FF:10728-110A8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005035 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL: | |accession_numbers=CAGE;DRX007967;DRR008839;DRZ000264;DRZ001649;DRZ011614;DRZ012999 | ||
|ancestors_in_disease_facet=DOID:0050686,DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002384,UBERON:0000013,UBERON:0003714,UBERON:0000479,UBERON:0004121,UBERON:0011216,UBERON:0002410,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000010,UBERON:0001016 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000333,CL:0000003,CL:0000548,CL:0002321,CL:0000219,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:3093,DOID:0050687,DOID:171,DOID:3095,DOID:1192,DOID:2994,DOID:1115,DOID:169,DOID:3193,DOID:962 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100400,FF:0100932,FF:0102912,FF:0104785,FF:0102914 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100400,FF:0100932,FF:0102912 | |fonse_cell_line=FF:0100400,FF:0100932,FF:0102912 | ||
|fonse_cell_line_closure=FF:0100400,FF:0100932,FF:0102912 | |fonse_cell_line_closure=FF:0100400,FF:0100932,FF:0102912 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroepithelioma%2520cell%2520line%253aSK-N-MC.CNhs11853.10728-110A8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroepithelioma%2520cell%2520line%253aSK-N-MC.CNhs11853.10728-110A8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroepithelioma%2520cell%2520line%253aSK-N-MC.CNhs11853.10728-110A8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroepithelioma%2520cell%2520line%253aSK-N-MC.CNhs11853.10728-110A8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroepithelioma%2520cell%2520line%253aSK-N-MC.CNhs11853.10728-110A8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10728-110A8 | |id=FF:10728-110A8 | ||
|is_a=DOID:962;;EFO:0002091;;FF: | |is_a=DOID:962;;EFO:0002091;;FF:0000210;;FF:0102914 | ||
|is_obsolete= | |||
|library_id=CNhs11853 | |||
|library_id_phase_based=2:CNhs11853 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10728 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10728 | |||
|name=neuroepithelioma cell line:SK-N-MC | |name=neuroepithelioma cell line:SK-N-MC | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11853,LSID830,release010,COMPLETED | |profile_hcage=CNhs11853,LSID830,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.0820861103611685,0.063159935035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172457302340972,0,0,0,0,0,0.0947892915768644,0,0,0.192823722910538,0,0,0,0,0,0,0,0,0,0,0,0,0.252961282171967,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,1.10488105064908,0,0,-0.0969923612426051,0,0,0.095403560631825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00119030225723904,-0.0590201020823189,0,0,0,0.188287509554502,0.00254035731576163,0,0.3257803126894,0,0,-0.0980353512377064,0.120786549466266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.020385681949392,0,0,0,0,0,0 | |||
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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=19.20051 | |rna_weight_ug=19.20051 | ||
|sample_age=14 | |sample_age=14 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=HTB-10 | |sample_cell_catalog=HTB-10 | ||
|sample_cell_line=SK-N-MC | |sample_cell_line=SK-N-MC | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.90252830988778e-269!GO:0043231;intracellular membrane-bound organelle;1.86983865652576e-240!GO:0043227;membrane-bound organelle;1.86983865652576e-240!GO:0043226;organelle;1.73374270085716e-235!GO:0043229;intracellular organelle;4.90525035134867e-235!GO:0044422;organelle part;6.58327298118457e-155!GO:0044446;intracellular organelle part;2.03475047756086e-153!GO:0005737;cytoplasm;1.19424143201545e-146!GO:0005634;nucleus;4.73674646178686e-130!GO:0032991;macromolecular complex;5.06688629853501e-109!GO:0044237;cellular metabolic process;3.23017539126116e-106!GO:0043170;macromolecule metabolic process;4.15807349128873e-106!GO:0044238;primary metabolic process;2.02704046803257e-104!GO:0044444;cytoplasmic part;6.10197973962345e-102!GO:0044428;nuclear part;6.92429607305876e-96!GO:0030529;ribonucleoprotein complex;5.04697394756073e-92!GO:0043233;organelle lumen;3.12985699491202e-86!GO:0031974;membrane-enclosed lumen;3.12985699491202e-86!GO:0003723;RNA binding;3.71304267620537e-84!GO:0043283;biopolymer metabolic process;3.06590281349413e-77!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.46931551784744e-75!GO:0005515;protein binding;8.05135146974161e-75!GO:0010467;gene expression;2.74629301530748e-74!GO:0031981;nuclear lumen;1.83004430900539e-60!GO:0005739;mitochondrion;7.39807334088344e-59!GO:0006396;RNA processing;1.00039491207631e-58!GO:0003676;nucleic acid binding;2.58041556705304e-55!GO:0043234;protein complex;8.28759604017596e-55!GO:0005840;ribosome;1.27213832088455e-53!GO:0006412;translation;1.52521568491411e-49!GO:0016043;cellular component organization and biogenesis;2.46600022448429e-49!GO:0006259;DNA metabolic process;1.72266118631621e-47!GO:0003735;structural constituent of ribosome;2.86119723679293e-46!GO:0016071;mRNA metabolic process;9.10755927952895e-45!GO:0031090;organelle membrane;8.31052937646038e-44!GO:0016070;RNA metabolic process;2.33243805694277e-43!GO:0008380;RNA splicing;8.39427934650577e-41!GO:0033279;ribosomal subunit;1.07331447733766e-40!GO:0006996;organelle organization and biogenesis;3.28919727003269e-40!GO:0019538;protein metabolic process;4.80514171175806e-40!GO:0044429;mitochondrial part;8.33318207666645e-40!GO:0005654;nucleoplasm;3.22728110552311e-39!GO:0031967;organelle envelope;9.87366988761947e-39!GO:0031975;envelope;2.29159097953409e-38!GO:0043228;non-membrane-bound organelle;4.61783283891207e-38!GO:0043232;intracellular non-membrane-bound organelle;4.61783283891207e-38!GO:0033036;macromolecule localization;7.30573331226585e-38!GO:0006397;mRNA processing;8.78919405441637e-38!GO:0015031;protein transport;3.13088561852306e-37!GO:0044267;cellular protein metabolic process;2.71880725960766e-36!GO:0044260;cellular macromolecule metabolic process;4.88328042882906e-36!GO:0007049;cell cycle;2.08763879656635e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.70543304392892e-34!GO:0009059;macromolecule biosynthetic process;2.67170413797825e-34!GO:0044249;cellular biosynthetic process;6.7721754571529e-34!GO:0046907;intracellular transport;1.58941463584191e-33!GO:0008104;protein localization;2.39093874174659e-33!GO:0065003;macromolecular complex assembly;5.25767978813958e-33!GO:0045184;establishment of protein localization;1.6483967251958e-32!GO:0044451;nucleoplasm part;4.22166762313451e-32!GO:0009058;biosynthetic process;1.62074333066525e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.33063306274047e-29!GO:0022607;cellular component assembly;1.25550782751731e-28!GO:0005681;spliceosome;8.25129504365123e-28!GO:0005829;cytosol;3.25061113050952e-27!GO:0000166;nucleotide binding;3.96470560267999e-27!GO:0006886;intracellular protein transport;5.11971792401935e-27!GO:0022402;cell cycle process;2.67493452943924e-26!GO:0006974;response to DNA damage stimulus;2.56834245697733e-25!GO:0005740;mitochondrial envelope;3.09951895870217e-25!GO:0019866;organelle inner membrane;5.71217355833363e-25!GO:0005694;chromosome;7.07129777217851e-25!GO:0000278;mitotic