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FFCP PHASE1:Mm9::chr2:173044380..173044432,-: Difference between revisions

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{{FFCP|EntrezGene=58203|HGNC=|MCL_coexpression_id=1264|UniProt=A2APF7,Q9QY24,A2APF8|association_with_transcript=0bp_to_ENSMUST00000029018,ENSMUST00000109116,ENSMUST00000146802,NM_001139519,NM_021394,uc008odo.2,uc008odp.2_5end|description=CAGE_peak_1_at_Zbp1_5end|id=chr2:173044380..173044432,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.51e-14!70;UBERON:0004119!8.15e-14!130;UBERON:0000925!8.15e-14!130;UBERON:0006595!8.15e-14!130;UBERON:0001007!2.63e-13!128;UBERON:0001555!2.63e-13!128;UBERON:0007026!2.63e-13!128;UBERON:0004921!8.27e-13!126;UBERON:0004185!8.27e-13!126;UBERON:0002193!2.74e-12!48;UBERON:0002390!2.74e-11!45;UBERON:0003061!2.74e-11!45;UBERON:0000490!2.08e-09!66;UBERON:0003929!4.28e-09!55;UBERON:0005057!7.45e-09!51;UBERON:0005911!8.12e-08!69;UBERON:0004923!6.58e-07!24;UBERON:0004177!8.09e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.64e-16,118;UBERON:0000925,1.64e-16,118;UBERON:0006595,1.64e-16,118;UBERON:0001007,6.13e-16,116;UBERON:0001555,6.13e-16,116;UBERON:0007026,6.13e-16,116;UBERON:0004921,2.22e-15,114;UBERON:0002193,4.13e-13,48;UBERON:0002405,4.13e-13,48;UBERON:0002390,5.07e-12,45;UBERON:0003061,5.07e-12,45;UBERON:0003929,8.59e-10,55;UBERON:0000490,9.12e-10,66;UBERON:0005911,1.26e-08,69;UBERON:0000077,2.06e-08,35;UBERON:0005409,7.92e-08,47;UBERON:0000160,8.48e-08,31;UBERON:0004177,1.01e-07,29;UBERON:0005057,1.01e-07,29;UBERON:0001041,1.64e-07,80;UBERON:0004923,3.41e-07,24;UBERON:0002530,5.79e-07,65|phase1_expression=1.92178616525753,32.4547129104606,18.1999695755814,39.9252758925016,54.0967388342055,12.255186849568,13.0823078733494,87.6747366168303,6.75785866328,14.2779361056416,2.39705155515707,2.39316476986009,119.669310221913,96.5121242705731,13.6575002344422,13.1608923803387,1.39912375625629,52.0512572841092,42.9168177185962,26.3121584114779,9.69493507722195,1.39007331681239,3.13439746966722,7.67963629408352,12.8469197397615,25.2662064210609,31.4456257196125,25.8565479223067,26.9833255628051,86.9503947671761,38.3593783433677,0,0,0,0.577703239502549,2.32728503501889,1.22501613757421,47.7126059040075,87.5095585866656,65.9639917406986,29.4115744015507,32.1031377930469,42.7249110667415,1.1330713617802,0.912392380975631,0.917733760808408,67.2856556139314,0.436050312760893,0.878744730937887,1.36100929351998,24.6376102060638,0,19.7983475148129,55.8528849348735,54.1111016619367,2.31533492432352,2.57880095944881,2.57836046138721,0,0,0,7.11573517345177,95.1545431838919,77.3913756862003,119.652829870604,92.362414942993,19.1744070731779,11.5265491596466,0,0,0.210324961351382,0.571301968807607,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,16.8112149199669,17.9104597453082,3.47837386442013,16.3480536626463,13.599426674155,5.93673510801599,18.8435161059824,12.5447528387254,7.5839986871146,0.170430322578058,0.259786004602869,0,0,1.28326477414318,0,0,1.29894624606728,0.506719730950197,1.01104889002957,27.2899472528553,77.1634893268572,10.8362761517322,0,2.43572382649713,2.53677046981664,4.6724018571313,3.88042733547826,5.15233024451669,13.1013332899218,23.8588938917854,25.6537060065464,1.13236794963186,1.98757366614354,3.87900202508178,29.8226817948995,0.585561594023094,0,76.6371165625774,1.1981512450592,1.79970819298022,1.65191295194984,0.299581278809645,1.83000241127451,0,0.347648640384553,0,0.20778804455956,0,1.93494791315601,4.35424397135326,7.07623723614289,4.20883711772948,0,0,0.360124259610698,0.150704817835715,0.748401490664606,0.768682321709099,0.749613796477831,2.84573707812917,0.215567992932842,0,0.175951124163949,0,0,1.0447564995665,0.823128545631774,0,0.702213187313235,3.86021860672073,0.852490498186778,0,0.234526059981096,0.180062061461015,0.473489471170421,0.787056926989615,0,0.232533944750408,1.07309360559848,1.28441876603886,0.16455984991348,0.32833492815819,0.972825714550269,1.46199987425332,8.56245449635098,1.47627060636409,0.210289948564127,0.411618449517138,154.635990436417,57.9146740993162,0.213288250535234,0.464473343720877,0.644337306610467,1.21010114774006,2.44615848229357,5.70676878337677,19.9302205848695,9.38784041926