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DOID:5861

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Name:myxoid chondrosarcoma
Namespace:FANTOM
Xrefs:
links:

NCI:C4303
SNOMEDCT_2010_1_31:189881008
SNOMEDCT_2010_1_31:75622000

UMLS_CUI:C0334551
Synonyms: " Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008]
"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3371(chondrosarcoma)



Children


is a:DOID:6496 (extraskeletal myxoid chondrosarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Mouse (Mus musculus)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5861 (myxoid chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr3:2141851..2141858,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141851..2141858, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589345..152589353,-#_6ef67aad4781bdf0faef4ef7a3601b2fp63@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr20:36848135..36848142,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr20:36848135..36848142, -
5.42e-195FFCP PHASE1:Hg19::chr9:13006722..13006729,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:13006722..13006729, -
5.42e-195FFCP PHASE1:Hg19::chr4:139817573..139817580,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:139817573..139817580, -
5.42e-195FFCP PHASE2:Hg19::chr3:157230582..157230593,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157230582..157230593, +
5.42e-195FFCP PHASE2:Hg19::chr1:192407901..192407907,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192407901..192407907, -
5.42e-195FFCP PHASE2:Hg19::chr19:41281630..41281644,+#_6ef67aad4781bdf0faef4ef7a3601b2fp6@RAB4B
5.42e-195FFCP PHASE1:Hg19::chr13:23027835..23027846,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027835..23027846, +
5.42e-195FFCP PHASE1:Hg19::chr15:96181408..96181419,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181408..96181419, -
5.42e-195FFCP PHASE1:Hg19::chr6:150735014..150735021,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735014..150735021, -
5.42e-195FFCP PHASE2:Hg19::chr4:169935453..169935460,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935453..169935460, -
5.42e-195FFCP PHASE2:Hg19::chr3:2140234..2140235,+#_6ef67aad4781bdf0faef4ef7a3601b2fp36@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:228806586..228806591,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228806586..228806591, +
5.42e-195FFCP PHASE2:Hg19::chr13:23733790..23733815,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733790..23733815, -
5.42e-195FFCP PHASE1:Hg19::chrX:135338329..135338337,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338329..135338337, -
5.42e-195FFCP PHASE2:Hg19::chr4:72897846..72897853,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@NPFFR2
5.42e-195FFCP PHASE1:Hg19::chr7:79999046..79999051,+#_6ef67aad4781bdf0faef4ef7a3601b2fp41@CD36
5.42e-195FFCP PHASE1:Hg19::chr3:1577628..1577634,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577628..1577634, -
5.42e-195FFCP PHASE1:Hg19::chr1:197873492..197873502,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:197873492..197873502, -
5.42e-195FFCP PHASE2:Hg19::chr11:30257128..30257133,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr11:30257128..30257133, -
5.42e-195FFCP PHASE2:Hg19::chr2:188420470..188420480,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:188420470..188420480, +
5.42e-195FFCP PHASE2:Hg19::chr4:145124273..145124279,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:145124273..145124279, +
5.42e-195FFCP PHASE1:Hg19::chr7:18439468..18439477,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439468..18439477, +
5.42e-195FFCP PHASE2:Hg19::chr6:142987388..142987398,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142987388..142987398, -
5.42e-195FFCP PHASE1:Hg19::chr5:109694595..109694599,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:109694595..109694599, +
5.42e-195FFCP PHASE1:Hg19::chr3:157221979..157222025,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157221979..157222025, -
5.42e-195FFCP PHASE2:Hg19::chr18:74961699..74961708,+#_6ef67aad4781bdf0faef4ef7a3601b2fp5@GALR1
5.42e-195FFCP PHASE2:Hg19::chr6:152792957..152792960,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152792957..152792960, -
5.42e-195FFCP PHASE1:Hg19::chr17:46178195..46178202,-#_6ef67aad4781bdf0faef4ef7a3601b2fp12@CBX1
