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FFCP PHASE1:Mm9::chr2:79095606..79095627,+: Difference between revisions

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{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=599|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25|association_with_transcript=23bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end|description=CAGE_peak_6_at_Itga4_5end|id=chr2:79095606..79095627,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,7.73e-11,25;CL:0000988,1.34e-09,32;CL:0002032,1.34e-09,32;CL:0000037,1.34e-09,32;CL:0000837,1.34e-09,32;CL:0000553,7.59e-09,6;CL:0000556,7.59e-09,6;CL:0000050,3.00e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.44e-09!29;UBERON:0002405!1.50e-09!70;UBERON:0005057!2.19e-09!51;UBERON:0002193!8.18e-09!48;UBERON:0002390!1.77e-08!45;UBERON:0003061!1.77e-08!45|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.39e-18,45;UBERON:0003061,7.39e-18,45;UBERON:0002193,9.19e-18,48;UBERON:0002405,9.19e-18,48;UBERON:0004177,1.11e-16,29;UBERON:0005057,1.11e-16,29;UBERON:0000077,1.04e-12,35;UBERON:0001041,8.36e-11,80;UBERON:0003929,8.45e-11,55;UBERON:0002370,3.61e-10,23;UBERON:0000974,3.61e-10,23;UBERON:0004807,3.61e-10,23;UBERON:0005058,3.61e-10,23;UBERON:0003351,3.61e-10,23;UBERON:0009113,3.61e-10,23;UBERON:0003295,3.61e-10,23;UBERON:0009722,3.61e-10,23;UBERON:0005562,3.61e-10,23;UBERON:0007690,3.61e-10,23;UBERON:0006562,1.43e-09,24;UBERON:0003408,1.43e-09,24;UBERON:0001557,1.43e-09,24;UBERON:0001042,1.43e-09,24;UBERON:0008814,1.43e-09,24;UBERON:0009145,1.43e-09,24;UBERON:0002368,2.82e-09,60;UBERON:0002106,5.90e-09,6;UBERON:0004457,5.90e-09,6;UBERON:0000042,5.90e-09,6;UBERON:0004854,5.90e-09,6;UBERON:0009034,5.90e-09,6;UBERON:0002095,5.90e-09,6;UBERON:0004782,5.90e-09,6;UBERON:0003281,5.90e-09,6;UBERON:0009664,5.90e-09,6;UBERON:0002296,5.90e-09,6;UBERON:0005602,5.90e-09,6;UBERON:0001179,5.90e-09,6;UBERON:0006293,5.90e-09,6;UBERON:0003081,9.49e-09,87;UBERON:0000072,4.71e-08,27;UBERON:0002530,5.26e-08,65;UBERON:0005911,8.22e-08,69;UBERON:0000490,8.90e-08,66|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,0.563154888606667,0.468129052643987,0.513653904676515,0,5.9920255475922,4.10875891369288,5.99597571268193,9.51633756732182,13.9912375625629,3.3123527362615,3.83920414096069,2.54633791078818,0,3.57447424323187,5.48519557191764,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,2.46025915033828,0,0,0,0,0.837063261473815,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,1.17447824240415,3.62681071005672,4.36921938885203,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.420649922702764,0.571301968807607,0,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0,0,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,4.91981978929626,0,0.867426633830679,0.913396434936424,0.230615497256059,0.301445281105245,0,0,0.247194967734374,0.433798070759735,1.76922110389975,0.970601099684455,3.09178125844551,3.87900202508178,0,0,0,0.255457055208591,0.718890747035522,2.39961092397363,1.14363204365758,0,0,0.125654352112864,0.173824320192276,0,0,0,0.712875546952214,3.23458123586242,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,1.05570674498369,0,0,0.348252166522167,0,0.398068533636986,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0.342745537829186,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,11.1786220829783,13.1694526725846,12.8171404059367,13.5916281330297,12.0588579876208,9.16653066413111,6.04161888646702,3.72911021582581,2.47105271869273,2.87536413054709,1.11642284300551,0,0.252578877947112,0,0,0.739012760666419,0.37898282354097,0.325929952884052,0,0,0.670025029767263,0.714130922658041,0.390267295715598,0.630540576424764,0.221464689648775,0.159454768657487,1.3109065177259,0.345369963731791,0.289298117163023,0,1.63171705145613,0,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,1.78238939265915,1.13230612315533,0,0.584511715822624,0.395287777946524,0,0.141940085208269,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0.291480836629851,0,8.54354403989263,1.857481811669,4.8150577116125,10.5486335922627,10.66214976224,8.69357058184786,0.849892149969277,0.419854356970974,1.10559979043539,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.774958940866387,0.675824501963113,0.352071715937262,0.13020438484395,0,0,0,2.52808896