FFCP PHASE1:Mm9::chr17:32561084..32561098,-: Difference between revisions
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{{FFCP|EntrezGene=57757|HGNC=|MCL_coexpression_id=33|UniProt=Q8VCS0|association_with_transcript=13bp_to_ENSMUST00000114455,uc008bxb.2,uc008bxc.2,uc008bxd.1_5end|description=CAGE_peak_4_at_Pglyrp2_5end|id=chr17:32561084..32561098,-|ontology_enrichment_celltype=CL:0000838!3.84e-12!12;CL:0000084!3.03e-11!11;CL:0000827!3.03e-11!11;CL:0000542!6.71e-11!13;CL:0000051!6.71e-11!13;CL:0002031!1.44e-09!25;CL:0000791!2.77e-09!9;CL:0000789!2.77e-09!9;CL:0002420!2.77e-09!9;CL:0002419!2.77e-09!9;CL:0000790!2.77e-09!9;CL:0000988!2.59e-08!32;CL:0002032!2.59e-08!32;CL:0000037!2.59e-08!32;CL:0000566!2.59e-08!32;CL:0000837!2.59e-08!32;CL:0000624!2.84e-08!8;CL:0000738!1.93e-07!17;CL:0002087!1.93e-07!17|ontology_enrichment_celltype_v019_2=CL:0002031,3.33e-15,25;CL:0000838,1.02e-14,12;CL:0000988,1.40e-14,32;CL:0002032,1.40e-14,32;CL:0000037,1.40e-14,32;CL:0000837,1.40e-14,32;CL:0000542,1.91e-13,13;CL:0000051,1.91e-13,13;CL:0000084,5.38e-13,11;CL:0000827,5.38e-13,11;CL:0000738,7.49e-10,17;CL:0002087,7.49e-10,17;CL:0000791,2.25e-09,9;CL:0000789,2.25e-09,9;CL:0002420,2.25e-09,9;CL:0002419,2.25e-09,9;CL:0000790,2.25e-09,9;CL:0000553,4.37e-09,6;CL:0000556,4.37e-09,6;CL:0002320,5.29e-09,46;CL:0000134,5.29e-09,46;CL:0000624,1.38e-07,8;CL:0000219,3.87e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.42e-21!29;UBERON:0002193!3.69e-19!48;UBERON:0003408!1.93e-17!24;UBERON:0002390!9.79e-17!45;UBERON:0003061!9.79e-17!45;UBERON:0002370!1.24e-16!23;UBERON:0000974!1.24e-16!23;UBERON:0004807!1.24e-16!23;UBERON:0005058!1.24e-16!23;UBERON:0003351!1.24e-16!23;UBERON:0009113!1.24e-16!23;UBERON:0003295!1.24e-16!23;UBERON:0009722!1.24e-16!23;UBERON:0005562!1.24e-16!23;UBERON:0007690!1.24e-16!23;UBERON:0006562!1.25e-15!24;UBERON:0001557!1.25e-15!24;UBERON:0001042!1.25e-15!24;UBERON:0008814!1.25e-15!24;UBERON:0009145!1.25e-15!24;UBERON:0000072!4.41e-13!27;UBERON:0001004!1.10e-11!42;UBERON:0000065!5.11e-11!41;UBERON:0002405!7.17e-11!70;UBERON:0000063!1.26e-10!35;UBERON:0005057!1.81e-09!51;UBERON:0003081!1.31e-08!88;UBERON:0001007!9.17e-08!128;UBERON:0001555!9.17e-08!128;UBERON:0007026!9.17e-08!128;UBERON:0004119!1.97e-07!130;UBERON:0000925!1.97e-07!130;UBERON:0006595!1.97e-07!130;UBERON:0004921!5.72e-07!126;UBERON:0004185!5.72e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.30e-27,24;UBERON:0002193,1.13e-26,48;UBERON:0002405,1.13e-26,48;UBERON:0002370,5.13e-26,23;UBERON:0000974,5.13e-26,23;UBERON:0004807,5.13e-26,23;UBERON:0005058,5.13e-26,23;UBERON:0003351,5.13e-26,23;UBERON:0009113,5.13e-26,23;UBERON:0003295,5.13e-26,23;UBERON:0009722,5.13e-26,23;UBERON:0005562,5.13e-26,23;UBERON:0007690,5.13e-26,23;UBERON:0004177,9.28e-25,29;UBERON:0005057,9.28e-25,29;UBERON:0006562,9.42e-25,24;UBERON:0001557,9.42e-25,24;UBERON:0001042,9.42e-25,24;UBERON:0008814,9.42e-25,24;UBERON:0009145,9.42e-25,24;UBERON:0002390,4.25e-24,45;UBERON:0003061,4.25e-24,45;UBERON:0000072,