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FFCP PHASE1:Mm9::chr18:56628893..56628932,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=107022
|EntrezGene=107022
|HGNC=
|HGNC=
|MCL_coexpression_id=170
|TSSclassifier=NA
|UniProt=Q8CAP5
|UniProt=Q8CAP5
|association_with_transcript=0bp_to_uc008eym.1_5end
|association_with_transcript=0bp_to_uc008eym.1_5end
|cluster_id=chr18:56628893..56628932,+
|description=CAGE_peak_2_at_Gramd3_5end
|description=CAGE_peak_2_at_Gramd3_5end
|id=chr18:56628893..56628932,+
|id=chr18:56628893..56628932,+
|ontology_enrichment_celltype=CL:0000791!9.85e-08!9;CL:0000789!9.85e-08!9;CL:0002420!9.85e-08!9;CL:0002419!9.85e-08!9;CL:0000790!9.85e-08!9;CL:0000624!5.49e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.92e-09,9;CL:0000789,2.92e-09,9;CL:0002420,2.92e-09,9;CL:0002419,2.92e-09,9;CL:0000790,2.92e-09,9;CL:0000624,2.47e-08,8;CL:0000542,7.62e-08,13;CL:0000051,7.62e-08,13;CL:0000838,1.06e-07,12;CL:0000084,6.85e-07,11;CL:0000827,6.85e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.17e-28!128;UBERON:0001555!3.17e-28!128;UBERON:0007026!3.17e-28!128;UBERON:0004119!3.43e-28!130;UBERON:0000925!3.43e-28!130;UBERON:0006595!3.43e-28!130;UBERON:0004921!4.34e-27!126;UBERON:0004185!4.34e-27!126;UBERON:0005409!6.58e-22!59;UBERON:0000160!2.01e-16!43;UBERON:0001041!2.94e-13!92;UBERON:0000077!3.92e-13!97;UBERON:0001004!1.80e-10!42;UBERON:0004177!2.99e-10!29;UBERON:0000065!3.79e-10!41;UBERON:0000072!3.34e-09!27;UBERON:0003408!1.01e-08!24;UBERON:0002370!2.09e-08!23;UBERON:0000974!2.09e-08!23;UBERON:0004807!2.09e-08!23;UBERON:0005058!2.09e-08!23;UBERON:0003351!2.09e-08!23;UBERON:0009113!2.09e-08!23;UBERON:0003295!2.09e-08!23;UBERON:0009722!2.09e-08!23;UBERON:0005562!2.09e-08!23;UBERON:0007690!2.09e-08!23;UBERON:0004923!2.16e-08!24;UBERON:0006562!2.25e-08!24;UBERON:0001557!2.25e-08!24;UBERON:0001042!2.25e-08!24;UBERON:0008814!2.25e-08!24;UBERON:0009145!2.25e-08!24;UBERON:0002193!6.30e-08!48;UBERON:0003104!2.23e-07!131;UBERON:0009142!2.23e-07!131;UBERON:0000344!2.30e-07!15;UBERON:0000063!3.13e-07!35;UBERON:0005911!3.41e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.01e-25,116;UBERON:0001555,4.01e-25,116;UBERON:0007026,4.01e-25,116;UBERON:0004119,3.55e-24,118;UBERON:0000925,3.55e-24,118;UBERON:0006595,3.55e-24,118;UBERON:0004921,6.68e-24,114;UBERON:0005409,5.00e-21,47;UBERON:0000160,7.31e-16,31;UBERON:0004177,2.87e-12,29;UBERON:0005057,2.87e-12,29;UBERON:0002193,2.14e-11,48;UBERON:0002405,2.14e-11,48;UBERON:0003408,5.69e-11,24;UBERON:0000072,7.64e-11,27;UBERON:0002370,1.40e-10,23;UBERON:0000974,1.40e-10,23;UBERON:0004807,1.40e-10,23;UBERON:0005058,1.40e-10,23;UBERON:0003351,1.40e-10,23;UBERON:0009113,1.40e-10,23;UBERON:0003295,1.40e-10,23;UBERON:0009722,1.40e-10,23;UBERON:0005562,1.40e-10,23;UBERON:0007690,1.40e-10,23;UBERON:0000077,3.30e-10,35;UBERON:0001004,4.24e-10,42;UBERON:0006562,8.20e-10,24;UBERON:0001557,8.20e-10,24;UBERON:0001042,8.20e-10,24;UBERON:0008814,8.20e-10,24;UBERON:0009145,8.20e-10,24;UBERON:0002390,9.24e-10,45;UBERON:0003061,9.24e-10,45;UBERON:0000065,1.01e-09,41;UBERON:0001041,1.20e-09,80;UBERON:0000344,8.38e-09,15;UBERON:0004923,3.67e-08,24;UBERON:0001242,9.06e-08,13;UBERON:0001262,9.06e-08,13;UBERON:0004786,9.06e-08,13;UBERON:0005911,1.00e-07,69;UBERON:0003929,1.82e-07,55