862,33.4275827704358,54.116160395193,41.9172787306108,52.1315257019448,23.9913235360911,12.7450414882795,0.379335801906163,0.342745537829186,0,0.203651327845314,1.55161989734101,0.771494018793504,0.379419222745544,2.36176236767363,3.1399745568275,1.85095745882701,23.7162101669719,0.333690211432188,0.589676985339609,1.12431056192427,1.42002084971952,0.482354319504834,0,4.31544206176216,5.99900339067631,12.9043864198398,40.2550978276593,69.2182162663416,33.388031023258,20.9640468696103,27.0890094418087,5.30687873499704,33.8098338004887,0,0,0.169745085775188,0,1.00503754465089,0.952174563544055,3.51240566144038,3.94087860265477,3.76489972402917,2.71073106717728,9.01248230936559,11.9152637487468,4.33947175744535,138.72798122413,373.119299099635,21.6376280128376,17.3840150171981,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:58203
|HGNC=
|MCL_coexpression_id=1264
|TSSclassifier=NA
|UniProt=uniprot:A2APF7,uniprot:Q9QY24,uniprot:A2APF8
|association_with_transcript=0bp_to_ENSMUST00000029018,ENSMUST00000109116,ENSMUST00000146802,NM_001139519,NM_021394,uc008odo.2,uc008odp.2_5end
|cluster_id=chr2:173044380..173044432,-
|description=CAGE_peak_1_at_Zbp1_5end
|id=chr2:173044380..173044432,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!1.51e-14!70;UBERON:0004119!8.15e-14!130;UBERON:0000925!8.15e-14!130;UBERON:0006595!8.15e-14!130;UBERON:0001007!2.63e-13!128;UBERON:0001555!2.63e-13!128;UBERON:0007026!2.63e-13!128;UBERON:0004921!8.27e-13!126;UBERON:0004185!8.27e-13!126;UBERON:0002193!2.74e-12!48;UBERON:0002390!2.74e-11!45;UBERON:0003061!2.74e-11!45;UBERON:0000490!2.08e-09!66;UBERON:0003929!4.28e-09!55;UBERON:0005057!7.45e-09!51;UBERON:0005911!8.12e-08!69;UBERON:0004923!6.58e-07!24;UBERON:0004177!8.09e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.64e-16,118;UBERON:0000925,1.64e-16,118;UBERON:0006595,1.64e-16,118;UBERON:0001007,6.13e-16,116;UBERON:0001555,6.13e-16,116;UBERON:0007026,6.13e-16,116;UBERON:0004921,2.22e-15,114;UBERON:0002193,4.13e-13,48;UBERON:0002405,4.13e-13,48;UBERON:0002390,5.07e-12,45;UBERON:0003061,5.07e-12,45;UBERON:0003929,8.59e-10,55;UBERON:0000490,9.12e-10,66;UBERON:0005911,1.26e-08,69;UBERON:0000077,2.06e-08,35;UBERON:0005409,7.92e-08,47;UBERON:0000160,8.48e-08,31;UBERON:0004177,1.01e-07,29;UBERON:0005057,1.01e-07,29;UBERON:0001041,1.64e-07,80;UBERON:0004923,3.41e-07,24;UBERON:0002530,5.79e-07,65
|phase1_expression=1.92178616525753,32.4547129104606,18.1999695755814,39.9252758925016,54.0967388342055,12.255186849568,13.0823078733494,87.6747366168303,6.75785866328,14.2779361056416,2.39705155515707,2.39316476986009,119.669310221913,96.5121242705731,13.6575002344422,13.1608923803387,1.39912375625629,52.0512572841092,42.9168177185962,26.3121584114779,9.69493507722195,1.39007331681239,3.13439746966722,7.67963629408352,12.8469197397615,25.2662064210609,31.4456257196125,25.8565479223067,26.9833255628051,86.9503947671761,38.3593783433677,0,0,0,0.577703239502549,2.32728503501889,1.22501613757421,47.7126059040075,87.5095585866656,65.9639917406986,29.4115744015507,32.1031377930469,42.7249110667415,1.1330713617802,0.912392380975631,0.917733760808408,67.2856556139314,0.436050312760893,0.878744730937887,1.36100929351998,24.6376102060638,0,19.7983475148129,55.8528849348735,54.1111016619367,2.31533492432352,2.57880095944881,2.57836046138721,0,0,0,7.11573517345177,95.1545431838919,77.3913756862003,119.652829870604,92.362414942993,19.1744070731779,11.5265491596466,0,0,0.210324961351382,0.571301968807607,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,16.8112149199669,17.9104597453082,3.47837386442013,16.3480536626463,13.599426674155,5.93673510801599,18.8435161059824,12.5447528387254,7.5839986871146,0.170430322578058,0.259786004602869,0,0,1.28326477414318,0,0,1.29894624606728,0.506719730950197,1.01104889002957,27.2899472528553,77.1634893268572,10.8362761517322,0,2.43572382649713,2.53677046981664,4.6724018571313,3.88042733547826,5.15233024451669,13.1013332899218,23.8588938917854,25.6537060065464,1.13236794963186,1.98757366614354,3.87900202508178,29.8226817948995,0.585561594023094,0,76.6371165625774,1.1981512450592,1.79970819298022,1.65191295194984,0.299581278809645,1.83000241127451,0,0.347648640384553,0,0.20778804455956,0,1.93494791315601