cell cycle;1.0791493336975e-24!GO:0031966;mitochondrial membrane;2.0885513393617e-24!GO:0005730;nucleolus;3.85464808714635e-24!GO:0044445;cytosolic part;2.80496438992128e-23!GO:0051276;chromosome organization and biogenesis;3.44524011492359e-23!GO:0005743;mitochondrial inner membrane;9.7288390009963e-23!GO:0051649;establishment of cellular localization;1.67223025326257e-22!GO:0015934;large ribosomal subunit;2.33490615118323e-22!GO:0006281;DNA repair;3.40813853286699e-22!GO:0051641;cellular localization;6.34868146309229e-22!GO:0006260;DNA replication;7.44022895156728e-22!GO:0016462;pyrophosphatase activity;1.28784171182686e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.02211135999821e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;2.76706039801898e-21!GO:0044455;mitochondrial membrane part;5.10457785230842e-21!GO:0017111;nucleoside-triphosphatase activity;6.86789768791248e-21!GO:0008134;transcription factor binding;1.37817584007828e-20!GO:0006119;oxidative phosphorylation;2.22686934523263e-20!GO:0044427;chromosomal part;2.64752347688038e-20!GO:0022618;protein-RNA complex assembly;3.18778425358539e-20!GO:0016874;ligase activity;6.52107207212936e-20!GO:0022403;cell cycle phase;6.55728877416387e-20!GO:0015935;small ribosomal subunit;1.75131780146059e-19!GO:0009719;response to endogenous stimulus;4.42855019841913e-19!GO:0006512;ubiquitin cycle;4.7924257709649e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;5.30912553149687e-19!GO:0006457;protein folding;5.36703645349577e-19!GO:0000087;M phase of mitotic cell cycle;1.40384116140149e-18!GO:0007067;mitosis;2.91382282597236e-18!GO:0051301;cell division;3.47359713672313e-18!GO:0006323;DNA packaging;4.7729385396608e-18!GO:0006605;protein targeting;1.30790608873241e-17!GO:0031980;mitochondrial lumen;1.37503589369247e-17!GO:0005759;mitochondrial matrix;1.37503589369247e-17!GO:0032553;ribonucleotide binding;1.62346307454346e-17!GO:0032555;purine ribonucleotide binding;1.62346307454346e-17!GO:0006366;transcription from RNA polymerase II promoter;1.84132519137894e-17!GO:0012505;endomembrane system;2.08636590767768e-17!GO:0005524;ATP binding;5.30050271726443e-17!GO:0032559;adenyl ribonucleotide binding;6.66160255486692e-17!GO:0017076;purine nucleotide binding;1.39253104700984e-16!GO:0008135;translation factor activity, nucleic acid binding;1.84526533906236e-16!GO:0044265;cellular macromolecule catabolic process;2.57579669908525e-16!GO:0016887;ATPase activity;4.19731717074082e-16!GO:0005746;mitochondrial respiratory chain;5.57443331411061e-16!GO:0000279;M phase;8.47525764414474e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;9.17389173567257e-16!GO:0030554;adenyl nucleotide binding;1.07917926873102e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.39922284883706e-15!GO:0044257;cellular protein catabolic process;1.40231918270033e-15!GO:0042623;ATPase activity, coupled;1.46399239915566e-15!GO:0019941;modification-dependent protein catabolic process;1.60831673269041e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.60831673269041e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.01813575404224e-15!GO:0006913;nucleocytoplasmic transport;3.49578568911493e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.34310991714688e-15!GO:0000375;RNA splicing, via transesterification reactions;4.34310991714688e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.34310991714688e-15!GO:0019222;regulation of metabolic process;4.69522492647192e-15!GO:0043285;biopolymer catabolic process;4.73471469898657e-15!GO:0005761;mitochondrial ribosome;7.32109818906365e-15!GO:0000313;organellar ribosome;7.32109818906365e-15!GO:0050136;NADH dehydrogenase (quinone) activity;8.74014252514261e-15!GO:0003954;NADH dehydrogenase activity;8.74014252514261e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.74014252514261e-15!GO:0051169;nuclear transport;9.46740848572262e-15!GO:0042254;ribosome biogenesis and assembly;1.24928543306512e-14!GO:0031965;nuclear membrane;1.69180246316961e-14!GO:0050794;regulation of cellular process;1.73772468997629e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.62367266220958e-14!GO:0043412;biopolymer modification;4.56247245342752e-14!GO:0005635;nuclear envelope;4.87091253151523e-14!GO:0051726;regulation of cell cycle;5.50453260874009e-14!GO:0000074;regulation of progression through cell cycle;6.26673588222532e-14!GO:0051082;unfolded protein binding;6.53934821540278e-14!GO:0044453;nuclear membrane part;1.10325865608866e-13!GO:0009057;macromolecule catabolic process;1.17420343183649e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.39689573677181e-13!GO:0006350;transcription;2.41139885867857e-13!GO:0016568;chromatin modification;3.03190340273456e-13!GO:0016604;nuclear body;3.45520087213722e-13!GO:0003712;transcription cofactor activity;4.21399103717e-13!GO:0006399;tRNA metabolic process;4.32448731713022e-13!GO:0048770;pigment granule;4.56836377499535e-13!GO:0042470;melanosome;4.56836377499535e-13!GO:0017038;protein import;5.30809370116221e-13!GO:0005643;nuclear pore;8.54915069311676e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.20999818159479e-12!GO:0045271;respiratory chain complex I;1.20999818159479e-12!GO:0005747;mitochondrial respiratory chain complex I;1.20999818159479e-12!GO:0003743;translation initiation factor activity;1.23649103364252e-12!GO:0048193;Golgi vesicle transport;1.2501751093768e-12!GO:0005667;transcription factor complex;1.75375933229555e-12!GO:0030163;protein catabolic process;1.87178900087237e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.12763994273498e-12!GO:0042773;ATP synthesis coupled electron transport;2.12763994273498e-12!GO:0031323;regulation of cellular metabolic process;2.13230833413548e-12!GO:0044432;endoplasmic reticulum part;2.27809673171909e-12!GO:0005783;endoplasmic reticulum;3.05645309482434e-12!GO:0004386;helicase activity;3.29886584970044e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.10162660981575e-12!GO:0006413;translational initiation;4.55731484733122e-12!GO:0006446;regulation of translational initiation;9.12591198252482e-12!GO:0006464;protein modification process;1.06400618843005e-11!GO:0050657;nucleic acid transport;1.31406916204962e-11!GO:0051236;establishment of RNA localization;1.31406916204962e-11!GO:0050658;RNA transport;1.31406916204962e-11!GO:0006403;RNA localization;1.84551658361069e-11!GO:0000502;proteasome complex (sensu Eukaryota);2.01511995499236e-11!GO:0065004;protein-DNA complex assembly;2.30320334438088e-11!GO:0000785;chromatin;2.63426332173415e-11!GO:0008026;ATP-dependent helicase activity;3.43111591962648e-11!GO:0044248;cellular catabolic process;4.58013436645951e-11!GO:0051186;cofactor metabolic process;4.89509229603159e-11!GO:0006333;chromatin assembly or disassembly;5.53814396210111e-11!GO:0010468;regulation of gene expression;6.69627375015944e-11!