|phase1_expression=0,21.9854506812797,15.9249733786338,9.67885476181856,11.0197060588196,14.7733759282463,13.783145795136,140.615299227877,196.259478679423,217.914074005776,32.5314139628459,22.8148374726662,333.841423365851,330.536541546229,7.32841475994458,21.2599030759317,3.49780939064073,99.8437753358822,96.2543323912286,94.2145026991627,4.59233766815777,0.0992909512008853,0,12.9593862462659,8.71755268055246,18.9496548157957,10.7690499039769,15.2984575206981,9.88121781173144,4.03248207615889,9.5344119581781,0,0,0,8.66554859253824,11.802659820453,8.5751129630195,0,0,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,96.6427810892561,620.909993561711,661.768690511512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,3.76823835312181,1.72084775396277,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,5.84525810730278,6.08063677140237,5.56076889516262,5.709193985953,125.843811452525,2.52351636410202,0,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0.247194967734374,1.87979163995885,2.65383165584962,0.161766849947409,1.54589062922275,2.42437626567611,52.1896931410742,0,0.209446706813455,8.17462576667492,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,2.11491850037158,0.505445516867349,1.05220927943237,0,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0,0.492502392237286,0.0810688095458557,0.438599962275997,0.878200461164203,0.402619256281115,0.210289948564127,0.102904612379284,2.97376904685418,2.90895623329899,3.41261200856374,5.80591679651096,9.665059599157,6.6555563125703,7.78323153457046,7.03834816616469,8.54152310780121,7.08205505313247,8.29406189040889,10.9426059622633,11.5028811400281,7.19055526923377,16.4264917904768,13.7407478545513,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.784993639206874,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0,1.43768206527355,1.48856379067401,2.80833905803104,1.01031551178845,0.358794827043824,0.482443521363367,14.2259956428286,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,1.67506257441816,0.714130922658041,0.585400943573396,3.15270288212382,2.6575762757853,3.98636921643718,7.53771247692395,6.38934432903814,4.77341893318988,0,0,3.93411418415229,1.93155722413313,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,4.40014264145633,1.24645922567079,0.81443479676788,40.9125904971888,6.63725691699814,3.8844901784797,4.23252979750651,3.58349651536206,2.06711325016541,5.22639751504677,5.42699415653264,9.81541069589265,9.26893183800275,7.26884543252377,6.32511651449993,6.18813259489121,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0.847328283455281,0,2.96795255294664,0,1.32688434841943,4.65552141612232,5.0883678920969,8.45294426226567,0,27.1684700468586,0.619160603889667,2.77791791054568,5.65105371014073,18.8638034255015,21.7339264546196,0.339956859987711,0.139951452323658,0.552799895217695,20.0480829783174,0.474503990371703,2.64315307264903,3.45617090629764,2.92723614420256,4.36725127492355,11.5983337890946,11.6541372572724,13.8730649251536,92.8043208769237,6.83473244395618,0,0,0.330916980914195,0,0,0,0.117357238645754,0,0.104859344425711,0,0,31.917123183446,0.202725215290164,1.1298205288131,3.63778304337826,14.6801890447335,40.1336336658155,27.8853442886328,24.9595300925035,25.9483776366739,23.16686922312,28.432984208589,33.2331373322556,33.7703564157556,43.3613307093621,0.906921534460845,0,0,0,0.965947970160952,9.19644129710792,31.8683826225041,5.78794623513478,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.754505365544305,0.936415074698824,1.15245274328765,0.804096565378586,1.90517476513229,0.695305955669133,0.38581844092741,0.412085900803307,0.147198920134397,0,0.70990322463735,1.43061713968393,0.872078499793971,0.470546902076653,0.761531471025089,0.182927972872773,0.526139422875686,1.22223702461276,2.24456908663095,0.593175090620871,0.886540341380071,1.63692417267876,0.464810523557898,0.771626443924566,0.499621155875892,0.701794825336225,2.36358159453128,0,0.882365676478062,1.15933917810211
