FF:10744-110C6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005729 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX007955;DRR008827;DRZ000252;DRZ001637;DRZ011602;DRZ012987 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000084 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:0060058,DOID:0060060,DOID:14566,DOID:0060083,DOID:0060061,DOID:8691 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100104,FF:0103212 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100104 | |fonse_cell_line=FF:0100104 | ||
|fonse_cell_line_closure=FF:0100104 | |fonse_cell_line_closure=FF:0100104 | ||
Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mycosis%2520fungoides%252c%2520T%2520cell%2520lymphoma%2520cell%2520line%253aHuT%2520102%2520TIB-162.CNhs11858.10744-110C6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mycosis%2520fungoides%252c%2520T%2520cell%2520lymphoma%2520cell%2520line%253aHuT%2520102%2520TIB-162.CNhs11858.10744-110C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mycosis%2520fungoides%252c%2520T%2520cell%2520lymphoma%2520cell%2520line%253aHuT%2520102%2520TIB-162.CNhs11858.10744-110C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mycosis%2520fungoides%252c%2520T%2520cell%2520lymphoma%2520cell%2520line%253aHuT%2520102%2520TIB-162.CNhs11858.10744-110C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mycosis%2520fungoides%252c%2520T%2520cell%2520lymphoma%2520cell%2520line%253aHuT%2520102%2520TIB-162.CNhs11858.10744-110C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10744-110C6 | |id=FF:10744-110C6 | ||
|is_a=DOID:8691;;EFO:0002091;;FF: | |is_a=DOID:8691;;EFO:0002091;;FF:0000210;;FF:0103212 | ||
|is_obsolete= | |||
|library_id=CNhs11858 | |||
|library_id_phase_based=2:CNhs11858 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10744 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10744 | |||
|name=mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162 | |name=mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11858,LSID830,release010,COMPLETED | |profile_hcage=CNhs11858,LSID830,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 78: | ||
|rna_weight_ug=33.82872 | |rna_weight_ug=33.82872 | ||
|sample_age=26 | |sample_age=26 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=TIB-162 | |sample_cell_catalog=TIB-162 | ||
|sample_cell_line=HuT 102 TIB-162 | |sample_cell_line=HuT 102 TIB-162 | ||
Line 69: | Line 91: | ||
|sample_ethnicity=B | |sample_ethnicity=B | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.04378534748452e-236!GO:0043227;membrane-bound organelle;1.02686655573884e-194!GO:0043231;intracellular membrane-bound organelle;2.00295406885861e-194!GO:0043226;organelle;3.15425814403069e-190!GO:0043229;intracellular organelle;8.04813864381078e-190!GO:0005737;cytoplasm;5.89715017355182e-178!GO:0044422;organelle part;5.80896065868169e-157!GO:0044446;intracellular organelle part;1.90703057888402e-155!GO:0032991;macromolecular complex;1.10882213665479e-130!GO:0044444;cytoplasmic part;1.13385673572914e-125!GO:0030529;ribonucleoprotein complex;3.25965388130706e-96!GO:0044237;cellular metabolic process;1.02444497877263e-94!GO:0044238;primary metabolic process;3.17915719574405e-92!GO:0005739;mitochondrion;1.99397977189163e-86!GO:0043170;macromolecule metabolic process;2.65213462957741e-86!GO:0044428;nuclear part;2.97755784615242e-85!GO:0043233;organelle lumen;2.14593003612258e-82!GO:0031974;membrane-enclosed lumen;2.14593003612258e-82!GO:0003723;RNA binding;5.58859852896506e-82!GO:0005515;protein binding;1.69556359465745e-81!GO:0005634;nucleus;6.26605888770052e-81!GO:0043234;protein complex;3.25234090404596e-71!GO:0006412;translation;5.11140365096979e-61!GO:0044429;mitochondrial part;6.0006204214003e-58!GO:0019538;protein metabolic process;1.00736851981722e-56!GO:0005840;ribosome;2.82115360270738e-56!GO:0006396;RNA processing;9.56360711774709e-55!GO:0043283;biopolymer metabolic process;2.16612725575263e-53!GO:0044267;cellular protein metabolic process;3.16767386303902e-51!GO:0044260;cellular macromolecule metabolic process;4.22334493171805e-51!GO:0031981;nuclear lumen;1.52760439029394e-50!GO:0031967;organelle envelope;3.0992140084138e-49!GO:0031975;envelope;8.1223840248152e-49!GO:0031090;organelle membrane;1.21757998885627e-48!GO:0003735;structural constituent of ribosome;2.09234066979953e-48!GO:0044249;cellular biosynthetic process;2.10935507475634e-45!GO:0016071;mRNA metabolic process;2.44691409469216e-45!GO:0009058;biosynthetic process;5.22977397367118e-45!GO:0009059;macromolecule biosynthetic process;6.90419127450709e-45!GO:0006259;DNA metabolic process;2.7544228345216e-44!GO:0016043;cellular component organization and biogenesis;7.57836369226406e-44!GO:0033036;macromolecule localization;2.50679899033446e-43!GO:0033279;ribosomal subunit;2.07469980368946e-42!GO:0015031;protein transport;2.34851929605752e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.73527350483885e-41!GO:0006996;organelle organization and biogenesis;1.14090435630787e-40!GO:0045184;establishment of protein localization;4.08182962753637e-40!GO:0008380;RNA splicing;9.32947177117823e-40!GO:0008104;protein localization;9.37623310619696e-40!GO:0005829;cytosol;1.02458978543266e-39!GO:0010467;gene expression;1.61377899499094e-38!GO:0006397;mRNA processing;7.42089590040557e-38!GO:0007049;cell cycle;7.51311302342494e-37!GO:0046907;intracellular transport;7.51311302342494e-37!GO:0005740;mitochondrial envelope;1.43055593215066e-36!GO:0065003;macromolecular complex assembly;2.92903465486358e-36!GO:0000166;nucleotide binding;2.80317670937574e-35!GO:0043228;non-membrane-bound organelle;8.44123355641736e-35!GO:0043232;intracellular non-membrane-bound organelle;8.44123355641736e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.62409233909118e-34!GO:0019866;organelle inner membrane;2.2276287015148e-34!GO:0031966;mitochondrial membrane;2.72901944645302e-34!GO:0005654;nucleoplasm;1.37114172470034e-32!GO:0005743;mitochondrial inner membrane;1.16099704094734e-31!GO:0022607;cellular component assembly;2.92994528881324e-31!GO:0022402;cell cycle process;6.70051118962241e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.45857377026598e-29!GO:0006886;intracellular protein transport;1.61030256720905e-29!GO:0005681;spliceosome;5.16913694102317e-29!GO:0051641;cellular localization;2.56915485385746e-28!GO:0051649;establishment of cellular localization;4.77955423613788e-28!GO:0006915;apoptosis;8.2611293024985e-28!GO:0012501;programmed cell death;8.65879373180396e-28!GO:0006974;response to DNA damage stimulus;2.91067374655395e-27!GO:0032553;ribonucleotide binding;3.15809656788032e-27!GO:0032555;purine ribonucleotide binding;3.15809656788032e-27!GO:0044445;cytosolic part;1.14466636975995e-26!GO:0017076;purine nucleotide binding;2.63660374817416e-26!GO:0031980;mitochondrial lumen;2.93034167907981e-26!GO:0005759;mitochondrial matrix;2.93034167907981e-26!GO:0008219;cell death;8.6674398758296e-26!GO:0016265;death;8.6674398758296e-26!GO:0000278;mitotic cell cycle;1.82459123687774e-25!GO:0005694;chromosome;5.40583301745792e-25!GO:0044451;nucleoplasm part;5.85250217228138e-25!GO:0016462;pyrophosphatase activity;7.19861008589814e-24!GO:0006119;oxidative phosphorylation;7.69228447014547e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.94975006364937e-24!GO:0017111;nucleoside-triphosphatase activity;8.19332262898254e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.01390203370378e-23!GO:0005524;ATP binding;4.13095443351401e-23!GO:0003676;nucleic acid binding;5.37345189000639e-23!GO:0044455;mitochondrial membrane part;7.18535314817153e-23!GO:0006281;DNA repair;1.01974839734981e-22!GO:0015935;small ribosomal subunit;1.26634340906661e-22!GO:0032559;adenyl ribonucleotide binding;1.51678222751102e-22!GO:0044427;chromosomal part;2.45121632271771e-22!GO:0008134;transcription factor binding;1.49121239655299e-21!GO:0022403;cell cycle phase;1.71140847382181e-21!GO:0030554;adenyl nucleotide binding;1.88005433001754e-21!GO:0015934;large ribosomal subunit;4.85161970941524e-21!GO:0043412;biopolymer