FFCP PHASE1:Hg19::chr1:206288186..206288203,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440712 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25341 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000484045_5end | |||
|coexpression_cluster_id=C3638 | |||
|description=CAGE_peak_1_at_C1orf186_5end | |||
|id=chr1:206288186..206288203,- | |||
|ontology_enrichment_celltype=CL:1000507!2.91e-19!12;CL:1000494!2.91e-19!12;CL:1000497!1.26e-17!18;CL:0002518!1.26e-17!18;CL:1000449!7.19e-17!16;CL:0002149!2.30e-11!6;CL:0002255!2.30e-11!6;CL:0002681!3.26e-11!13;CL:0002584!3.26e-11!13;CL:0000066!6.20e-09!254;CL:0000239!1.60e-08!3;CL:1000615!1.60e-08!3;CL:0002306!1.60e-08!3;CL:0000064!4.66e-08!3;CL:0005012!4.66e-08!3;CL:0000067!4.66e-08!3;CL:0002304!4.66e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002149;7.16e-28;6!CL:0002255;7.16e-28;6!CL:1000497;1.74e-17;17!CL:0002518;1.74e-17;17!CL:1000507;8.35e-16;10!CL:1000494;8.35e-16;10!CL:1000449;8.73e-15;15!CL:0000159;3.10e-14;2!CL:0000239;1.26e-09;3!CL:1000615;1.26e-09;3!CL:0002306;1.26e-09;3!CL:0000064;2.30e-09;3!CL:0000067;2.30e-09;3!CL:0005012;2.30e-09;3!CL:0002304;2.30e-09;3!CL:0002681;1.00e-08;12!CL:0002584;1.00e-08;12!CL:0000313;2.70e-08;1!CL:0000342;1.22e-07;1!CL:0002565;1.22e-07;1!CL:0000319;1.22e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.39e-28,6;CL:0002255,7.39e-28,6;CL:1000497,1.76e-17,17;CL:0002518,1.76e-17,17;CL:1000507,6.60e-16,10;CL:1000494,6.60e-16,10;CL:1000449,8.12e-15,15;CL:0000159,2.02e-14,2;CL:0000066,3.11e-11,253;CL:0000239,9.72e-10,3;CL:1000615,9.72e-10,3;CL:0002306,9.72e-10,3;CL:0000064,2.85e-09,3;CL:0000067,2.85e-09,3;CL:0005012,2.85e-09,3;CL:0002304,2.85e-09,3;CL:0002681,8.88e-09,12;CL:0002584,8.88e-09,12;CL:0000313,2.70e-08,1;CL:0000319,7.97e-08,1;CL:0000342,1.44e-07,1;CL:0002565,1.44e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.82e-14;2!UBERON:0005795;6.71e-11;10!UBERON:0005754;3.09e-08;1!UBERON:0003104;3.92e-07;31 | |||
|ontology_enrichment_disease=DOID:299!1.43e-14!25;DOID:3001!2.30e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;7.16e-28;6!DOID:299;6.65e-25;25!DOID:120;7.01e-15;27!DOID:4468;1.10e-14;2!DOID:193;8.99e-14;29!DOID:2152;2.70e-08;1!DOID:3030;1.22e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.39e-28,6;DOID:299,5.36e-25,25;DOID:120,7.22e-15,27;DOID:4468,1.18e-14,2;DOID:193,9.24e-14,29;DOID:305,1.96e-09,106;DOID:2152,2.70e-08,1;DOID:3030,7.97e-08,1;DOID:0050687,2.34e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003887!1.73e-26!21;UBERON:0001008!5.88e-23!45;UBERON:0004876!8.45e-22!20;UBERON:0006554!1.99e-21!44;UBERON:0000080!3.78e-21!18;UBERON:0002120!3.78e-21!18;UBERON:0004875!3.78e-21!18;UBERON:0005721!3.78e-21!18;UBERON:0005754!3.78e-21!18;UBERON:0007297!3.78e-21!18;UBERON:0000058!5.65e-21!26;UBERON:0002113!2.81e-20!27;UBERON:0003918!2.81e-20!27;UBERON:0005095!2.81e-20!27;UBERON:0007687!2.81e-20!27;UBERON:0005172!1.23e-19!55;UBERON:0005173!1.23e-19!55;UBERON:0009773!2.91e-19!12;UBERON:0001231!2.91e-19!12;UBERON:0004810!2.91e-19!12;UBERON:0006555!5.91e-19!17;UBERON:0005103!5.91e-19!17;UBERON:0000083!5.91e-19!17;UBERON:0009201!5.91e-19!17;UBERON:0004819!5.91e-19!17;UBERON:0006553!5.91e-19!17;UBERON:0003074!5.91e-19!17;UBERON:0003060!5.91e-19!17;UBERON:0000489!1.83e-18!32;UBERON:0003064!4.64e-17!37;UBERON:0002417!5.00e-17!61;UBERON:0000916!5.00e-17!61;UBERON:0004211!7.19e-17!16;UBERON:0001285!7.19e-17!16;UBERON:0007684!7.19e-17!16;UBERON:0003220!7.19e-17!16;UBERON:0004208!7.19e-17!16;UBERON:0003886!1.54e-12!63;UBERON:0004175!3.95e-12!25;UBERON:0001225!3