58e-13,7;UBERON:0000074,1.58e-13,7;UBERON:0001229,1.58e-13,7;UBERON:0001230,1.58e-13,7;UBERON:0003220,1.58e-13,7;UBERON:0005749,1.58e-13,7;UBERON:0004199,1.58e-13,7;UBERON:0004209,1.58e-13,7;UBERON:0004198,1.58e-13,7;UBERON:0000473,3.54e-12,8;UBERON:0000078,3.62e-12,2;UBERON:0007497,3.62e-12,2;UBERON:0003643,3.62e-12,2;UBERON:0003504,3.62e-12,2;UBERON:0003469,3.62e-12,2;UBERON:0003496,3.62e-12,2;UBERON:0002012,3.62e-12,2;UBERON:0008886,3.62e-12,2;UBERON:0007303,3.62e-12,2;UBERON:0002061,3.62e-12,2;UBERON:0005432,3.62e-12,2;UBERON:0004363,3.62e-12,2;UBERON:0005103,5.83e-12,8;UBERON:0000083,5.83e-12,8;UBERON:0009201,5.83e-12,8;UBERON:0006553,5.83e-12,8;UBERON:0003074,5.83e-12,8;UBERON:0003060,5.83e-12,8;UBERON:0000080,9.69e-11,9;UBERON:0002120,9.69e-11,9;UBERON:0004875,9.69e-11,9;UBERON:0005721,9.69e-11,9;UBERON:0005754,9.69e-11,9;UBERON:0007297,9.69e-11,9;UBERON:0003135,4.08e-09,11;UBERON:0004876,5.87e-09,11;UBERON:0004145,1.51e-08,3;UBERON:0001225,2.75e-08,12;UBERON:0008987,2.75e-08,12;UBERON:0003887,2.75e-08,12;UBERON:0003886,6.01e-07,54;UBERON:0001851,8.33e-07,15;UBERON:0004211,8.33e-07,15;UBERON:0009773,8.33e-07,15;UBERON:0000353,8.33e-07,15;UBERON:0001231,8.33e-07,15;UBERON:0001285,8.33e-07,15;UBERON:0007684,8.33e-07,15;UBERON:0004208,8.33e-07,15|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,6.7454223881322,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.25645012511638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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=257062 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28598 | |||
|TSSclassifier=S | |||
|UniProt=F5GZE9,Q86XM0,B7WNK5 | |||
|association_with_transcript=0bp_to_ENST00000381614,ENST00000381624,ENST00000394548,NM_152784,uc002mda.2,uc010duj.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_TMEM146_5end | |||
|id=chr19:5720666..5720700,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;3.67e-23;1!CL:0002188;1.77e-18;5!CL:1000746;1.69e-13;7!CL:1000612;1.69e-13;7!CL:0002567;1.26e-08;3!CL:0002681;2.85e-08;12!CL:0002584;2.85e-08;12!CL:1000449;8.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.40e-23,1;CL:0002188,1.62e-18,5;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0002567,1.40e-08,3;CL:0002681,2.75e-08,12;CL:0002584,2.75e-08,12;CL:1000449,8.33e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!UBERON:0006215;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!6.54e-12!33;UBERON:0001893!1.95e-11!34;UBERON:0001049!2.31e-11!57;UBERON:0005068!2.31e-11!57;UBERON:0006241!2.31e-11!57;UBERON:0007135!2.31e-11!57;UBERON:0002616!9.88e-11!59;UBERON:0002020!3.66e-10!34;UBERON:0003528!3.66e-10!34;UBERON:0002780!4.29e-10!41;UBERON:0001890!4.29e-10!41;UBERON:0006240!4.29e-10!41;UBERON:0000956!4.70e-10!25;UBERON:0000203!4.70e-10!25;UBERON:0002619!6.72e-10!22;UBERON:0003080!9.56e-10!