FFCP PHASE1:Hg19::chr16:6069043..6069067,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18222|TSSclassifier=S|UniProt=F8VR27|association_with_transcript=-27bp_to_ENST00000547605_5end|coexpression_cluster_id=C10|description=CAGE_peak_9_at_RBFOX1_5end|id=chr16:6069043..6069067,+|ontology_enrichment_celltype=CL:0000047!9.28e-10!8;CL:0002322!8.35e-07!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,9.85e-07,8|ontology_enrichment_development_v019=UBERON:0006601;3.47e-19;82!UBERON:0006215;4.02e-11;3!UBERON:0006241;4.00e-10;3!UBERON:0003057;4.00e-10;3!UBERON:0010122;1.03e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-83!82;UBERON:0001049!1.48e-82!57;UBERON:0005068!1.48e-82!57;UBERON:0006241!1.48e-82!57;UBERON:0007135!1.48e-82!57;UBERON:0000073!1.29e-81!94;UBERON:0001016!1.29e-81!94;UBERON:0005743!4.04e-79!86;UBERON:0002616!6.32e-69!59;UBERON:0001869!1.17e-66!32;UBERON:0001893!3.49e-66!34;UBERON:0002020!3.81e-66!34;UBERON:0003528!3.81e-66!34;UBERON:0000955!6.20e-65!69;UBERON:0006238!6.20e-65!69;UBERON:0002780!1.36e-64!41;UBERON:0001890!1.36e-64!41;UBERON:0006240!1.36e-64!41;UBERON:0002791!4.86e-64!33;UBERON:0003080!7.85e-63!42;UBERON:0003075!1.53e-57!86;UBERON:0007284!1.53e-57!86;UBERON:0002346!9.02e-57!90;UBERON:0002619!1.34e-53!22;UBERON:0000956!2.10e-50!25;UBERON:0000203!2.10e-50!25;UBERON:0001950!5.54e-49!20;UBERON:0000924!5.45e-45!173;UBERON:0006601!5.45e-45!173;UBERON:0004121!8.81e-45!169;UBERON:0007023!3.62e-43!115;UBERON:0003056!3.37e-40!61;UBERON:0000033!4.21e-34!123;UBERON:0000153!6.80e-32!129;UBERON:0007811!6.80e-32!129;UBERON:0000025!9.23e-22!194;UBERON:0003076!8.20e-20!15;UBERON:0003057!8.20e-20!15;UBERON:0001871!1.29e-19!7;UBERON:0002420!9.80e-18!9;UBERON:0007245!9.80e-18!9;UBERON:0010009!9.80e-18!9;UBERON:0010011!9.80e-18!9;UBERON:0000454!9.80e-18!9;UBERON:0002308!8.48e-17!9;UBERON:0000125!8.48e-17!9;UBERON:0004111!2.44e-16!241;UBERON:0004732!3.05e-16!13;UBERON:0000200!4.76e-15!6;UBERON:0004733!2.79e-14!12;UBERON:0002028!2.79e-14!12;UBERON:0007277!2.79e-14!12;UBERON:0000477!1.14e-13!286;UBERON:0000349!3.69e-13!5;UBERON:0009663!4.17e-13!7;UBERON:0001872!6.77e-13!5;UBERON:0002021!7.28e-13!5;UBERON:0000064!1.18e-11!219;UBERON:0000483!1.40e-11!309;UBERON:0000119!2.50e-11!312;UBERON:0000369!3.54e-11!4;UBERON:0002435!3.54e-11!4;UBERON:0000204!3.54e-11!4;UBERON:0010082!3.54e-11!4;UBERON:0002298!1.01e-09!8;UBERON:0002680!4.90e-09!9;UBERON:0001895!4.90e-09!9;UBERON:0010092!4.90e-09!9;UBERON:0000922!5.00e-09!612;UBERON:0005383!5.88e-09!3;UBERON:0005382!5.88e-09!3;UBERON:0002771!1.55e-08!3;UBERON:0000475!3.40e-08!365;UBERON:0002240!1.65e-07!3;UBERON:0000988!1.77e-07!3;UBERON:0001896!2.12e-07!3;UBERON:0005290!2.12e-07!3;UBERON:0010096!2.12e-07!3;UBERON:0000468!5.86e-07!659;UBERON:0000923!9.74e-07!604;UBERON:0005291!9.74e-07!604;UBERON:0006598!9.74e-07!604;UBERON:0002532!9.74e-07!604|ontology_enrichment_uberon_v019=UBERON:0001869;4.55e-81;32!UBERON:0002619