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.7801410144084e-11!GO:0006261;DNA-dependent DNA replication;7.02147896983845e-11!GO:0043687;post-translational protein modification;7.722253270687e-11!GO:0046930;pore complex;1.07505343966194e-10!GO:0032774;RNA biosynthetic process;1.65767030535652e-10!GO:0008639;small protein conjugating enzyme activity;1.79820276484505e-10!GO:0050789;regulation of biological process;2.01109357651586e-10!GO:0005794;Golgi apparatus;2.07776798838852e-10!GO:0008565;protein transporter activity;2.26734670018269e-10!GO:0016607;nuclear speck;2.28278115740664e-10!GO:0006351;transcription, DNA-dependent;2.45650094711839e-10!GO:0004842;ubiquitin-protein ligase activity;3.31427242847282e-10!GO:0006364;rRNA processing;3.68342284114026e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.10471048917379e-10!GO:0019787;small conjugating protein ligase activity;5.94786523020454e-10!GO:0015630;microtubule cytoskeleton;5.95394672592813e-10!GO:0043566;structure-specific DNA binding;6.31335175351387e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.99850440393955e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.59039788250557e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.89681398089493e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.89681398089493e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.89681398089493e-10!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.6861493173701e-10!GO:0016072;rRNA metabolic process;1.10682350198236e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.31630593356413e-09!GO:0003677;DNA binding;1.34130531715815e-09!GO:0051028;mRNA transport;1.40862538894378e-09!GO:0006606;protein import into nucleus;2.12476413622356e-09!GO:0043038;amino acid activation;3.30852956081919e-09!GO:0006418;tRNA aminoacylation for protein translation;3.30852956081919e-09!GO:0043039;tRNA aminoacylation;3.30852956081919e-09!GO:0065002;intracellular protein transport across a membrane;3.34838794564633e-09!GO:0051170;nuclear import;3.83295669794211e-09!GO:0016881;acid-amino acid ligase activity;4.00974215137375e-09!GO:0016192;vesicle-mediated transport;4.79325613229645e-09!GO:0045449;regulation of transcription;5.15287407728546e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.36057129487388e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.66652219460796e-09!GO:0005789;endoplasmic reticulum membrane;1.00244502433929e-08!GO:0051329;interphase of mitotic cell cycle;1.08547536518737e-08!GO:0006163;purine nucleotide metabolic process;1.31540619017815e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.48278102486946e-08!GO:0006732;coenzyme metabolic process;1.55578413329334e-08!GO:0003697;single-stranded DNA binding;2.29825250026903e-08!GO:0005768;endosome;2.33904098720229e-08!GO:0006164;purine nucleotide biosynthetic process;2.39824002407606e-08!GO:0005657;replication fork;2.87202793870547e-08!GO:0000775;chromosome, pericentric region;3.08520749971953e-08!GO:0009259;ribonucleotide metabolic process;3.33885185323679e-08!GO:0000245;spliceosome assembly;3.87337695985527e-08!GO:0019829;cation-transporting ATPase activity;4.43391313845113e-08!GO:0016779;nucleotidyltransferase activity;5.26716484938494e-08!GO:0032446;protein modification by small protein conjugation;5.53841695787626e-08!GO:0000075;cell cycle checkpoint;5.55108866073829e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.06662475249281e-08!GO:0009150;purine ribonucleotide metabolic process;7.18859719528395e-08!GO:0005819;spindle;7.47237739193254e-08!GO:0009260;ribonucleotide biosynthetic process;9.36240522689686e-08!GO:0051325;interphase;9.42843721591351e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.24953897229014e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.31048392383924e-07!GO:0031324;negative regulation of cellular metabolic process;1.31491996317118e-07!GO:0006355;regulation of transcription, DNA-dependent;1.40115828207621e-07!GO:0015986;ATP synthesis coupled proton transport;1.40289428129794e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.40289428129794e-07!GO:0016567;protein ubiquitination;1.64360142855665e-07!GO:0006461;protein complex assembly;1.78069124482588e-07!GO:0007005;mitochondrion organization and biogenesis;2.01442675577775e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.9373324291436e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.9373324291436e-07!GO:0009141;nucleoside triphosphate metabolic process;3.06106864450442e-07!GO:0031497;chromatin assembly;3.0933263324505e-07!GO:0005813;centrosome;3.09786394688156e-07!GO:0009199;ribonucleoside triphosphate metabolic process;3.33557541834189e-07!GO:0008094;DNA-dependent ATPase activity;4.40319567213087e-07!GO:0016564;transcription repressor activity;4.63997342118725e-07!GO:0006334;nucleosome assembly;4.67799908703562e-07!GO:0016740;transferase activity;5.17799067722881e-07!GO:0005793;ER-Golgi intermediate compartment;5.89813922534609e-07!GO:0000151;ubiquitin ligase complex;6.45294193625356e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.73728496686281e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.73728496686281e-07!GO:0003899;DNA-directed RNA polymerase activity;6.93013176439469e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.29362600066239e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.29362600066239e-07!GO:0005815;microtubule organizing center;7.94509168706045e-07!GO:0009055;electron carrier activity;8.33758558941134e-07!GO:0043623;cellular protein complex assembly;9.01278338550318e-07!GO:0006754;ATP biosynthetic process;1.23655238002864e-06!GO:0006753;nucleoside phosphate metabolic process;1.23655238002864e-06!GO:0016481;negative regulation of transcription;1.36458573284886e-06!GO:0012501;programmed cell death;1.37558062718103e-06!GO:0045786;negative regulation of progression through cell cycle;1.3872241116705e-06!GO:0003714;transcription corepressor activity;1.64895465901523e-06!GO:0009060;aerobic respiration;1.65398538374556e-06!GO:0045259;proton-transporting ATP synthase complex;1.70164203344283e-06!GO:0046034;ATP metabolic process;1.85355319285524e-06!GO:0048523;negative regulation of cellular process;1.8839759783491e-06!GO:0051188;cofactor biosynthetic process;2.03670845969399e-06!GO:0016563;transcription activator activity;2.23926276365095e-06!GO:0044440;endosomal part;2.47331094134219e-06!GO:0010008;endosome membrane;2.47331094134219e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.90196843899093e-06!GO:0009892;negative regulation of metabolic process;3.07275325820507e-06!GO:0006915;apoptosis;3.08412143695262e-06!GO:0007051;spindle organization and biogenesis;3.13952415269983e-06!GO:0003713;transcription coactivator activity;3.1552069230822e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.21342914109515e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.63396006774489e-06!GO:0003684;damaged DNA binding;4.18383356808894e-06!GO:0005762;mitochondrial large ribosomal subunit;4.23191394639154e-06!GO:0000315;organellar large ribosomal subunit;4.23191394639154e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.64744671617534e-06!GO:0003682;chromatin binding;4.99558491355127e-06!GO:0051168;nuclear export;5.3742790475695e-06!GO:0008219;cell death;5.80002948034502e-06!GO:0016265;death;5.80002948034502e-06!GO:0006099;tricarboxylic acid cycle;1.0776701860914e-05!GO:0046356;acetyl-CoA catabolic process;1.0776701860914e-05!GO:0006302;double-strand break repair;1.14571971991816e-05!GO:0005770;late endosome;1.15404671491217e-05!GO:0006793;phosphorus metabolic