5.42e-195FFCP PHASE2:Hg19::chr14:83319766..83319776,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:83319766..83319776, -
5.42e-195FFCP PHASE2:Hg19::chr9:12848028..12848033,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:12848028..12848033, -
5.42e-195FFCP PHASE1:Hg19::chr9:18504821..18504825,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:18504821..18504825, +
5.42e-195FFCP PHASE2:Hg19::chr3:177555440..177555446,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:177555440..177555446, -
5.42e-195FFCP PHASE2:Hg19::chr1:197886803..197886812,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@LHX9
5.42e-195FFCP PHASE1:Hg19::chr3:2140149..2140157,+#_6ef67aad4781bdf0faef4ef7a3601b2fp25@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:228783266..228783269,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228783266..228783269, -
5.42e-195FFCP PHASE2:Hg19::chr19:56047661..56047668,-#_6ef67aad4781bdf0faef4ef7a3601b2fp4@SBK2
5.42e-195FFCP PHASE1:Hg19::chr13:23733607..23733611,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733607..23733611, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141813..2141822,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141813..2141822, -
5.42e-195FFCP PHASE1:Hg19::chr2:74780643..74780673,-#_6ef67aad4781bdf0faef4ef7a3601b2fp30@LOXL3
5.42e-195FFCP PHASE2:Hg19::chr18:22251696..22251702,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:22251696..22251702, -
5.42e-195FFCP PHASE2:Hg19::chr10:33244066..33244083,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:33244066..33244083, -
5.42e-195FFCP PHASE1:Hg19::chr6:152589291..152589303,-#_6ef67aad4781bdf0faef4ef7a3601b2fp38@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr3:2141993..2142006,+#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:154942376..154942386,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:154942376..154942386, -
5.42e-195FFCP PHASE1:Hg19::chr1:172009977..172009985,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:172009977..172009985, +
5.42e-195FFCP PHASE2:Hg19::chr6:152590052..152590068,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152590052..152590068, -
5.42e-195FFCP PHASE2:Hg19::chr2:175614951..175614956,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:175614951..175614956, -
5.42e-195FFCP PHASE2:Hg19::chr3:1577559..1577577,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577559..1577577, -
5.42e-195FFCP PHASE1:Hg19::chr13:23169005..23169009,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23169005..23169009, +
5.42e-195FFCP PHASE2:Hg19::chr2:206927691..206927699,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:206927691..206927699, -
5.42e-195FFCP PHASE1:Hg19::chr2:53436150..53436154,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:53436150..53436154, -
5.42e-195FFCP PHASE1:Hg19::chr21:38309134..38309135,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr21:38309134..38309135, -
5.42e-195FFCP PHASE1:Hg19::chr1:43637641..43637648,-#_6ef67aad4781bdf0faef4ef7a3601b2fp16@EBNA1BP2
5.42e-195FFCP PHASE1:Hg19::chr18:74535888..74535894,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:74535888..74535894, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589245..152589256,-#_6ef67aad4781bdf0faef4ef7a3601b2fp53@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr5:128083931..128083952,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:128083931..128083952, +
5.42e-195FFCP PHASE1:Hg19::chr3:170537826..170537835,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:170537826..170537835, +
5.42e-195FFCP PHASE2:Hg19::chr12:89917192..89917200,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:89917192..89917200, -
5.42e-195FFCP PHASE1:Hg19::chrX:591202..591211,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:591202..591211, -
5.42e-195FFCP PHASE2:Hg19::chr5:33361438..33361453,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:33361438..33361453, -
5.42e-195FFCP PHASE2:Hg19::chr2:190023542..190023552,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:190023542..190023552, -
5.42e-195FFCP PHASE2:Hg19::chr3:2139856..2139863,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2139856..2139863, +
5.42e-195FFCP PHASE2:Hg19::chr6:150740842..150740854,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150740842..150740854, +