modification;5.46396077408037e-21!GO:0006512;ubiquitin cycle;5.52706919528193e-21!GO:0022618;protein-RNA complex assembly;5.14265391263925e-20!GO:0044265;cellular macromolecule catabolic process;6.13711719173023e-20!GO:0051276;chromosome organization and biogenesis;8.74919216405194e-20!GO:0016874;ligase activity;1.49952003875975e-19!GO:0000087;M phase of mitotic cell cycle;3.93288510349057e-19!GO:0005730;nucleolus;5.01748209531391e-19!GO:0007067;mitosis;7.75100872084492e-19!GO:0005746;mitochondrial respiratory chain;1.10524306125037e-18!GO:0012505;endomembrane system;1.15752413204683e-18!GO:0006464;protein modification process;1.2912024508077e-18!GO:0009719;response to endogenous stimulus;3.07543909188904e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.49380793956668e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.52815387935332e-17!GO:0043687;post-translational protein modification;1.57090145653395e-17!GO:0042981;regulation of apoptosis;1.70789648206643e-17!GO:0043067;regulation of programmed cell death;3.22444468970274e-17!GO:0005761;mitochondrial ribosome;4.71421703207426e-17!GO:0000313;organellar ribosome;4.71421703207426e-17!GO:0050136;NADH dehydrogenase (quinone) activity;6.61796868479948e-17!GO:0003954;NADH dehydrogenase activity;6.61796868479948e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.61796868479948e-17!GO:0044248;cellular catabolic process;1.04634803269061e-16!GO:0006260;DNA replication;1.06974312238506e-16!GO:0019941;modification-dependent protein catabolic process;1.11534874022121e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.11534874022121e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.11534874022121e-16!GO:0000279;M phase;1.38295261789639e-16!GO:0006511;ubiquitin-dependent protein catabolic process;2.69161751373205e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;3.05480645306173e-16!GO:0008135;translation factor activity, nucleic acid binding;3.28884568759569e-16!GO:0006457;protein folding;3.33181683414211e-16!GO:0051726;regulation of cell cycle;3.44204492545217e-16!GO:0044257;cellular protein catabolic process;3.47151891262086e-16!GO:0000074;regulation of progression through cell cycle;3.67118842265054e-16!GO:0043285;biopolymer catabolic process;4.8829808327707e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.32487042938032e-16!GO:0042623;ATPase activity, coupled;7.29647432274083e-16!GO:0009057;macromolecule catabolic process;1.1915127616018e-15!GO:0006323;DNA packaging;1.28369275803016e-15!GO:0016070;RNA metabolic process;1.5961798160875e-15!GO:0042254;ribosome biogenesis and assembly;2.01177348233969e-15!GO:0016887;ATPase activity;2.03192817805532e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.58276678823587e-15!GO:0042773;ATP synthesis coupled electron transport;2.58276678823587e-15!GO:0006605;protein targeting;3.12847856116041e-15!GO:0030964;NADH dehydrogenase complex (quinone);5.81837613890918e-15!GO:0045271;respiratory chain complex I;5.81837613890918e-15!GO:0005747;mitochondrial respiratory chain complex I;5.81837613890918e-15!GO:0051186;cofactor metabolic process;1.36504363022508e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.85164597868521e-14!GO:0051301;cell division;3.01626436043995e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.75014527240991e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.941800856732e-14!GO:0000375;RNA splicing, via transesterification reactions;3.941800856732e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.941800856732e-14!GO:0003712;transcription cofactor activity;4.22275679822857e-14!GO:0048770;pigment granule;4.3891378093788e-14!GO:0042470;melanosome;4.3891378093788e-14!GO:0005635;nuclear envelope;6.56498091372131e-14!GO:0006333;chromatin assembly or disassembly;1.00511039449767e-13!GO:0016604;nuclear body;1.62224024466932e-13!GO:0005783;endoplasmic reticulum;2.3152524014663e-13!GO:0044453;nuclear membrane part;2.69563580582341e-13!GO:0000785;chromatin;2.76648526156208e-13!GO:0051082;unfolded protein binding;3.34704462033945e-13!GO:0006413;translational initiation;3.65138295752413e-13!GO:0006793;phosphorus metabolic process;3.70247605124026e-13!GO:0006796;phosphate metabolic process;3.70247605124026e-13!GO:0044432;endoplasmic reticulum part;3.82947453967401e-13!GO:0003743;translation initiation factor activity;4.8011376933053e-13!GO:0006913;nucleocytoplasmic transport;1.28654719620698e-12!GO:0031965;nuclear membrane;1.52889610737352e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.78822452584695e-12!GO:0065004;protein-DNA complex assembly;2.36355028955375e-12!GO:0051169;nuclear transport;2.7449655401243e-12!GO:0030163;protein catabolic process;5.60932660656331e-12!GO:0006732;coenzyme metabolic process;1.36210336978287e-11!GO:0006446;regulation of translational initiation;1.96733500932633e-11!GO:0016310;phosphorylation;2.64648201841812e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.84324778338935e-11!GO:0005643;nuclear pore;3.35951098566109e-11!GO:0005789;endoplasmic reticulum membrane;3.5634164619001e-11!GO:0004386;helicase activity;4.97762408553193e-11!GO:0065002;intracellular protein transport across a membrane;8.72890154632388e-11!GO:0006364;rRNA processing;1.01545732985316e-10!GO:0006366;transcription from RNA polymerase II promoter;1.09769063398938e-10!GO:0016072;rRNA metabolic process;1.54931953434465e-10!GO:0006399;tRNA metabolic process;1.56577855054861e-10!GO:0009259;ribonucleotide metabolic process;1.67678397659431e-10!GO:0006334;nucleosome assembly;1.96883138184115e-10!GO:0048193;Golgi vesicle transport;2.00036626509277e-10!GO:0050657;nucleic acid transport;2.11771620437661e-10!GO:0051236;establishment of RNA localization;2.11771620437661e-10!GO:0050658;RNA transport;2.11771620437661e-10!GO:0043069;negative regulation of programmed cell death;2.26624870544924e-10!GO:0006163;purine nucleotide metabolic process;2.38971057417554e-10!GO:0006403;RNA localization;2.43107485384717e-10!GO:0007005;mitochondrion organization and biogenesis;2.51756703447998e-10!GO:0006916;anti-apoptosis;2.5955510167685e-10!GO:0048523;negative regulation of cellular process;2.65319151819516e-10!GO:0009055;electron carrier activity;2.65319151819516e-10!GO:0043566;structure-specific DNA binding;2.75959115724764e-10!GO:0043066;negative regulation of apoptosis;3.10492669757681e-10!GO:0031497;chromatin assembly;3.71662939491036e-10!GO:0003697;single-stranded DNA binding;5.59625500433266e-10!GO:0008026;ATP-dependent helicase activity;6.81602302062796e-10!GO:0006164;purine nucleotide biosynthetic process;6.8864938583686e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.03789738943127e-10!GO:0016607;nuclear speck;7.04082358961684e-10!GO:0008639;small protein conjugating enzyme activity;7.87549010198114e-10!GO:0005794;Golgi apparatus;1.35909758187524e-09!GO:0009260;ribonucleotide biosynthetic process;1.36917653028576e-09!GO:0009150;purine ribonucleotide metabolic process;1.55401902775809e-09!GO:0016787;hydrolase activity;1.60419763998943e-09!GO:0004842;ubiquitin-protein ligase activity;1.65007604679568e-09!GO:0046930;pore complex;1.67723341157836e-09!GO:0016740;transferase activity;1.69603380453693e-09!GO:0048519;negative regulation of biological process;2.82806342578556e-09!GO:0015078;hydrogen ion transmembrane transporter activity;3.17229969922203e-09!GO:0017038;protein import;3.17229969922203e-09!GO:0016568;chromatin modification;3.28103906011349e-09!GO:0019787;small conjugating protein ligase activity;3.28787076155452e-09!GO:0006461;protein complex assembly;3.86944757290716e-09!GO:0030532;small nuclear ribonucleoprotein complex;4.20847249648468e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.48494324572561e-09!GO:0006261;DNA-dependent DNA replication;4.73254816042417e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.3730753435372e-09!GO:0009056;catabolic process;5.50102026133257e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.1446571723178e-09!GO:0004812;aminoacyl-tRNA ligase