process;1.23902620237274e-05!GO:0006796;phosphate metabolic process;1.23902620237274e-05!GO:0003724;RNA helicase activity;1.28974152407071e-05!GO:0003690;double-stranded DNA binding;1.51072326321494e-05!GO:0044452;nucleolar part;1.53262922930415e-05!GO:0019899;enzyme binding;1.70297836966489e-05!GO:0045333;cellular respiration;1.7318211606936e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.80111413101636e-05!GO:0006752;group transfer coenzyme metabolic process;1.92939854509398e-05!GO:0006084;acetyl-CoA metabolic process;1.98752106571186e-05!GO:0006383;transcription from RNA polymerase III promoter;2.19919938118689e-05!GO:0005788;endoplasmic reticulum lumen;2.58099654968081e-05!GO:0000314;organellar small ribosomal subunit;2.72677894581181e-05!GO:0005763;mitochondrial small ribosomal subunit;2.72677894581181e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.78085040873112e-05!GO:0005769;early endosome;2.95584774022859e-05!GO:0065007;biological regulation;3.00065162215233e-05!GO:0051187;cofactor catabolic process;3.03610613990912e-05!GO:0008168;methyltransferase activity;3.24458728109098e-05!GO:0009109;coenzyme catabolic process;3.24458728109098e-05!GO:0008033;tRNA processing;3.27528470636203e-05!GO:0016310;phosphorylation;3.30676696587291e-05!GO:0051052;regulation of DNA metabolic process;3.32113974136263e-05!GO:0003729;mRNA binding;3.37611927780759e-05!GO:0051246;regulation of protein metabolic process;4.23822053377238e-05!GO:0009056;catabolic process;4.4127074514504e-05!GO:0009108;coenzyme biosynthetic process;4.45974476274422e-05!GO:0006310;DNA recombination;4.56339958069727e-05!GO:0048519;negative regulation of biological process;4.74860738036987e-05!GO:0044431;Golgi apparatus part;5.05763931199683e-05!GO:0006613;cotranslational protein targeting to membrane;5.21845199014258e-05!GO:0007017;microtubule-based process;5.42319403021282e-05!GO:0051427;hormone receptor binding;7.94368908889876e-05!GO:0003702;RNA polymerase II transcription factor activity;8.52022691315647e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.63391358575107e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.63391358575107e-05!GO:0003678;DNA helicase activity;8.84338814702165e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.50199925722685e-05!GO:0006352;transcription initiation;9.84497497503612e-05!GO:0043021;ribonucleoprotein binding;0.000103501284513335!GO:0006270;DNA replication initiation;0.000105736612552494!GO:0016853;isomerase activity;0.000109722538734839!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000116190164734753!GO:0035257;nuclear hormone receptor binding;0.000163534445696208!GO:0015631;tubulin binding;0.000165059076868384!GO:0005874;microtubule;0.000169750453704034!GO:0006338;chromatin remodeling;0.000181106892910054!GO:0006402;mRNA catabolic process;0.000181106892910054!GO:0032508;DNA duplex unwinding;0.000181550451314764!GO:0032392;DNA geometric change;0.000181550451314764!GO:0000776;kinetochore;0.000187557043731462!GO:0006284;base-excision repair;0.000191510154386543!GO:0031072;heat shock protein binding;0.000201965488397687!GO:0030120;vesicle coat;0.000204033977711271!GO:0030662;coated vesicle membrane;0.000204033977711271!GO:0006268;DNA unwinding during replication;0.000212480195457934!GO:0006839;mitochondrial transport;0.000213142750107553!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000218257540712078!GO:0000059;protein import into nucleus, docking;0.000280000111329351!GO:0048475;coated membrane;0.000286025939034556!GO:0030117;membrane coat;0.000286025939034556!GO:0045454;cell redox homeostasis;0.000292874585729678!GO:0007010;cytoskeleton organization and biogenesis;0.000292874585729678!GO:0007088;regulation of mitosis;0.00030498261755855!GO:0006401;RNA catabolic process;0.000322335315143397!GO:0043681;protein import into mitochondrion;0.000326869152566994!GO:0006916;anti-apoptosis;0.000331591408324208!GO:0008654;phospholipid biosynthetic process;0.000335420727220434!GO:0005798;Golgi-associated vesicle;0.000347544474903828!GO:0051101;regulation of DNA binding;0.000377786746073094!GO:0048471;perinuclear region of cytoplasm;0.000393551577676258!GO:0031988;membrane-bound vesicle;0.00042400360550872!GO:0045892;negative regulation of transcription, DNA-dependent;0.000453678298982096!GO:0016363;nuclear matrix;0.000459852072358853!GO:0008186;RNA-dependent ATPase activity;0.000500821367943467!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000525323333705379!GO:0008250;oligosaccharyl transferase complex;0.000525323333705379!GO:0016023;cytoplasmic membrane-bound vesicle;0.000526407538552922!GO:0000082;G1/S transition of mitotic cell cycle;0.000556086018681604!GO:0006405;RNA export from nucleus;0.000563772286848387!GO:0000139;Golgi membrane;0.000617539511064683!GO:0008139;nuclear localization sequence binding;0.000621052023745186!GO:0043069;negative regulation of programmed cell death;0.000630879186659077!GO:0005839;proteasome core complex (sensu Eukaryota);0.00069830538407668!GO:0007093;mitotic cell cycle checkpoint;0.000700840176525097!GO:0016787;hydrolase activity;0.000702642476638569!GO:0009117;nucleotide metabolic process;0.000702642476638569!GO:0007006;mitochondrial membrane organization and biogenesis;0.000705954548747736!GO:0003924;GTPase activity;0.000707952531498404!GO:0000228;nuclear chromosome;0.000720990885524363!GO:0004576;oligosaccharyl transferase activity;0.000725626813170416!GO:0043066;negative regulation of apoptosis;0.000763550295635655!GO:0031982;vesicle;0.000784037366766465!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000797343639191413!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000818549432323088!GO:0006414;translational elongation;0.000830342852303572!GO:0030880;RNA polymerase complex;0.000832350819068082!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000842665837183978!GO:0015399;primary active transmembrane transporter activity;0.000842665837183978!GO:0005876;spindle microtubule;0.00084867545309999!GO:0000049;tRNA binding;0.000912758809130678!GO:0033116;ER-Golgi intermediate compartment membrane;0.00094779847916249!GO:0000792;heterochromatin;0.000971389071620608!GO:0006611;protein export from nucleus;0.00101431503398601!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00102301562197845!GO:0043414;biopolymer methylation;0.00102642045828357!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0010502691153573!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00108203239932577!GO:0042981;regulation of apoptosis;0.00114879020812152!GO:0031410;cytoplasmic vesicle;0.00117011445255761!GO:0043067;regulation of programmed cell death;0.00119551655643104!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00136329365234714!GO:0008276;protein methyltransferase activity;0.00137512605176718!GO:0007059;chromosome segregation;0.00139742630427101!GO:0004004;ATP-dependent RNA helicase activity;0.00140646901527616!GO:0006612;protein targeting to membrane;0.00147396726659661!GO:0043596;nuclear replication fork;0.00156614750704536!GO:0006626;protein targeting to mitochondrion;0.00158043657266596!GO:0006275;regulation of DNA replication;0.00163393741040871!GO:0016859;cis-trans isomerase activity;0.00166663453882361!GO:0032200;telomere organization and biogenesis;0.00170069075949369!GO:0000723;telomere maintenance;0.00170069075949369!GO:0000725;recombinational repair;0.00171986953649351!GO:0000724;double-strand break repair via homologous recombination;0.00171986953649351!GO:0007050;cell cycle arrest;0.00179339287913755!