502543,1.62180172232131,4.21114924375792,2.98817892848929,1.9692936523423,2.58285761215644,2.40390899039938,2.21534290761866,2.01932899896295,2.66723823292499,1.71404514732629,1.75424185331554,1.05833025804362,2.68816875017609,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0.920650473014354,0,0.343706364687375,0,0,0,0,0.906284817968409,0,0.103787347584177,2.39414924040619,2.90247129782028,2.91728060481953,1.67690530102386,0.735374033800057,1.11123363900808,1.23621034343337,0.64183841918363,0.505394423527595,2.02783439912192,0.565879024158229,0.842773567228942,0.640251524048693,0.746661096422973,0.476293691283074,0.927074607558844,0.578727661391115,0,0.588795680537589,3.08582327146874,0.887379030796687,0.715308569841963,1.0174249164263,1.41164070622996,1.60767754994185,0.73171189149109,0.263069711437843,0.950628796921032,2.24456908663095,1.06771516311757,1.18205378850676,0.409231043169689,0.619747364743864,0.964533054905707,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,0.882365676478062,0.927471342481686|short_description=p6@Itga4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16401
|HGNC=
|MCL_coexpression_id=599
|TSSclassifier=NA
|UniProt=uniprot:E9QK91,uniprot:Q00651,uniprot:Q792F9,uniprot:Q8BQ25
|association_with_transcript=23bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end
|cluster_id=chr2:79095606..79095627,+
|description=CAGE_peak_6_at_Itga4_5end
|id=chr2:79095606..79095627,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,7.73e-11,25;CL:0000988,1.34e-09,32;CL:0002032,1.34e-09,32;CL:0000037,1.34e-09,32;CL:0000837,1.34e-09,32;CL:0000553,7.59e-09,6;CL:0000556,7.59e-09,6;CL:0000050,3.00e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.44e-09!29;UBERON:0002405!1.50e-09!70;UBERON:0005057!2.19e-09!51;UBERON:0002193!8.18e-09!48;UBERON:0002390!1.77e-08!45;UBERON:0003061!1.77e-08!45
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.39e-18,45;UBERON:0003061,7.39e-18,45;UBERON:0002193,9.19e-18,48;UBERON:0002405,9.19e-18,48;UBERON:0004177,1.11e-16,29;UBERON:0005057,1.11e-16,29;UBERON:0000077,1.04e-12,35;UBERON:0001041,8.36e-11,80;UBERON:0003929,8.45e-11,55;UBERON:0002370,3.61e-10,23;UBERON:0000974,3.61e-10,23;UBERON:0004807,3.61e-10,23;UBERON:0005058,3.61e-10,23;UBERON:0003351,3.61e-10,23;UBERON:0009113,3.61e-10,23;UBERON:0003295,3.61e-10,23;UBERON:0009722,3.61e-10,23;UBERON:0005562,3.61e-10,23;UBERON:0007690,3.61e-10,23;UBERON:0006562,1.43e-09,24;UBERON:0003408,1.43e-09,24;UBERON:0001557,1.43e-09,24;UBERON:0001042,1.43e-09,24;UBERON:0008814,1.43e-09,24;UBERON:0009145,1.43e-09,24;UBERON:0002368,2.82e-09,60;UBERON:0002106,5.90e-09,6;UBERON:0004457,5.90e-09,6;UBERON:0000042,5.90e-09,6;UBERON:0004854,5.90e-09,6;UBERON:0009034,5.90e-09,6;UBERON:0002095,5.90e-09,6;UBERON:0004782,5.90e-09,6;UBERON:0003281,5.90e-09,6;UBERON:0009664,5.90e-09,6;UBERON:0002296,5.90e-09,6;UBERON:0005602,5.90e-09,6;UBERON:0001179,5.90e-09,6;UBERON:0006293,5.90e-09,6;UBERON:0003081,9.49e-09,87;UBERON:0000072,4.71e-08,27;UBERON:0002530,5.26e-08,65;UBERON:0005911,8.22e-08,69;UBERON:0000490,8.90e-08,66
|phase1_expression=0,0,0,0,0,0,0,6.71441281896197,0.563154888606667,0.468129052643987,0.513653904676515,0,5.9920255475922,4.10875891369288,5.99597571268193,9.51633756732182,13.9912375625629,3.3123527362615,3.83920414096069,2.54633791078818,0,3.57447424323187,5.48519557191764,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,2.46025915033828,0,0,0,0,0.837063261473815,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,1.17447824240415,3.62681071005672,4.36921938885203,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.420649922702764,0.571301968807607,0,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0,0,0.372798891650601,0,0.151143120213571,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,4.91981978929626,0,0.867426633830679,0.913396434936424,0.230615497256059,0.301445281105245,0,0,0.247194967734374,0.433798070759735,1.76922110389975,0.970601099684455,3.09178125844551,3.87900202508178,0,0,0,0.255457055208591,0.718890747035522,2.39961092397363,1.14363204365758,0,0,0.125654352112864,0.173824320192276,0,0,0,0.712875546952214,3.23458123586242,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,1.05570674498369,0,0,0.348252166522167,0,0.398068533636986,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,0.102904