FF:11412-118E8: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (25 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004830 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004830 | ||
|accession_numbers=CAGE;DRX008219;DRR009091;DRZ000516;DRZ001901;DRZ011866;DRZ013251 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037182;DRR041548;DRZ007190 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000947,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0004573,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0004572,UBERON:0004537,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413,CL:0002544 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000047,FF:0000048,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor3.CNhs12022.11412-118E8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor3.CNhs12022.11412-118E8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor3.CNhs12022.11412-118E8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor3.CNhs12022.11412-118E8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor3.CNhs12022.11412-118E8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11412-118E8 | |id=FF:11412-118E8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000048 | ||
|is_obsolete= | |||
|library_id=CNhs12022 | |||
|library_id_phase_based=2:CNhs12022 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11412 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10011.GGTAGC.11412 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11412 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10011.GGTAGC.11412 | |||
|name=Endothelial Cells - Aortic, donor3 | |name=Endothelial Cells - Aortic, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12022,LSID837,release011,COMPLETED | |profile_hcage=CNhs12022,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10011,,, | |profile_srnaseq=SRhi10011,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.914271714844243,0.479771271764075,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0.512862501733515,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.374134038307478,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0.194599788733868,0,0,0,0,0,0,0,0,-0.0958212500732711,0,0,0,0,0,0,0.276697667712106,0,0,0,0.208542364919127,0.218022689276304,0,0,0,0,-0.0980353512377064,0.493672479938696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.194599788733868,0,0,0.439153236664629,0.835704765114336,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,0.081326285098856,0,0.268046638171675,0.0510846462103959,0,0,-0.0732883604725742,0,0,0,0,0,0,0,0,0,0.200385293431856,0,-0.0504125515893149,0,0,0,0,0,-0.11087244216454,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,0.277853275008874,0,0.0737203049401271,-0.0827201683234173,0,-0.250169727874423,-0.055712496781182,0,0,0,0.362663825180735,0.0717436029360985,0,0,-0.121779851751874,-0.0170970383684489,0,0,1.60370477579612,0,0.208255956553056,0.314102033369546,0,-0.184254899102041,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,-0.326988596678969,-0.0304099808375785,0,0,0,-0.063442094436781,0,0,-0.0447809955721464,0.170455527367663,0,-0.00256055079556383,0,0.556050456934433,0.268353745807404,0.421060302186053,0.0720144819300245,0.181103311013282,-0.189981719549847,0.0384667896448632,0.256376036630187,0.393643751655189,0.00499427485406378,0.400773347385373,0.147892928454063,0.502101292538887,0.084235570277857,0,0,0,0.126042039666047,0,0,-0.0594070975757459,0.103237405417113,0.0621897741959725,0.0816178537987036,0.100885697145097,0.143058844466893,0.432512112063906,-0.0267288359955671,0.000666816310530325,-0.324272430536766,0.155234229442512,0,0,0.11694145055749,-0.00145376557925714,0.20719653456496,0,-0.053269844909953,-0.0683442610773682,0.097299894366934,-0.030205654721378,0.111628110116976,0,0,-0.250272070486992,0,0,0,0,0,0.0611199230598369,-0.344892354296299,0.0956495988288756,0,0.0999348858586555,-0.0751786794737331,-0.133033500160376,0,0.0472411535053507,0,0,-0.0763099875552127,0,0.171848325897489,-0.00142931834554327,0.110574481752711,0.436045378552609,0.136152961922043,-0.217090269635606,0.0760776897777395,0.422722216614795,0.213006923195884,0.0702920921404543,-0.0881268324752877,0.118343134595455,-0.0605220427747408,-0.350992971237104,0.095117055663052,0.435159327858512,0,-0.0888264194708908,0,-0.114442937588696,0,0.387781447096272,-0.027052087333115,-0.439289374580686,-0.0473190632150913,0,0.132201210558539,0.832027735526917,0,0.0844381026618714,0.0310986015179015,0,-0.150367083334639,0.0867623750154827,-0.211650427864589,0.173664246138253,0,-0.0948476077870866,0,0,0.0570840444868002,-0.235476037764389,0,-0.0616443326612985,-0.0958212500732711,-0.409616252461427,-0.115971073434934,0,0,-0.645700337992725,0.0029236195136137,0,0.217094643925609,0.0602403735680845,0.661019286166095,-0.253326341486756,0.184912783474266,-0.108622809454255,0,0,-0.177527765965176,0,-0.147759823832725,0,0,0.104109429838173,0.077971675743735,0,0,0,0,0,-0.0589565109853561,0,0,0,0,0,-0.276089852028309,-0.0263281698320276,0,0.292013227400483,0,0,0,0.194599788733868,0,0,0,0,0.335376025457589,0.0225030026605229,-0.12301741567642,0,0,0,0,-0.215723402553475,-0.203236562094724,0,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,-0.425783898090016,0,0,0,0.792745171143523,0,0,0,0,0.152042950507384,0,0,-0.118548509246255,0,0.0870659423934244,-0.0815818795468414,0,-0.199020106467392,0.235020329342205,0.395790878894893,0,0,0.0671580285945328,0,0,-0.522562657493122,-0.060660551953184,0.194599788733868,0,0,0,0,0,0,0,-0.0197147236658879,0,0,0,0,0,0.194599788733868,0,0,0,0,0,0.0129525975980904,-0.0922240566585104,0.0237451206075879,0,0,0,0,0,0,0.140146557113307,-0.215124894352558,0,0,0,0,0,0.194599788733868,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.63103738314373,0,0,1.00344047793121,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.914271714844243,0,0,0,0,0,0,0,0.0536718621783299,0,0.32850516038442,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341713162136916,0,-0.0436471945378389,0.00490013870593398,0,0,0.0240624794370209,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194599788733868,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0.32850516038442,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.0312860085866469,0.273261351133096,0.0756559910293276,0,0,0,0.160968235968059,0,0,0,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114581320465229,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0.32850516038442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177377357595877,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.244128528154393,0,0,0,0,0,0,0,0,0,0,0,0.32850516038442,0,0,0,0,0.0323021820305593,0,0,0,0,0.535169113885353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0590108195546373,0,0,0.62901471212647,0,0,0,0,0,0,0,0,0,0,0,0,0.369387437750901,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,1.1799163807692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448821002861461,0.835704765114336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.098033244037336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02572500346703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164061922778461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.059936519919573,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0317165860483832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16425258019221,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0,0,0,0,0,0,0,0,0,0,-0.0412500915278073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0685560494485631,0,0,0.152312320256752,0,0.493023256665636,0.0756523435706453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0400762477245316,0,0,-0.137338502423895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.280072095322966,0,0,-0.397074688522015,0,0.32850516038442,0.021442837603604,0,0,0.14152634269867,0,0,-0.174992895090299,0.093984330772098,0,0,0,0,0,0,0,0,0,0.513381664140125,0,0,0,0,0,0,0,0,-0.0568589461625992,-0.269475635594569,0,-0.378836254350424,0,0,-0.458810994823772,0,0,0,-0.0959594073735869 | |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=CA304-R10a | |rna_catalog_number=CA304-R10a | ||