activity;7.1446571723178e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.1446571723178e-09!GO:0019829;cation-transporting ATPase activity;7.20087153848863e-09!GO:0008565;protein transporter activity;7.51130811727504e-09!GO:0051028;mRNA transport;8.35967567727245e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.68561883930495e-09!GO:0009060;aerobic respiration;1.01091272351794e-08!GO:0051246;regulation of protein metabolic process;1.11104795433382e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.39739465520265e-08!GO:0043038;amino acid activation;1.62799780096859e-08!GO:0006418;tRNA aminoacylation for protein translation;1.62799780096859e-08!GO:0043039;tRNA aminoacylation;1.62799780096859e-08!GO:0051188;cofactor biosynthetic process;1.80479936103976e-08!GO:0003713;transcription coactivator activity;1.80913324992253e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.89414608135176e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.04379166885745e-08!GO:0016563;transcription activator activity;2.15648074141434e-08!GO:0015630;microtubule cytoskeleton;3.14825220091278e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.91715721908731e-08!GO:0015986;ATP synthesis coupled proton transport;5.26077373048443e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.26077373048443e-08!GO:0051325;interphase;6.72897736135552e-08!GO:0016779;nucleotidyltransferase activity;7.15109108719465e-08!GO:0043065;positive regulation of apoptosis;7.66950076462722e-08!GO:0048522;positive regulation of cellular process;8.16445578116628e-08!GO:0009199;ribonucleoside triphosphate metabolic process;8.50747790023582e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.02572273647871e-08!GO:0009141;nucleoside triphosphate metabolic process;9.35473589585691e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.83185375070128e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.83185375070128e-08!GO:0004298;threonine endopeptidase activity;1.06716962644371e-07!GO:0045333;cellular respiration;1.08720522377303e-07!GO:0043068;positive regulation of programmed cell death;1.17600595170817e-07!GO:0045786;negative regulation of progression through cell cycle;1.50361214234276e-07!GO:0016881;acid-amino acid ligase activity;1.51161243858676e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.58215967338112e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.58215967338112e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.88789700033938e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.88789700033938e-07!GO:0007243;protein kinase cascade;1.95609509734071e-07!GO:0051329;interphase of mitotic cell cycle;2.15989305375969e-07!GO:0048468;cell development;2.16629035580088e-07!GO:0005525;GTP binding;2.43063135139802e-07!GO:0016192;vesicle-mediated transport;3.23055119421246e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.69828483236353e-07!GO:0003924;GTPase activity;4.24425071237072e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.28202894568853e-07!GO:0032446;protein modification by small protein conjugation;4.50428627336096e-07!GO:0006099;tricarboxylic acid cycle;4.95982139349758e-07!GO:0046356;acetyl-CoA catabolic process;4.95982139349758e-07!GO:0006754;ATP biosynthetic process;5.21404660989765e-07!GO:0006753;nucleoside phosphate metabolic process;5.21404660989765e-07!GO:0000775;chromosome, pericentric region;5.36961839459722e-07!GO:0045259;proton-transporting ATP synthase complex;5.64662348373991e-07!GO:0046034;ATP metabolic process;5.84960454381778e-07!GO:0006917;induction of apoptosis;7.3012841945246e-07!GO:0005657;replication fork;8.04616420271034e-07!GO:0016567;protein ubiquitination;8.30906341926084e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.65018069489913e-07!GO:0006084;acetyl-CoA metabolic process;1.12707163827086e-06!GO:0012502;induction of programmed cell death;1.20241631939353e-06!GO:0019899;enzyme binding;1.23760803852039e-06!GO:0009117;nucleotide metabolic process;1.23760803852039e-06!GO:0005793;ER-Golgi intermediate compartment;1.28655849242453e-06!GO:0005768;endosome;1.32287287686562e-06!GO:0051170;nuclear import;1.44722739481107e-06!GO:0048475;coated membrane;1.45582896278834e-06!GO:0030117;membrane coat;1.45582896278834e-06!GO:0016564;transcription repressor activity;1.64884728769035e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.88421109472101e-06!GO:0005762;mitochondrial large ribosomal subunit;1.96014659194056e-06!GO:0000315;organellar large ribosomal subunit;1.96014659194056e-06!GO:0009108;coenzyme biosynthetic process;2.05612450255582e-06!GO:0006752;group transfer coenzyme metabolic process;2.33493130417403e-06!GO:0006310;DNA recombination;2.5136055872526e-06!GO:0008632;apoptotic program;3.23675858411098e-06!GO:0000245;spliceosome assembly;3.33294876373851e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.43035396247757e-06!GO:0015399;primary active transmembrane transporter activity;3.43035396247757e-06!GO:0006606;protein import into nucleus;3.92892097886447e-06!GO:0030120;vesicle coat;4.26064940435744e-06!GO:0030662;coated vesicle membrane;4.26064940435744e-06!GO:0000075;cell cycle checkpoint;4.44140434543981e-06!GO:0032561;guanyl ribonucleotide binding;4.494904043119e-06!GO:0019001;guanyl nucleotide binding;4.494904043119e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.63089880121385e-06!GO:0005667;transcription factor complex;5.32176530253871e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.34061126025433e-06!GO:0003714;transcription corepressor activity;5.94419775037198e-06!GO:0005813;centrosome;6.18141751579283e-06!GO:0009109;coenzyme catabolic process;6.39239958574232e-06!GO:0050794;regulation of cellular process;6.67982797890815e-06!GO:0008094;DNA-dependent ATPase activity;7.87556561025e-06!GO:0005819;spindle;7.90597983968587e-06!GO:0051187;cofactor catabolic process;8.1279669969193e-06!GO:0042802;identical protein binding;8.20113345849121e-06!GO:0006401;RNA catabolic process;8.85205830192535e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.76659940876965e-06!GO:0005770;late endosome;1.02365421607014e-05!GO:0031324;negative regulation of cellular metabolic process;1.03993485646073e-05!GO:0000786;nucleosome;1.0912081590734e-05!GO:0006950;response to stress;1.13914513158487e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.16406129586201e-05!GO:0005815;microtubule organizing center;1.17569491679098e-05!GO:0006613;cotranslational protein targeting to membrane;1.4611534956639e-05!GO:0003690;double-stranded DNA binding;1.50799083183006e-05!GO:0048518;positive regulation of biological process;1.63012299733632e-05!GO:0006091;generation of precursor metabolites and energy;1.64067735428802e-05!GO:0006839;mitochondrial transport;1.72815729350258e-05!GO:0003899;DNA-directed RNA polymerase activity;1.91131825114672e-05!GO:0000314;organellar small ribosomal subunit;1.9969847829798e-05!GO:0005763;mitochondrial small ribosomal subunit;1.9969847829798e-05!GO:0009615;response to virus;2.01955423559218e-05!GO:0005773;vacuole;2.3040122284368e-05!GO:0007051;spindle organization and biogenesis;2.39826321648391e-05!GO:0006417;regulation of translation;2.61897911608065e-05!GO:0003724;RNA helicase activity;2.97495306281494e-05!GO:0004674;protein serine/threonine kinase activity;3.32243234127318e-05!GO:0051168;nuclear export;3.7069698235641e-05!GO:0065009;regulation of a molecular function;3.90473573230273e-05!GO:0000323;lytic vacuole;4.02120151410053e-05!GO:0005764;lysosome;4.02120151410053e-05!GO:0043623;cellular protein complex assembly;4.14453599007928e-05!GO:0000151;ubiquitin ligase complex;4.1922053697563e-05!GO:0006402;mRNA catabolic process;4.19461199958715e-05!GO:0006302;double-strand break repair;4.39399778801018e-05!GO:0051427;hormone receptor binding;5.36023097105239e-05!GO:0005741;mitochondrial outer membrane;6.25312686489879e-05!GO:0007088;regulation of mitosis;6.32340131098466e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.44463126627967e-05!GO:0031968;organelle outer membrane;6.52355750168229e-05!GO:0016491;oxidoreductase activity;6.53954275614955e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;6.58143175570978e-05!GO:0043021;ribonucleoprotein binding;7.33880064055091e-05!GO:0043492;ATPase activity, coupled to movement of substances;7.64831462237011e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;8.43084795341281e-05!GO:0003729;mRNA binding;8.59221727980534e-05!GO:0019867;outer membrane;8.6380000451433e-05!GO:0003684;damaged DNA binding;8.66382831195147e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.14889791646364e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000105967986258214!GO:0035257;nuclear hormone receptor binding;0.000109529808471972!GO:0006626;protein targeting to mitochondrion;0.000115152510433421!GO:0007242;intracellular signaling cascade;0.000118316592792741!GO:0045941;positive regulation of transcription;0.000122727587032787!GO:0007006;mitochondrial membrane organization and biogenesis;0.000126449668720423!GO:0004527;exonuclease activity;0.000136751791341977!