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00180707304560638!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00180707304560638!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00180707304560638!GO:0004298;threonine endopeptidase activity;0.00191860175922923!GO:0000786;nucleosome;0.00191860175922923!GO:0007052;mitotic spindle organization and biogenesis;0.00192112916417112!GO:0043624;cellular protein complex disassembly;0.00196445412435881!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00196445412435881!GO:0000428;DNA-directed RNA polymerase complex;0.00196445412435881!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00206511237415047!GO:0004527;exonuclease activity;0.00212722480629979!GO:0000084;S phase of mitotic cell cycle;0.00215551905114847!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00217895301503461!GO:0042802;identical protein binding;0.00221478386292728!GO:0000922;spindle pole;0.00221901528041541!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00227458381765269!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00227458381765269!GO:0005048;signal sequence binding;0.00228949559288429!GO:0051920;peroxiredoxin activity;0.00232471594908886!GO:0031570;DNA integrity checkpoint;0.00253316435539841!GO:0031252;leading edge;0.00259184372758715!GO:0032259;methylation;0.00273801194496414!GO:0008017;microtubule binding;0.00273801194496414!GO:0051320;S phase;0.00278888170397736!GO:0030867;rough endoplasmic reticulum membrane;0.00278888170397736!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00280353229564657!GO:0043492;ATPase activity, coupled to movement of substances;0.00282881371363617!GO:0005741;mitochondrial outer membrane;0.00287527336077418!GO:0051789;response to protein stimulus;0.00287527336077418!GO:0006986;response to unfolded protein;0.00287527336077418!GO:0045045;secretory pathway;0.00292725792419583!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00296386030011585!GO:0031968;organelle outer membrane;0.00306365700099824!GO:0003746;translation elongation factor activity;0.00316218125945034!GO:0004674;protein serine/threonine kinase activity;0.00337170256026071!GO:0065009;regulation of a molecular function;0.00363842066130192!GO:0046474;glycerophospholipid biosynthetic process;0.00363842066130192!GO:0051098;regulation of binding;0.00367309528498605!GO:0016251;general RNA polymerase II transcription factor activity;0.00370804580067921!GO:0005684;U2-dependent spliceosome;0.00372804572312109!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00378175146739323!GO:0051087;chaperone binding;0.00386426801009975!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00390584815450179!GO:0006892;post-Golgi vesicle-mediated transport;0.00415186027447904!GO:0006607;NLS-bearing substrate import into nucleus;0.00435053972395058!GO:0031124;mRNA 3'-end processing;0.00440574286140684!GO:0016272;prefoldin complex;0.00446384652902857!GO:0043189;H4/H2A histone acetyltransferase complex;0.00453550625064373!GO:0003711;transcription elongation regulator activity;0.00457477536598628!GO:0018196;peptidyl-asparagine modification;0.00458650333068507!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00458650333068507!GO:0006891;intra-Golgi vesicle-mediated transport;0.00466506006904049!GO:0006289;nucleotide-excision repair;0.00483186989948179!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00483186989948179!GO:0005791;rough endoplasmic reticulum;0.00483186989948179!GO:0048500;signal recognition particle;0.00484092572150393!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00488308356479541!GO:0019867;outer membrane;0.00490532114915495!GO:0032984;macromolecular complex disassembly;0.00503319986730077!GO:0000910;cytokinesis;0.00552328611411572!GO:0031901;early endosome membrane;0.00552843382166487!GO:0007004;telomere maintenance via telomerase;0.00589971821964127!GO:0043241;protein complex disassembly;0.00628369230162946!GO:0040029;regulation of gene expression, epigenetic;0.00631238718668385!GO:0004518;nuclease activity;0.00631238718668385!GO:0043284;biopolymer biosynthetic process;0.00646546550807576!GO:0008022;protein C-terminus binding;0.00654031298906631!GO:0006818;hydrogen transport;0.00684589390497493!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00693094280832788!GO:0046966;thyroid hormone receptor binding;0.00693271427897232!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00710255004888034!GO:0019843;rRNA binding;0.00714138548000853!GO:0005637;nuclear inner membrane;0.00720639112623971!GO:0046489;phosphoinositide biosynthetic process;0.00751502497086646!GO:0015980;energy derivation by oxidation of organic compounds;0.00754774953835009!GO:0030036;actin cytoskeleton organization and biogenesis;0.00789105868241646!GO:0004003;ATP-dependent DNA helicase activity;0.00791589265661415!GO:0005905;coated pit;0.0079600462612537!GO:0045893;positive regulation of transcription, DNA-dependent;0.00806648859423427!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00840889653424892!GO:0015002;heme-copper terminal oxidase activity;0.00840889653424892!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00840889653424892!GO:0004129;cytochrome-c oxidase activity;0.00840889653424892!GO:0000123;histone acetyltransferase complex;0.00850116678601785!GO:0007265;Ras protein signal transduction;0.00864860555509119!GO:0015992;proton transport;0.00866818069226438!GO:0007346;regulation of progression through mitotic cell cycle;0.00876220572033657!GO:0005669;transcription factor TFIID complex;0.00882945092348007!GO:0051053;negative regulation of DNA metabolic process;0.00900563014754437!GO:0043601;nuclear replisome;0.00905980289744666!GO:0030894;replisome;0.00905980289744666!GO:0031902;late endosome membrane;0.00915233927651471!GO:0035267;NuA4 histone acetyltransferase complex;0.00927682750712883!GO:0007264;small GTPase mediated signal transduction;0.00942174103624567!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00958215927837154!GO:0000790;nuclear chromatin;0.00993144401904831!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0100974407222506!GO:0042770;DNA damage response, signal transduction;0.0101908220735323!GO:0005525;GTP binding;0.0101953577599197!GO:0008312;7S RNA binding;0.0102394577967621!GO:0003756;protein disulfide isomerase activity;0.01050959825133!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.01050959825133!GO:0000339;RNA cap binding;0.0107314151395168!GO:0000077;DNA damage checkpoint;0.0107314151395168!GO:0043022;ribosome binding;0.0108517028655207!GO:0003725;double-stranded RNA binding;0.0108877836901013!GO:0022890;inorganic cation transmembrane transporter activity;0.011011529301911!GO:0005832;chaperonin-containing T-complex;0.0110921119298931!GO:0051252;regulation of RNA metabolic process;0.0111039248947624!GO:0045941;positive regulation of transcription;0.0112697850554935!GO:0005663;DNA replication factor C complex;0.0113259756006812!GO:0046822;regulation of nucleocytoplasmic transport;0.0114069439779297!GO:0000118;histone deacetylase complex;0.0115898618363012!GO:0009303;rRNA transcription;0.0116990483792406!GO:0003887;DNA-directed DNA polymerase activity;0.0120293873825005!GO:0019783;small conjugating protein-specific protease activity;0.0122338720912691!GO:0017166;vinculin binding;0.0122874449740979!GO:0030027;lamellipodium;0.0122874449740979!GO:0005885;Arp2/3 protein complex;0.0123086655652757!GO:0006378;mRNA polyadenylation;0.0123148829754005!GO:0009112;nucleobase metabolic process;0.0123148829754005!