|phase1_expression=0,21.9854506812797,15.9249733786338,9.67885476181856,11.0197060588196,14.7733759282463,13.783145795136,140.615299227877,196.259478679423,217.914074005776,32.5314139628459,22.8148374726662,333.841423365851,330.536541546229,7.32841475994458,21.2599030759317,3.49780939064073,99.8437753358822,96.2543323912286,94.2145026991627,4.59233766815777,0.0992909512008853,0,12.9593862462659,8.71755268055246,18.9496548157957,10.7690499039769,15.2984575206981,9.88121781173144,4.03248207615889,9.5344119581781,0,0,0,8.66554859253824,11.802659820453,8.5751129630195,0,0,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,96.6427810892561,620.909993561711,661.768690511512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,3.76823835312181,1.72084775396277,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,5.84525810730278,6.08063677140237,5.56076889516262,5.709193985953,125.843811452525,2.52351636410202,0,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0.247194967734374,1.87979163995885,2.65383165584962,0.161766849947409,1.54589062922275,2.42437626567611,52.1896931410742,0,0.209446706813455,8.17462576667492,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,2.11491850037158,0.505445516867349,1.05220927943237,0,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0,0.492502392237286,0.0810688095458557,0.438599962275997,0.878200461164203,0.402619256281115,0.210289948564127,0.102904612379284,2.97376904685418,2.90895623329899,3.41261200856374,5.80591679651096,9.665059599157,6.6555563125703,7.78323153457046,7.03834816616469,8.54152310780121,7.08205505313247,8.29406189040889,10.9426059622633,11.5028811400281,7.19055526923377,16.4264917904768,13.7407478545513,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.784993639206874,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0,1.43768206527355,1.48856379067401,2.80833905803104,1.01031551178845,0.358794827043824,0.482443521363367,14.2259956428286,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,1.67506257441816,0.714130922658041,0.585400943573396,3.15270288212382,2.6575762757853,3.98636921643718,7.53771247692395,6.38934432903814,4.77341893318988,0,0,3.93411418415229,1.93155722413313,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,4.40014264145633,1.24645922567079,0.81443479676788,40.9125904971888,6.63725691699814,3.8844901784797,4.23252979750651,3.58349651536206,2.06711325016541,5.22639751504677,5.42699415653264,9.81541069589265,9.26893183800275,7.26884543252377,6.32511651449993,6.18813259489121,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0.847328283455281,0,2.96795255294664,0,1.32688434841943,4.65552141612232,5.0883678920969,8.45294426226567,0,27.1684700468586,0.619160603889667,2.77791791054568,5.65105371014073,18.8638034255015,21.7339264546196,0.339956859987711,0.139951452323658,0.552799895217695,20.0480829783174,0.474503990371703,2.64315307264903,3.45617090629764,2.92723614420256,4.36725127492355,11.5983337890946,11.6541372572724,13.8730649251536,92.8043208769237,6.83473244395618,0,0,0.330916980914195,0,0,0,0.117357238645754,0,0.104859344425711,0,0,31.917123183446,0.202725215290164,1.1298205288131,3.63778304337826,14.6801890447335,40.1336336658155,27.8853442886328,24.9595300925035,25.9483776366739,23.16686922312,28.432984208589,33.2331373322556,33.7703564157556,43.3613307093621,0.906921534460845,0,0,0,0.965947970160952,9.19644129710792,31.8683826225041,5.78794623513478,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.754505365544305,0.936415074698824,1.15245274328765,0.804096565378586,1.90517476513229,0.695305955669133,0.38581844092741,0.412085900803307,0.147198920134397,0,0.70990322463735,1.43061713968393,0.872078499793971,0.470546902076653,0.761531471025089,0.182927972872773,0.526139422875686,1.22223702461276,2.24456908663095,0.593175090620871,0.886540341380071,1.63692417267876,0.464810523557898,0.771626443924566,0.499621155875892,0.701794825336225,2.36358159453128,0,0.882365676478062,1.15933917810211
|short_description=p2@Gramd3
|short_description=p2@Gramd3
}}
}}

Latest revision as of 11:59, 1 October 2015