.26e-11!13;UBERON:0008987!3.26e-11!13;UBERON:0002553!1.04e-10!70;UBERON:0003133!1.31e-10!48;UBERON:0000488!2.74e-10!4;UBERON:0005177!3.31e-10!107;UBERON:0005156!4.27e-10!59;UBERON:0000990!4.27e-10!59;UBERON:0000466!5.50e-09!126;UBERON:0006947!5.54e-09!3;UBERON:0004054!5.54e-09!3;UBERON:0001851!8.16e-09!16;UBERON:0006853!1.60e-08!3;UBERON:0007685!1.60e-08!3;UBERON:0004134!1.60e-08!3;UBERON:0000353!3.32e-08!17;UBERON:0001778!4.66e-08!3;UBERON:0001775!4.66e-08!3;UBERON:0009569!9.62e-08!113;UBERON:0003975!1.33e-07!22;UBERON:0004177!2.16e-07!7;UBERON:0007625!3.06e-07!11;UBERON:0002106!3.27e-07!3;UBERON:0004854!3.27e-07!3;UBERON:0009034!3.27e-07!3;UBERON:0002095!3.27e-07!3;UBERON:0004782!3.27e-07!3;UBERON:0003281!3.27e-07!3;UBERON:0009664!3.27e-07!3;UBERON:0002296!3.27e-07!3;UBERON:0005602!3.27e-07!3;UBERON:0001179!3.27e-07!3;UBERON:0006293!3.27e-07!3;UBERON:0003103!4.53e-07!69;UBERON:0003134!6.23e-07!37;UBERON:0000474!6.23e-07!37;UBERON:0000464!7.51e-07!104;UBERON:0002203!7.90e-07!6;UBERON:0001768!7.90e-07!6;UBERON:0005904!8.56e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.15e-21;3!UBERON:0004054;7.15e-21;3!UBERON:0004175;2.45e-19;21!UBERON:0002113;6.66e-16;24!UBERON:0011143;6.66e-16;24!UBERON:0004211;8.35e-16;10!UBERON:0009773;8.35e-16;10!UBERON:0001231;8.35e-16;10!UBERON:0004810;8.35e-16;10!UBERON:0005904;8.49e-16;4!UBERON:0006554;8.90e-16;30!UBERON:0001008;8.90e-16;30!UBERON:0006555;8.73e-15;15!UBERON:0004819;8.73e-15;15!UBERON:0001285;8.73e-15;15!UBERON:0007684;8.73e-15;15!UBERON:0000488;8.81e-15;4!UBERON:0000489;5.72e-13;29!UBERON:0002203;4.94e-10;6!UBERON:0001768;4.94e-10;6!UBERON:0002200;4.94e-10;6!UBERON:0000995;1.03e-09;17!UBERON:0006853;1.26e-09;3!UBERON:0007685;1.26e-09;3!UBERON:0004134;1.26e-09;3!UBERON:0001778;2.30e-09;3!UBERON:0001775;2.30e-09;3!UBERON:0003975;3.69e-09;18!UBERON:0001225;1.00e-08;12!UBERON:0008987;1.00e-08;12!UBERON:0005172;1.89e-08;52!UBERON:0005173;1.89e-08;52!UBERON:0004911;2.70e-08;1!UBERON:0000998;3.09e-08;1!UBERON:0006868;3.09e-08;1!UBERON:0001000;3.80e-08;1!UBERON:0005352;3.80e-08;1!UBERON:0001301;6.30e-08;1!UBERON:0003133;8.34e-08;44!UBERON:0002506;1.22e-07;1!UBERON:0001769;1.22e-07;1!UBERON:0001851;5.33e-07;15!UBERON:0000353;5.33e-07;15!UBERON:0002417;5.50e-07;58!UBERON:0000916;5.50e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.57e-23,26;UBERON:0003918,4.57e-23,26;UBERON:0011143,4.57e-23,26;UBERON:0005095,4.57e-23,26;UBERON:0007687,4.57e-23,26;UBERON:0006947,6.07e-21,3;UBERON:0004054,6.07e-21,3;UBERON:0005172,1.29e-20,54;UBERON:0005173,1.29e-20,54;UBERON:0000489,4.51e-19,31;UBERON:0006555,8.44e-19,16;UBERON:0004819,8.44e-19,16;UBERON:0002417,2.79e-18,60;UBERON:0000916,2.79e-18,60;UBERON:0004175,4.51e-16,25;UBERON:0004810,6.60e-16,10;UBERON:0005904,7.51e-16,4;UBERON:0004211,8.12e-15,15;UBERON:0009773,8.12e-15,15;UBERON:0001231,8.12e-15,15;UBERON:0001285,8.12e-15,15;UBERON:0007684,8.12e-15,15;UBERON:0004208,8.12e-15,15;UBERON:0000488,1.26e-14,4;UBERON:0006554,1.49e-14,47;UBERON:0001008,3.30e-14,48;UBERON:0003887,2.29e-13,12;UBERON:0000080,8.08e-12,9;UBERON:0002120,8.08e-12,9;UBERON:0004875,8.08e-12,9;UBERON:0005721,8.08e-12,9;UBERON:0005754,8.08e-12,9;UBERON:0007297,8.08e-12,9;UBERON:0002203,6.25e-10,6;UBERON:0001768,6.25e-10,6;UBERON:0002200,6.25e-10,6;UBERON:0003133,6.47e-10,48;UBERON:0005177,9.40e-10,101;UBERON:0006853,9.72e-10,3;UBERON:0007685,9.72e-10,3;UBERON:0004134,9.72e-10,3;UBERON:0004876,1.08e-09,11;UBERON:0001778,2.85e-09,3;UBERON:0001775,2.85e-09,3;UBERON:0001225,8.88e-09,12;UBERON:0008987,8.88e-09,12;UBERON:0009569,1.56e-08