,4.35424397135326,7.07623723614289,4.20883711772948,0,0,0.360124259610698,0.150704817835715,0.748401490664606,0.768682321709099,0.749613796477831,2.84573707812917,0.215567992932842,0,0.175951124163949,0,0,1.0447564995665,0.823128545631774,0,0.702213187313235,3.86021860672073,0.852490498186778,0,0.234526059981096,0.180062061461015,0.473489471170421,0.787056926989615,0,0.232533944750408,1.07309360559848,1.28441876603886,0.16455984991348,0.32833492815819,0.972825714550269,1.46199987425332,8.56245449635098,1.47627060636409,0.210289948564127,0.411618449517138,154.635990436417,57.9146740993162,0.213288250535234,0.464473343720877,0.644337306610467,1.21010114774006,2.44615848229357,5.70676878337677,19.9302205848695,9.38784041926862,33.4275827704358,54.116160395193,41.9172787306108,52.1315257019448,23.9913235360911,12.7450414882795,0.379335801906163,0.342745537829186,0,0.203651327845314,1.55161989734101,0.771494018793504,0.379419222745544,2.36176236767363,3.1399745568275,1.85095745882701,23.7162101669719,0.333690211432188,0.589676985339609,1.12431056192427,1.42002084971952,0.482354319504834,0,4.31544206176216,5.99900339067631,12.9043864198398,40.2550978276593,69.2182162663416,33.388031023258,20.9640468696103,27.0890094418087,5.30687873499704,33.8098338004887,0,0,0.169745085775188,0,1.00503754465089,0.952174563544055,3.51240566144038,3.94087860265477,3.76489972402917,2.71073106717728,9.01248230936559,11.9152637487468,4.33947175744535,138.72798122413,373.119299099635,21.6376280128376,17.3840150171981,0.642202359951168,0.234423373184406,0,1.00988370881749,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,0.642642632843614,4.40014264145633,0.534196811001766,1.30309567482861,14.5173708215831,3.98235415019888,0.242780636154981,0,0,0.885905678642318,0.922305443831782,7.75284879504663,0.727067458955011,1.06949213515416,3.79244109522979,4.21674434299995,1.03135543248187,14.6389030474129,0,0.129358683782755,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,1.8267896946876,19.477751769288,4.44847348814022,1.98475558249466,8.07942639413252,1.61464426695906,1.93001359770099,0.716234064018819,1.80554989719567,27.6906794798358,0.556275906031529,29.9024041396242,4.54051109519089,11.4820606969221,4.1441060541032,13.8061169998235,15.0993594316305,4.07948231985253,6.43776680688827,4.69879910935041,12.4107180341965,0,0.406638934253697,0.648032044930808,0,3.05707589244649,3.10187996685088,8.18269211680826,4.4498510137285,7.2584385043404,8.07741107013003,0,0.149516546043979,0.66183396182839,0.583353565032143,0.774958940866387,0.675824501963113,0.704143431874524,0.781226309063701,0.419437377702843,0.241584120826006,0.288030006257865,61.6221685224948,3.04087822935246,6.88163413004343,16.6298653411578,11.6367352183863,19.470772768564,27.5247579400729,23.7780138751069,30.5928343342887,22.70962838319,30.2478555410522,52.0425083150278,37.1377708731672,39.5043929373703,3.17422537061296,0,0,0,8.30715254338419,28.1523713176773,47.0699674366871,4.50173596066038,3.00943262421218,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0.20961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|short_description=p1@Zbp1
}}

Revision as of 16:02, 4 August 2015

Short description:p1@Zbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zbp1_5end
Coexpression cluster:MCL_coexpression_mm9:1264
Association with transcript: 0bp_to_ENSMUST00000029018, ENSMUST00000109116, ENSMUST00000146802, NM_001139519, NM_021394, uc008odo.2, uc008odp.2_5end
EntrezGene:58203
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Zbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I532.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I454.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.08
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E987.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4119.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E896.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A252.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A442.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.85
GP2+ M cell, pool1.CNhs13228.11845-124H925.27
GP2+ M cell, pool2.CNhs13231.11846-124I131.45
GP2+ M cell, pool3.CNhs13240.11847-124I225.86
Ileum epithelium, pool1.CNhs13199.10252-104B926.98