| Line 54: | Line 80: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.18E+10 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10011.GGTAGC | |||
|sample_age=21 | |sample_age=21 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.49116916380311e-221!GO:0005737;cytoplasm;1.18875718165013e-191!GO:0043226;organelle;3.8038730159282e-169!GO:0043229;intracellular organelle;8.4816527488693e-169!GO:0043231;intracellular membrane-bound organelle;6.06274282855679e-162!GO:0043227;membrane-bound organelle;1.11373398520066e-161!GO:0044444;cytoplasmic part;7.8368437408325e-132!GO:0044422;organelle part;1.47492638375395e-128!GO:0044446;intracellular organelle part;3.33430357404761e-127!GO:0032991;macromolecular complex;1.73110568193268e-88!GO:0005515;protein binding;4.99618321779745e-85!GO:0044238;primary metabolic process;4.7091292291292e-79!GO:0044237;cellular metabolic process;1.73122684639623e-78!GO:0030529;ribonucleoprotein complex;2.86829456072474e-75!GO:0043170;macromolecule metabolic process;1.06830498504099e-71!GO:0005739;mitochondrion;5.11721689483898e-64!GO:0043233;organelle lumen;1.34876350558926e-63!GO:0031974;membrane-enclosed lumen;1.34876350558926e-63!GO:0003723;RNA binding;3.06814843663602e-60!GO:0044428;nuclear part;7.25777581441919e-59!GO:0005634;nucleus;6.77173026815543e-58!GO:0019538;protein metabolic process;1.64901397733549e-55!GO:0031090;organelle membrane;1.20466215675067e-50!GO:0044260;cellular macromolecule metabolic process;1.78898931481537e-49!GO:0044267;cellular protein metabolic process;3.37313760491087e-49!GO:0005840;ribosome;2.34185094434252e-48!GO:0016043;cellular component organization and biogenesis;4.65278935490551e-48!GO:0006412;translation;3.08042525339767e-47!GO:0043234;protein complex;1.39157669330427e-45!GO:0044429;mitochondrial part;1.32533301840189e-43!GO:0003735;structural constituent of ribosome;2.4812845935686e-42!GO:0005829;cytosol;2.70079552846827e-41!GO:0031967;organelle envelope;9.4183050852744e-41!GO:0031975;envelope;2.18830061021958e-40!GO:0015031;protein transport;4.32846678403466e-40!GO:0033036;macromolecule localization;5.62471066536123e-40!GO:0006396;RNA processing;2.91821952461226e-39!GO:0009058;biosynthetic process;4.36595327479228e-38!GO:0031981;nuclear lumen;2.80126160962657e-37!GO:0008104;protein localization;5.16306752693759e-37!GO:0009059;macromolecule biosynthetic process;6.24730724516397e-37!GO:0033279;ribosomal subunit;6.61912060898521e-37!GO:0044249;cellular biosynthetic process;7.39347881797881e-37!GO:0045184;establishment of protein localization;7.85107374451031e-37!GO:0043283;biopolymer metabolic process;1.31341653960498e-36!GO:0046907;intracellular transport;2.63217871499254e-32!GO:0043228;non-membrane-bound organelle;4.97139723520424e-32!GO:0043232;intracellular non-membrane-bound organelle;4.97139723520424e-32!GO:0016071;mRNA metabolic process;1.50019648239966e-30!GO:0005740;mitochondrial envelope;3.00355909646255e-30!GO:0065003;macromolecular complex assembly;4.93421439262631e-30!GO:0010467;gene expression;6.05872060922984e-30!GO:0006996;organelle organization and biogenesis;8.56369632405362e-30!GO:0031966;mitochondrial membrane;1.94601472508821e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.57811722549445e-28!GO:0008380;RNA splicing;1.15745162906658e-27!GO:0019866;organelle inner membrane;3.27524940508113e-27!GO:0006886;intracellular protein transport;3.80910260133434e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.80910260133434e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.2529348096445e-26!GO:0022607;cellular component assembly;1.96591075976698e-26!GO:0006397;mRNA processing;3.18068568855283e-26!GO:0005743;mitochondrial inner membrane;2.97072060934136e-25!GO:0000166;nucleotide binding;1.03447323526737e-23!GO:0044445;cytosolic part;4.69231650287399e-23!GO:0005654;nucleoplasm;1.25911252077688e-22!GO:0051649;establishment of cellular localization;9.180143513339e-22!GO:0051641;cellular localization;1.21036186933364e-21!GO:0006119;oxidative phosphorylation;1.92267032602745e-21!GO:0016462;pyrophosphatase activity;8.89742113564361e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.14495566918104e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.48960014533742e-20!GO:0005681;spliceosome;1.92023222578819e-20!GO:0017111;nucleoside-triphosphatase activity;1.92023222578819e-20!GO:0012505;endomembrane system;3.07742929490341e-20!GO:0006259;DNA metabolic process;1.23250458385414e-19!GO:0044455;mitochondrial membrane part;3.34502924843313e-19!GO:0015934;large ribosomal subunit;4.84300706428108e-19!GO:0015935;small ribosomal subunit;6.29209737731921e-19!GO:0044451;nucleoplasm part;8.86998152245837e-19!GO:0032553;ribonucleotide binding;6.92027912924213e-18!GO:0032555;purine ribonucleotide binding;6.92027912924213e-18!GO:0006457;protein folding;7.45178993720385e-18!GO:0017076;purine nucleotide binding;1.01276922001519e-17!GO:0016874;ligase activity;1.29762070641236e-17!GO:0008134;transcription factor binding;1.97237654276995e-17!GO:0043412;biopolymer modification;2.49650732176243e-17!GO:0005794;Golgi apparatus;2.66996957797895e-17!GO:0007049;cell cycle;3.36244145737505e-17!GO:0005783;endoplasmic reticulum;3.46409476355056e-17!GO:0006512;ubiquitin cycle;9.98596761516634e-17!GO:0031980;mitochondrial lumen;1.35944696319972e-16!GO:0005759;mitochondrial matrix;1.35944696319972e-16!GO:0005730;nucleolus;2.2262369937771e-16!GO:0005746;mitochondrial respiratory chain;3.94190505601546e-16!GO:0044265;cellular macromolecule catabolic process;4.73233911198276e-16!GO:0022618;protein-RNA complex assembly;6.70356121905251e-16!GO:0006464;protein modification process;9.20668226608559e-16!GO:0016192;vesicle-mediated transport;2.28677163921944e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.39622974127441e-15!GO:0006605;protein targeting;3.40908491459478e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.85348854006493e-15!GO:0019941;modification-dependent protein catabolic process;4.09672124190715e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.09672124190715e-15!GO:0032559;adenyl ribonucleotide binding;4.57131951370054e-15!GO:0044257;cellular protein catabolic process;5.02588236967549e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.08323859887357e-15!GO:0005524;ATP binding;5.15643041280747e-15!GO:0043285;biopolymer catabolic process;6.10586362206702e-15!GO:0006511;ubiquitin-dependent protein catabolic process;6.5148868450447e-15!GO:0030554;adenyl nucleotide binding;9.52632227837303e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.44332703711776e-14!GO:0044432;endoplasmic reticulum part;1.70755610020517e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.95889802864336e-14!GO:0003954;NADH dehydrogenase activity;1.95889802864336e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.95889802864336e-14!GO:0048770;pigment granule;2.66327060176565e-14!GO:0042470;melanosome;2.66327060176565e-14!GO:0009057;macromolecule catabolic process;3.75551691810598e-14!GO:0051186;cofactor metabolic process;4.15888866025827e-14!GO:0008135;translation factor activity, nucleic acid binding;1.33527030259195e-13!GO:0043687;post-translational protein modification;2.02072508066509e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.0364896963511e-13!GO:0048193;Golgi vesicle transport;2.0364896963511e-13!GO:0030163;protein catabolic process;2.27793634328308e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.76433761706591e-13!GO:0044248;cellular catabolic process;5.94498355141359e-13!GO:0005761;mitochondrial ribosome;8.50800047077968e-13!GO:0000313;organellar ribosome;8.50800047077968e-13!GO:0022402;cell cycle process;9.01698289591432e-13!GO:0051082;unfolded protein binding;1.43987117728143e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.5737269414565e-12!GO:0045271;respiratory chain complex I;1.5737269414565e-12!GO:0005747;mitochondrial respiratory chain complex