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0126147005359637!GO:0005869;dynactin complex;0.012727650070688!GO:0008287;protein serine/threonine phosphatase complex;0.0127284339782378!GO:0050178;phenylpyruvate tautomerase activity;0.0128398499439223!GO:0044450;microtubule organizing center part;0.0130121520821999!GO:0006730;one-carbon compound metabolic process;0.0130653725159899!GO:0030518;steroid hormone receptor signaling pathway;0.0132819173637584!GO:0009451;RNA modification;0.0135360781586173!GO:0046467;membrane lipid biosynthetic process;0.0135661044417319!GO:0046483;heterocycle metabolic process;0.0136297817162602!GO:0009081;branched chain family amino acid metabolic process;0.0136815595553989!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0136815595553989!GO:0006376;mRNA splice site selection;0.0138532795095672!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0138532795095672!GO:0048487;beta-tubulin binding;0.0139149154685774!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0139307798015952!GO:0009165;nucleotide biosynthetic process;0.0142249534156194!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0142368099708498!GO:0045047;protein targeting to ER;0.0142368099708498!GO:0006144;purine base metabolic process;0.0145033078355267!GO:0006278;RNA-dependent DNA replication;0.0146896688528365!GO:0005844;polysome;0.0152169139032436!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0152780644954317!GO:0030145;manganese ion binding;0.0162194174414209!GO:0006595;polyamine metabolic process;0.0166335562370242!GO:0042054;histone methyltransferase activity;0.0169448808057922!GO:0022411;cellular component disassembly;0.0172228044272818!GO:0004843;ubiquitin-specific protease activity;0.0178317414186192!GO:0043488;regulation of mRNA stability;0.0182537809807691!GO:0043487;regulation of RNA stability;0.0182537809807691!GO:0007090;regulation of S phase of mitotic cell cycle;0.0184133971035581!GO:0030137;COPI-coated vesicle;0.0184270753526373!GO:0044454;nuclear chromosome part;0.0187616558709478!GO:0030663;COPI coated vesicle membrane;0.0190290003344468!GO:0030126;COPI vesicle coat;0.0190290003344468!GO:0030132;clathrin coat of coated pit;0.0192399866668482!GO:0004523;ribonuclease H activity;0.019388401949343!GO:0008536;Ran GTPase binding;0.0197058719447123!GO:0051539;4 iron, 4 sulfur cluster binding;0.0199794916551323!GO:0000781;chromosome, telomeric region;0.0203622126531421!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0207632157612034!GO:0010257;NADH dehydrogenase complex assembly;0.0207632157612034!GO:0033108;mitochondrial respiratory chain complex assembly;0.0207632157612034!GO:0043433;negative regulation of transcription factor activity;0.0219566719405815!GO:0000819;sister chromatid segregation;0.0220559470193006!GO:0030133;transport vesicle;0.0227475797729464!GO:0016407;acetyltransferase activity;0.0228249436942105!GO:0008180;signalosome;0.0230169455294223!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0235698362520772!GO:0030134;ER to Golgi transport vesicle;0.0235833468538648!GO:0006505;GPI anchor metabolic process;0.0236051483716695!GO:0031371;ubiquitin conjugating enzyme complex;0.0236051483716695!GO:0006740;NADPH regeneration;0.0236167051370079!GO:0006098;pentose-phosphate shunt;0.0236167051370079!GO:0033261;regulation of progression through S phase;0.0236754582290701!GO:0031625;ubiquitin protein ligase binding;0.0236754582290701!GO:0006301;postreplication repair;0.0238580165187472!GO:0035258;steroid hormone receptor binding;0.0240839315654111!GO:0004221;ubiquitin thiolesterase activity;0.0246210500456441!GO:0031529;ruffle organization and biogenesis;0.0252037632784671!GO:0000070;mitotic sister chromatid segregation;0.025824900146326!GO:0001832;blastocyst growth;0.0259853786563548!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0260230327086127!GO:0016585;chromatin remodeling complex;0.0260230327086127!GO:0030522;intracellular receptor-mediated signaling pathway;0.0265855096035422!GO:0031123;RNA 3'-end processing;0.0272683086014265!GO:0051100;negative regulation of binding;0.0274964261270463!GO:0006506;GPI anchor biosynthetic process;0.0275008074944072!GO:0043392;negative regulation of DNA binding;0.028102834678547!GO:0005875;microtubule associated complex;0.0281520283143539!GO:0008213;protein amino acid alkylation;0.0284782552836495!GO:0006479;protein amino acid methylation;0.0284782552836495!GO:0030911;TPR domain binding;0.0284913262581222!GO:0016044;membrane organization and biogenesis;0.0284913262581222!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0285089979122603!GO:0030496;midbody;0.0285342767861169!GO:0030384;phosphoinositide metabolic process;0.028846537331685!GO:0007021;tubulin folding;0.0289531242459418!GO:0045815;positive regulation of gene expression, epigenetic;0.0290291536173311!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0290764648325606!GO:0006406;mRNA export from nucleus;0.0291775149036169!GO:0016581;NuRD complex;0.0291775149036169!GO:0051059;NF-kappaB binding;0.0298731034569564!GO:0008652;amino acid biosynthetic process;0.0300338784576378!GO:0033170;DNA-protein loading ATPase activity;0.0304076611751772!GO:0003689;DNA clamp loader activity;0.0304076611751772!GO:0043130;ubiquitin binding;0.0305975262538477!GO:0032182;small conjugating protein binding;0.0305975262538477!GO:0051656;establishment of organelle localization;0.0307892645450865!GO:0005720;nuclear heterochromatin;0.0310719494955853!GO:0051287;NAD binding;0.0313874528677933!GO:0008156;negative regulation of DNA replication;0.0317532807611127!GO:0006400;tRNA modification;0.0322147771938975!GO:0042393;histone binding;0.0329869467145883!GO:0031628;opioid receptor binding;0.0329869467145883!GO:0031852;mu-type opioid receptor binding;0.0329869467145883!GO:0005652;nuclear lamina;0.0329869467145883!GO:0006520;amino acid metabolic process;0.0332485915172886!GO:0000178;exosome (RNase complex);0.0334901688428517!GO:0051540;metal cluster binding;0.0334901688428517!GO:0051536;iron-sulfur cluster binding;0.0334901688428517!GO:0046112;nucleobase biosynthetic process;0.0336353330931909!GO:0016197;endosome transport;0.0339928927620421!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0342977400768049!GO:0030176;integral to endoplasmic reticulum membrane;0.0343392424624031!GO:0043087;regulation of GTPase activity;0.034621721648015!GO:0004722;protein serine/threonine phosphatase activity;0.03537816028436!GO:0000726;non-recombinational repair;0.0357883789850606!GO:0016790;thiolester hydrolase activity;0.0358644922126192!GO:0016279;protein-lysine N-methyltransferase activity;0.0365870215076269!GO:0018024;histone-lysine N-methyltransferase activity;0.0365870215076269!GO:0016278;lysine N-methyltransferase activity;0.0365870215076269!GO:0004239;methionyl aminopeptidase activity;0.0369847626632817!GO:0006650;glycerophospholipid metabolic process;0.0370789599989081!