;1.22e-76;22!UBERON:0002791;2.21e-76;32!UBERON:0003528;4.48e-73;34!UBERON:0002020;4.48e-73;34!UBERON:0001893;1.55e-72;34!UBERON:0001950;5.44e-70;20!UBERON:0000956;4.59e-67;25!UBERON:0000203;4.59e-67;25!UBERON:0002780;2.77e-60;41!UBERON:0001890;2.77e-60;41!UBERON:0000073;4.76e-53;53!UBERON:0002616;4.76e-53;53!UBERON:0001017;5.90e-41;75!UBERON:0000955;6.50e-39;68!UBERON:0001016;4.44e-37;83!UBERON:0002420;5.11e-25;9!UBERON:0007245;5.11e-25;9!UBERON:0010009;5.11e-25;9!UBERON:0010011;5.11e-25;9!UBERON:0000454;5.11e-25;9!UBERON:0001871;2.25e-24;6!UBERON:0000200;5.45e-21;6!UBERON:0004732;5.00e-19;13!UBERON:0000125;1.37e-18;9!UBERON:0002308;1.37e-18;9!UBERON:0009663;2.39e-18;7!UBERON:0000349;3.32e-18;5!UBERON:0001872;7.16e-18;5!UBERON:0002021;8.66e-18;5!UBERON:0004733;2.52e-16;12!UBERON:0002028;2.52e-16;12!UBERON:0000369;2.13e-15;4!UBERON:0002435;2.13e-15;4!UBERON:0000204;2.13e-15;4!UBERON:0011216;2.84e-14;132!UBERON:0007023;7.40e-14;114!UBERON:0002298;4.18e-13;6!UBERON:0005383;3.33e-12;3!UBERON:0005382;3.33e-12;3!UBERON:0001870;2.12e-11;3!UBERON:0002240;4.00e-10;3!UBERON:0005174;4.00e-10;3!UBERON:0001137;4.00e-10;3!UBERON:0001896;5.53e-10;3!UBERON:0005290;5.53e-10;3!UBERON:0010314;2.49e-09;132!UBERON:0002680;2.98e-09;9!UBERON:0001895;2.98e-09;9!UBERON:0001873;1.03e-08;2!UBERON:0001876;1.59e-08;2!UBERON:0002771;2.45e-08;2!UBERON:0002702;2.63e-08;2!UBERON:0001954;3.49e-08;2!UBERON:0003022;3.49e-08;2!UBERON:0002421;3.49e-08;2!UBERON:0002600;3.49e-08;2!UBERON:0001875;7.38e-08;2!UBERON:0006514;7.38e-08;2!UBERON:0001897;1.59e-07;2!UBERON:0010225;1.59e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.71e-108,56;UBERON:0005068,2.71e-108,56;UBERON:0006241,2.71e-108,56;UBERON:0007135,2.71e-108,56;UBERON:0001016,4.45e-102,89;UBERON:0001017,1.62e-101,81;UBERON:0000073,1.47e-99,53;UBERON:0002616,1.47e-99,53;UBERON:0001869,1.79e-90,32;UBERON:0000955,2.44e-86,68;UBERON:0006238,2.44e-86,68;UBERON:0001893,7.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |||
|TSSclassifier=S | |||
|UniProt=F8VR27 | |||
|association_with_transcript=-27bp_to_ENST00000547605_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_RBFOX1_5end | |||
|id=chr16:6069043..6069067,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.28e-10!8;CL:0002322!8.35e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.85e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.47e-19;82!UBERON:0006215;4.02e-11;3!UBERON:0006241;4.00e-10;3!UBERON:0003057;4.00e-10;3!UBERON:0010122;1.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@RBFOX1 | |||
}} |
Revision as of 11:00, 11 September 2013
Short description: | p9@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RBFOX1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -27bp_to_ENST00000547605_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | F8VR27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.85e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.