I;1.5737269414565e-12!GO:0042623;ATPase activity, coupled;1.68574996632099e-12!GO:0003676;nucleic acid binding;2.18850582931116e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.40315254009605e-12!GO:0042773;ATP synthesis coupled electron transport;2.40315254009605e-12!GO:0016887;ATPase activity;3.51413664932554e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.51819648817829e-12!GO:0000278;mitotic cell cycle;5.77342779617083e-12!GO:0003712;transcription cofactor activity;1.30038508032376e-11!GO:0012501;programmed cell death;1.32730752944893e-11!GO:0005635;nuclear envelope;1.78206608405965e-11!GO:0031965;nuclear membrane;1.84311721092012e-11!GO:0006915;apoptosis;2.15209208320672e-11!GO:0042254;ribosome biogenesis and assembly;2.92352919936342e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.60952719952808e-11!GO:0000375;RNA splicing, via transesterification reactions;3.60952719952808e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.60952719952808e-11!GO:0006913;nucleocytoplasmic transport;7.72408441661841e-11!GO:0044453;nuclear membrane part;1.14796831406592e-10!GO:0003743;translation initiation factor activity;1.16977217227151e-10!GO:0008639;small protein conjugating enzyme activity;1.3100987118496e-10!GO:0051169;nuclear transport;1.88493244418064e-10!GO:0006732;coenzyme metabolic process;2.01345280097802e-10!GO:0004842;ubiquitin-protein ligase activity;2.38853267194539e-10!GO:0009055;electron carrier activity;3.59855224690688e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.73727320757363e-10!GO:0016070;RNA metabolic process;3.86336317369346e-10!GO:0006413;translational initiation;4.59844527816174e-10!GO:0005793;ER-Golgi intermediate compartment;4.62240054332991e-10!GO:0008219;cell death;4.8098851968039e-10!GO:0016265;death;4.8098851968039e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.27370298535495e-10!GO:0009259;ribonucleotide metabolic process;5.47947922701838e-10!GO:0048523;negative regulation of cellular process;5.49147203683135e-10!GO:0006163;purine nucleotide metabolic process;7.83466884199036e-10!GO:0006974;response to DNA damage stimulus;8.55858964400751e-10!GO:0019787;small conjugating protein ligase activity;9.7095614977688e-10!GO:0005789;endoplasmic reticulum membrane;1.03069703730767e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.05574640876073e-09!GO:0006793;phosphorus metabolic process;1.1834095728326e-09!GO:0006796;phosphate metabolic process;1.1834095728326e-09!GO:0009150;purine ribonucleotide metabolic process;1.28629387671431e-09!GO:0006461;protein complex assembly;1.48939240030481e-09!GO:0051726;regulation of cell cycle;1.60302964846928e-09!GO:0000074;regulation of progression through cell cycle;3.00237184669774e-09!GO:0051276;chromosome organization and biogenesis;3.52884252109067e-09!GO:0016604;nuclear body;3.70521139577607e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.8391509166613e-09!GO:0017038;protein import;4.21539140388777e-09!GO:0006446;regulation of translational initiation;4.48753752601676e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.14624535060677e-09!GO:0008565;protein transporter activity;5.37807197938866e-09!GO:0006323;DNA packaging;5.68019594206099e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.9530168348649e-09!GO:0006164;purine nucleotide biosynthetic process;7.62058226422295e-09!GO:0009141;nucleoside triphosphate metabolic process;1.01899946590842e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.18200900369886e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.18200900369886e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.27949076174137e-08!GO:0006399;tRNA metabolic process;1.29347461977718e-08!GO:0016310;phosphorylation;1.32331578512767e-08!GO:0016881;acid-amino acid ligase activity;1.38403951060578e-08!GO:0009260;ribonucleotide biosynthetic process;1.40013440054093e-08!GO:0008026;ATP-dependent helicase activity;1.58798214499327e-08!GO:0005643;nuclear pore;1.69836276796311e-08!GO:0048519;negative regulation of biological process;1.88627185238041e-08!GO:0015986;ATP synthesis coupled proton transport;1.98987590385749e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.98987590385749e-08!GO:0050794;regulation of cellular process;2.29038517388143e-08!GO:0006260;DNA replication;2.29722279186365e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.43918857581243e-08!GO:0004386;helicase activity;2.55894949478186e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.20049705025723e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.20049705025723e-08!GO:0019829;cation-transporting ATPase activity;4.23993616955771e-08!GO:0046034;ATP metabolic process;4.91582669512792e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.45763778194481e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.45763778194481e-08!GO:0006366;transcription from RNA polymerase II promoter;5.64073619507213e-08!GO:0065002;intracellular protein transport across a membrane;5.92872727862452e-08!GO:0005694;chromosome;6.01509105627836e-08!GO:0006364;rRNA processing;6.15371943022378e-08!GO:0009056;catabolic process;8.80011755430757e-08!GO:0007067;mitosis;9.56780198782407e-08!GO:0000087;M phase of mitotic cell cycle;9.68900674006733e-08!GO:0046930;pore complex;1.00853732489519e-07!GO:0044431;Golgi apparatus part;1.06477210351641e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.15123681768762e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.15123681768762e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.15123681768762e-07!GO:0009719;response to endogenous stimulus;1.26708940768693e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.27213642750387e-07!GO:0044427;chromosomal part;1.39788688945548e-07!GO:0016740;transferase activity;1.53633583040791e-07!GO:0006754;ATP biosynthetic process;1.88509780565577e-07!GO:0006753;nucleoside phosphate metabolic process;1.88509780565577e-07!GO:0006281;DNA repair;1.9089596985001e-07!GO:0016072;rRNA metabolic process;1.92371910261802e-07!GO:0065004;protein-DNA complex assembly;2.04150396357758e-07!GO:0051301;cell division;2.34896179102797e-07!GO:0031252;leading edge;2.47649987649173e-07!GO:0043067;regulation of programmed cell death;2.68746440942436e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.69136296677616e-07!GO:0009060;aerobic respiration;2.69729123566834e-07!GO:0051246;regulation of protein metabolic process;2.7885600231299e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.94304431050214e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.95038741300172e-07!GO:0042981;regulation of apoptosis;2.97507060780533e-07!GO:0043038;amino acid activation;3.14725557016094e-07!GO:0006418;tRNA aminoacylation for protein translation;3.14725557016094e-07!GO:0043039;tRNA aminoacylation;3.14725557016094e-07!GO:0051188;cofactor biosynthetic process;3.17253493351387e-07!GO:0005788;endoplasmic reticulum lumen;3.27072327309964e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.94548036793744e-07!GO:0009117;nucleotide metabolic process;4.00129744526809e-07!GO:0006333;chromatin assembly or disassembly;4.52209641404535e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.20066039225749e-07!GO:0005768;endosome;5.68514417782116e-07!GO:0000785;chromatin;5.95595528331518e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.45604587287578e-07!GO:0030036;actin cytoskeleton organization and biogenesis;6.79298527922266e-07!GO:0032446;protein modification by small protein conjugation;7.4993240993814e-07!GO:0016567;protein ubiquitination;8.35238509045961e-07!GO:0022403;cell cycle phase;8.4345939412796e-07!GO:0016491;oxidoreductase activity;8.49240382433911e-07!GO:0015630;microtubule cytoskeleton;9.44268333213662e-07!GO:0045786;negative regulation of progression through cell cycle;9.5420547674095e-07!GO:0016607;nuclear speck;9.74091210286047e-07!GO:0003924;GTPase activity;9.75714525625441e-07!GO:0050657;nucleic acid transport;1.31071871929792e-06!GO:0051236;establishment of RNA localization;1.31071871929792e-06!GO:0050658;RNA transport;1.31071871929792e-06!GO:0006403;RNA