FFCP PHASE1:Hg19::chr11:75201791..75201815,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81544 | |EntrezGene=81544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28804 | |HGNC=28804 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000529721,uc001owo.3_5end | |association_with_transcript=0bp_to_ENST00000529721,uc001owo.3_5end | ||
|cluster_id=chr11:75201791..75201815,- | |||
|description=CAGE_peak_3_at_GDPD5_5end | |description=CAGE_peak_3_at_GDPD5_5end | ||
|id=chr11:75201791..75201815,- | |id=chr11:75201791..75201815,- | ||
|ontology_enrichment_celltype=CL:0000066!2.86e-32!254;CL:1000497!8.93e-13!18;CL:0002518!8.93e-13!18;CL:1000449!1.35e-12!16;CL:0000076!1.23e-11!62;CL:0002321!1.40e-11!248;CL:0000220!2.64e-11!246;CL:0000077!7.84e-11!19;CL:1000507!2.16e-10!12;CL:1000494!2.16e-10!12;CL:0002681!3.46e-09!13;CL:0002584!3.46e-09!13;CL:0000243!3.06e-08!15;CL:0000125!3.06e-08!15;CL:0000030!3.06e-08!15;CL:0000339!3.06e-08!15;CL:0000213!6.77e-08!57;CL:0000215!6.77e-08!57;CL:0000548!1.19e-07!679;CL:0000004!1.19e-07!679;CL:0000255!1.19e-07!679;CL:0000012!1.92e-07!682;CL:1000612!4.24e-07!7;CL:1000746!4.24e-07!7;CL:0000095!4.70e-07!17;CL:0000123!4.70e-07!17;CL:0002319!7.53e-07!25 | |ontology_enrichment_celltype=CL:0000066!2.86e-32!254;CL:1000497!8.93e-13!18;CL:0002518!8.93e-13!18;CL:1000449!1.35e-12!16;CL:0000076!1.23e-11!62;CL:0002321!1.40e-11!248;CL:0000220!2.64e-11!246;CL:0000077!7.84e-11!19;CL:1000507!2.16e-10!12;CL:1000494!2.16e-10!12;CL:0002681!3.46e-09!13;CL:0002584!3.46e-09!13;CL:0000243!3.06e-08!15;CL:0000125!3.06e-08!15;CL:0000030!3.06e-08!15;CL:0000339!3.06e-08!15;CL:0000213!6.77e-08!57;CL:0000215!6.77e-08!57;CL:0000548!1.19e-07!679;CL:0000004!1.19e-07!679;CL:0000255!1.19e-07!679;CL:0000012!1.92e-07!682;CL:1000612!4.24e-07!7;CL:1000746!4.24e-07!7;CL:0000095!4.70e-07!17;CL:0000123!4.70e-07!17;CL:0002319!7.53e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.63e-22;19!CL:1000497;1.28e-16;17!CL:0002518;1.28e-16;17!CL:1000449;2.23e-15;15!CL:1000507;1.78e-14;10!CL:1000494;1.78e-14;10!CL:0002681;1.01e-11;12!CL:0002584;1.01e-11;12!CL:0002586;2.19e-11;3!CL:0000064;1.65e-10;3!CL:0000067;1.65e-10;3!CL:0005012;1.65e-10;3!CL:0002304;1.65e-10;3!CL:0000149;1.27e-08;4!CL:0000075;1.01e-07;27!CL:0000306;1.59e-07;4!CL:0002222;1.59e-07;4!CL:0002224;1.59e-07;4!CL:1000746;2.08e-07;7!CL:1000612;2.08e-07;7!CL:0000650;3.00e-07;2!CL:1000500;3.00e-07;2!CL:1000618;3.00e-07;2!CL:1001318;3.00e-07;2!CL:0002173;3.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.53e-22,19;CL:0000066,7.86e-21,253;CL:1000497,1.61e-16,17;CL:0002518,1.61e-16,17;CL:1000449,2.77e-15,15;CL:1000507,2.15e-14,10;CL:1000494,2.15e-14,10;CL:0002681,1.41e-11,12;CL:0002584,1.41e-11,12;CL:0002586,2.06e-11,3;CL:0000064,9.45e-11,3;CL:0000067,9.45e-11,3;CL:0005012,9.45e-11,3;CL:0002304,9.45e-11,3;CL:0000149,1.22e-08,4;CL:0000076,7.77e-08,63;CL:0000213,9.70e-08,58;CL:0000215,9.70e-08,58;CL:0000075,1.12e-07,27;CL:0000306,1.46e-07,4;CL:0002222,1.46e-07,4;CL:0002224,1.46e-07,4;CL:1000746,1.81e-07,7;CL:1000612,1.81e-07,7;CL:0000650,2.09e-07,2;CL:1000500,2.09e-07,2;CL:1000618,2.09e-07,2;CL:1001318,2.09e-07,2;CL:0002173,2.09e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.03e-11!106;DOID:162!1.19e-09!235;DOID:14566!1.80e-09!239;DOID:0050687!2.33