612379284,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0.198956472041151,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0.342745537829186,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,11.1786220829783,13.1694526725846,12.8171404059367,13.5916281330297,12.0588579876208,9.16653066413111,6.04161888646702,3.72911021582581,2.47105271869273,2.87536413054709,1.11642284300551,0,0.252578877947112,0,0,0.739012760666419,0.37898282354097,0.325929952884052,0,0,0.670025029767263,0.714130922658041,0.390267295715598,0.630540576424764,0.221464689648775,0.159454768657487,1.3109065177259,0.345369963731791,0.289298117163023,0,1.63171705145613,0,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,1.78238939265915,1.13230612315533,0,0.584511715822624,0.395287777946524,0,0.141940085208269,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0.291480836629851,0,8.54354403989263,1.857481811669,4.8150577116125,10.5486335922627,10.66214976224,8.69357058184786,0.849892149969277,0.419854356970974,1.10559979043539,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0.774958940866387,0.675824501963113,0.352071715937262,0.13020438484395,0,0,0,2.52808896502543,1.62180172232131,4.21114924375792,2.98817892848929,1.9692936523423,2.58285761215644,2.40390899039938,2.21534290761866,2.01932899896295,2.66723823292499,1.71404514732629,1.75424185331554,1.05833025804362,2.68816875017609,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0.920650473014354,0,0.343706364687375,0,0,0,0,0.906284817968409,0,0.103787347584177,2.39414924040619,2.90247129782028,2.91728060481953,1.67690530102386,0.735374033800057,1.11123363900808,1.23621034343337,0.64183841918363,0.505394423527595,2.02783439912192,0.565879024158229,0.842773567228942,0.640251524048693,0.746661096422973,0.476293691283074,0.927074607558844,0.578727661391115,0,0.588795680537589,3.08582327146874,0.887379030796687,0.715308569841963,1.0174249164263,1.41164070622996,1.60767754994185,0.73171189149109,0.263069711437843,0.950628796921032,2.24456908663095,1.06771516311757,1.18205378850676,0.409231043169689,0.619747364743864,0.964533054905707,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,0.882365676478062,0.927471342481686
|short_description=p6@Itga4
}}

Revision as of 13:03, 5 August 2015

Short description:p6@Itga4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Itga4_5end
Coexpression cluster:MCL_coexpression_mm9:599
Association with transcript: 23bp_to_ENSMUST00000028395, ENSMUST00000155105, NM_010576, uc008kgo.1, uc008kgp.1, uc008kgq.1, uc008kgr.1_5end
EntrezGene:16401
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Itga4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F811.18
liver, embryo E13.CNhs10524.378-3H613.17
liver, embryo E14.CNhs10594.409-16E112.82
liver, embryo E15.CNhs10520.433-16D713.59
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G28.54
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D110.55
spleen, neonate N20.CNhs11112.824-19H110.66
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system7.39e-1845
blood island7.39e-1845
hemolymphoid system9.19e-1848
immune system9.19e-1848
hemopoietic organ1.11e-1629
immune organ1.11e-1629
mixed endoderm/mesoderm-derived structure1.04e-1235
foregut8.36e-1180
gut epithelium8.45e-1155
thymus3.61e-1023
neck3.61e-1023
respiratory system epithelium3.61e-1023
hemolymphoid system gland3.61e-1023
pharyngeal epithelium3.61e-1023
thymic region3.61e-1023
pharyngeal gland3.61e-1023
entire pharyngeal arch endoderm3.61e-1023
thymus primordium3.61e-1023
early pharyngeal endoderm3.61e-1023
pharynx1.43e-0924
gland of gut1.43e-0924
upper respiratory tract1.43e-0924
chordate pharynx1.43e-0924
pharyngeal arch system1.43e-0924
pharyngeal region of foregut1.43e-0924
endocrine gland2.82e-0960
spleen5.90e-096
cavity lining5.90e-096
serous membrane5.90e-096
gastrointestinal system mesentery5.90e-096
stomach region5.90e-096
mesentery5.90e-096
gastrointestinal system serosa5.90e-096
mesentery of stomach5.90e-096
gut mesentery5.90e-096
dorsal mesentery5.90e-096
dorsal mesogastrium5.90e-096
peritoneal cavity5.90e-096
spleen primordium5.90e-096
lateral plate mesoderm9.49e-0987
segment of respiratory tract4.71e-0827
gland5.26e-0865
endo-epithelium8.22e-0869
unilaminar epithelium8.90e-0866
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