localization;1.36546645622964e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.83017189503733e-06!GO:0030120;vesicle coat;1.91729185412659e-06!GO:0030662;coated vesicle membrane;1.91729185412659e-06!GO:0016787;hydrolase activity;1.98436270174811e-06!GO:0043069;negative regulation of programmed cell death;2.0772286889475e-06!GO:0045333;cellular respiration;2.35028442513359e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.42909097164944e-06!GO:0006916;anti-apoptosis;2.49769331922492e-06!GO:0048475;coated membrane;2.55091376676318e-06!GO:0030117;membrane coat;2.55091376676318e-06!GO:0007005;mitochondrion organization and biogenesis;2.69278739389006e-06!GO:0031988;membrane-bound vesicle;2.78582385872974e-06!GO:0000139;Golgi membrane;2.82906064581205e-06!GO:0000151;ubiquitin ligase complex;2.88485645167214e-06!GO:0045259;proton-transporting ATP synthase complex;3.69755837386078e-06!GO:0003714;transcription corepressor activity;3.92031895742643e-06!GO:0043066;negative regulation of apoptosis;4.23928912909677e-06!GO:0030029;actin filament-based process;4.42107673749341e-06!GO:0051170;nuclear import;4.56577148820204e-06!GO:0005667;transcription factor complex;5.77040908465556e-06!GO:0006606;protein import into nucleus;6.29925077467227e-06!GO:0006099;tricarboxylic acid cycle;6.83697204408255e-06!GO:0046356;acetyl-CoA catabolic process;6.83697204408255e-06!GO:0000245;spliceosome assembly;9.05384779457231e-06!GO:0008092;cytoskeletal protein binding;9.67644680755547e-06!GO:0016044;membrane organization and biogenesis;1.02952501588744e-05!GO:0051187;cofactor catabolic process;1.17548087237524e-05!GO:0006334;nucleosome assembly;1.17555521911479e-05!GO:0031982;vesicle;1.18340464934089e-05!GO:0006752;group transfer coenzyme metabolic process;1.23073242087242e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.28337600350277e-05!GO:0031410;cytoplasmic vesicle;1.31480422795984e-05!GO:0016568;chromatin modification;1.33219984733084e-05!GO:0006084;acetyl-CoA metabolic process;1.35106135955872e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.38596596442532e-05!GO:0003724;RNA helicase activity;1.40827606009161e-05!GO:0050789;regulation of biological process;1.58346745428788e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.60165290952711e-05!GO:0003713;transcription coactivator activity;1.63687830301252e-05!GO:0005769;early endosome;1.64436892996078e-05!GO:0007243;protein kinase cascade;1.72779011586924e-05!GO:0005770;late endosome;1.74150908106705e-05!GO:0007264;small GTPase mediated signal transduction;1.74150908106705e-05!GO:0044440;endosomal part;1.78517543166224e-05!GO:0010008;endosome membrane;1.78517543166224e-05!GO:0005525;GTP binding;1.91793891440234e-05!GO:0009108;coenzyme biosynthetic process;1.95928489325991e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.98824346619309e-05!GO:0006091;generation of precursor metabolites and energy;2.00786460723716e-05!GO:0007010;cytoskeleton organization and biogenesis;2.37988400404979e-05!GO:0005762;mitochondrial large ribosomal subunit;2.47753088891609e-05!GO:0000315;organellar large ribosomal subunit;2.47753088891609e-05!GO:0045454;cell redox homeostasis;2.61729572708631e-05!GO:0003697;single-stranded DNA binding;2.68031780505206e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.70308284217595e-05!GO:0015399;primary active transmembrane transporter activity;2.70308284217595e-05!GO:0005773;vacuole;2.71193893806514e-05!GO:0031968;organelle outer membrane;2.86616452814638e-05!GO:0016779;nucleotidyltransferase activity;3.03134472659503e-05!GO:0019899;enzyme binding;3.13385146254974e-05!GO:0019867;outer membrane;3.44626958463461e-05!GO:0051028;mRNA transport;3.53378054754379e-05!GO:0016853;isomerase activity;3.54214275831721e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.67845352405947e-05!GO:0031497;chromatin assembly;3.95671289765666e-05!GO:0005813;centrosome;4.01330176833653e-05!GO:0009109;coenzyme catabolic process;4.08691438782347e-05!GO:0016563;transcription activator activity;4.49289551984378e-05!GO:0016564;transcription repressor activity;4.54257298609701e-05!GO:0048522;positive regulation of cellular process;4.63337696805537e-05!GO:0065009;regulation of a molecular function;4.91870745036444e-05!GO:0030867;rough endoplasmic reticulum membrane;5.40213793461096e-05!GO:0019843;rRNA binding;5.66094693816863e-05!GO:0008047;enzyme activator activity;5.97765257089914e-05!GO:0004298;threonine endopeptidase activity;7.84770867480945e-05!GO:0005741;mitochondrial outer membrane;7.96807122987183e-05!GO:0043623;cellular protein complex assembly;8.3546840535779e-05!GO:0005798;Golgi-associated vesicle;8.95418661169831e-05!GO:0005815;microtubule organizing center;0.000103584554551591!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000154421943665482!GO:0000279;M phase;0.000156563003845317!GO:0005905;coated pit;0.000159526665103853!GO:0032561;guanyl ribonucleotide binding;0.000168659246470993!GO:0019001;guanyl nucleotide binding;0.000168659246470993!GO:0043492;ATPase activity, coupled to movement of substances;0.000169738577852587!GO:0043566;structure-specific DNA binding;0.000176954735877802!GO:0051329;interphase of mitotic cell cycle;0.000182365009308587!GO:0008186;RNA-dependent ATPase activity;0.000200951136883621!GO:0006613;cotranslational protein targeting to membrane;0.000204600249561921!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000220762535345996!GO:0033116;ER-Golgi intermediate compartment membrane;0.000227816654716589!GO:0007265;Ras protein signal transduction;0.000233251938042779!GO:0051427;hormone receptor binding;0.000255782413215052!GO:0051087;chaperone binding;0.000271291873987991!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000282378395358786!GO:0000323;lytic vacuole;0.000283469442720605!GO:0005764;lysosome;0.000283469442720605!GO:0051325;interphase;0.000287273007294795!GO:0005096;GTPase activator activity;0.000291772044853465!GO:0008654;phospholipid biosynthetic process;0.000331193879160808!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000367364149052903!GO:0009165;nucleotide biosynthetic process;0.000367458531147706!GO:0043681;protein import into mitochondrion;0.000371616348463987!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000388832871846623!GO:0005048;signal sequence binding;0.000395440586128176!GO:0003899;DNA-directed RNA polymerase activity;0.000419598431413464!GO:0016859;cis-trans isomerase activity;0.000455474575833443!GO:0005885;Arp2/3 protein complex;0.000466388645349478!GO:0008361;regulation of cell size;0.000516838872714624!GO:0048471;perinuclear region of cytoplasm;0.000518786142673377!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00052451389562427!GO:0035257;nuclear hormone receptor binding;0.0005351662345881!GO:0030027;lamellipodium;0.000547429568264179!GO:0004004;ATP-dependent RNA helicase activity;0.000557187054759212!GO:0016049;cell growth;0.000571512364727675!GO:0008632;apoptotic program;0.000581474512205769!GO:0044262;cellular carbohydrate metabolic process;0.00060048619176363!GO:0007242;intracellular signaling cascade;0.00067321381084703!GO:0015992;proton transport;0.000732198911117879!GO:0031324;negative regulation of cellular metabolic process;0.000735804863522816!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000753588124983614!GO:0006818;hydrogen transport;0.000775818804057449!GO:0001558;regulation of cell growth;0.000786972763009739!GO:0015980;energy derivation by oxidation of organic compounds;0.000792750543726183!GO:0006897;endocytosis;0.000795703685927473!GO:0010324;membrane invagination;0.000795703685927473!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000799637194044133!GO:0031072;heat shock protein binding;0.000800320067348727!GO:0051168;nuclear export;0.000832662170375041!GO:0005819;spindle;0.000844077160406619!GO:0043021;ribonucleoprotein binding;0.000934293679435268!GO:0065007;biological regulation;0.000955216415584419!GO:0051920;peroxiredoxin activity;0.00108212796452789!