UBERON:0006514
From FANTOM5_SSTAR
Name: | pallidum | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "Part of what are called the basal ganglia of the brain which consist of the globus pallidus and the ventral pallidum." [http://www.medterms.com/script/main/art.asp?articlekey | |
Xrefs: |
| |
Synonyms: |
"neuraxis pallidum" EXACT [FMA:83684] "pallidum of neuraxis" EXACT [FMA:83684] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003528(brain grey matter) |
---|---|
part_of: | UBERON:0002420(basal ganglion) |
Children
part of: | UBERON:0001875 (globus pallidus) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10161-103A8 (globus pallidus, adult, donor10252)
- 10175-103C4 (globus pallidus - adult, donor10196)
- 10364-105F4 (globus pallidus, newborn, donor10223)
- 10367-105F7 (globus pallidus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006514 (pallidum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data