Short description:p2@Gramd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gramd3_5end
Coexpression cluster:MCL_coexpression_mm9:170
Association with transcript: 0bp_to_uc008eym.1_5end
EntrezGene:Gramd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gramd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9140.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7196.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2217.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F122.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4333.84
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8330.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A299.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A496.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A694.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.72
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I215.30
Ileum epithelium, pool1.CNhs13199.10252-104B99.88
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A296.64
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9620.91
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1661.77
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H9125.84
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H452.19
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D89.67
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E316.43
intestine, neonate N30.CNhs11131.1384-42G113.74
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G640.91
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G227.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H118.86
spleen, neonate N25.CNhs11099.1354-25G321.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B811.60
stomach, neonate N07.CNhs11210.718-18A911.65
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I192.80
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B531.92
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C114.68
thymus, embryo E18.CNhs10595.1273-19G440.13
thymus, neonate N02.CNhs11181.1541-43F827.89
thymus, neonate N03.CNhs11137.2104-43C724.96
thymus, neonate N06.CNhs11197.681-26C425.95
thymus, neonate N07.CNhs11211.713-19D323.17
thymus, neonate N10.CNhs11194.748-24E428.43
thymus, neonate N20.CNhs11186.820-7A233.23
thymus, neonate N25.CNhs11125.1362-25G733.77
thymus, neonate N30.CNhs11132.1393-42G243.36
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E531.87
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system4.01e-25116
digestive tract4.01e-25116
primitive gut4.01e-25116
endoderm-derived structure3.55e-24118
endoderm3.55e-24118
presumptive endoderm3.55e-24118
subdivision of digestive tract6.68e-24114
gastrointestinal system5.00e-2147
intestine7.31e-1631
hemopoietic organ2.87e-1229
immune organ2.87e-1229
hemolymphoid system2.14e-1148
immune system2.14e-1148
gland of gut5.69e-1124
segment of respiratory tract7.64e-1127
thymus1.40e-1023
neck1.40e-1023
respiratory system epithelium1.40e-1023
hemolymphoid system gland1.40e-1023
pharyngeal epithelium1.40e-1023
thymic region1.40e-1023
pharyngeal gland1.40e-1023
entire pharyngeal arch endoderm1.40e-1023
thymus primordium1.40e-1023
early pharyngeal endoderm1.40e-1023
mixed endoderm/mesoderm-derived structure3.30e-1035
respiratory system4.24e-1042
pharynx8.20e-1024
upper respiratory tract8.20e-1024
chordate pharynx8.20e-1024
pharyngeal arch system8.20e-1024
pharyngeal region of foregut8.20e-1024
hematopoietic system9.24e-1045
blood island9.24e-1045
respiratory tract1.01e-0941
foregut1.20e-0980
mucosa8.38e-0915
organ component layer3.67e-0824
intestinal mucosa9.06e-0813
wall of intestine9.06e-0813
gastrointestinal system mucosa9.06e-0813
endo-epithelium1.00e-0769
gut epithelium1.82e-0755
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