1.59e-21,27;UBERON:0000077,1.08e-19,35;UBERON:0007811,6.70e-17,36;UBERON:0001004,7.51e-14,42;UBERON:0000153,2.00e-13,43;UBERON:0000065,9.90e-13,41;UBERON:0003081,1.17e-09,87;UBERON:0002384,5.29e-09,46;UBERON:0003929,1.86e-08,55;UBERON:0002530,2.15e-08,65;UBERON:0002368,2.00e-07,60;UBERON:0001041,7.41e-07,80|phase1_expression=0,0,0.454999239389536,0,0,0,0,17.9481419583791,0.563154888606667,1.17032263160997,0.68487187290202,0.0797721589953364,22.2560948910567,23.2538270434533,1.99865857089398,1.61980213911861,0,7.72882305127682,7.40417941470989,5.09267582157636,0.340173160604279,6.056748023254,5.22399578277871,1.59992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,10.1550699881588,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,17.6077760880077,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0.161766849947409,0,0,3.72783522436244,0,0,0.255457055208591,1.7972268675888,0,1.01656181658452,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,1.65209391491899,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0.637819074629948,0.983179888294428,0.863424909329478,0.433947175744535,0,0,0,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0,2.9048049735635,0.206386867963223,0.740778109478847,0.376736914009382,0.956859594047176,2.51655990527175,4.24946074984638,5.03825228365169,4.28419918793714,0,0,0,0,0,0,0,0,0,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,9.16432249821717,3.24360344464263,2.87590680061516,4.54722880422283,4.11761400035207,5.16571522431289,7.69250876927801,6.64602872285597,8.27924889574811,6.32516495236499,8.26774718122092,8.86866714731747,7.79315917286669,8.88264456579924,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843|short_description=p4@Pglyrp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57757 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VCS0 | |||
|association_with_transcript=13bp_to_ENSMUST00000114455,uc008bxb.2,uc008bxc.2,uc008bxd.1_5end | |||
|cluster_id=chr17:32561084..32561098,- | |||
|description=CAGE_peak_4_at_Pglyrp2_5end | |||
|id=chr17:32561084..32561098,- | |||
|ontology_enrichment_celltype=CL:0000838!3.84e-12!12;CL:0000084!3.03e-11!11;CL:0000827!3.03e-11!11;CL:0000542!6.71e-11!13;CL:0000051!6.71e-11!13;CL:0002031!1.44e-09!25;CL:0000791!2.77e-09!9;CL:0000789!2.77e-09!9;CL:0002420!2.77e-09!9;CL:0002419!2.77e-09!9;CL:0000790!2.77e-09!9;CL:0000988!2.59e-08!32;CL:0002032!2.59e-08!32;CL:0000037!2.59e-08!32;CL:0000566!2.59e-08!32;CL:0000837!2.59e-08!32;CL:0000624!2.84e-08!8;CL:0000738!1.93e-07!17;CL:0002087!1.93e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.33e-15,25;CL:0000838,1.02e-14,12;CL:0000988,1.40e-14,32;CL:0002032,1.40e-14,32;CL:0000037,1.40e-14,32;CL:0000837,1.40e-14,32;CL:0000542,1.91e-13,13;CL:0000051,1.91e-13,13;CL:0000084,5.38e-13,11;CL:0000827,5.38e-13,11;CL:0000738,7.49e-10,17;CL:0002087,7.49e-10,17;CL:0000791,2.25e-09,9;CL:0000789,2.25e-09,9;CL:0002420,2.25e-09,9;CL:0002419,2.25e-09,9;CL:0000790,2.25e-09,9;CL:0000553,4.37e-09,6;CL:0000556,4.37e-09,