FFCP PHASE1:Hg19::chr12:71031281..71031292,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!1.60e-48!24;CL:0000115!3.54e-38!35;CL:0000071!1.03e-32!18;CL:0002546!1.03e-32!18;CL:0002078!5.98e-29!44;CL:1000413!3.55e-25!9;CL:0000213!8.38e-21!57;CL:0000215!8.38e-21!57;CL:0005020!1.03e-17!6;CL:0002138!1.03e-17!6;CL:0005022!1.03e-17!6;CL:0002544!1.81e-17!6;CL:0002618!4.26e-09!3;CL:0002543!1.32e-07!6;CL:0000222!1.38e-07!119;CL:0002545!9.09e-07!2;CL:0000076!9.60e-07!62 | |ontology_enrichment_celltype=CL:0002139!1.60e-48!24;CL:0000115!3.54e-38!35;CL:0000071!1.03e-32!18;CL:0002546!1.03e-32!18;CL:0002078!5.98e-29!44;CL:1000413!3.55e-25!9;CL:0000213!8.38e-21!57;CL:0000215!8.38e-21!57;CL:0005020!1.03e-17!6;CL:0002138!1.03e-17!6;CL:0005022!1.03e-17!6;CL:0002544!1.81e-17!6;CL:0002618!4.26e-09!3;CL:0002543!1.32e-07!6;CL:0000222!1.38e-07!119;CL:0002545!9.09e-07!2;CL:0000076!9.60e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.07e-69;24!CL:0002138;8.72e-59;6!CL:0000115;6.74e-55;36!CL:0002078;3.94e-37;45!CL:0000071;6.68e-28;18!CL:1000413;2.39e-25;9!CL:0000213;1.41e-24;58!CL:0000215;1.41e-24;58!CL:0002544;8.89e-22;6!CL:0002188;2.00e-12;5!CL:1000746;3.88e-09;7!CL:1000612;3.88e-09;7 | |ontology_enrichment_celltype_v019=CL:0002139;1.07e-69;24!CL:0002138;8.72e-59;6!CL:0000115;6.74e-55;36!CL:0002078;3.94e-37;45!CL:0000071;6.68e-28;18!CL:1000413;2.39e-25;9!CL:0000213;1.41e-24;58!CL:0000215;1.41e-24;58!CL:0002544;8.89e-22;6!CL:0002188;2.00e-12;5!CL:1000746;3.88e-09;7!CL:1000612;3.88e-09;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.76e-70,24;CL:0000115,8.13e-65,36;CL:0005020,8.76e-59,6;CL:0002138,8.76e-59,6;CL:0005022,8.76e-59,6;CL:0002078,1.16e-51,45;CL:0000213,7.48e-40,58;CL:0000215,7.48e-40,58;CL:0000071,5.29e-28,18;CL:0002546,5.29e-28,18;CL:1000413,2.11e-25,9;CL:0002544,6.70e-22,6;CL:0000222,1.68e-18,121;CL:0002188,2.67e-12,5;CL:1000746,4.76e-09,7;CL:1000612,4.76e-09,7;CL:0002321,3.61e-08,250;CL:0000066,3.94e-08,253;CL:0000076,7.87e-08,63 | |||
|ontology_enrichment_development_v019=CL:0005022;8.72e-59;6!CL:0002546;6.68e-28;18!CL:0000222;4.43e-07;121 | |ontology_enrichment_development_v019=CL:0005022;8.72e-59;6!CL:0002546;6.68e-28;18!CL:0000222;4.43e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;5.55e-16;1!DOID:4549;5.55e-16;1!DOID:5861;5.55e-16;1!DOID:6496;5.55e-16;1 | |ontology_enrichment_disease_v019=DOID:3371;5.55e-16;1!DOID:4549;5.55e-16;1!DOID:5861;5.55e-16;1!DOID:6496;5.55e-16;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,5.56e-16,1;DOID:4549,5.56e-16,1;DOID:5861,5.56e-16,1;DOID:6496,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.03e-32!18;UBERON:0004638!1.03e-32!18;UBERON:0004852!1.03e-32!18;UBERON:0000487!5.35e-26!22;UBERON:0003915!3.55e-25!9;UBERON:0004700!3