,112;UBERON:0000058,1.75e-08,19;UBERON:0004911,2.70e-08,1;UBERON:0000998,2.89e-08,1;UBERON:0006868,2.89e-08,1;UBERON:0001000,3.80e-08,1;UBERON:0005352,3.80e-08,1;UBERON:0001301,5.70e-08,1;UBERON:0000995,8.25e-08,21;UBERON:0005156,8.57e-08,59;UBERON:0000990,8.57e-08,59;UBERON:0003103,8.97e-08,68;UBERON:0005103,9.26e-08,8;UBERON:0000083,9.26e-08,8;UBERON:0009201,9.26e-08,8;UBERON:0006553,9.26e-08,8;UBERON:0003074,9.26e-08,8;UBERON:0003060,9.26e-08,8;UBERON:0002506,1.44e-07,1;UBERON:0001769,1.44e-07,1;UBERON:0005795,1.92e-07,22;UBERON:0003975,1.92e-07,22;UBERON:0001851,4.84e-07,15;UBERON:0000353,4.84e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,0.443458794925128,1.05401742831751,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,1.20097467208968,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0.902399225814824,0.847168708148562,0.784349769176855,1.46139224653261,1.05551628892876,0,0,1.0795795805107,0,1.62567862526312,0.501689773854853,4.33289664176565,1.66215201785745,0.895499018888713,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,1.29151611801369,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.369254416383208,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,6.54094000036884,9.14103725691227,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,6.70793484843964,0,0,0,0,0,0,0,0,0,9.10750547295337,0,6.94238953340524,0.489961987071888,0,2.79562669187248,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44227865152393,1.97798060114799,2.2243169471881,0,0.169346664131569,0,0,0,0,0,0,0,0,0,4.09789677955831,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.627944742804112,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0,0,9.73790215439137,2.2910686854405,3.41227024230752,5.7332336338646,19.2391342692203,0,1.5849330247695,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.179650404213174,0,0.488965776731466,0,0.665756774185513,0,0 | |||
|short_description=p1@C1orf186 | |||
}} |
Revision as of 23:45, 10 January 2014
Short description: | p1@C1orf186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf186_5end |
Coexpression cluster: | C3638_serous_seminal_ductus_clear_endometrial_endometrioid_epididymis |
Association with transcript: | 13bp_to_ENST00000484045_5end |
EntrezGene: | C1orf186 |
HGNC: | 25341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.39e-28 | 6 |
stromal cell of endometrium | 7.39e-28 | 6 |
kidney cell | 1.76e-17 | 17 |
kidney epithelial cell | 1.76e-17 | 17 |
kidney tubule cell | 6.60e-16 | 10 |
nephron tubule epithelial cell | 6.60e-16 | 10 |
epithelial cell of nephron | 8.12e-15 | 15 |
seromucus secreting cell | 2.02e-14 | 2 |
epithelial cell | 3.11e-11 | 253 |
brush border epithelial cell | 9.72e-10 | 3 |
kidney cortex tubule cell | 9.72e-10 | 3 |
epithelial cell of proximal tubule | 9.72e-10 | 3 |
ciliated cell | 2.85e-09 | 3 |
ciliated epithelial cell | 2.85e-09 | 3 |
multi-ciliated epithelial cell | 2.85e-09 | 3 |
non-pigmented ciliary epithelial cell | 2.85e-09 | 3 |
kidney cortical cell | 8.88e-09 | 12 |
renal cortical epithelial cell | 8.88e-09 | 12 |
serous secreting cell | 2.70e-08 | 1 |
mucus secreting cell | 7.97e-08 | 1 |
pigment cell (sensu Vertebrata) | 1.44e-07 | 1 |
iris pigment epithelial cell | 1.44e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.39e-28 | 6 |
adenocarcinoma | 5.36e-25 | 25 |
female reproductive organ cancer | 7.22e-15 | 27 |
clear cell adenocarcinoma | 1.18e-14 | 2 |
reproductive organ cancer | 9.24e-14 | 29 |
carcinoma | 1.96e-09 | 106 |
ovary epithelial cancer | 2.70e-08 | 1 |