5.42e-195FFCP PHASE1:Hg19::chr6:152589452..152589462,-#_6ef67aad4781bdf0faef4ef7a3601b2fp43@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr3:157231406..157231414,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157231406..157231414, -
5.42e-195FFCP PHASE1:Hg19::chr1:192444852..192444861,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192444852..192444861, +
5.42e-195FFCP PHASE2:Hg19::chr12:79920595..79920605,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:79920595..79920605, -
5.42e-195FFCP PHASE2:Hg19::chr14:87689429..87689432,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:87689429..87689432, -
5.42e-195FFCP PHASE1:Hg19::chr10:54786954..54786965,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:54786954..54786965, -
5.42e-195FFCP PHASE2:Hg19::chr1:197890538..197890548,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:197890538..197890548, +
5.42e-195FFCP PHASE1:Hg19::chr1:145473297..145473306,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@AB464458
5.42e-195FFCP PHASE1:Hg19::chr13:23734279..23734283,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23734279..23734283, +
5.42e-195FFCP PHASE1:Hg19::chr3:2141949..2141956,+#_6ef67aad4781bdf0faef4ef7a3601b2fp21@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:154942206..154942211,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:154942206..154942211, -
5.42e-195FFCP PHASE2:Hg19::chr15:96181433..96181441,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181433..96181441, -
5.42e-195FFCP PHASE2:Hg19::chrX:135338397..135338402,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338397..135338402, -
5.42e-195FFCP PHASE1:Hg19::chr8:107074457..107074458,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr8:107074457..107074458, +
5.42e-195FFCP PHASE2:Hg19::chr3:163194047..163194081,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:163194047..163194081, -
5.42e-195FFCP PHASE1:Hg19::chr3:196296715..196296737,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:196296715..196296737, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141746..2141758,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141746..2141758, -
5.42e-195FFCP PHASE2:Hg19::chr3:2141785..2141802,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141785..2141802, -
5.42e-195FFCP PHASE2:Hg19::chr3:2141862..2141887,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141862..2141887, -
5.42e-195FFCP PHASE1:Hg19::chr3:30570717..30570723,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:30570717..30570723, -
5.42e-195FFCP PHASE1:Hg19::chr3:127441501..127441504,-#_6ef67aad4781bdf0faef4ef7a3601b2fp59@MGLL
5.42e-195FFCP PHASE2:Hg19::chr3:99680705..99680734,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:99680705..99680734, +
5.42e-195FFCP PHASE1:Hg19::chr4:139817600..139817609,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:139817600..139817609, -
5.42e-195FFCP PHASE2:Hg19::chr3:157230599..157230604,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157230599..157230604, +
5.42e-195FFCP PHASE1:Hg19::chr13:23027882..23027888,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027882..23027888, +
5.42e-195FFCP PHASE1:Hg19::chr15:96181421..96181428,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181421..96181428, -
5.42e-195FFCP PHASE1:Hg19::chr6:150735319..150735330,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735319..150735330, +
5.42e-195FFCP PHASE2:Hg19::chr4:169935479..169935481,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935479..169935481, -
5.42e-195FFCP PHASE1:Hg19::chr6:152592460..152592465,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152592460..152592465, -
5.42e-195FFCP PHASE1:Hg19::chr2:175629357..175629367,-#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CHRNA1
5.42e-195FFCP PHASE1:Hg19::chr10:63700017..63700022,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:63700017..63700022, +
5.42e-195FFCP PHASE2:Hg19::chr7:94540075..94540082,+#_6ef67aad4781bdf0faef4ef7a3601b2fp21@PPP1R9A
5.42e-195FFCP PHASE2:Hg19::chr1:198595872..198595878,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:198595872..198595878, +
5.42e-195FFCP PHASE1:Hg19::chr7:18439510..18439521,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439510..18439521, +
5.42e-195FFCP PHASE2:Hg19::chr6:142993137..142993142,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142993137..142993142, +

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