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000143756496655472!GO:0008654;phospholipid biosynthetic process;0.000160420119001715!GO:0009892;negative regulation of metabolic process;0.000171895175408986!GO:0000082;G1/S transition of mitotic cell cycle;0.000173290896343022!GO:0044431;Golgi apparatus part;0.00018648391579865!GO:0006082;organic acid metabolic process;0.000191289151516249!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000191523422594937!GO:0005885;Arp2/3 protein complex;0.000193540606422951!GO:0031326;regulation of cellular biosynthetic process;0.000199779223408467!GO:0019752;carboxylic acid metabolic process;0.000216537500524912!GO:0043681;protein import into mitochondrion;0.000219818861228387!GO:0016363;nuclear matrix;0.000252379641788211!GO:0015992;proton transport;0.000258295820668719!GO:0006818;hydrogen transport;0.000270069367391279!GO:0030384;phosphoinositide metabolic process;0.00031307621419648!GO:0005798;Golgi-associated vesicle;0.000326785069632495!GO:0009165;nucleotide biosynthetic process;0.000334449497156017!GO:0006612;protein targeting to membrane;0.000390297835238225!GO:0004518;nuclease activity;0.000407938876511928!GO:0003678;DNA helicase activity;0.00042964366065928!GO:0000776;kinetochore;0.00042964366065928!GO:0006414;translational elongation;0.000442049642378758!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000456583642083992!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000461384378302501!GO:0051789;response to protein stimulus;0.00048415255381242!GO:0006986;response to unfolded protein;0.00048415255381242!GO:0045893;positive regulation of transcription, DNA-dependent;0.000488571204226496!GO:0051052;regulation of DNA metabolic process;0.000496165823452757!GO:0006650;glycerophospholipid metabolic process;0.000505203728596104!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000505509837099613!GO:0008186;RNA-dependent ATPase activity;0.000549468062406!GO:0031072;heat shock protein binding;0.000559832868247337!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000564244450639233!GO:0016741;transferase activity, transferring one-carbon groups;0.000573645959562968!GO:0016481;negative regulation of transcription;0.000615868044064485!GO:0005048;signal sequence binding;0.000682951843440202!GO:0003682;chromatin binding;0.000703327329551208!GO:0007017;microtubule-based process;0.00075250023792635!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000786110131205995!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000786110131205995!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000786110131205995!GO:0008168;methyltransferase activity;0.000816652913212873!GO:0016301;kinase activity;0.00085263335817626!GO:0019843;rRNA binding;0.000852848273223027!GO:0051252;regulation of RNA metabolic process;0.000886054372026774!GO:0007059;chromosome segregation;0.000907924402741081!GO:0032508;DNA duplex unwinding;0.000911801817952453!GO:0032392;DNA geometric change;0.000911801817952453!GO:0045454;cell redox homeostasis;0.000951646226504182!GO:0008637;apoptotic mitochondrial changes;0.000954700414973128!GO:0005637;nuclear inner membrane;0.000955480271905438!GO:0048471;perinuclear region of cytoplasm;0.000965090734098174!GO:0032259;methylation;0.000974620617369593!GO:0022890;inorganic cation transmembrane transporter activity;0.0010234642851136!GO:0044440;endosomal part;0.00108710061612859!GO:0010008;endosome membrane;0.00108710061612859!GO:0007010;cytoskeleton organization and biogenesis;0.00110336435643574!GO:0007093;mitotic cell cycle checkpoint;0.00110336435643574!GO:0051920;peroxiredoxin activity;0.00115902159827374!GO:0015980;energy derivation by oxidation of organic compounds;0.00122075112098616!GO:0005684;U2-dependent spliceosome;0.00126676419046461!GO:0008033;tRNA processing;0.00128272174021925!GO:0046489;phosphoinositide biosynthetic process;0.00136890394034259!GO:0050789;regulation of biological process;0.00137233810595728!GO:0000228;nuclear chromosome;0.0014525730164852!GO:0044452;nucleolar part;0.00147549051053542!GO:0048500;signal recognition particle;0.00148848745146059!GO:0004004;ATP-dependent RNA helicase activity;0.00153988395001954!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00155978186829667!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00155978186829667!GO:0006383;transcription from RNA polymerase III promoter;0.00157878320558023!GO:0016251;general RNA polymerase II transcription factor activity;0.00157954738010616!GO:0006520;amino acid metabolic process;0.00168208109125018!GO:0005758;mitochondrial intermembrane space;0.00168895904579586!GO:0043488;regulation of mRNA stability;0.00173072695362861!GO:0043487;regulation of RNA stability;0.00173072695362861!GO:0043414;biopolymer methylation;0.00175024103542215!GO:0043596;nuclear replication fork;0.00176511706174947!GO:0042770;DNA damage response, signal transduction;0.00200248766890752!GO:0030880;RNA polymerase complex;0.0020702172119466!GO:0006268;DNA unwinding during replication;0.00207380460427019!GO:0009889;regulation of biosynthetic process;0.00214162332359722!GO:0031902;late endosome membrane;0.0022371649357075!GO:0005874;microtubule;0.00228414195824902!GO:0046983;protein dimerization activity;0.00234486979666473!GO:0022415;viral reproductive process;0.00237652094458405!GO:0009967;positive regulation of signal transduction;0.00248728816607822!GO:0009893;positive regulation of metabolic process;0.00248728816607822!GO:0031252;leading edge;0.00256634412902208!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.00273140171733862!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00280018981547064!GO:0046474;glycerophospholipid biosynthetic process;0.00280713382829215!GO:0044438;microbody part;0.00292833499248881!GO:0044439;peroxisomal part;0.00292833499248881!GO:0000139;Golgi membrane;0.00297947410507233!GO:0006595;polyamine metabolic process;0.00297947410507233!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00307790921304047!GO:0000287;magnesium ion binding;0.00310131050701366!GO:0006352;transcription initiation;0.00310715172275213!GO:0030658;transport vesicle membrane;0.00322561658871709!GO:0016853;isomerase activity;0.00323074745893099!GO:0046483;heterocycle metabolic process;0.00330438437901855!GO:0006289;nucleotide-excision repair;0.0033465295306013!GO:0000049;tRNA binding;0.00335282416697829!GO:0031988;membrane-bound vesicle;0.00335364660616255!GO:0006730;one-carbon compound metabolic process;0.00335431436164298!GO:0018193;peptidyl-amino acid modification;0.00335431436164298!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0035437195348464!GO:0016126;sterol biosynthetic process;0.00368585706276656!GO:0030118;clathrin coat;0.00370521278216183!GO:0031982;vesicle;0.00371343183567584!GO:0030867;rough endoplasmic reticulum membrane;0.00371343183567584!GO:0006695;cholesterol biosynthetic process;0.0039390397409387!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0039410746050537!GO:0015002;heme-copper terminal oxidase activity;0.0039410746050537!