e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.04e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.26e-13!11;UBERON:0004211!1.35e-12!16;UBERON:0001285!1.35e-12!16;UBERON:0007684!1.35e-12!16;UBERON:0003220!1.35e-12!16;UBERON:0004208!1.35e-12!16;UBERON:0006555!1.28e-11!17;UBERON:0005103!1.28e-11!17;UBERON:0000083!1.28e-11!17;UBERON:0009201!1.28e-11!17;UBERON:0004819!1.28e-11!17;UBERON:0006553!1.28e-11!17;UBERON:0003074!1.28e-11!17;UBERON:0003060!1.28e-11!17;UBERON:0000080!9.45e-11!18;UBERON:0002120!9.45e-11!18;UBERON:0004875!9.45e-11!18;UBERON:0005721!9.45e-11!18;UBERON:0005754!9.45e-11!18;UBERON:0007297!9.45e-11!18;UBERON:0009773!2.16e-10!12;UBERON:0001231!2.16e-10!12;UBERON:0004810!2.16e-10!12;UBERON:0001851!2.40e-10!16;UBERON:0000058!3.90e-10!26;UBERON:0004876!2.75e-09!20;UBERON:0001225!3.46e-09!13;UBERON:0008987!3.46e-09!13;UBERON:0003887!1.16e-08!21;UBERON:0003064!6.66e-08!37;UBERON:0000019!1.21e-07!19;UBERON:0000047!1.21e-07!19;UBERON:0004088!1.21e-07!19;UBERON:0003072!1.21e-07!19;UBERON:0003071!1.21e-07!19;UBERON:0004128!1.21e-07!19;UBERON:0002113!4.01e-07!27;UBERON:0003918!4.01e-07!27;UBERON:0005095!4.01e-07!27;UBERON:0007687!4.01e-07!27;UBERON:0003886!4.19e-07!63;UBERON:0000970!4.20e-07!20;UBERON:0000074!4.24e-07!7;UBERON:0001229!4.24e-07!7;UBERON:0001230!4.24e-07!7;UBERON:0005749!4.24e-07!7;UBERON:0004199!4.24e-07!7;UBERON:0004209!4.24e-07!7;UBERON:0004198!4.24e-07!7;UBERON:0000488!6.35e-07!4;UBERON:0006554!7.28e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.56e-28;11!UBERON:0000019;1.81e-15;19!UBERON:0000047;1.81e-15;19!UBERON:0004088;1.81e-15;19!UBERON:0010230;1.81e-15;19!UBERON:0006555;2.23e-15;15!UBERON:0004819;2.23e-15;15!UBERON:0001285;2.23e-15;15!UBERON:0007684;2.23e-15;15!UBERON:0000970;1.38e-14;20!UBERON:0004211;1.78e-14;10!UBERON:0009773;1.78e-14;10!UBERON:0001231;1.78e-14;10!UBERON:0004810;1.78e-14;10!UBERON:0002104;8.64e-14;21!UBERON:0001456;8.64e-14;21!UBERON:0000488;1.46e-13;4!UBERON:0006554;1.53e-12;30!UBERON:0001008;1.53e-12;30!UBERON:0000020;2.10e-12;23!UBERON:0001851;3.47e-12;15!UBERON:0010371;4.65e-12;31!UBERON:0001032;8.47e-12;24!UBERON:0004456;8.47e-12;24!UBERON:0001225;1.01e-11;12!UBERON:0008987;1.01e-11;12!UBERON:0001781;2.19e-11;3!UBERON:0001782;2.19e-11;3!UBERON:0002113;3.59e-11;24!UBERON:0011143;3.59e-11;24!UBERON:0001778;1.65e-10;3!UBERON:0001775;1.65e-10;3!UBERON:0001801;2.50e-10;14!UBERON:0000353;3.56e-09;15!UBERON:0002203;4.85e-09;6!UBERON:0001768;4.85e-09;6!UBERON:0002200;4.85e-09;6!UBERON:0000489;6.70e-09;29!UBERON:0010077;1.59e-07;4!UBERON:0005389;1.59e-07;4!UBERON:0000484;1.59e-07;4!UBERON:0000965;1.59e-07;4!UBERON:0001803;1.59e-07;4!UBERON:0000074;2.08e-07;7!UBERON:0001229;2.08e-07;7!UBERON:0003567;3.00e-07;2!UBERON:0003838;3.00e-07;2!UBERON:0003586;3.00e-07;2!UBERON:0005169;3.00e-07;2!UBERON:0002321;3.00e-07;2!UBERON:0005215;3.00e-07;2!UBERON:0002303;3.00e-07;2!UBERON:0002319;3.00e-07;2!UBERON:0000966;5.89e-07;5!UBERON:0005388;5.89e-07;5!UBERON:0001802;5.