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00109581381490628!GO:0051789;response to protein stimulus;0.00117148284462474!GO:0006986;response to unfolded protein;0.00117148284462474!GO:0000314;organellar small ribosomal subunit;0.00124888067810888!GO:0005763;mitochondrial small ribosomal subunit;0.00124888067810888!GO:0006626;protein targeting to mitochondrion;0.0012837359924195!GO:0051252;regulation of RNA metabolic process;0.00138320164566427!GO:0007006;mitochondrial membrane organization and biogenesis;0.0015790567570109!GO:0008139;nuclear localization sequence binding;0.00158810700796883!GO:0042802;identical protein binding;0.0016234902701739!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00165112332013753!GO:0004674;protein serine/threonine kinase activity;0.00170725956407576!GO:0003779;actin binding;0.0017313428112014!GO:0030880;RNA polymerase complex;0.00176554532429531!GO:0006414;translational elongation;0.00178739153503977!GO:0050790;regulation of catalytic activity;0.00185956081762718!GO:0005791;rough endoplasmic reticulum;0.00186124747092976!GO:0009892;negative regulation of metabolic process;0.00193275491022508!GO:0016301;kinase activity;0.00208677594790759!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00209529688544238!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00231673665405557!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00231673665405557!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00231673665405557!GO:0005083;small GTPase regulator activity;0.00297835701167971!GO:0006839;mitochondrial transport;0.00298301447574116!GO:0006402;mRNA catabolic process;0.00301751276991936!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00306919677328665!GO:0022890;inorganic cation transmembrane transporter activity;0.00311271298361628!GO:0048487;beta-tubulin binding;0.00314094106008284!GO:0030133;transport vesicle;0.0032855305101817!GO:0030695;GTPase regulator activity;0.00345291277175944!GO:0017166;vinculin binding;0.00345893685056981!GO:0006950;response to stress;0.00361919051064204!GO:0045045;secretory pathway;0.00374794583061219!GO:0000059;protein import into nucleus, docking;0.00376349113124836!GO:0030659;cytoplasmic vesicle membrane;0.00384701226720943!GO:0030041;actin filament polymerization;0.00390194074076757!GO:0003729;mRNA binding;0.00390696407725541!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00423099586669152!GO:0000428;DNA-directed RNA polymerase complex;0.00423099586669152!GO:0030132;clathrin coat of coated pit;0.00424317842656786!GO:0007050;cell cycle arrest;0.00430197865895249!GO:0006509;membrane protein ectodomain proteolysis;0.00430871996525896!GO:0033619;membrane protein proteolysis;0.00430871996525896!GO:0048518;positive regulation of biological process;0.00442891457118033!GO:0030134;ER to Golgi transport vesicle;0.00450945136227541!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0045126274704689!GO:0005684;U2-dependent spliceosome;0.00482341332726635!GO:0045941;positive regulation of transcription;0.0049599550298297!GO:0001726;ruffle;0.00496026849691958!GO:0006383;transcription from RNA polymerase III promoter;0.00499306321227474!GO:0030663;COPI coated vesicle membrane;0.00500038781517224!GO:0030126;COPI vesicle coat;0.00500038781517224!GO:0006401;RNA catabolic process;0.00505871755269609!GO:0003711;transcription elongation regulator activity;0.00538130611452907!GO:0000786;nucleosome;0.00557664480113428!GO:0006612;protein targeting to membrane;0.00564578000173335!GO:0043284;biopolymer biosynthetic process;0.00584838071513043!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00585192465744558!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00585192465744558!GO:0030658;transport vesicle membrane;0.00589822956052653!GO:0003684;damaged DNA binding;0.00596720998047727!GO:0005874;microtubule;0.00601423160937095!GO:0045792;negative regulation of cell size;0.00631637120636249!GO:0008033;tRNA processing;0.00650310098291299!GO:0051101;regulation of DNA binding;0.00655634006784754!GO:0015631;tubulin binding;0.00662166918121918!GO:0007266;Rho protein signal transduction;0.00668870818894112!GO:0040008;regulation of growth;0.00687091609574114!GO:0030137;COPI-coated vesicle;0.0068952872220292!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00691910742816814!GO:0006891;intra-Golgi vesicle-mediated transport;0.00692466780256328!GO:0043488;regulation of mRNA stability;0.00698324897611782!GO:0043487;regulation of RNA stability;0.00698324897611782!GO:0006261;DNA-dependent DNA replication;0.00717849099879077!GO:0030308;negative regulation of cell growth;0.00718949937919492!GO:0016363;nuclear matrix;0.00720806209420377!GO:0044452;nucleolar part;0.00723699549972667!GO:0006778;porphyrin metabolic process;0.00734751054478155!GO:0033013;tetrapyrrole metabolic process;0.00734751054478155!GO:0030127;COPII vesicle coat;0.00734751054478155!GO:0012507;ER to Golgi transport vesicle membrane;0.00734751054478155!GO:0005637;nuclear inner membrane;0.00739555159501008!GO:0015036;disulfide oxidoreductase activity;0.00753875678158735!GO:0033673;negative regulation of kinase activity;0.00773988672554008!GO:0006469;negative regulation of protein kinase activity;0.00773988672554008!GO:0009967;positive regulation of signal transduction;0.0077962063086728!GO:0008154;actin polymerization and/or depolymerization;0.00790060900251851!GO:0045893;positive regulation of transcription, DNA-dependent;0.00800316013242928!GO:0000075;cell cycle checkpoint;0.00843348650486073!GO:0005774;vacuolar membrane;0.00845136495974055!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00849605963154062!GO:0006352;transcription initiation;0.00850716712754127!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0085410261948727!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0086588063810181!GO:0015002;heme-copper terminal oxidase activity;0.0086588063810181!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0086588063810181!GO:0004129;cytochrome-c oxidase activity;0.0086588063810181!GO:0030118;clathrin coat;0.0087640806456697!GO:0016197;endosome transport;0.00884277144182367!GO:0032508;DNA duplex unwinding;0.00918061676211291!GO:0032392;DNA geometric change;0.00918061676211291!GO:0051348;negative regulation of transferase activity;0.00947906064533098!GO:0048468;cell development;0.0097285734970111!GO:0009966;regulation of signal transduction;0.009734372468136!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0100274177854783!GO:0035258;steroid hormone receptor binding;0.0101965681611461!GO:0006611;protein export from nucleus;0.0102192511491534!GO:0006892;post-Golgi vesicle-mediated transport;0.0102560555522114!GO:0046483;heterocycle metabolic process;0.0105490093743311!GO:0000082;G1/S transition of mitotic cell cycle;0.0110147428264301!GO:0031625;ubiquitin protein ligase binding;0.011075411335275!GO:0000287;magnesium ion binding;0.0110838706512174!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0111989041358639!GO:0003756;protein disulfide isomerase activity;0.0113854798372756!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0113854798372756!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0114192975680997!GO:0005862;muscle thin filament tropomyosin;0.0115277754065461!GO:0051540;metal cluster binding;0.0115837977459793!GO:0051536;iron-sulfur cluster binding;0.0115837977459793!GO:0007051;spindle organization and biogenesis;0.0116843802646853!GO:0030521;androgen receptor signaling pathway;0.012053899996666!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0123552944205408!GO:0005869;dynactin complex;0.0128642701171176!GO:0046474;glycerophospholipid biosynthetic process;0.0128763384510416!GO:0044433;cytoplasmic vesicle part;0.0129420970933969!GO:0048660;regulation of smooth muscle cell proliferation;0.0129473611903571!GO:0051098;regulation of binding;0.0129473611903571!GO:0006695;cholesterol biosynthetic process;0.0130689347177811!