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0039410746050537!GO:0004129;cytochrome-c oxidase activity;0.0039410746050537!GO:0046966;thyroid hormone receptor binding;0.00394160205868621!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0039775515519792!GO:0000428;DNA-directed RNA polymerase complex;0.0039775515519792!GO:0006405;RNA export from nucleus;0.00404295088612396!GO:0050790;regulation of catalytic activity;0.00404295088612396!GO:0006611;protein export from nucleus;0.00404295088612396!GO:0009081;branched chain family amino acid metabolic process;0.00404323981365026!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00405427836903062!GO:0045047;protein targeting to ER;0.00405427836903062!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00412891480920714!GO:0000059;protein import into nucleus, docking;0.00415200559181887!GO:0008312;7S RNA binding;0.00418589480232324!GO:0008139;nuclear localization sequence binding;0.00420534287713059!GO:0016272;prefoldin complex;0.00444281305791184!GO:0004722;protein serine/threonine phosphatase activity;0.00451647608252913!GO:0031970;organelle envelope lumen;0.00453024801682752!GO:0000209;protein polyubiquitination;0.00453911853060865!GO:0031903;microbody membrane;0.00453911853060865!GO:0005778;peroxisomal membrane;0.00453911853060865!GO:0031124;mRNA 3'-end processing;0.00453911853060865!GO:0006284;base-excision repair;0.00453911853060865!GO:0008610;lipid biosynthetic process;0.00464345005069782!GO:0006891;intra-Golgi vesicle-mediated transport;0.00464345005069782!GO:0008408;3'-5' exonuclease activity;0.00480283584274541!GO:0016197;endosome transport;0.00483997012736388!GO:0030217;T cell differentiation;0.00504554779464769!GO:0030137;COPI-coated vesicle;0.00525927681817139!GO:0030176;integral to endoplasmic reticulum membrane;0.00525927681817139!GO:0031325;positive regulation of cellular metabolic process;0.00536846477366402!GO:0030663;COPI coated vesicle membrane;0.00547817224605054!GO:0030126;COPI vesicle coat;0.00547817224605054!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00565978689786402!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00568805546564678!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0058272721998066!GO:0001772;immunological synapse;0.00586731568632097!GO:0016023;cytoplasmic membrane-bound vesicle;0.00607850392927961!GO:0015631;tubulin binding;0.00610611127806433!GO:0006275;regulation of DNA replication;0.00615326472883778!GO:0007259;JAK-STAT cascade;0.00627596539033631!GO:0004532;exoribonuclease activity;0.00633781933362638!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00633781933362638!GO:0007052;mitotic spindle organization and biogenesis;0.00638278480803438!GO:0000792;heterochromatin;0.00640194716161334!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00672855194327033!GO:0016859;cis-trans isomerase activity;0.00676381771294627!GO:0048487;beta-tubulin binding;0.00706755074849!GO:0006007;glucose catabolic process;0.00710778261770004!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00727352628697242!GO:0008287;protein serine/threonine phosphatase complex;0.00727523457365152!GO:0007050;cell cycle arrest;0.00733736427833551!GO:0031410;cytoplasmic vesicle;0.00733736427833551!GO:0008629;induction of apoptosis by intracellular signals;0.00733736427833551!GO:0042393;histone binding;0.00749784735495352!GO:0004576;oligosaccharyl transferase activity;0.00760891755194602!GO:0008250;oligosaccharyl transferase complex;0.00760891755194602!GO:0003711;transcription elongation regulator activity;0.00764237228278937!GO:0006270;DNA replication initiation;0.00778002367977066!GO:0009112;nucleobase metabolic process;0.00789255514963779!GO:0030660;Golgi-associated vesicle membrane;0.0080025580925642!GO:0008213;protein amino acid alkylation;0.0080025580925642!GO:0006479;protein amino acid methylation;0.0080025580925642!GO:0003702;RNA polymerase II transcription factor activity;0.00828022470400815!GO:0016584;nucleosome positioning;0.00828022470400815!GO:0022411;cellular component disassembly;0.0082838656394283!GO:0005788;endoplasmic reticulum lumen;0.00847038998964548!GO:0043284;biopolymer biosynthetic process;0.00849370091568154!GO:0005869;dynactin complex;0.00858721348440887!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00866428936993821!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00866428936993821!GO:0001836;release of cytochrome c from mitochondria;0.00866447730762957!GO:0019079;viral genome replication;0.00898541199013003!GO:0043022;ribosome binding;0.00911355697523681!GO:0046982;protein heterodimerization activity;0.00921642075122195!GO:0043601;nuclear replisome;0.00921642075122195!GO:0030894;replisome;0.00921642075122195!GO:0006497;protein amino acid lipidation;0.00933041407186355!GO:0007264;small GTPase mediated signal transduction;0.00935090036984586!GO:0000339;RNA cap binding;0.00959686779271875!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0102694913574788!GO:0033673;negative regulation of kinase activity;0.0104630041915887!GO:0006469;negative regulation of protein kinase activity;0.0104630041915887!GO:0030433;ER-associated protein catabolic process;0.0104665929126101!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0104665929126101!GO:0032200;telomere organization and biogenesis;0.0106475667417655!GO:0000723;telomere maintenance;0.0106475667417655!GO:0005774;vacuolar membrane;0.0110395482284155!GO:0006740;NADPH regeneration;0.0111608042669681!GO:0006098;pentose-phosphate shunt;0.0111608042669681!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0111608042669681!GO:0006518;peptide metabolic process;0.0111857531079184!GO:0051235;maintenance of localization;0.0115089721592966!GO:0002521;leukocyte differentiation;0.0115223070075599!GO:0008022;protein C-terminus binding;0.011778894170463!GO:0006468;protein amino acid phosphorylation;0.0118312489476765!GO:0045045;secretory pathway;0.0118411334774025!GO:0051540;metal cluster binding;0.0118773742669926!GO:0051536;iron-sulfur cluster binding;0.0118773742669926!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0119834728761867!GO:0030308;negative regulation of cell growth;0.0119853069474416!GO:0006778;porphyrin metabolic process;0.0120117264368835!GO:0033013;tetrapyrrole metabolic process;0.0120117264368835!GO:0051539;4 iron, 4 sulfur cluster binding;0.0120451388063062!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0121242292432135!GO:0016311;dephosphorylation;0.0121242292432135!GO:0009083;branched chain family amino acid catabolic process;0.0121288690514864!GO:0045792;negative regulation of cell size;0.0121667055194735!GO:0004003;ATP-dependent DNA helicase activity;0.0121853646822389!GO:0006506;GPI anchor biosynthetic process;0.012200546110361!GO:0030521;androgen receptor signaling pathway;0.012200546110361!GO:0005832;chaperonin-containing T-complex;0.0122029044877831!GO:0006144;purine base metabolic process;0.0122734156444293!GO:0016788;hydrolase activity, acting on ester bonds;0.0129523974116499!GO:0004721;phosphoprotein phosphatase activity;0.013054063689775!GO:0000178;exosome (RNase complex);0.0134807429716734!GO:0006779;porphyrin biosynthetic process;0.0135154811695897!GO:0033014;tetrapyrrole biosynthetic process;0.0135154811695897!GO:0006505;GPI anchor metabolic process;0.0135229087300265!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0136233041660851!GO:0005876;spindle microtubule;0.0141094290242144!GO:0016569;covalent chromatin modification;0.0141411689171004!GO:0006338;chromatin remodeling;0.0142072469144931!GO:0046467;membrane lipid biosynthetic process;0.01424483460578!GO:0051348;negative regulation of transferase activity;0.01441916752937!GO:0051087;chaperone binding;0.0144285138682121!GO:0006519;amino acid and derivative metabolic process;0.0144294035965667!GO:0009124;nucleoside monophosphate biosynthetic process;0.0145873766684581!GO:0009123;nucleoside monophosphate metabolic process;0.0145873766684581!GO:0007034;vacuolar transport;0.014774637388829!GO:0031570;DNA integrity checkpoint;0.0148487610346402!GO:0005769;early endosome;0.0148487610346402!GO:0006378;mRNA polyadenylation;0.0151284330173616!