6;CL:0002320,5.29e-09,46;CL:0000134,5.29e-09,46;CL:0000624,1.38e-07,8;CL:0000219,3.87e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.42e-21!29;UBERON:0002193!3.69e-19!48;UBERON:0003408!1.93e-17!24;UBERON:0002390!9.79e-17!45;UBERON:0003061!9.79e-17!45;UBERON:0002370!1.24e-16!23;UBERON:0000974!1.24e-16!23;UBERON:0004807!1.24e-16!23;UBERON:0005058!1.24e-16!23;UBERON:0003351!1.24e-16!23;UBERON:0009113!1.24e-16!23;UBERON:0003295!1.24e-16!23;UBERON:0009722!1.24e-16!23;UBERON:0005562!1.24e-16!23;UBERON:0007690!1.24e-16!23;UBERON:0006562!1.25e-15!24;UBERON:0001557!1.25e-15!24;UBERON:0001042!1.25e-15!24;UBERON:0008814!1.25e-15!24;UBERON:0009145!1.25e-15!24;UBERON:0000072!4.41e-13!27;UBERON:0001004!1.10e-11!42;UBERON:0000065!5.11e-11!41;UBERON:0002405!7.17e-11!70;UBERON:0000063!1.26e-10!35;UBERON:0005057!1.81e-09!51;UBERON:0003081!1.31e-08!88;UBERON:0001007!9.17e-08!128;UBERON:0001555!9.17e-08!128;UBERON:0007026!9.17e-08!128;UBERON:0004119!1.97e-07!130;UBERON:0000925!1.97e-07!130;UBERON:0006595!1.97e-07!130;UBERON:0004921!5.72e-07!126;UBERON:0004185!5.72e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.30e-27,24;UBERON:0002193,1.13e-26,48;UBERON:0002405,1.13e-26,48;UBERON:0002370,5.13e-26,23;UBERON:0000974,5.13e-26,23;UBERON:0004807,5.13e-26,23;UBERON:0005058,5.13e-26,23;UBERON:0003351,5.13e-26,23;UBERON:0009113,5.13e-26,23;UBERON:0003295,5.13e-26,23;UBERON:0009722,5.13e-26,23;UBERON:0005562,5.13e-26,23;UBERON:0007690,5.13e-26,23;UBERON:0004177,9.28e-25,29;UBERON:0005057,9.28e-25,29;UBERON:0006562,9.42e-25,24;UBERON:0001557,9.42e-25,24;UBERON:0001042,9.42e-25,24;UBERON:0008814,9.42e-25,24;UBERON:0009145,9.42e-25,24;UBERON:0002390,4.25e-24,45;UBERON:0003061,4.25e-24,45;UBERON:0000072,1.59e-21,27;UBERON:0000077,1.08e-19,35;UBERON:0007811,6.70e-17,36;UBERON:0001004,7.51e-14,42;UBERON:0000153,2.00e-13,43;UBERON:0000065,9.90e-13,41;UBERON:0003081,1.17e-09,87;UBERON:0002384,5.29e-09,46;UBERON:0003929,1.86e-08,55;UBERON:0002530,2.15e-08,65;UBERON:0002368,2.00e-07,60;UBERON:0001041,7.41e-07,80 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,17.9481419583791,0.563154888606667,1.17032263160997,0.68487187290202,0.0797721589953364,22.2560948910567,23.2538270434533,1.99865857089398,1.61980213911861,0,7.72882305127682,7.40417941470989,5.09267582157636,0.340173160604279,6.056748023254,5.22399578277871,1.59992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,10.1550699881588,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,17.6077760880077,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0.161766849947409,0,0,3.72783522436244,0,0,0.255457055208591,1.7972268675888,0,1.01656181658452,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,1.65209391491899,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.923765950833023,0,0,0,0,0,0,0,0,0,0.637819074629948,0.983179888294428,0.863424909329478,0.433947175744535,0,0,0,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0,2.9048049735635,0.206386867963223,0.740778109478847,0.376736914009382