.55e-25!9;UBERON:0001917!3.55e-25!9;UBERON:0006914!2.24e-22!25;UBERON:0000055!6.90e-21!69;UBERON:0002049!2.60e-17!79;UBERON:0007798!2.60e-17!79;UBERON:0007023!3.86e-16!115;UBERON:0004111!2.10e-14!241;UBERON:0001981!1.75e-13!60;UBERON:0007500!1.75e-13!60;UBERON:0004537!1.75e-13!60;UBERON:0006965!1.75e-13!60;UBERON:0001473!4.63e-13!8;UBERON:0004536!4.63e-13!8;UBERON:0006558!4.63e-13!8;UBERON:0000477!1.88e-12!286;UBERON:0001009!5.03e-12!113;UBERON:0004535!1.70e-11!110;UBERON:0004872!2.16e-11!84;UBERON:0000025!1.08e-10!194;UBERON:0002465!2.87e-10!10;UBERON:0003914!5.12e-09!118;UBERON:0005800!9.09e-07!2;UBERON:0001515!9.09e-07!2 | |ontology_enrichment_uberon=UBERON:0001986!1.03e-32!18;UBERON:0004638!1.03e-32!18;UBERON:0004852!1.03e-32!18;UBERON:0000487!5.35e-26!22;UBERON:0003915!3.55e-25!9;UBERON:0004700!3.55e-25!9;UBERON:0001917!3.55e-25!9;UBERON:0006914!2.24e-22!25;UBERON:0000055!6.90e-21!69;UBERON:0002049!2.60e-17!79;UBERON:0007798!2.60e-17!79;UBERON:0007023!3.86e-16!115;UBERON:0004111!2.10e-14!241;UBERON:0001981!1.75e-13!60;UBERON:0007500!1.75e-13!60;UBERON:0004537!1.75e-13!60;UBERON:0006965!1.75e-13!60;UBERON:0001473!4.63e-13!8;UBERON:0004536!4.63e-13!8;UBERON:0006558!4.63e-13!8;UBERON:0000477!1.88e-12!286;UBERON:0001009!5.03e-12!113;UBERON:0004535!1.70e-11!110;UBERON:0004872!2.16e-11!84;UBERON:0000025!1.08e-10!194;UBERON:0002465!2.87e-10!10;UBERON:0003914!5.12e-09!118;UBERON:0005800!9.09e-07!2;UBERON:0001515!9.09e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.67e-44;8!UBERON:0004536;3.67e-44;8!UBERON:0006558;3.67e-44;8!UBERON:0002465;2.24e-35;10!UBERON:0004638;6.68e-28;18!UBERON:0001986;6.68e-28;18!UBERON:0004852;6.68e-28;18!UBERON:0003915;2.39e-25;9!UBERON:0004700;2.39e-25;9!UBERON:0001917;2.39e-25;9!UBERON:0000487;8.29e-23;22!UBERON:0006914;4.71e-20;25!UBERON:0000055;1.00e-16;65!UBERON:0000490;1.01e-14;33!UBERON:0002405;3.65e-13;27!UBERON:0000074;3.88e-09;7!UBERON:0001229;3.88e-09;7!UBERON:0007500;2.13e-08;56!UBERON:0001981;2.13e-08;56!UBERON:0004537;2.13e-08;56!UBERON:0002049;2.79e-08;75!UBERON:0007798;2.79e-08;75!UBERON:0002193;9.87e-08;42!UBERON:0004535;5.18e-07;109 | |ontology_enrichment_uberon_v019=UBERON:0001473;3.67e-44;8!UBERON:0004536;3.67e-44;8!UBERON:0006558;3.67e-44;8!UBERON:0002465;2.24e-35;10!UBERON:0004638;6.68e-28;18!UBERON:0001986;6.68e-28;18!UBERON:0004852;6.68e-28;18!UBERON:0003915;2.39e-25;9!UBERON:0004700;2.39e-25;9!UBERON:0001917;2.39e-25;9!UBERON:0000487;8.29e-23;22!UBERON:0006914;4.71e-20;25!UBERON:0000055;1.00e-16;65!UBERON:0000490;1.01e-14;33!UBERON:0002405;3.65e-13;27!UBERON:0000074;3.88e-09;7!UBERON:0001229;3.88e-09;7!UBERON:0007500;2.13e-08;56!UBERON:0001981;2.13e-08;56!UBERON:0004537;2.13e-08;56!UBERON:0002049;2.79e-08;75!UBERON:0007798;2.79e-08;75!UBERON:0002193;9.87e-08;42!UBERON:0004535;5.18e-07;109 