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0153541294925515!GO:0016791;phosphoric monoester hydrolase activity;0.0154591925305748!GO:0051098;regulation of binding;0.0158371053597308!GO:0035258;steroid hormone receptor binding;0.0158467488795611!GO:0031123;RNA 3'-end processing;0.0159845135439408!GO:0047485;protein N-terminus binding;0.0162641426629712!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0164443719174989!GO:0010257;NADH dehydrogenase complex assembly;0.0164443719174989!GO:0033108;mitochondrial respiratory chain complex assembly;0.0164443719174989!GO:0044454;nuclear chromosome part;0.0171446432027095!GO:0018196;peptidyl-asparagine modification;0.0171595517711998!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0171595517711998!GO:0005765;lysosomal membrane;0.0173107907052234!GO:0016408;C-acyltransferase activity;0.0176022685973741!GO:0040029;regulation of gene expression, epigenetic;0.0176378839835479!GO:0008276;protein methyltransferase activity;0.0176418578850799!GO:0008234;cysteine-type peptidase activity;0.0178760549398411!GO:0051251;positive regulation of lymphocyte activation;0.0178772601700656!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0186590703438107!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0186630440305273!GO:0000781;chromosome, telomeric region;0.0186630440305273!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0186630440305273!GO:0030496;midbody;0.0188083999752215!GO:0005669;transcription factor TFIID complex;0.0190311989661508!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0193793735834133!GO:0006118;electron transport;0.0193793735834133!GO:0000725;recombinational repair;0.019718783857328!GO:0000724;double-strand break repair via homologous recombination;0.019718783857328!GO:0000096;sulfur amino acid metabolic process;0.0198096002199526!GO:0006984;ER-nuclear signaling pathway;0.0198208393264601!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0200532297995181!GO:0003725;double-stranded RNA binding;0.0204245560499859!GO:0009451;RNA modification;0.0204245560499859!GO:0003746;translation elongation factor activity;0.0206981868701808!GO:0005777;peroxisome;0.0217689326075957!GO:0042579;microbody;0.0217689326075957!GO:0044437;vacuolar part;0.0217783371360441!GO:0009303;rRNA transcription;0.0217783371360441!GO:0000118;histone deacetylase complex;0.0219467104090512!GO:0046426;negative regulation of JAK-STAT cascade;0.0220949487022239!GO:0051881;regulation of mitochondrial membrane potential;0.0222174659449605!GO:0043130;ubiquitin binding;0.0222174659449605!GO:0032182;small conjugating protein binding;0.0222174659449605!GO:0030518;steroid hormone receptor signaling pathway;0.0222430103018064!GO:0030508;thiol-disulfide exchange intermediate activity;0.0224551959774572!GO:0006376;mRNA splice site selection;0.0227095943876175!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0227095943876175!GO:0043549;regulation of kinase activity;0.0229066663596361!GO:0032940;secretion by cell;0.0229066663596361!GO:0006220;pyrimidine nucleotide metabolic process;0.0230164405781961!GO:0033116;ER-Golgi intermediate compartment membrane;0.0237690704742392!GO:0050662;coenzyme binding;0.023827796828822!GO:0046365;monosaccharide catabolic process;0.0238662447075114!GO:0042158;lipoprotein biosynthetic process;0.0240296226137599!GO:0046979;TAP2 binding;0.0242659374129018!GO:0046977;TAP binding;0.0242659374129018!GO:0046978;TAP1 binding;0.0242659374129018!GO:0009116;nucleoside metabolic process;0.0246937313012573!GO:0019976;interleukin-2 binding;0.0250130214498395!GO:0004911;interleukin-2 receptor activity;0.0250130214498395!GO:0004177;aminopeptidase activity;0.0250647985500958!GO:0000726;non-recombinational repair;0.0250647985500958!GO:0000185;activation of MAPKKK activity;0.0250765955490561!GO:0007346;regulation of progression through mitotic cell cycle;0.0252700068845133!GO:0045892;negative regulation of transcription, DNA-dependent;0.0254327139900773!GO:0000175;3'-5'-exoribonuclease activity;0.0256382837203787!GO:0004860;protein kinase inhibitor activity;0.0256941500979133!GO:0016790;thiolester hydrolase activity;0.0258814458560305!GO:0030833;regulation of actin filament polymerization;0.0258814458560305!GO:0022406;membrane docking;0.0261709989425328!GO:0048278;vesicle docking;0.0261709989425328!GO:0008538;proteasome activator activity;0.0265688331111042!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0271531913508685!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0271531913508685!GO:0008180;signalosome;0.0272428590473393!GO:0008320;protein transmembrane transporter activity;0.0272428590473393!GO:0030133;transport vesicle;0.0274270247759947!GO:0051338;regulation of transferase activity;0.0274270247759947!GO:0000922;spindle pole;0.0274432259001601!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.0275671614473472!GO:0045926;negative regulation of growth;0.0277782791994077!GO:0004300;enoyl-CoA hydratase activity;0.0278111532449603!GO:0019222;regulation of metabolic process;0.0282079353151829!GO:0042168;heme metabolic process;0.0287819853074699!GO:0030119;AP-type membrane coat adaptor complex;0.0288437778479086!GO:0044262;cellular carbohydrate metabolic process;0.0289630293107321!GO:0005092;GDP-dissociation inhibitor activity;0.0294879647155167!GO:0009161;ribonucleoside monophosphate metabolic process;0.0294879647155167!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0294879647155167!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0297177888703502!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0297177888703502!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0297177888703502!GO:0043281;regulation of caspase activity;0.0297650597521102!GO:0030134;ER to Golgi transport vesicle;0.030066859857359!GO:0000070;mitotic sister chromatid segregation;0.0301334960241666!GO:0019210;kinase inhibitor activity;0.0301435136518101!GO:0006470;protein amino acid dephosphorylation;0.0301822047006294!GO:0000819;sister chromatid segregation;0.0307579738486716!GO:0019783;small conjugating protein-specific protease activity;0.0313966780569362!GO:0002520;immune system development;0.0314940783126902!GO:0031371;ubiquitin conjugating enzyme complex;0.0315391920547978!GO:0022884;macromolecule transmembrane transporter activity;0.031714247361202!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.031714247361202!GO:0000077;DNA damage checkpoint;0.03174732241446!GO:0016570;histone modification;0.0322789031252516!GO:0005652;nuclear lamina;0.0325593751408566!GO:0046164;alcohol catabolic process;0.0329568008398194!GO:0006783;heme biosynthetic process;0.0330429527210227!GO:0016407;acetyltransferase activity;0.0331939113358647!GO:0030125;clathrin vesicle coat;0.0333946318435833!GO:0030665;clathrin coated vesicle membrane;0.0333946318435833!GO:0035035;histone acetyltransferase binding;0.0334331647506986!GO:0006596;polyamine biosynthetic process;0.0339427163151582!GO:0030127;COPII vesicle coat;0.0340506515228404!GO:0012507;ER to Golgi transport vesicle membrane;0.0340506515228404!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0351720644244478!GO:0051287;NAD binding;0.0353389425151768!GO:0004843;ubiquitin-specific protease activity;0.0353884251301146!GO:0051053;negative regulation of DNA metabolic process;0.0355849693223314!GO:0003988;acetyl-CoA C-acyltransferase activity;0.035703301836077!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0359334968063399!GO:0042101;T cell receptor complex;0.0359607304558947!GO:0019238;cyclohydrolase activity;0.0359607304558947!GO:0031529;ruffle organization and biogenesis;0.0362139165499531!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0364431688140181!GO:0019320;hexose catabolic process;0.0365573088488703!GO:0006904;vesicle docking during exocytosis;0.0369995531992228!GO:0000152;nuclear ubiquitin ligase complex;0.0369995531992228!GO:0008283;cell proliferation;0.0374773464118932!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0374773464118932!GO:0000060;protein import into nucleus, translocation;0.037505987236133!