FFCP PHASE1:Hg19::chr19:48994431..48994444,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.02e-09!5;CL:1000507!4.19e-09!12;CL:1000494!4.19e-09!12 | |ontology_enrichment_celltype=CL:0002322!1.02e-09!5;CL:1000507!4.19e-09!12;CL:1000494!4.19e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.73e-20;10!CL:1000494;4.73e-20;10!CL:0002322;1.10e-14;5!CL:1000449;2.49e-13;15!CL:0000239;5.27e-12;3!CL:1000615;5.27e-12;3!CL:0002306;5.27e-12;3!CL:1000497;9.59e-12;17!CL:0002518;9.59e-12;17!CL:0002681;4.58e-11;12!CL:0002584;4.58e-11;12!CL:0000148;1.33e-07;10!CL:0000075;2.92e-07;27 | |ontology_enrichment_celltype_v019=CL:1000507;4.73e-20;10!CL:1000494;4.73e-20;10!CL:0002322;1.10e-14;5!CL:1000449;2.49e-13;15!CL:0000239;5.27e-12;3!CL:1000615;5.27e-12;3!CL:0002306;5.27e-12;3!CL:1000497;9.59e-12;17!CL:0002518;9.59e-12;17!CL:0002681;4.58e-11;12!CL:0002584;4.58e-11;12!CL:0000148;1.33e-07;10!CL:0000075;2.92e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.04e-20,10;CL:1000494,4.04e-20,10;CL:0002322,1.15e-14,5;CL:1000449,2.24e-13,15;CL:0000239,5.13e-12,3;CL:1000615,5.13e-12,3;CL:0002306,5.13e-12,3;CL:1000497,8.76e-12,17;CL:0002518,8.76e-12,17;CL:0002681,4.35e-11,12;CL:0002584,4.35e-11,12;CL:0000148,1.46e-07,10;CL:0000541,1.46e-07,10;CL:0000075,3.06e-07,27;CL:0000066,4.57e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.53e-09;1 | |ontology_enrichment_development_v019=UBERON:0008425;3.53e-09;1 | ||
|ontology_enrichment_disease=DOID:5093!1.49e-08!4;DOID:1612!1.49e-08!4 | |ontology_enrichment_disease=DOID:5093!1.49e-08!4;DOID:1612!1.49e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.66e-32;4!DOID:1612;1.66e-32;4!DOID:6193;8.31e-10;1!DOID:12603;3.53e-09;1!DOID:299;4.34e-08;25 | |ontology_enrichment_disease_v019=DOID:5093;1.66e-32;4!DOID:1612;1.66e-32;4!DOID:6193;8.31e-10;1!DOID:12603;3.53e-09;1!DOID:299;4.34e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.02e-32,4;DOID:1612,1.02e-32,4;DOID:6193,8.68e-10,1;DOID:12603,5.28e-09,1;DOID:299,3.94e-08,25;DOID:7,5.83e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000489!8.75e-10!32;UBERON:0009773!4.19e-09!12;UBERON:0001231!4.19e-09!12;UBERON:0004810!4.19e-09!12;UBERON:0002113!2.53e-08!27;UBERON:0003918!2.53e-08!27;UBERON:0005095!2.53e-08!27;UBERON:0007687!2.53e-08!27;UBERON:0005177!6.00e-08!107;UBERON:0003887!7.41e-08!21;UBERON:0005172!3.06e-07!55;UBERON:0005173!3.06e-07!55;UBERON:0009569!5.36e-07!113;UBERON:0000464!5.61e-07!104;UBERON:0006554!9.39e-07!44 | |ontology_enrichment_uberon=UBERON:0000489!8.75e-10!32;UBERON:0009773!4.19e-09!12;UBERON:0001231!4.19e-09!12;UBERON:0004810!4.19e-09!12;UBERON:0002113!2.53e-08!27;UBERON:0003918!2.53e-08!27;UBERON:0005095!2.53e-08!27;UBERON:0007687!2.53e-08!27;UBERON:0005177!6.00e-08!107;UBERON:0003887!7.41e-08!21;UBERON:0005172!3.06e-07!55;UBERON:0005173!3.06e-07!55;UBERON:0009569!5.36e-07!113;UBERON:0000464!5.61e-07!104;UBERON:0006554!9.39e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.73e-20;10!UBERON:0009773;4.73e-20;10!UBERON:0001231;4.73e-20;10!UBERON:0004810;4.73e-20;10!UBERON:0006555;2.49e-13;15!UBERON:0004819;2.49e-13;15!UBERON:0001285;2.49e-13;15!UBERON:0007684;2.49e-13;15!UBERON:0000310;3.68e-13;10!UBERON:0006853;5.27e-12;3!UBERON:0007685;5.27e-12;3!UBERON:0004134;5.27e-12;3!UBERON:0001443;5.56e-12;11!UBERON:0002113;1.19e-11;24!UBERON:0011143;1.19e-11;24!UBERON:0001225;4.58e-11;12!UBERON:0008987;4.58e-11;12!UBERON:0000489;1.47e-09;29!UBERON:0006554;3.18e-09;30!UBERON:0001008;3.18e-09;30!UBERON:0001851;7.01e-09;15!UBERON:0000353;7.01e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;4.73e-20;10!UBERON:0009773;4.73e-20;10!UBERON:0001231;4.73e-20;10!UBERON:0004810;4.73e-20;10!UBERON:0006555;2.49e-13;15!UBERON:0004819;2.49e-13;15!UBERON:0001285;2.49e-13;15!UBERON:0007684;2.49e-13;15!UBERON:0000310;3.68e-13;10!UBERON:0006853;5.27e-12;3!UBERON:0007685;5.27e-12;3!UBERON:0004134;5.27e-12;3!UBERON:0001443;5.56e-12;11!UBERON:0002113;1.19e-11;24!UBERON:0011143;1.19e-11;24!UBERON:0001225;4.58e-11;12!UBERON:0008987;4.58e-11;12!UBERON:0000489;1.47e-09;29!UBERON:0006554;3.18e-09;30!UBERON:0001008;3.18e-09;30!UBERON:0001851;7.01e-09;15!UBERON:0000353;7.01e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.04e-20,10;UBERON:0004211,2.24e-13,15;UBERON:0009773,2.24e-13,15;UBERON:0001231,2.24e-13,15;UBERON:0001285,2.24e-13,15;UBERON:0007684,2.24e-13,15;UBERON:0004208,2.24e-13,15;UBERON:0000310,3.04e-13,10;UBERON