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.23e-28,11;UBERON:0004211,2.77e-15,15;UBERON:0009773,2.77e-15,15;UBERON:0001231,2.77e-15,15;UBERON:0001285,2.77e-15,15;UBERON:0007684,2.77e-15,15;UBERON:0004208,2.77e-15,15;UBERON:0000019,9.39e-15,20;UBERON:0000047,9.39e-15,20;UBERON:0010312,9.39e-15,20;UBERON:0004088,9.39e-15,20;UBERON:0010230,9.39e-15,20;UBERON:0003072,9.39e-15,20;UBERON:0004128,9.39e-15,20;UBERON:0003071,9.39e-15,20;UBERON:0004810,2.15e-14,10;UBERON:0006555,3.21e-14,16;UBERON:0004819,3.21e-14,16;UBERON:0000970,6.01e-14,21;UBERON:0002104,6.01e-14,21;UBERON:0000488,7.71e-14,4;UBERON:0001456,3.25e-13,22;UBERON:0001851,4.71e-12,15;UBERON:0000020,6.20e-12,24;UBERON:0001032,6.20e-12,24;UBERON:0004456,6.20e-12,24;UBERON:0001225,1.41e-11,12;UBERON:0008987,1.41e-11,12;UBERON:0001782,2.06e-11,3;UBERON:0005424,2.06e-11,3;UBERON:0001778,9.45e-11,3;UBERON:0001775,9.45e-11,3;UBERON:0005085,1.62e-10,31;UBERON:0001801,1.76e-10,14;UBERON:0002113,4.28e-10,26;UBERON:0003918,4.28e-10,26;UBERON:0011143,4.28e-10,26;UBERON:0005095,4.28e-10,26;UBERON:0007687,4.28e-10,26;UBERON:0002203,3.21e-09,6;UBERON:0001768,3.21e-09,6;UBERON:0002200,3.21e-09,6;UBERON:0000353,4.61e-09,15;UBERON:0001781,1.22e-08,4;UBERON:0000489,3.77e-08,31;UBERON:0010077,1.46e-07,4;UBERON:0005389,1.46e-07,4;UBERON:0000484,1.46e-07,4;UBERON:0002546,1.46e-07,4;UBERON:0000965,1.46e-07,4;UBERON:0001803,1.46e-07,4;UBERON:0003073,1.46e-07,4;UBERON:0005426,1.46e-07,4;UBERON:0010532,1.81e-07,7;UBERON:0000074,1.81e-07,7;UBERON:0001229,1.81e-07,7;UBERON:0001230,1.81e-07,7;UBERON:0003220,1.81e-07,7;UBERON:0005749,1.81e-07,7;UBERON:0004199,1.81e-07,7;UBERON:0004209,1.81e-07,7;UBERON:0004198,1.81e-07,7;UBERON:0003567,2.09e-07,2;UBERON:0003838,2.09e-07,2;UBERON:0003586,2.09e-07,2;UBERON:0005169,2.09e-07,2;UBERON:0002321,2.09e-07,2;UBERON:0005215,2.09e-07,2;UBERON:0002303,2.09e-07,2;UBERON:0002319,2.09e-07,2;UBERON:0006554,4.91e-07,47;UBERON:0001008,7.73e-07,48 | |||
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| ||
|short_description=p3@GDPD5 | |short_description=p3@GDPD5 | ||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p3@GDPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529721, uc001owo.3_5end |
EntrezGene: | GDPD5 |
HGNC: | 28804 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.53e-22 | 19 |
epithelial cell | 7.86e-21 | 253 |
kidney cell | 1.61e-16 | 17 |
kidney epithelial cell | 1.61e-16 | 17 |
epithelial cell of nephron | 2.77e-15 | 15 |
kidney tubule cell | 2.15e-14 | 10 |
nephron tubule epithelial cell | 2.15e-14 | 10 |
kidney cortical cell | 1.41e-11 | 12 |
renal cortical epithelial cell | 1.41e-11 | 12 |
retinal pigment epithelial cell | 2.06e-11 | 3 |
ciliated cell | 9.45e-11 | 3 |
ciliated epithelial cell | 9.45e-11 | 3 |
multi-ciliated epithelial cell | 9.45e-11 | 3 |
non-pigmented ciliary epithelial cell | 9.45e-11 | 3 |
visual pigment cell | 1.22e-08 | 4 |
squamous epithelial cell | 7.77e-08 | 63 |
lining cell | 9.70e-08 | 58 |
barrier cell | 9.70e-08 | 58 |
columnar/cuboidal epithelial cell | 1.12e-07 | 27 |
crystallin accumulating cell | 1.46e-07 | 4 |
vertebrate lens cell | 1.46e-07 | 4 |
lens epithelial cell | 1.46e-07 | 4 |
glomerular cell | 1.81e-07 | 7 |
kidney corpuscule cell | 1.81e-07 | 7 |
mesangial cell | 2.09e-07 | 2 |
kidney interstitial cell | 2.09e-07 | 2 |
juxtaglomerular complex cell | 2.09e-07 | 2 |
renal interstitial pericyte | 2.09e-07 | 2 |
extraglomerular mesangial cell | 2.09e-07 | 2 |
Ontology term | p-value | n |
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