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0375149536631301!GO:0004540;ribonuclease activity;0.0376548387444594!GO:0006607;NLS-bearing substrate import into nucleus;0.03805931588829!GO:0019900;kinase binding;0.0382019880547467!GO:0005784;translocon complex;0.0383256361024163!GO:0030332;cyclin binding;0.0387573956916305!GO:0060090;molecular adaptor activity;0.0392121451012892!GO:0031625;ubiquitin protein ligase binding;0.0393050697541574!GO:0006643;membrane lipid metabolic process;0.0396168925815585!GO:0033239;negative regulation of amine metabolic process;0.0396168925815585!GO:0045763;negative regulation of amino acid metabolic process;0.0396168925815585!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0396168925815585!GO:0042613;MHC class II protein complex;0.0397523487368263!GO:0008624;induction of apoptosis by extracellular signals;0.0398201989091801!GO:0019901;protein kinase binding;0.0400194817610157!GO:0001558;regulation of cell growth;0.0405559409307327!GO:0007041;lysosomal transport;0.0405559409307327!GO:0005663;DNA replication factor C complex;0.0405559409307327!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0405858736627804!GO:0042110;T cell activation;0.041353199204408!GO:0045859;regulation of protein kinase activity;0.0415153717520504!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0422887074515666!GO:0046519;sphingoid metabolic process;0.0424799286473493!GO:0045936;negative regulation of phosphate metabolic process;0.043443468372276!GO:0030041;actin filament polymerization;0.0438017253208222!GO:0000738;DNA catabolic process, exonucleolytic;0.0439676844634695!GO:0006096;glycolysis;0.0448651603276977!GO:0019058;viral infectious cycle;0.0453225589497461!GO:0030131;clathrin adaptor complex;0.0453225589497461!GO:0030098;lymphocyte differentiation;0.0457309780901356!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0457931037901081!GO:0046649;lymphocyte activation;0.0461295385710108!GO:0008017;microtubule binding;0.0462971179030524!GO:0017134;fibroblast growth factor binding;0.0463765844705783!GO:0044450;microtubule organizing center part;0.0466395928938835!GO:0006919;caspase activation;0.0467220595668142!GO:0051320;S phase;0.0472640038297731!GO:0030911;TPR domain binding;0.0472640038297731!GO:0008097;5S rRNA binding;0.0477189512053109!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0482808728172166!GO:0006672;ceramide metabolic process;0.0486609830972229!GO:0046325;negative regulation of glucose import;0.0487733742730779!GO:0006644;phospholipid metabolic process;0.049077214124908 | |||
|sample_id=10744 | |sample_id=10744 | ||
|sample_note= | |sample_note= | ||
Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=TLX2:2.24650583987;RORA:1.85016307054;ELF1,2,4:1.35475968022;FOXP3:1.354727675;NFKB1_REL_RELA:1.34707016116;RUNX1..3:1.28805021909;IRF1,2:1.18276450663;CDX1,2,4:1.16840912832;ESR1:1.13263047672;POU2F1..3:1.12273400339;NFY{A,B,C}:1.05759367862;CREB1:1.05403389354;E2F1..5:1.03912705491;YY1:1.03701193254;MYOD1:1.02510442988;MYB:1.01039912525;STAT2,4,6:1.00114270047;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.96645498956;CRX:0.914551644104;TGIF1:0.912765095398;NKX6-1,2:0.857120075392;ZBTB16:0.830626184155;IKZF2:0.82000201941;PAX4:0.735744322409;PBX1:0.706370195076;AIRE:0.695339399886;DMAP1_NCOR{1,2}_SMARC:0.687722402792;HES1:0.678586427373;SPI1:0.658835488949;FOXP1:0.625885187375;TP53:0.594314096124;POU3F1..4:0.588907686543;GATA6:0.565421227689;TFDP1:0.558674533462;NKX2-1,4:0.553036197367;ATF4:0.53019881658;HOXA9_MEIS1:0.510143731867;PAX6:0.480881825772;RFX2..5_RFXANK_RFXAP:0.475318159557;ZNF148:0.469279438412;POU1F1:0.458397042506;HSF1,2:0.447625450738;NR1H4:0.412289316171;ATF5_CREB3:0.407677887561;ELK1,4_GABP{A,B1}:0.402223501715;NR5A1,2:0.39335219161;ETS1,2:0.364979769761;HNF4A_NR2F1,2:0.349556525571;BREu{core}:0.303235929428;GFI1:0.283055627488;PAX3,7:0.269636968872;FOXM1:0.257358116767;PAX8:0.250713817633;GCM1,2:0.242962592781;PDX1:0.214190530925;SRF:0.195590723838;CUX2:0.191533125756;NKX3-2:0.185915781899;STAT5{A,B}:0.181273040153;PRRX1,2:0.170940733308;SPIB:0.15316417028;NRF1:0.145038597654;SOX17:0.143735932982;T:0.100894406693;SOX{8,9,10}:0.0995769438756;FOXN1:0.0828358030259;MYFfamily:0.0820831816852;HOX{A6,A7,B6,B7}:0.0791688280108;FOXA2:0.0732680694112;VSX1,2:0.072178618511;IRF7:0.0467189271519;BPTF:0.0373577778522;STAT1,3:0.0206644613237;PAX1,9:-0.00536125601394;ATF2:-0.0112491782739;ZNF143:-0.0193496913032;LEF1_TCF7_TCF7L1,2:-0.0208048916754;HOX{A4,D4}:-0.0216479789941;NANOG:-0.030331481488;NKX3-1:-0.043848862428;ONECUT1,2:-0.0463061789073;EVI1:-0.0472228888592;TEF:-0.0509267652328;LMO2:-0.0537765484741;JUN:-0.0582968385323;ZNF423:-0.0868352805203;MAFB:-0.0955623362508;GLI1..3:-0.113426728453;GZF1:-0.122512707504;FOSL2:-0.125432528729;NANOG{mouse}:-0.150562138432;HMX1:-0.154266430893;PAX2:-0.15605823152;FOS_FOS{B,L1}_JUN{B,D}:-0.164049455743;HNF1A:-0.170622864022;SNAI1..3:-0.196934596561;HAND1,2:-0.20055174298;ZEB1:-0.208210224041;POU5F1:-0.230503886963;ALX1:-0.232109736292;ESRRA:-0.233620433082;BACH2:-0.244960519764;FOX{F1,F2,J1}:-0.265341525741;NFE2:-0.269279243355;NFIX:-0.280642633438;NFE2L1:-0.285784412789;MTF1:-0.306373314087;GFI1B:-0.316720941493;ZFP161:-0.321961986506;PRDM1:-0.323406918701;AR:-0.328237871376;EGR1..3:-0.354659983514;TOPORS:-0.358544920826;MEF2{A,B,C,D}:-0.369011150155;NFE2L2:-0.374573836178;UFEwm:-0.393443845048;NKX2-3_NKX2-5:-0.400660764189;FOX{I1,J2}:-0.409477542457;AHR_ARNT_ARNT2:-0.416875839692;RXRA_VDR{dimer}:-0.42184822237;TBP:-0.423349075998;MTE{core}:-0.442812331736;ATF6:-0.452336732917;REST:-0.460467970516;ZIC1..3:-0.463411169389;PITX1..3:-0.469372916679;TFAP2B:-0.473252266927;EN1,2:-0.479375109368;ARID5B:-0.492975073381;CEBPA,B_DDIT3:-0.508838803278;SOX5:-0.510101208041;NR3C1:-0.511469657449;EP300:-0.516709718922;ZNF384:-0.545457422657;FOXQ1:-0.559604658566;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.563523631062;NFATC1..3:-0.574007380164;DBP:-0.581346922619;ZBTB6:-0.592525456448;RREB1:-0.599756724405;OCT4_SOX2{dimer}:-0.601192655906;TFCP2:-0.619657437824;SOX2:-0.642781938325;HIC1:-0.645908369228;SMAD1..7,9:-0.669281825517;GATA4:-0.6914163598;FOXO1,3,4:-0.6937350069;TFAP4:-0.69560105214;RFX1:-0.706210807622;KLF4:-0.729958603036;FOX{D1,D2}:-0.748457012946;EBF1:-0.749595167463;bHLH_family:-0.762538328543;TAL1_TCF{3,4,12}:-0.782952741799;NHLH1,2:-0.788021020015;CDC5L:-0.791482657146;ZNF238:-0.798571543;HLF:-0.798947569275;SREBF1,2:-0.80738962191;POU6F1:-0.814070913487;NFIL3:-0.814954200516;FOXD3:-0.816798487182;NR6A1:-0.835513850297;TBX4,5:-0.846302711853;RBPJ:-0.849648918368;MED-1{core}:-0.871144033859;IKZF1:-0.891211731682;NKX2-2,8:-0.893984962353;PPARG:-0.907102117805;SPZ1:-0.936053948517;PAX5:-1.00451699457;GTF2A1,2:-1.00900009128;HMGA1,2:-1.02388115215;MZF1:-1.03777150451;ALX4:-1.04845606851;TFAP2{A,C}:-1.06031102072;XBP1:-1.07361244618;MYBL2:-1.07571852689;HIF1A:-1.08852099177;LHX3,4:-1.0964389247;PATZ1:-1.12975306663;MAZ:-1.1528436423;XCPE1{core}:-1.1794992463;RXR{A,B,G}:-1.17978868443;GTF2I:-1.24457671838;SP1:-1.26080904581;HOX{A5,B5}:-1.28470610641;TLX1..3_NFIC{dimer}:-1.36832028467;HBP1_HMGB_SSRP1_UBTF:-1.3718083974;FOXL1:-1.50623407951;TEAD1:-1.58546837461;ADNP_IRX_SIX_ZHX:-1.61922131385 | |top_motifs=TLX2:2.24650583987;RORA:1.85016307054;ELF1,2,4:1.35475968022;FOXP3:1.354727675;NFKB1_REL_RELA:1.34707016116;RUNX1..3:1.28805021909;IRF1,2:1.18276450663;CDX1,2,4:1.16840912832;ESR1:1.13263047672;POU2F1..3:1.12273400339;NFY{A,B,C}:1.05759367862;CREB1:1.05403389354;E2F1..5:1.03912705491;YY1:1.03701193254;MYOD1:1.02510442988;MYB:1.01039912525;STAT2,4,6:1.00114270047;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.96645498956;CRX:0.914551644104;TGIF1:0.912765095398;NKX6-1,2:0.857120075392;ZBTB16:0.830626184155;IKZF2:0.82000201941;PAX4:0.735744322409;PBX1:0.706370195076;AIRE:0.695339399886;DMAP1_NCOR{1,2}_SMARC:0.687722402792;HES1:0.678586427373;SPI1:0.658835488949;FOXP1:0.625885187375;TP53:0.594314096124;POU3F1..4:0.588907686543;GATA6:0.565421227689;TFDP1:0.558674533462;NKX2-1,4:0.553036197367;ATF4:0.53019881658;HOXA9_MEIS1:0.510143731867;PAX6:0.480881825772;RFX2..5_RFXANK_RFXAP:0.475318159557;ZNF148:0.469279438412;POU1F1:0.458397042506;HSF1,2:0.447625450738;NR1H4:0.412289316171;ATF5_CREB3:0.407677887561;ELK1,4_GABP{A,B1}:0.402223501715;NR5A1,2:0.39335219161;ETS1,2:0.364979769761;HNF4A_NR2F1,2:0.349556525571;BREu{core}:0.303235929428;GFI1:0.283055627488;PAX3,7:0.269636968872;FOXM1:0.257358116767;PAX8:0.250713817633;GCM1,2:0.242962592781;PDX1:0.214190530925;SRF:0.195590723838;CUX2:0.191533125756;NKX3-2:0.185915781899;STAT5{A,B}:0.181273040153;PRRX1,2:0.170940733308;SPIB:0.15316417028;NRF1:0.145038597654;SOX17:0.143735932982;T:0.100894406693;SOX{8,9,10}:0.0995769438756;FOXN1:0.0828358030259;MYFfamily:0.0820831816852;HOX{A6,A7,B6,B7}:0.0791688280108;FOXA2:0.0732680694112;VSX1,2:0.072178618511;IRF7:0.0467189271519;BPTF:0.0373577778522;STAT1,3:0.0206644613237;PAX1,9:-0.00536125601394;ATF2:-0.0112491782739;ZNF143:-0.0193496913032;LEF1_TCF7_TCF7L1,2:-0.0208048916754;HOX{A4,D4}:-0.0216479789941;NANOG:-0.030331481488;NKX3-1:-0.043848862428;ONECUT1,2:-0.0463061789073;EVI1:-0.0472228888592;TEF:-0.0509267652328;LMO2:-0.0537765484741;JUN:-0.0582968385323;ZNF423:-0.0868352805203;MAFB:-0.0955623362508;GLI1..3:-0.113426728453;GZF1:-0.122512707504;FOSL2:-0.125432528729;NANOG{mouse}:-0.150562138432;HMX1:-0.154266430893;PAX2:-0.15605823152;FOS_FOS{B,L1}_JUN{B,D}:-0.164049455743;HNF1A:-0.170622864022;SNAI1..3:-0.196934596561;HAND1,2:-0.20055174298;ZEB1:-0.208210224041;POU5F1:-0.230503886963;ALX1:-0.232109736292;ESRRA:-0.233620433082;BACH2:-0.244960519764;FOX{F1,F2,J1}:-0.265341525741;NFE2:-0.269279243355;NFIX:-0.280642633438;NFE2L1:-0.285784412789;MTF1:-0.306373314087;GFI1B:-0.316720941493;ZFP161:-0.321961986506;PRDM1:-0.323406918701;AR:-0.328237871376;EGR1..3:-0.354659983514;TOPORS:-0.358544920826;MEF2{A,B,C,D}:-0.369011150155;NFE2L2:-0.374573836178;UFEwm:-0.393443845048;NKX2-3_NKX2-5:-0.400660764189;FOX{I1,J2}:-0.409477542457;AHR_ARNT_ARNT2:-0.416875839692;RXRA_VDR{dimer}:-0.42184822237;TBP:-0.423349075998;MTE{core}:-0.442812331736;ATF6:-0.452336732917;REST:-0.460467970516;ZIC1..3:-0.463411169389;PITX1..3:-0.469372916679;TFAP2B:-0.473252266927;EN1,2:-0.479375109368;ARID5B:-0.492975073381;CEBPA,B_DDIT3:-0.508838803278;SOX5:-0.510101208041;NR3C1:-0.511469657449;EP300:-0.516709718922;ZNF384:-0.545457422657;FOXQ1:-0.559604658566;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.563523631062;NFATC1..3:-0.574007380164;DBP:-0.581346922619;ZBTB6:-0.592525456448;RREB1:-0.599756724405;OCT4_SOX2{dimer}:-0.601192655906;TFCP2:-0.619657437824;SOX2:-0.642781938325;HIC1:-0.645908369228;SMAD1..7,9:-0.669281825517;GATA4:-0.6914163598;FOXO1,3,4:-0.6937350069;TFAP4:-0.69560105214;RFX1:-0.706210807622;KLF4:-0.729958603036;FOX{D1,D2}:-0.748457012946;EBF1:-0.749595167463;bHLH_family:-0.762538328543;TAL1_TCF{3,4,12}:-0.782952741799;NHLH1,2:-0.788021020015;CDC5L:-0.791482657146;ZNF238:-0.798571543;HLF:-0.798947569275;SREBF1,2:-0.80738962191;POU6F1:-0.814070913487;NFIL3:-0.814954200516;FOXD3:-0.816798487182;NR6A1:-0.835513850297;TBX4,5:-0.846302711853;RBPJ:-0.849648918368;MED-1{core}:-0.871144033859;IKZF1:-0.891211731682;NKX2-2,8:-0.893984962353;PPARG:-0.907102117805;SPZ1:-0.936053948517;PAX5:-1.00451699457;GTF2A1,2:-1.00900009128;HMGA1,2:-1.02388115215;MZF1:-1.03777150451;ALX4:-1.04845606851;TFAP2{A,C}:-1.06031102072;XBP1:-1.07361244618;MYBL2:-1.07571852689;HIF1A:-1.08852099177;LHX3,4:-1.0964389247;PATZ1:-1.12975306663;MAZ:-1.1528436423;XCPE1{core}:-1.1794992463;RXR{A,B,G}:-1.17978868443;GTF2I:-1.24457671838;SP1:-1.26080904581;HOX{A5,B5}:-1.28470610641;TLX1..3_NFIC{dimer}:-1.36832028467;HBP1_HMGB_SSRP1_UBTF:-1.3718083974;FOXL1:-1.50623407951;TEAD1:-1.58546837461;ADNP_IRX_SIX_ZHX:-1.61922131385 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10744-110C6;search_select_hide=table117:FF:10744-110C6 | |||
}} | }} |
Latest revision as of 15:02, 3 June 2020
Name: | mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11858 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11858
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11858
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0208 |
10 | 10 | 0.0219 |
100 | 100 | 0.325 |
101 | 101 | 0.114 |
102 | 102 | 0.358 |
103 | 103 | 0.0796 |
104 | 104 | 0.77 |
105 | 105 | 0.21 |
106 | 106 | 0.379 |
107 | 107 | 0.423 |
108 | 108 | 0.679 |
109 | 109 | 0.0165 |
11 | 11 | 0.113 |
110 | 110 | 0.409 |
111 | 111 | 0.0866 |
112 | 112 | 0.13 |
113 | 113 | 0.526 |
114 | 114 | 0.267 |
115 | 115 | 0.359 |
116 | 116 | 0.131 |
117 | 117 | 0.0259 |
118 | 118 | 0.904 |
119 | 119 | 0.126 |
12 | 12 | 0.396 |
120 | 120 | 0.539 |
121 | 121 | 0.389 |
122 | 122 | 0.218 |
123 | 123 | 2.20598e-4 |
124 | 124 | 0.218 |
125 | 125 | 0.299 |
126 | 126 | 0.809 |
127 | 127 | 0.115 |
128 | 128 | 0.779 |
129 | 129 | 0.285 |
13 | 13 | 0.254 |
130 | 130 | 0.548 |
131 | 131 | 0.98 |
132 | 132 | 0.501 |
133 | 133 | 0.564 |
134 | 134 | 0.578 |
135 | 135 | 0.0387 |
136 | 136 | 0.199 |
137 | 137 | 0.904 |
138 | 138 | 0.704 |
139 | 139 | 0.854 |
14 | 14 | 0.444 |
140 | 140 | 0.558 |
141 | 141 | 0.786 |
142 | 142 | 0.813 |
143 | 143 | 0.00195 |
144 | 144 | 0.282 |
145 | 145 | 0.803 |
146 | 146 | 0.308 |
147 | 147 | 0.0494 |
148 | 148 | 0.00492 |
149 | 149 | 0.379 |
15 | 15 | 0.136 |
150 | 150 | 0.428 |
151 | 151 | 0.93 |
152 | 152 | 0.938 |
153 | 153 | 0.599 |
154 | 154 | 0.556 |
155 | 155 | 0.187 |
156 | 156 | 0.207 |
157 | 157 | 0.445 |
158 | 158 | 0.732 |
159 | 159 | 0.124 |
16 | 16 | 0.686 |
160 | 160 | 0.323 |
161 | 161 | 0.225 |
162 | 162 | 0.129 |
163 | 163 | 0.417 |
164 | 164 | 0.52 |
165 | 165 | 0.781 |
166 | 166 | 0.642 |
167 | 167 | 0.407 |
168 | 168 | 0.827 |
169 | 169 | 0.997 |
17 | 17 | 0.534 |
18 | 18 | 0.494 |
19 | 19 | 0.837 |
2 | 2 | 0.678 |
20 | 20 | 0.424 |
21 | 21 | 0.208 |
22 | 22 | 0.815 |
23 | 23 | 0.381 |
24 | 24 | 0.295 |
25 | 25 | 0.0563 |
26 | 26 | 0.124 |
27 | 27 | 0.371 |
28 | 28 | 0.332 |
29 | 29 | 0.0152 |
3 | 3 | 0.203 |
30 | 30 | 0.0387 |
31 | 31 | 0.773 |
32 | 32 | 0.511 |
33 | 33 | 0.915 |
34 | 34 | 0.488 |
35 | 35 | 0.513 |
36 | 36 | 0.0228 |
37 | 37 | 0.112 |
38 | 38 | 0.91 |
39 | 39 | 0.316 |
4 | 4 | 0.106 |
40 | 40 | 0.223 |
41 | 41 | 0.794 |
42 | 42 | 0.0894 |
43 | 43 | 0.453 |
44 | 44 | 0.033 |
45 | 45 | 0.225 |
46 | 46 | 0.309 |
47 | 47 | 0.12 |
48 | 48 | 0.356 |
49 | 49 | 0.252 |
5 | 5 | 0.794 |
50 | 50 | 0.569 |
51 | 51 | 0.534 |
52 | 52 | 0.503 |
53 | 53 | 0.324 |
54 | 54 | 0.819 |
55 | 55 | 0.0494 |
56 | 56 | 0.899 |
57 | 57 | 0.27 |
58 | 58 | 0.0639 |
59 | 59 | 0.672 |
6 | 6 | 0.827 |
60 | 60 | 0.616 |
61 | 61 | 0.444 |
62 | 62 | 0.0831 |
63 | 63 | 0.975 |
64 | 64 | 0.159 |
65 | 65 | 0.718 |
66 | 66 | 0.0148 |
67 | 67 | 0.158 |
68 | 68 | 0.134 |
69 | 69 | 0.273 |
7 | 7 | 0.285 |
70 | 70 | 0.465 |
71 | 71 | 0.0309 |
72 | 72 | 0.3 |
73 | 73 | 0.357 |
74 | 74 | 0.395 |
75 | 75 | 0.114 |
76 | 76 | 0.748 |
77 | 77 | 0.348 |
78 | 78 | 0.0147 |
79 | 79 | 0.451 |
8 | 8 | 0.406 |
80 | 80 | 0.396 |
81 | 81 | 0.273 |
82 | 82 | 0.53 |
83 | 83 | 0.0818 |
84 | 84 | 0.1 |
85 | 85 | 0.99 |
86 | 86 | 0.135 |
87 | 87 | 0.0246 |
88 | 88 | 0.488 |
89 | 89 | 0.494 |
9 | 9 | 0.926 |
90 | 90 | 0.666 |
91 | 91 | 0.838 |
92 | 92 | 0.581 |
93 | 93 | 0.154 |
94 | 94 | 0.457 |
95 | 95 | 0.00261 |
96 | 96 | 0.023 |
97 | 97 | 0.132 |
98 | 98 | 0.997 |
99 | 99 | 0.0934 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11858
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:8691 mycosis fungoides
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0103212 T-lymphoma cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000084 (T cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
0060058 (lymphoma)
0060060 (non-Hodgkin lymphoma)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
0060061 (cutaneous T cell lymphoma)
8691 (mycosis fungoides)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100104 (lymphoma cell line sample)
0103212 (T-lymphoma cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)