42;UBERON:0001869!1.08e-09!32;UBERON:0000955!3.86e-09!69;UBERON:0006238!3.86e-09!69;UBERON:0002346!5.49e-08!90;UBERON:0003075!6.84e-08!86;UBERON:0007284!6.84e-08!86;UBERON:0005743!9.75e-08!86;UBERON:0001950!1.08e-07!20;UBERON:0001017!1.32e-07!82;UBERON:0003056!4.82e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.69e-13;7!UBERON:0001229;1.69e-13;7!UBERON:0000078;2.74e-12;2!UBERON:0002012;2.74e-12;2!UBERON:0008886;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0001225;2.85e-08;12!UBERON:0008987;2.85e-08;12!UBERON:0001851;8.58e-07;15!UBERON:0006555;8.58e-07;15!UBERON:0000353;8.58e-07;15!UBERON:0004819;8.58e-07;15!UBERON:0001285;8.58e-07;15!UBERON:0007684;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.58e-13,7;UBERON:0000074,1.58e-13,7;UBERON:0001229,1.58e-13,7;UBERON:0001230,1.58e-13,7;UBERON:0003220,1.58e-13,7;UBERON:0005749,1.58e-13,7;UBERON:0004199,1.58e-13,7;UBERON:0004209,1.58e-13,7;UBERON:0004198,1.58e-13,7;UBERON:0000473,3.54e-12,8;UBERON:0000078,3.62e-12,2;UBERON:0007497,3.62e-12,2;UBERON:0003643,3.62e-12,2;UBERON:0003504,3.62e-12,2;UBERON:0003469,3.62e-12,2;UBERON:0003496,3.62e-12,2;UBERON:0002012,3.62e-12,2;UBERON:0008886,3.62e-12,2;UBERON:0007303,3.62e-12,2;UBERON:0002061,3.62e-12,2;UBERON:0005432,3.62e-12,2;UBERON:0004363,3.62e-12,2;UBERON:0005103,5.83e-12,8;UBERON:0000083,5.83e-12,8;UBERON:0009201,5.83e-12,8;UBERON:0006553,5.83e-12,8;UBERON:0003074,5.83e-12,8;UBERON:0003060,5.83e-12,8;UBERON:0000080,9.69e-11,9;UBERON:0002120,9.69e-11,9;UBERON:0004875,9.69e-11,9;UBERON:0005721,9.69e-11,9;UBERON:0005754,9.69e-11,9;UBERON:0007297,9.69e-11,9;UBERON:0003135,4.08e-09,11;UBERON:0004876,5.87e-09,11;UBERON:0004145,1.51e-08,3;UBERON:0001225,2.75e-08,12;UBERON:0008987,2.75e-08,12;UBERON:0003887,2.75e-08,12;UBERON:0003886,6.01e-07,54;UBERON:0001851,8.33e-07,15;UBERON:0004211,8.33e-07,15;UBERON:0009773,8.33e-07,15;UBERON:0000353,8.33e-07,15;UBERON:0001231,8.33e-07,15;UBERON:0001285,8.33e-07,15;UBERON:0007684,8.33e-07,15;UBERON:0004208,8.33e-07,15 | |||
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|short_description=p1@TMEM146 | |||
}} |
Revision as of 22:35, 11 September 2013
Short description: | p1@TMEM146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEM146_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000381614, ENST00000381624, ENST00000394548, NM_152784, uc002mda.2, uc010duj.1_5end |
EntrezGene: | TMEM146 |
HGNC: | 28598 |
UniProt: | F5GZE9Q86XM0B7WNK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.40e-23 | 1 |
glomerular endothelial cell | 1.62e-18 | 5 |
glomerular cell | 1.58e-13 | 7 |
kidney corpuscule cell | 1.58e-13 | 7 |
light melanocyte | 1.40e-08 | 3 |
kidney cortical cell | 2.75e-08 | 12 |
renal cortical epithelial cell | 2.75e-08 | 12 |
epithelial cell of nephron | 8.33e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.