,0.956859594047176,2.51655990527175,4.24946074984638,5.03825228365169,4.28419918793714,0,0,0,0,0,0,0,0,0,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,9.16432249821717,3.24360344464263,2.87590680061516,4.54722880422283,4.11761400035207,5.16571522431289,7.69250876927801,6.64602872285597,8.27924889574811,6.32516495236499,8.26774718122092,8.86866714731747,7.79315917286669,8.88264456579924,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843 | |||
|short_description=p4@Pglyrp2 | |||
}} |
Revision as of 15:18, 4 August 2015
Short description: | p4@Pglyrp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pglyrp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 13bp_to_ENSMUST00000114455, uc008bxb.2, uc008bxc.2, uc008bxd.1_5end |
EntrezGene: | 57757 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.33e-15 | 25 |
lymphoid lineage restricted progenitor cell | 1.02e-14 | 12 |
hematopoietic cell | 1.40e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.40e-14 | 32 |
hematopoietic stem cell | 1.40e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.40e-14 | 32 |
lymphocyte | 1.91e-13 | 13 |
common lymphoid progenitor | 1.91e-13 | 13 |
T cell | 5.38e-13 | 11 |
pro-T cell | 5.38e-13 | 11 |
leukocyte | 7.49e-10 | 17 |
nongranular leukocyte | 7.49e-10 | 17 |
mature alpha-beta T cell | 2.25e-09 | 9 |
alpha-beta T cell | 2.25e-09 | 9 |
immature T cell | 2.25e-09 | 9 |
mature T cell | 2.25e-09 | 9 |
immature alpha-beta T cell | 2.25e-09 | 9 |
megakaryocyte progenitor cell | 4.37e-09 | 6 |
megakaryocyte | 4.37e-09 | 6 |
connective tissue cell | 5.29e-09 | 46 |
mesenchymal cell | 5.29e-09 | 46 |
CD4-positive, alpha-beta T cell | 1.38e-07 | 8 |
motile cell | 3.87e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 1.30e-27 | 24 |
hemolymphoid system | 1.13e-26 | 48 |
immune system | 1.13e-26 | 48 |
thymus | 5.13e-26 | 23 |
neck | 5.13e-26 | 23 |
respiratory system epithelium | 5.13e-26 | 23 |
hemolymphoid system gland | 5.13e-26 | 23 |
pharyngeal epithelium | 5.13e-26 | 23 |
thymic region | 5.13e-26 | 23 |
pharyngeal gland | 5.13e-26 | 23 |
entire pharyngeal arch endoderm | 5.13e-26 | 23 |
thymus primordium | 5.13e-26 | 23 |
early pharyngeal endoderm | 5.13e-26 | 23 |
hemopoietic organ | 9.28e-25 | 29 |
immune organ | 9.28e-25 | 29 |
pharynx | 9.42e-25 | 24 |
upper respiratory tract | 9.42e-25 | 24 |
chordate pharynx | 9.42e-25 | 24 |
pharyngeal arch system | 9.42e-25 | 24 |
pharyngeal region of foregut | 9.42e-25 | 24 |
hematopoietic system | 4.25e-24 | 45 |
blood island | 4.25e-24 | 45 |
segment of respiratory tract | 1.59e-21 | 27 |
mixed endoderm/mesoderm-derived structure | 1.08e-19 | 35 |
craniocervical region | 6.70e-17 | 36 |
respiratory system | 7.51e-14 | 42 |
anterior region of body | 2.00e-13 | 43 |
respiratory tract | 9.90e-13 | 41 |
lateral plate mesoderm | 1.17e-09 | 87 |
connective tissue | 5.29e-09 | 46 |
gut epithelium | 1.86e-08 | 55 |
gland | 2.15e-08 | 65 |
endocrine gland | 2.00e-07 | 60 |
foregut | 7.41e-07 | 80 |