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.69e-44,8;UBERON:0004536,3.69e-44,8;UBERON:0006558,3.69e-44,8;UBERON:0002465,2.25e-35,10;UBERON:0004638,5.29e-28,18;UBERON:0001986,5.29e-28,18;UBERON:0004852,5.29e-28,18;UBERON:0003915,2.11e-25,9;UBERON:0004700,2.11e-25,9;UBERON:0001917,2.11e-25,9;UBERON:0000055,4.76e-24,68;UBERON:0000487,6.85e-23,22;UBERON:0002049,7.85e-21,78;UBERON:0007798,7.85e-21,78;UBERON:0006914,3.99e-20,25;UBERON:0004535,1.36e-14,109;UBERON:0001009,3.59e-14,112;UBERON:0010532,4.76e-09,7;UBERON:0000074,4.76e-09,7;UBERON:0001229,4.76e-09,7;UBERON:0001230,4.76e-09,7;UBERON:0003220,4.76e-09,7;UBERON:0005749,4.76e-09,7;UBERON:0004199,4.76e-09,7;UBERON:0004209,4.76e-09,7;UBERON:0004198,4.76e-09,7;UBERON:0004111,1.31e-08,240;UBERON:0007500,2.21e-08,59;UBERON:0001981,2.21e-08,59;UBERON:0004537,2.21e-08,59;UBERON:0006965,2.21e-08,59;UBERON:0005103,5.00e-08,8;UBERON:0000083,5.00e-08,8;UBERON:0009201,5.00e-08,8;UBERON:0006553,5.00e-08,8;UBERON:0003074,5.00e-08,8;UBERON:0003060,5.00e-08,8;UBERON:0000080,3.14e-07,9;UBERON:0002120,3.14e-07,9;UBERON:0004875,3.14e-07,9;UBERON:0005721,3.14e-07,9;UBERON:0005754,3.14e-07,9;UBERON:0007297,3.14e-07,9;UBERON:0003914,4.99e-07,117 | |||
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| ||
|short_description=p12@PTPRB | |short_description=p12@PTPRB | ||
}} | }} |
Revision as of 16:39, 20 November 2012
Short description: | p12@PTPRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_PTPRB_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -61bp_to_ENST00000334414, ENST00000552253, NM_001109754_5end |
EntrezGene: | PTPRB |
HGNC: | 9665 |
UniProt: | P23467Q86VA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.76e-70 | 24 |
endothelial cell | 8.13e-65 | 36 |
lymphangioblast | 8.76e-59 | 6 |
endothelial cell of lymphatic vessel | 8.76e-59 | 6 |
vascular lymphangioblast | 8.76e-59 | 6 |
meso-epithelial cell | 1.16e-51 | 45 |
lining cell | 7.48e-40 | 58 |
barrier cell | 7.48e-40 | 58 |
blood vessel endothelial cell | 5.29e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.29e-28 | 18 |
endothelial cell of artery | 2.11e-25 | 9 |
aortic endothelial cell | 6.70e-22 | 6 |
mesodermal cell | 1.68e-18 | 121 |
glomerular endothelial cell | 2.67e-12 | 5 |
glomerular cell | 4.76e-09 | 7 |
kidney corpuscule cell | 4.76e-09 | 7 |
embryonic cell | 3.61e-08 | 250 |
epithelial cell | 3.94e-08 | 253 |
squamous epithelial cell | 7.87e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.56e-16 | 1 |
extraosseous chondrosarcoma | 5.56e-16 | 1 |
myxoid chondrosarcoma | 5.56e-16 | 1 |
extraskeletal myxoid chondrosarcoma | 5.56e-16 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.