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.013368158507584!GO:0006118;electron transport;0.0135714563328602!GO:0030660;Golgi-associated vesicle membrane;0.0136271179939985!GO:0016126;sterol biosynthetic process;0.0136727179618521!GO:0003682;chromatin binding;0.0142300620783!GO:0031902;late endosome membrane;0.0147683592982944!GO:0030176;integral to endoplasmic reticulum membrane;0.0148715609900125!GO:0006740;NADPH regeneration;0.0148715609900125!GO:0006098;pentose-phosphate shunt;0.0148715609900125!GO:0043086;negative regulation of catalytic activity;0.0150289749035174!GO:0022415;viral reproductive process;0.0150289749035174!GO:0006595;polyamine metabolic process;0.0152312150073787!GO:0042168;heme metabolic process;0.0153499414991751!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0161727186852239!GO:0043022;ribosome binding;0.0162870096703142!GO:0003746;translation elongation factor activity;0.0165198476635377!GO:0050662;coenzyme binding;0.0166003724050263!GO:0016481;negative regulation of transcription;0.0169941120826422!GO:0006268;DNA unwinding during replication;0.0170841750173329!GO:0044437;vacuolar part;0.0175811416730751!GO:0046467;membrane lipid biosynthetic process;0.0177095414193862!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.01823513842797!GO:0047485;protein N-terminus binding;0.0183490604111082!GO:0006405;RNA export from nucleus;0.0184966998002243!GO:0048500;signal recognition particle;0.0186882661503484!GO:0046822;regulation of nucleocytoplasmic transport;0.0187161550944887!GO:0022408;negative regulation of cell-cell adhesion;0.019016939992417!GO:0004177;aminopeptidase activity;0.0192502669352159!GO:0031901;early endosome membrane;0.0192502669352159!GO:0007162;negative regulation of cell adhesion;0.0193180836584681!GO:0000049;tRNA binding;0.0193180836584681!GO:0008022;protein C-terminus binding;0.0197843774101445!GO:0030833;regulation of actin filament polymerization;0.0201641560065897!GO:0009303;rRNA transcription;0.0201641560065897!GO:0005099;Ras GTPase activator activity;0.0204449996040033!GO:0005832;chaperonin-containing T-complex;0.020508897426609!GO:0006289;nucleotide-excision repair;0.0207757649666375!GO:0051539;4 iron, 4 sulfur cluster binding;0.0213058285245378!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0217899401055357!GO:0043433;negative regulation of transcription factor activity;0.022590857407395!GO:0006082;organic acid metabolic process;0.022590857407395!GO:0006417;regulation of translation;0.0228043764132174!GO:0008094;DNA-dependent ATPase activity;0.0228043764132174!GO:0032507;maintenance of cellular protein localization;0.0228043764132174!GO:0001953;negative regulation of cell-matrix adhesion;0.0229092619479656!GO:0046489;phosphoinositide biosynthetic process;0.023234145377369!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0233219065901694!GO:0000096;sulfur amino acid metabolic process;0.0233818738507975!GO:0019752;carboxylic acid metabolic process;0.0236434948880477!GO:0005092;GDP-dissociation inhibitor activity;0.02369693505!GO:0030119;AP-type membrane coat adaptor complex;0.024147578345669!GO:0016408;C-acyltransferase activity;0.0241978555977835!GO:0019904;protein domain specific binding;0.0242481898398137!GO:0051128;regulation of cellular component organization and biogenesis;0.0244212556899361!GO:0008629;induction of apoptosis by intracellular signals;0.0250422662646038!GO:0012506;vesicle membrane;0.0251080081253434!GO:0006779;porphyrin biosynthetic process;0.0251785584010769!GO:0033014;tetrapyrrole biosynthetic process;0.0251785584010769!GO:0045879;negative regulation of smoothened signaling pathway;0.025625976666322!GO:0045926;negative regulation of growth;0.026300618599812!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0264982596769914!GO:0005765;lysosomal membrane;0.0277007467662108!GO:0005657;replication fork;0.0277370354387296!GO:0016311;dephosphorylation;0.0279509846494576!GO:0008250;oligosaccharyl transferase complex;0.0285282749982609!GO:0031124;mRNA 3'-end processing;0.0291161750262439!GO:0008234;cysteine-type peptidase activity;0.0291399056622655!GO:0004722;protein serine/threonine phosphatase activity;0.0291573805935017!GO:0005669;transcription factor TFIID complex;0.0292422828227769!GO:0008180;signalosome;0.0300026408257636!GO:0019222;regulation of metabolic process;0.0300037219287294!GO:0005100;Rho GTPase activator activity;0.0305707096270883!GO:0032940;secretion by cell;0.0312330727370528!GO:0045185;maintenance of protein localization;0.0324087387031672!GO:0007021;tubulin folding;0.0324766804900782!GO:0008538;proteasome activator activity;0.0327984799356629!GO:0048659;smooth muscle cell proliferation;0.0328574230884445!GO:0030131;clathrin adaptor complex;0.0330663680732523!GO:0004576;oligosaccharyl transferase activity;0.0330970888845657!GO:0008287;protein serine/threonine phosphatase complex;0.0331079980734759!GO:0016791;phosphoric monoester hydrolase activity;0.0333162297017998!GO:0051270;regulation of cell motility;0.0336343086308674!GO:0050178;phenylpyruvate tautomerase activity;0.0338576576211307!GO:0006650;glycerophospholipid metabolic process;0.0343024380045867!GO:0000775;chromosome, pericentric region;0.0344678933059205!GO:0031529;ruffle organization and biogenesis;0.0345086766485087!GO:0035035;histone acetyltransferase binding;0.0346072918575832!GO:0009112;nucleobase metabolic process;0.034778918233165!GO:0043281;regulation of caspase activity;0.0349555144611676!GO:0006979;response to oxidative stress;0.0353580155061688!GO:0030032;lamellipodium biogenesis;0.0353580155061688!GO:0043189;H4/H2A histone acetyltransferase complex;0.0353607986286607!GO:0006607;NLS-bearing substrate import into nucleus;0.035582387397857!GO:0030518;steroid hormone receptor signaling pathway;0.035582387397857!GO:0031272;regulation of pseudopodium formation;0.035582387397857!GO:0031269;pseudopodium formation;0.035582387397857!GO:0031344;regulation of cell projection organization and biogenesis;0.035582387397857!GO:0031268;pseudopodium organization and biogenesis;0.035582387397857!GO:0031346;positive regulation of cell projection organization and biogenesis;0.035582387397857!GO:0031274;positive regulation of pseudopodium formation;0.035582387397857!GO:0040011;locomotion;0.0357349978077427!GO:0008637;apoptotic mitochondrial changes;0.0358043756536044!GO:0003678;DNA helicase activity;0.0358043756536044!GO:0000123;histone acetyltransferase complex;0.0359447482657902!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0364722013536979!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0370333345957854!GO:0022406;membrane docking;0.0370441298318123!GO:0048278;vesicle docking;0.0370441298318123!GO:0050811;GABA receptor binding;0.0373000499156447!GO:0007040;lysosome organization and biogenesis;0.0374398243798111!GO:0030031;cell projection biogenesis;0.0375457487278856!GO:0006919;caspase activation;0.0378236295585326!GO:0004680;casein kinase activity;0.0384298677139214!GO:0043407;negative regulation of MAP kinase activity;0.0384298677139214!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0388032156928051!GO:0051651;maintenance of cellular localization;0.0389263020022467!GO:0007033;vacuole organization and biogenesis;0.0389723498058954!GO:0006284;base-excision repair;0.0391609291216721!GO:0051287;NAD binding;0.0391609291216721!GO:0003690;double-stranded DNA binding;0.0395974658575553!GO:0006354;RNA elongation;0.0396318916634563!GO:0051059;NF-kappaB binding;0.0402547202128974!GO:0031301;integral to organelle membrane;0.0406976102430645!GO:0008312;7S RNA binding;0.0408989122025538!GO:0045334;clathrin-coated endocytic vesicle;0.0415215232474563!GO:0030496;midbody;0.0416206072471058!GO:0000339;RNA cap binding;0.0422325937361755!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0422325937361755!GO:0035267;NuA4 histone acetyltransferase complex;0.0422325937361755!GO:0008610;lipid biosynthetic process;0.0423679846773786!GO:0007346;regulation of progression through mitotic cell cycle;0.0435026266731333!GO:0016251;general RNA polymerase II transcription factor activity;0.0437576619153008!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0437576619153008!GO:0040012;regulation of locomotion;0.0437576619153008!GO:0005856;cytoskeleton;0.0438981348217284!