:0006555,1.57e-12,16;UBERON:0004819,1.57e-12,16;UBERON:0001443,4.69e-12,11;UBERON:0006853,5.13e-12,3;UBERON:0007685,5.13e-12,3;UBERON:0004134,5.13e-12,3;UBERON:0001225,4.35e-11,12;UBERON:0008987,4.35e-11,12;UBERON:0002113,9.59e-11,26;UBERON:0003918,9.59e-11,26;UBERON:0011143,9.59e-11,26;UBERON:0005095,9.59e-11,26;UBERON:0007687,9.59e-11,26;UBERON:0009569,7.67e-10,112;UBERON:0000489,6.23e-09,31;UBERON:0001851,6.73e-09,15;UBERON:0000353,6.73e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.975789649036763,1.32529768321485,1.51052125730374,1.0366105501537,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0,0,0,0,0.811512834825538,0,0,0,0,7.11183958163348,5.15091697256924,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,3.15839729035188,1.46329140498388,0.784349769176855,1.46139224653261,0.633309773357254,0,0,0,0,0.541892875087706,0,3.56826782263054,6.64860807142979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,1.11481905075431,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.808815160325942,0,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,1.31189999994294,0,0,3.30529745380596,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.784250137270958,1.1747511088309,0,0,0,0,0,0,0,0.353830258013357,0,0.889563386041866,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0,0,10.7607037767781,0.293977192243133,0,0,10.319161948297,0,0,0,0,0,0,0,0,0,0.586654148204409,0.400794101257669,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0.803765742325096,2.47570985875021,0.83088067605837,0,0,0,0,0.472834243795189,0.262272940674991,0,0,0,0,0,2.28841683889275,0,0,0,0,0,0,0,0,0,0,0,1.53978154095896,0.704815022316672,0.213574825135389,0,0,0.496166021811951,0.197611631897944,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924205329202706,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0,0,1.16241425368125,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.196300467230486,4.26712737437943,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.0644578879735772,0.0999411559249289,0,3.88184358887261,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.203977659483963,0.26721740526556,0.18378979906969,0.752122617877125,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0,0.217716747896961,0,0.336760265072938,0.358611026963382,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr19:48994431..48994444,- | |short_description=p@chr19:48994431..48994444,- | ||
}} | }} |
Revision as of 12:12, 19 November 2012
Short description: | p@chr19:48994431..48994444, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:48994431..48994444, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.04e-20 | 10 |
nephron tubule epithelial cell | 4.04e-20 | 10 |
embryonic stem cell | 1.15e-14 | 5 |
epithelial cell of nephron | 2.24e-13 | 15 |
brush border epithelial cell | 5.13e-12 | 3 |
kidney cortex tubule cell | 5.13e-12 | 3 |
epithelial cell of proximal tubule | 5.13e-12 | 3 |
kidney cell | 8.76e-12 | 17 |
kidney epithelial cell | 8.76e-12 | 17 |
kidney cortical cell | 4.35e-11 | 12 |
renal cortical epithelial cell | 4.35e-11 | 12 |
melanocyte | 1.46e-07 | 10 |
melanoblast | 1.46e-07 | 10 |
columnar/cuboidal epithelial cell | 3.06e-07 | 27 |
epithelial cell | 4.57e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 4.04e-20 | 10 |
nephron epithelium | 2.24e-13 | 15 |
renal tubule | 2.24e-13 | 15 |
nephron tubule | 2.24e-13 | 15 |
nephron | 2.24e-13 | 15 |
uriniferous tubule | 2.24e-13 | 15 |
nephrogenic mesenchyme | 2.24e-13 | 15 |
breast | 3.04e-13 | 10 |
excretory tube | 1.57e-12 | 16 |
kidney epithelium | 1.57e-12 | 16 |
chest | 4.69e-12 | 11 |
renal cortex tubule | 5.13e-12 | 3 |
region of nephron tubule | 5.13e-12 | 3 |
proximal tubule | 5.13e-12 | 3 |
cortex of kidney | 4.35e-11 | 12 |
renal parenchyma | 4.35e-11 | 12 |
kidney | 9.59e-11 | 26 |
kidney mesenchyme | 9.59e-11 | 26 |
upper urinary tract | 9.59e-11 | 26 |
kidney rudiment | 9.59e-11 | 26 |
kidney field | 9.59e-11 | 26 |
subdivision of trunk | 7.67e-10 | 112 |
cavitated compound organ | 6.23e-09 | 31 |
cortex | 6.73e-09 | 15 |
parenchyma | 6.73e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.02e-32 | 4 |
breast cancer | 1.02e-32 | 4 |
epithelioid sarcoma | 8.68e-10 | 1 |
acute leukemia | 5.28e-09 | 1 |
adenocarcinoma | 3.94e-08 | 25 |
disease of anatomical entity | 5.83e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.