Ileum epithelium, pool2.CNhs13232.10253-104C186.95
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C838.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G847.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H187.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H365.96
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G929.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H442.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B767.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.80
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I955.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A154.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D195.15
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C777.39
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7119.65
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D292.36
Mouse Microglia, donor1.CNhs12629.11718-123C819.17
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D916.81
Mouse Schwann, donor2.CNhs12573.11746-123F917.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.29
accessory axillary lymph node, adult.CNhs10475.1063-29H977.16
adrenal gland, adult.CNhs10508.49-24D710.84
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I35.15
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H123.86
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H776.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I3154.64
intestine, adult.CNhs10496.178-9A357.91
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E99.39
intestine, neonate N06.CNhs11102.688-20B833.43
intestine, neonate N07.CNhs11095.720-20F254.12
intestine, neonate N10.CNhs11098.755-23A541.92
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E323.99
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B223.72
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G212.90
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H269.22
liver, neonate N10.CNhs11115.751-24B933.39
liver, neonate N20.CNhs11220.823-25A320.96
liver, neonate N25.CNhs11198.1368-26H127.09
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B133.81
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1138.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1373.12
mammary gland, adult lactating day02.CNhs10480.595-22B621.64
mammary gland, adult pregnant day19.CNhs10476.588-5H217.38
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I719.48
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C38.08
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I127.69
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G229.90
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F211.48
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H113.81
spleen, neonate N25.CNhs11099.1354-25G315.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A98.18
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B561.62
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C516.63
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G419.47
thymus, neonate N02.CNhs11181.1541-43F827.52
thymus, neonate N03.CNhs11137.2104-43C723.78
thymus, neonate N06.CNhs11197.681-26C430.59
thymus, neonate N07.CNhs11211.713-19D322.71
thymus, neonate N10.CNhs11194.748-24E430.25
thymus, neonate N20.CNhs11186.820-7A252.04
thymus, neonate N25.CNhs11125.1362-25G737.14
thymus, neonate N30.CNhs11132.1393-42G239.50
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.31
uterus, adult pregnant day19.CNhs10497.590-15F528.15
uterus, adult.CNhs10509.92-27E547.07
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.64e-16118
endoderm1.64e-16118
presumptive endoderm1.64e-16118
digestive system6.13e-16116
digestive tract6.13e-16116
primitive gut6.13e-16116
subdivision of digestive tract2.22e-15114
hemolymphoid system4.13e-1348
immune system4.13e-1348
hematopoietic system5.07e-1245
blood island5.07e-1245
gut epithelium8.59e-1055
unilaminar epithelium9.12e-1066
endo-epithelium1.26e-0869
mixed endoderm/mesoderm-derived structure2.06e-0835
gastrointestinal system7.92e-0847
intestine8.48e-0831
hemopoietic organ1.01e-0729
immune organ1.01e-0729
foregut1.64e-0780
organ component layer3.41e-0724
gland5.79e-0765
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