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0441381484263435!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0441381484263435!GO:0009893;positive regulation of metabolic process;0.0441381484263435!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0441381484263435!GO:0045047;protein targeting to ER;0.0441381484263435!GO:0030384;phosphoinositide metabolic process;0.0441823265497433!GO:0006904;vesicle docking during exocytosis;0.0443776476514608!GO:0043065;positive regulation of apoptosis;0.0446198472937158!GO:0031326;regulation of cellular biosynthetic process;0.0446198472937158!GO:0030911;TPR domain binding;0.0451264360734179!GO:0051336;regulation of hydrolase activity;0.0454845995367929!GO:0050681;androgen receptor binding;0.0454845995367929!GO:0018196;peptidyl-asparagine modification;0.0454845995367929!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0454845995367929!GO:0009116;nucleoside metabolic process;0.0454845995367929!GO:0005784;translocon complex;0.0457379536493181!GO:0006376;mRNA splice site selection;0.0457379536493181!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0457379536493181!GO:0009889;regulation of biosynthetic process;0.0457379536493181!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0457379536493181!GO:0006458;'de novo' protein folding;0.0458759729091377!GO:0051084;'de novo' posttranslational protein folding;0.0458759729091377!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0470862679830653!GO:0030145;manganese ion binding;0.0470873328013262!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0472405030064316!GO:0032984;macromolecular complex disassembly;0.0475205367436895!GO:0019206;nucleoside kinase activity;0.0481003791305137!GO:0005758;mitochondrial intermembrane space;0.0481003791305137!GO:0030913;paranodal junction assembly;0.0481964907458241!GO:0032288;myelin formation;0.0481964907458241!GO:0043624;cellular protein complex disassembly;0.0481964907458241!GO:0006497;protein amino acid lipidation;0.0481964907458241!GO:0043068;positive regulation of programmed cell death;0.048273843181131!GO:0046426;negative regulation of JAK-STAT cascade;0.0483286876755095!GO:0043241;protein complex disassembly;0.0487551540536482!GO:0006338;chromatin remodeling;0.0491595261564541!GO:0006378;mRNA polyadenylation;0.0494259115529539 | |||
|sample_id=11412 | |sample_id=11412 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=aorta | |sample_tissue=aorta | ||
|top_motifs=SOX{8,9,10}:1.69584190846;RXR{A,B,G}:1.51965866473;TLX1..3_NFIC{dimer}:1.29404413761;AR:1.28827320392;PAX6:1.17159255512;TFAP2{A,C}:1.16010954708;POU3F1..4:1.15335240253;SOX2:1.14455126399;NFATC1..3:1.13667887766;GATA6:1.10067122665;LEF1_TCF7_TCF7L1,2:0.954577749485;ZNF148:0.886238460518;bHLH_family:0.874179528381;ADNP_IRX_SIX_ZHX:0.848579004643;TFAP4:0.793476448176;STAT5{A,B}:0.712784808157;SOX17:0.672030260447;TP53:0.663570412708;ONECUT1,2:0.656030296983;PAX8:0.64187265427;ETS1,2:0.632781222076;FOX{I1,J2}:0.623587875715;RORA:0.621377534861;ARID5B:0.608118241227;NANOG:0.604421793838;LHX3,4:0.598778536372;SOX5:0.589602495876;HIC1:0.585227414494;IKZF1:0.563703119149;PAX1,9:0.54615818905;CRX:0.528313592348;GLI1..3:0.527075456108;MTE{core}:0.521542136732;NR3C1:0.483315698634;TFAP2B:0.472982452943;CDC5L:0.458499638099;GFI1B:0.454682197656;PPARG:0.426835686553;HOX{A5,B5}:0.422833390569;ZFP161:0.414341293843;SPIB:0.414201044917;SP1:0.393223350106;GTF2A1,2:0.351353863823;BACH2:0.349706694451;HES1:0.336421768256;TEAD1:0.325951261733;NFE2:0.291844617956;TFDP1:0.288320284048;ALX1:0.27062269721;NFE2L1:0.261264642138;REST:0.258998094092;ELF1,2,4:0.25341148201;XCPE1{core}:0.230887711779;SMAD1..7,9:0.226693216516;NFE2L2:0.221287682348;FOS_FOS{B,L1}_JUN{B,D}:0.2028479176;EGR1..3:0.167495012005;PAX5:0.163865205471;HAND1,2:0.159652324737;SPZ1:0.156222039908;FOSL2:0.146041524047;MED-1{core}:0.135631318659;POU6F1:0.131460189379;PITX1..3:0.118949648924;HBP1_HMGB_SSRP1_UBTF:0.105021035152;ZNF238:0.0909979019978;POU1F1:0.0838666881931;GCM1,2:0.0653741583523;SRF:0.0545047758544;NHLH1,2:0.0516237425985;EBF1:0.0332893115598;GTF2I:0.0303577652484;TBP:0.0232716268828;IKZF2:0.019993277055;MYOD1:0.0152884199478;HNF4A_NR2F1,2:0.00991536677889;ATF6:0.00502226723262;TLX2:0.00496538460717;FOXA2:0.00198862218369;FOXL1:-0.00160455912676;MAZ:-0.0131023210396;ZBTB6:-0.0141597343752;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0161144280125;TEF:-0.0205613072589;SPI1:-0.0494582706549;NKX2-2,8:-0.0655123825574;MTF1:-0.07474107651;LMO2:-0.0811246709937;STAT2,4,6:-0.0823773015207;ZNF423:-0.0903332871872;NFIX:-0.0971188201028;GZF1:-0.105206029542;PAX2:-0.107075946161;MYB:-0.109303105413;E2F1..5:-0.12036535209;ZIC1..3:-0.144045751372;HOXA9_MEIS1:-0.154524800585;UFEwm:-0.186914047064;HNF1A:-0.188403489695;GATA4:-0.188620004644;T:-0.191274716203;JUN:-0.198055046661;ZNF143:-0.200938032184;NR5A1,2:-0.230103916853;PRRX1,2:-0.237858392984;ESRRA:-0.246118361041;GFI1:-0.246227491192;EN1,2:-0.248762727475;CUX2:-0.251154852624;OCT4_SOX2{dimer}:-0.252795868083;HLF:-0.253596764215;MYFfamily:-0.264267741046;PAX3,7:-0.268409245484;PBX1:-0.27133652365;PATZ1:-0.27604415631;NRF1:-0.293164798873;YY1:-0.307078918309;TAL1_TCF{3,4,12}:-0.308943994314;MZF1:-0.309788741532;POU2F1..3:-0.325378461767;TGIF1:-0.326071770651;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.333973994161;HMGA1,2:-0.349576426789;NFKB1_REL_RELA:-0.357723957852;FOX{F1,F2,J1}:-0.364981179524;HOX{A6,A7,B6,B7}:-0.367471063233;FOXQ1:-0.376028059697;MEF2{A,B,C,D}:-0.387489653846;BREu{core}:-0.394649898757;TFCP2:-0.401576578978;RFX1:-0.430135468983;FOXD3:-0.436343943904;ZEB1:-0.444732561057;NKX3-2:-0.445085802811;NANOG{mouse}:-0.445737812821;PRDM1:-0.462937955323;PAX4:-0.466273220559;SREBF1,2:-0.4707088085;FOX{D1,D2}:-0.474861993724;NFY{A,B,C}:-0.491813090224;KLF4:-0.510700323969;CEBPA,B_DDIT3:-0.523224901769;AIRE:-0.53026103971;DMAP1_NCOR{1,2}_SMARC:-0.532029431799;HMX1:-0.536811236457;RUNX1..3:-0.568623325631;SNAI1..3:-0.598273323847;VSX1,2:-0.630124017759;NFIL3:-0.638300410911;CREB1:-0.650494783369;RBPJ:-0.672363732743;RREB1:-0.67341470547;NKX2-3_NKX2-5:-0.690097655483;AHR_ARNT_ARNT2:-0.691253465342;IRF7:-0.692091282759;IRF1,2:-0.714590643177;FOXM1:-0.720282679463;RFX2..5_RFXANK_RFXAP:-0.731159756166;EP300:-0.735241557875;MAFB:-0.739621168554;ZNF384:-0.74929929933;FOXO1,3,4:-0.765962882651;FOXN1:-0.773619714727;POU5F1:-0.783768774942;BPTF:-0.792751333963;ZBTB16:-0.796425339227;FOXP3:-0.80960779524;TBX4,5:-0.811398169847;ESR1:-0.81356505175;ATF2:-0.816029577402;HIF1A:-0.822136965505;ELK1,4_GABP{A,B1}:-0.852291478367;NR1H4:-0.867824361102;EVI1:-0.877059060726;MYBL2:-0.909398667182;TOPORS:-0.933504726197;ATF4:-0.983722098421;STAT1,3:-0.993342354793;RXRA_VDR{dimer}:-1.01268970605;XBP1:-1.01360311547;ATF5_CREB3:-1.06353385991;DBP:-1.06368804869;ALX4:-1.10498372182;NR6A1:-1.13216709882;PDX1:-1.17407212082;HSF1,2:-1.18915066935;HOX{A4,D4}:-1.22213179994;FOXP1:-1.30529060015;CDX1,2,4:-1.38080236036;NKX2-1,4:-1.48227122745;NKX6-1,2:-1.63538678086;NKX3-1:-2.06889818297 | |top_motifs=SOX{8,9,10}:1.69584190846;RXR{A,B,G}:1.51965866473;TLX1..3_NFIC{dimer}:1.29404413761;AR:1.28827320392;PAX6:1.17159255512;TFAP2{A,C}:1.16010954708;POU3F1..4:1.15335240253;SOX2:1.14455126399;NFATC1..3:1.13667887766;GATA6:1.10067122665;LEF1_TCF7_TCF7L1,2:0.954577749485;ZNF148:0.886238460518;bHLH_family:0.874179528381;ADNP_IRX_SIX_ZHX:0.848579004643;TFAP4:0.793476448176;STAT5{A,B}:0.712784808157;SOX17:0.672030260447;TP53:0.663570412708;ONECUT1,2:0.656030296983;PAX8:0.64187265427;ETS1,2:0.632781222076;FOX{I1,J2}:0.623587875715;RORA:0.621377534861;ARID5B:0.608118241227;NANOG:0.604421793838;LHX3,4:0.598778536372;SOX5:0.589602495876;HIC1:0.585227414494;IKZF1:0.563703119149;PAX1,9:0.54615818905;CRX:0.528313592348;GLI1..3:0.527075456108;MTE{core}:0.521542136732;NR3C1:0.483315698634;TFAP2B:0.472982452943;CDC5L:0.458499638099;GFI1B:0.454682197656;PPARG:0.426835686553;HOX{A5,B5}:0.422833390569;ZFP161:0.414341293843;SPIB:0.414201044917;SP1:0.393223350106;GTF2A1,2:0.351353863823;BACH2:0.349706694451;HES1:0.336421768256;TEAD1:0.325951261733;NFE2:0.291844617956;TFDP1:0.288320284048;ALX1:0.27062269721;NFE2L1:0.261264642138;REST:0.258998094092;ELF1,2,4:0.25341148201;XCPE1{core}:0.230887711779;SMAD1..7,9:0.226693216516;NFE2L2:0.221287682348;FOS_FOS{B,L1}_JUN{B,D}:0.2028479176;EGR1..3:0.167495012005;PAX5:0.163865205471;HAND1,2:0.159652324737;SPZ1:0.156222039908;FOSL2:0.146041524047;MED-1{core}:0.135631318659;POU6F1:0.131460189379;PITX1..3:0.118949648924;HBP1_HMGB_SSRP1_UBTF:0.105021035152;ZNF238:0.0909979019978;POU1F1:0.0838666881931;GCM1,2:0.0653741583523;SRF:0.0545047758544;NHLH1,2:0.0516237425985;EBF1:0.0332893115598;GTF2I:0.0303577652484;TBP:0.0232716268828;IKZF2:0.019993277055;MYOD1:0.0152884199478;HNF4A_NR2F1,2:0.00991536677889;ATF6:0.00502226723262;TLX2:0.00496538460717;FOXA2:0.00198862218369;FOXL1:-0.00160455912676;MAZ:-0.0131023210396;ZBTB6:-0.0141597343752;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0161144280125;TEF:-0.0205613072589;SPI1:-0.0494582706549;NKX2-2,8:-0.0655123825574;MTF1:-0.07474107651;LMO2:-0.0811246709937;STAT2,4,6:-0.0823773015207;ZNF423:-0.0903332871872;NFIX:-0.0971188201028;GZF1:-0.105206029542;PAX2:-0.107075946161;MYB:-0.109303105413;E2F1..5:-0.12036535209;ZIC1..3:-0.144045751372;HOXA9_MEIS1:-0.154524800585;UFEwm:-0.186914047064;HNF1A:-0.188403489695;GATA4:-0.188620004644;T:-0.191274716203;JUN:-0.198055046661;ZNF143:-0.200938032184;NR5A1,2:-0.230103916853;PRRX1,2:-0.237858392984;ESRRA:-0.246118361041;GFI1:-0.246227491192;EN1,2:-0.248762727475;CUX2:-0.251154852624;OCT4_SOX2{dimer}:-0.252795868083;HLF:-0.253596764215;MYFfamily:-0.264267741046;PAX3,7:-0.268409245484;PBX1:-0.27133652365;PATZ1:-0.27604415631;NRF1:-0.293164798873;YY1:-0.307078918309;TAL1_TCF{3,4,12}:-0.308943994314;MZF1:-0.309788741532;POU2F1..3:-0.325378461767;TGIF1:-0.326071770651;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.333973994161;HMGA1,2:-0.349576426789;NFKB1_REL_RELA:-0.357723957852;FOX{F1,F2,J1}:-0.364981179524;HOX{A6,A7,B6,B7}:-0.367471063233;FOXQ1:-0.376028059697;MEF2{A,B,C,D}:-0.387489653846;BREu{core}:-0.394649898757;TFCP2:-0.401576578978;RFX1:-0.430135468983;FOXD3:-0.436343943904;ZEB1:-0.444732561057;NKX3-2:-0.445085802811;NANOG{mouse}:-0.445737812821;PRDM1:-0.462937955323;PAX4:-0.466273220559;SREBF1,2:-0.4707088085;FOX{D1,D2}:-0.474861993724;NFY{A,B,C}:-0.491813090224;KLF4:-0.510700323969;CEBPA,B_DDIT3:-0.523224901769;AIRE:-0.53026103971;DMAP1_NCOR{1,2}_SMARC:-0.532029431799;HMX1:-0.536811236457;RUNX1..3:-0.568623325631;SNAI1..3:-0.598273323847;VSX1,2:-0.630124017759;NFIL3:-0.638300410911;CREB1:-0.650494783369;RBPJ:-0.672363732743;RREB1:-0.67341470547;NKX2-3_NKX2-5:-0.690097655483;AHR_ARNT_ARNT2:-0.691253465342;IRF7:-0.692091282759;IRF1,2:-0.714590643177;FOXM1:-0.720282679463;RFX2..5_RFXANK_RFXAP:-0.731159756166;EP300:-0.735241557875;MAFB:-0.739621168554;ZNF384:-0.74929929933;FOXO1,3,4:-0.765962882651;FOXN1:-0.773619714727;POU5F1:-0.783768774942;BPTF:-0.792751333963;ZBTB16:-0.796425339227;FOXP3:-0.80960779524;TBX4,5:-0.811398169847;ESR1:-0.81356505175;ATF2:-0.816029577402;HIF1A:-0.822136965505;ELK1,4_GABP{A,B1}:-0.852291478367;NR1H4:-0.867824361102;EVI1:-0.877059060726;MYBL2:-0.909398667182;TOPORS:-0.933504726197;ATF4:-0.983722098421;STAT1,3:-0.993342354793;RXRA_VDR{dimer}:-1.01268970605;XBP1:-1.01360311547;ATF5_CREB3:-1.06353385991;DBP:-1.06368804869;ALX4:-1.10498372182;NR6A1:-1.13216709882;PDX1:-1.17407212082;HSF1,2:-1.18915066935;HOX{A4,D4}:-1.22213179994;FOXP1:-1.30529060015;CDX1,2,4:-1.38080236036;NKX2-1,4:-1.48227122745;NKX6-1,2:-1.63538678086;NKX3-1:-2.06889818297 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11412-118E8;search_select_hide=table117:FF:11412-118E8 | |||
}} | }} | ||
Latest revision as of 17:59, 4 June 2020
| Name: | Endothelial Cells - Aortic, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12022 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12022
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12022
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.503 |
| 10 | 10 | 0.0223 |
| 100 | 100 | 0.521 |
| 101 | 101 | 0.171 |
| 102 | 102 | 0.447 |
| 103 | 103 | 0.865 |
| 104 | 104 | 0.851 |
| 105 | 105 | 0.447 |
| 106 | 106 | 0.102 |
| 107 | 107 | 0.018 |
| 108 | 108 | 0.336 |
| 109 | 109 | 0.525 |
| 11 | 11 | 0.295 |
| 110 | 110 | 0.25 |
| 111 | 111 | 0.851 |
| 112 | 112 | 0.677 |
| 113 | 113 | 0.384 |
| 114 | 114 | 0.297 |
| 115 | 115 | 0.575 |
| 116 | 116 | 0.948 |
| 117 | 117 | 0.133 |
| 118 | 118 | 0.97 |
| 119 | 119 | 0.423 |
| 12 | 12 | 0.667 |
| 120 | 120 | 0.189 |
| 121 | 121 | 0.25 |
| 122 | 122 | 0.426 |
| 123 | 123 | 0.0254 |
| 124 | 124 | 0.103 |
| 125 | 125 | 0.631 |
| 126 | 126 | 0.976 |
| 127 | 127 | 0.93 |
| 128 | 128 | 0.228 |
| 129 | 129 | 0.944 |
| 13 | 13 | 0.365 |
| 130 | 130 | 0.699 |
| 131 | 131 | 0.761 |
| 132 | 132 | 0.828 |
| 133 | 133 | 0.906 |
| 134 | 134 | 0.983 |
| 135 | 135 | 0.125 |
| 136 | 136 | 0.426 |
| 137 | 137 | 0.135 |
| 138 | 138 | 0.52 |
| 139 | 139 | 0.265 |
| 14 | 14 | 0.829 |
| 140 | 140 | 0.798 |
| 141 | 141 | 0.33 |
| 142 | 142 | 0.922 |
| 143 | 143 | 0.022 |
| 144 | 144 | 0.169 |
| 145 | 145 | 0.113 |
| 146 | 146 | 0.0269 |
| 147 | 147 | 0.0843 |
| 148 | 148 | 0.257 |
| 149 | 149 | 0.137 |
| 15 | 15 | 0.373 |
| 150 | 150 | 0.241 |
| 151 | 151 | 0.875 |
| 152 | 152 | 0.0112 |
| 153 | 153 | 0.0833 |
| 154 | 154 | 0.359 |
| 155 | 155 | 0.591 |
| 156 | 156 | 0.239 |
| 157 | 157 | 0.512 |
| 158 | 158 | 0.128 |
| 159 | 159 | 0.886 |
| 16 | 16 | 0.98 |
| 160 | 160 | 0.082 |
| 161 | 161 | 0.235 |
| 162 | 162 | 0.911 |
| 163 | 163 | 0.655 |
| 164 | 164 | 0.949 |
| 165 | 165 | 0.555 |
| 166 | 166 | 0.82 |
| 167 | 167 | 0.248 |
| 168 | 168 | 0.159 |
| 169 | 169 | 0.386 |
| 17 | 17 | 0.534 |
| 18 | 18 | 0.777 |
| 19 | 19 | 0.631 |
| 2 | 2 | 0.668 |
| 20 | 20 | 0.607 |
| 21 | 21 | 0.489 |
| 22 | 22 | 0.431 |
| 23 | 23 | 0.32 |
| 24 | 24 | 0.395 |
| 25 | 25 | 0.551 |
| 26 | 26 | 0.699 |
| 27 | 27 | 0.396 |
| 28 | 28 | 0.0837 |
| 29 | 29 | 0.419 |
| 3 | 3 | 0.599 |
| 30 | 30 | 0.615 |
| 31 | 31 | 0.953 |
| 32 | 32 | 0.137 |
| 33 | 33 | 0.463 |
| 34 | 34 | 0.148 |
| 35 | 35 | 0.451 |
| 36 | 36 | 0.473 |
| 37 | 37 | 0.891 |
| 38 | 38 | 0.407 |
| 39 | 39 | 0.521 |
| 4 | 4 | 0.777 |
| 40 | 40 | 0.136 |
| 41 | 41 | 0.102 |
| 42 | 42 | 0.752 |
| 43 | 43 | 0.783 |
| 44 | 44 | 0.333 |
| 45 | 45 | 0.109 |
| 46 | 46 | 0.517 |
| 47 | 47 | 0.684 |
| 48 | 48 | 0.135 |
| 49 | 49 | 0.734 |
| 5 | 5 | 0.903 |
| 50 | 50 | 0.938 |
| 51 | 51 | 0.917 |
| 52 | 52 | 0.954 |
| 53 | 53 | 0.243 |
| 54 | 54 | 0.996 |
| 55 | 55 | 0.523 |
| 56 | 56 | 0.67 |
| 57 | 57 | 0.205 |
| 58 | 58 | 0.135 |
| 59 | 59 | 0.22 |
| 6 | 6 | 0.127 |
| 60 | 60 | 0.778 |
| 61 | 61 | 0.65 |
| 62 | 62 | 0.685 |
| 63 | 63 | 0.605 |
| 64 | 64 | 0.991 |
| 65 | 65 | 0.271 |
| 66 | 66 | 0.19 |
| 67 | 67 | 0.799 |
| 68 | 68 | 0.227 |
| 69 | 69 | 0.132 |
| 7 | 7 | 0.711 |
| 70 | 70 | 0.923 |
| 71 | 71 | 0.177 |
| 72 | 72 | 0.269 |
| 73 | 73 | 0.00165 |
| 74 | 74 | 0.0832 |
| 75 | 75 | 0.454 |
| 76 | 76 | 0.319 |
| 77 | 77 | 0.69 |
| 78 | 78 | 0.715 |
| 79 | 79 | 0.795 |
| 8 | 8 | 0.0172 |
| 80 | 80 | 0.242 |
| 81 | 81 | 0.614 |
| 82 | 82 | 0.946 |
| 83 | 83 | 0.945 |
| 84 | 84 | 0.266 |
| 85 | 85 | 0.582 |
| 86 | 86 | 0.98 |
| 87 | 87 | 0.1 |
| 88 | 88 | 0.645 |
| 89 | 89 | 0.939 |
| 9 | 9 | 0.395 |
| 90 | 90 | 0.285 |
| 91 | 91 | 0.321 |
| 92 | 92 | 0.395 |
| 93 | 93 | 0.72 |
| 94 | 94 | 0.491 |
| 95 | 95 | 0.25 |
| 96 | 96 | 0.383 |
| 97 | 97 | 0.355 |
| 98 | 98 | 0.294 |
| 99 | 99 | 0.0164 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12022
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000048 human endothelial cell of the aorta sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)
0002544 (aortic endothelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0004573 (systemic artery)
0000487 (simple squamous epithelium)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000048 (human endothelial cell of the aorta sample)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)