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0373057599157027!GO:0042791;5S class rRNA transcription;0.0380692340758104!GO:0000127;transcription factor TFIIIC complex;0.0380692340758104!GO:0042797;tRNA transcription from RNA polymerase III promoter;0.0380692340758104!GO:0030658;transport vesicle membrane;0.0383418735927724!GO:0006984;ER-nuclear signaling pathway;0.0383418735927724!GO:0009083;branched chain family amino acid catabolic process;0.0384076944881689!GO:0030521;androgen receptor signaling pathway;0.0385285959681657!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.03949219723766!GO:0045947;negative regulation of translational initiation;0.0396073540143634!GO:0000096;sulfur amino acid metabolic process;0.0403567892237176!GO:0005732;small nucleolar ribonucleoprotein complex;0.0406743642090012!GO:0042809;vitamin D receptor binding;0.0412133195560155!GO:0006220;pyrimidine nucleotide metabolic process;0.0415192625512141!GO:0031057;negative regulation of histone modification;0.0415399413322232!GO:0035067;negative regulation of histone acetylation;0.0415399413322232!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0415965870231838!GO:0000060;protein import into nucleus, translocation;0.0415965870231838!GO:0000152;nuclear ubiquitin ligase complex;0.0415965870231838!GO:0016569;covalent chromatin modification;0.0416561860465828!GO:0006354;RNA elongation;0.0420850486043271!GO:0003893;epsilon DNA polymerase activity;0.042233847667716!GO:0048468;cell development;0.0425910232136696!GO:0016491;oxidoreductase activity;0.0428969445023933!GO:0005784;translocon complex;0.0442854331177173!GO:0016579;protein deubiquitination;0.0444637011698936!GO:0017134;fibroblast growth factor binding;0.044524616970322!GO:0047485;protein N-terminus binding;0.044524616970322!GO:0030320;cellular monovalent inorganic anion homeostasis;0.044524616970322!GO:0055083;monovalent inorganic anion homeostasis;0.044524616970322!GO:0055064;chloride ion homeostasis;0.044524616970322!GO:0030644;cellular chloride ion homeostasis;0.044524616970322!GO:0042769;DNA damage response, detection of DNA damage;0.0464834350143131!GO:0006497;protein amino acid lipidation;0.0472008376095779!GO:0030118;clathrin coat;0.047908430414692!GO:0019104;DNA N-glycosylase activity;0.048204297767294!GO:0005680;anaphase-promoting complex;0.0483215558471945!GO:0006091;generation of precursor metabolites and energy;0.0483215558471945!GO:0032561;guanyl ribonucleotide binding;0.0489328413000821!GO:0019001;guanyl nucleotide binding;0.0489328413000821!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0496107305489855!GO:0045039;protein import into mitochondrial inner membrane;0.0496107305489855!GO:0042158;lipoprotein biosynthetic process;0.0497316924970899!GO:0006778;porphyrin metabolic process;0.0497612367269148!GO:0033013;tetrapyrrole metabolic process;0.0497612367269148!GO:0030660;Golgi-associated vesicle membrane;0.0497612367269148 | |||
|sample_id=10728 | |sample_id=10728 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=brain | |sample_tissue=brain | ||
|top_motifs=SOX5:1.87236040362;BREu{core}:1.80008428251;POU1F1:1.71349935469;TEF:1.54588394211;PAX3,7:1.48187871343;STAT5{A,B}:1.46288170225;E2F1..5:1.43397321542;NANOG:1.36451649789;FOXA2:1.25354196822;PAX6:1.22856131687;TFDP1:1.20848913502;NKX2-1,4:1.16586805306;HOX{A5,B5}:1.16504676059;VSX1,2:1.13564188528;ZNF143:1.0987682446;POU5F1:1.05958059383;NRF1:1.04739164563;FOXQ1:1.03287372698;EGR1..3:0.965607678292;AHR_ARNT_ARNT2:0.957255810103;RBPJ:0.952528921634;HOX{A4,D4}:0.909581232581;PRRX1,2:0.902099537152;ATF4:0.871805466993;PAX4:0.868144269908;ALX1:0.8376139374;bHLH_family:0.777949341409;NKX2-3_NKX2-5:0.770157336157;ZNF384:0.756439314917;OCT4_SOX2{dimer}:0.713833448945;LEF1_TCF7_TCF7L1,2:0.71158295289;POU3F1..4:0.707539121555;ADNP_IRX_SIX_ZHX:0.675458134886;HOXA9_MEIS1:0.629319687793;NFY{A,B,C}:0.623319118056;GTF2A1,2:0.619143915085;PBX1:0.591701089947;SOX{8,9,10}:0.58708599749;POU2F1..3:0.578738159013;ZNF423:0.570164590477;CUX2:0.55117816885;GTF2I:0.550868745283;PAX8:0.539827130796;PATZ1:0.50102439841;RFX1:0.494480771438;IKZF2:0.48402888499;CDC5L:0.470487348289;ONECUT1,2:0.469714572672;RORA:0.45475625895;FOX{I1,J2}:0.439434192451;TFAP2B:0.435613403824;HOX{A6,A7,B6,B7}:0.431645309692;ZBTB16:0.431019213186;CRX:0.422535033238;MTE{core}:0.397192866773;MYB:0.383790781052;POU6F1:0.376410497665;ZFP161:0.363842610881;TLX1..3_NFIC{dimer}:0.32833147964;GFI1:0.322030995737;LHX3,4:0.318104738152;CREB1:0.313158520702;DBP:0.312620506468;MZF1:0.294456344111;NFIL3:0.261504628238;GATA6:0.261106383568;PITX1..3:0.244135097417;NR6A1:0.205464500364;ATF5_CREB3:0.204253410248;MEF2{A,B,C,D}:0.201557760472;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.189263896069;TOPORS:0.184323335645;FOXL1:0.180745562231;STAT1,3:0.175059767752;ELK1,4_GABP{A,B1}:0.142401256675;EN1,2:0.109833396919;XBP1:0.0901945615123;NFE2L2:0.086187985743;REST:0.0804597270846;CDX1,2,4:0.0754090287668;NR5A1,2:0.0750934194663;RREB1:0.0662642447082;HNF1A:0.0642205101714;AR:0.0632033566919;FOXO1,3,4:0.0579910484078;JUN:0.0429331006558;AIRE:0.0325701380933;PAX1,9:0.00551475236558;NKX6-1,2:-0.0081872923746;NKX3-1:-0.008764454903;T:-0.014110233461;EVI1:-0.0251869555156;NR1H4:-0.0291512749868;FOXD3:-0.0442437988615;SOX17:-0.0673011962705;HIC1:-0.0753192677767;SOX2:-0.0858926486065;RFX2..5_RFXANK_RFXAP:-0.089715794317;MED-1{core}:-0.103609384724;HAND1,2:-0.104133591049;XCPE1{core}:-0.122305486312;FOXP1:-0.142037154932;RUNX1..3:-0.161041358183;ZNF238:-0.163158848675;SP1:-0.19012902238;KLF4:-0.208791138296;TEAD1:-0.237296437573;HES1:-0.239903484962;CEBPA,B_DDIT3:-0.24325561433;ATF6:-0.243257061118;MTF1:-0.255322403484;GFI1B:-0.261956171745;PRDM1:-0.262596813625;PAX2:-0.275322962337;HBP1_HMGB_SSRP1_UBTF:-0.286333838337;NFKB1_REL_RELA:-0.295846376207;NFE2:-0.29689975511;PAX5:-0.301219408313;FOSL2:-0.301665855583;TFAP2{A,C}:-0.303743280235;ZNF148:-0.317290946607;NKX3-2:-0.318418025326;DMAP1_NCOR{1,2}_SMARC:-0.319832510298;FOXP3:-0.320433656337;YY1:-0.330601940328;HNF4A_NR2F1,2:-0.336171922964;TAL1_TCF{3,4,12}:-0.343169053049;MYFfamily:-0.354469382791;FOXM1:-0.359059314421;SREBF1,2:-0.361322809265;PDX1:-0.368948331411;HLF:-0.375168434606;HSF1,2:-0.379208335108;FOX{D1,D2}:-0.424610706543;FOXN1:-0.428309282638;MYBL2:-0.429556437415;SPIB:-0.440803593771;NFIX:-0.444187480079;FOS_FOS{B,L1}_JUN{B,D}:-0.457295189733;SNAI1..3:-0.466512778741;ATF2:-0.468746723123;IKZF1:-0.47167604899;ZEB1:-0.476082696566;BPTF:-0.478640439229;EBF1:-0.494118994534;MAZ:-0.496000573448;HMGA1,2:-0.497717245329;GATA4:-0.499416706463;BACH2:-0.501254042228;GLI1..3:-0.51782107132;UFEwm:-0.522021047395;SPI1:-0.555671841041;FOX{F1,F2,J1}:-0.562477027314;ETS1,2:-0.569053163208;TBP:-0.602526298073;RXR{A,B,G}:-0.612074279353;NR3C1:-0.62789949462;LMO2:-0.633031526086;ESRRA:-0.659912815055;TFAP4:-0.67234733267;GCM1,2:-0.683276180915;ZIC1..3:-0.700084146453;TP53:-0.72826257168;ELF1,2,4:-0.743264926601;NANOG{mouse}:-0.764759985913;GZF1:-0.790240093345;ARID5B:-0.791341513109;IRF1,2:-0.807627149018;ZBTB6:-0.838744865868;STAT2,4,6:-0.838755592435;IRF7:-0.889823961644;PPARG:-0.889975667883;NHLH1,2:-0.913113795457;SMAD1..7,9:-0.941415929412;NKX2-2,8:-0.945424119424;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.954596456628;MYOD1:-0.982831353902;TBX4,5:-0.993602066521;SPZ1:-1.02316989888;NFATC1..3:-1.02975991321;ESR1:-1.04485475118;HMX1:-1.06095121025;MAFB:-1.13620237107;SRF:-1.15132396066;TGIF1:-1.20630186362;TLX2:-1.30325453298;EP300:-1.35992978988;HIF1A:-1.39689856486;RXRA_VDR{dimer}:-1.65219679577;NFE2L1:-1.73323822455;ALX4:-1.8987969982;TFCP2:-2.45401971843 | |top_motifs=SOX5:1.87236040362;BREu{core}:1.80008428251;POU1F1:1.71349935469;TEF:1.54588394211;PAX3,7:1.48187871343;STAT5{A,B}:1.46288170225;E2F1..5:1.43397321542;NANOG:1.36451649789;FOXA2:1.25354196822;PAX6:1.22856131687;TFDP1:1.20848913502;NKX2-1,4:1.16586805306;HOX{A5,B5}:1.16504676059;VSX1,2:1.13564188528;ZNF143:1.0987682446;POU5F1:1.05958059383;NRF1:1.04739164563;FOXQ1:1.03287372698;EGR1..3:0.965607678292;AHR_ARNT_ARNT2:0.957255810103;RBPJ:0.952528921634;HOX{A4,D4}:0.909581232581;PRRX1,2:0.902099537152;ATF4:0.871805466993;PAX4:0.868144269908;ALX1:0.8376139374;bHLH_family:0.777949341409;NKX2-3_NKX2-5:0.770157336157;ZNF384:0.756439314917;OCT4_SOX2{dimer}:0.713833448945;LEF1_TCF7_TCF7L1,2:0.71158295289;POU3F1..4:0.707539121555;ADNP_IRX_SIX_ZHX:0.675458134886;HOXA9_MEIS1:0.629319687793;NFY{A,B,C}:0.623319118056;GTF2A1,2:0.619143915085;PBX1:0.591701089947;SOX{8,9,10}:0.58708599749;POU2F1..3:0.578738159013;ZNF423:0.570164590477;CUX2:0.55117816885;GTF2I:0.550868745283;PAX8:0.539827130796;PATZ1:0.50102439841;RFX1:0.494480771438;IKZF2:0.48402888499;CDC5L:0.470487348289;ONECUT1,2:0.469714572672;RORA:0.45475625895;FOX{I1,J2}:0.439434192451;TFAP2B:0.435613403824;HOX{A6,A7,B6,B7}:0.431645309692;ZBTB16:0.431019213186;CRX:0.422535033238;MTE{core}:0.397192866773;MYB:0.383790781052;POU6F1:0.376410497665;ZFP161:0.363842610881;TLX1..3_NFIC{dimer}:0.32833147964;GFI1:0.322030995737;LHX3,4:0.318104738152;CREB1:0.313158520702;DBP:0.312620506468;MZF1:0.294456344111;NFIL3:0.261504628238;GATA6:0.261106383568;PITX1..3:0.244135097417;NR6A1:0.205464500364;ATF5_CREB3:0.204253410248;MEF2{A,B,C,D}:0.201557760472;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.189263896069;TOPORS:0.184323335645;FOXL1:0.180745562231;STAT1,3:0.175059767752;ELK1,4_GABP{A,B1}:0.142401256675;EN1,2:0.109833396919;XBP1:0.0901945615123;NFE2L2:0.086187985743;REST:0.0804597270846;CDX1,2,4:0.0754090287668;NR5A1,2:0.0750934194663;RREB1:0.0662642447082;HNF1A:0.0642205101714;AR:0.0632033566919;FOXO1,3,4:0.0579910484078;JUN:0.0429331006558;AIRE:0.0325701380933;PAX1,9:0.00551475236558;NKX6-1,2:-0.0081872923746;NKX3-1:-0.008764454903;T:-0.014110233461;EVI1:-0.0251869555156;NR1H4:-0.0291512749868;FOXD3:-0.0442437988615;SOX17:-0.0673011962705;HIC1:-0.0753192677767;SOX2:-0.0858926486065;RFX2..5_RFXANK_RFXAP:-0.089715794317;MED-1{core}:-0.103609384724;HAND1,2:-0.104133591049;XCPE1{core}:-0.122305486312;FOXP1:-0.142037154932;RUNX1..3:-0.161041358183;ZNF238:-0.163158848675;SP1:-0.19012902238;KLF4:-0.208791138296;TEAD1:-0.237296437573;HES1:-0.239903484962;CEBPA,B_DDIT3:-0.24325561433;ATF6:-0.243257061118;MTF1:-0.255322403484;GFI1B:-0.261956171745;PRDM1:-0.262596813625;PAX2:-0.275322962337;HBP1_HMGB_SSRP1_UBTF:-0.286333838337;NFKB1_REL_RELA:-0.295846376207;NFE2:-0.29689975511;PAX5:-0.301219408313;FOSL2:-0.301665855583;TFAP2{A,C}:-0.303743280235;ZNF148:-0.317290946607;NKX3-2:-0.318418025326;DMAP1_NCOR{1,2}_SMARC:-0.319832510298;FOXP3:-0.320433656337;YY1:-0.330601940328;HNF4A_NR2F1,2:-0.336171922964;TAL1_TCF{3,4,12}:-0.343169053049;MYFfamily:-0.354469382791;FOXM1:-0.359059314421;SREBF1,2:-0.361322809265;PDX1:-0.368948331411;HLF:-0.375168434606;HSF1,2:-0.379208335108;FOX{D1,D2}:-0.424610706543;FOXN1:-0.428309282638;MYBL2:-0.429556437415;SPIB:-0.440803593771;NFIX:-0.444187480079;FOS_FOS{B,L1}_JUN{B,D}:-0.457295189733;SNAI1..3:-0.466512778741;ATF2:-0.468746723123;IKZF1:-0.47167604899;ZEB1:-0.476082696566;BPTF:-0.478640439229;EBF1:-0.494118994534;MAZ:-0.496000573448;HMGA1,2:-0.497717245329;GATA4:-0.499416706463;BACH2:-0.501254042228;GLI1..3:-0.51782107132;UFEwm:-0.522021047395;SPI1:-0.555671841041;FOX{F1,F2,J1}:-0.562477027314;ETS1,2:-0.569053163208;TBP:-0.602526298073;RXR{A,B,G}:-0.612074279353;NR3C1:-0.62789949462;LMO2:-0.633031526086;ESRRA:-0.659912815055;TFAP4:-0.67234733267;GCM1,2:-0.683276180915;ZIC1..3:-0.700084146453;TP53:-0.72826257168;ELF1,2,4:-0.743264926601;NANOG{mouse}:-0.764759985913;GZF1:-0.790240093345;ARID5B:-0.791341513109;IRF1,2:-0.807627149018;ZBTB6:-0.838744865868;STAT2,4,6:-0.838755592435;IRF7:-0.889823961644;PPARG:-0.889975667883;NHLH1,2:-0.913113795457;SMAD1..7,9:-0.941415929412;NKX2-2,8:-0.945424119424;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.954596456628;MYOD1:-0.982831353902;TBX4,5:-0.993602066521;SPZ1:-1.02316989888;NFATC1..3:-1.02975991321;ESR1:-1.04485475118;HMX1:-1.06095121025;MAFB:-1.13620237107;SRF:-1.15132396066;TGIF1:-1.20630186362;TLX2:-1.30325453298;EP300:-1.35992978988;HIF1A:-1.39689856486;RXRA_VDR{dimer}:-1.65219679577;NFE2L1:-1.73323822455;ALX4:-1.8987969982;TFCP2:-2.45401971843 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10728-110A8;search_select_hide=table117:FF:10728-110A8 | |||
}} | }} | ||
Latest revision as of 15:02, 3 June 2020
| Name: | neuroepithelioma cell line:SK-N-MC |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11853 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11853
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11853
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.664 |
| 10 | 10 | 0.267 |
| 100 | 100 | 0.82 |
| 101 | 101 | 0.768 |
| 102 | 102 | 0.74 |
| 103 | 103 | 0.0746 |
| 104 | 104 | 0.874 |
| 105 | 105 | 0.688 |
| 106 | 106 | 8.98929e-4 |
| 107 | 107 | 0.0147 |
| 108 | 108 | 0.478 |
| 109 | 109 | 0.0822 |
| 11 | 11 | 0.215 |
| 110 | 110 | 0.778 |
| 111 | 111 | 0.302 |
| 112 | 112 | 0.00518 |
| 113 | 113 | 0.445 |
| 114 | 114 | 0.00562 |
| 115 | 115 | 0.0897 |
| 116 | 116 | 0.34 |
| 117 | 117 | 0.614 |
| 118 | 118 | 0.283 |
| 119 | 119 | 0.146 |
| 12 | 12 | 0.526 |
| 120 | 120 | 0.744 |
| 121 | 121 | 0.295 |
| 122 | 122 | 0.386 |
| 123 | 123 | 0.416 |
| 124 | 124 | 0.589 |
| 125 | 125 | 0.588 |
| 126 | 126 | 0.443 |
| 127 | 127 | 0.503 |
| 128 | 128 | 0.129 |
| 129 | 129 | 0.705 |
| 13 | 13 | 0.781 |
| 130 | 130 | 0.019 |
| 131 | 131 | 0.28 |
| 132 | 132 | 0.488 |
| 133 | 133 | 0.285 |
| 134 | 134 | 0.451 |
| 135 | 135 | 0.0895 |
| 136 | 136 | 0.502 |
| 137 | 137 | 0.191 |
| 138 | 138 | 0.634 |
| 139 | 139 | 0.452 |
| 14 | 14 | 0.27 |
| 140 | 140 | 0.0312 |
| 141 | 141 | 0.164 |
| 142 | 142 | 0.995 |
| 143 | 143 | 0.335 |
| 144 | 144 | 0.389 |
| 145 | 145 | 0.0963 |
| 146 | 146 | 0.919 |
| 147 | 147 | 0.955 |
| 148 | 148 | 0.0678 |
| 149 | 149 | 0.0483 |
| 15 | 15 | 0.824 |
| 150 | 150 | 0.286 |
| 151 | 151 | 0.169 |
| 152 | 152 | 0.0163 |
| 153 | 153 | 0.923 |
| 154 | 154 | 0.891 |
| 155 | 155 | 0.222 |
| 156 | 156 | 0.892 |
| 157 | 157 | 0.259 |
| 158 | 158 | 0.374 |
| 159 | 159 | 0.282 |
| 16 | 16 | 0.15 |
| 160 | 160 | 0.441 |
| 161 | 161 | 0.745 |
| 162 | 162 | 0.472 |
| 163 | 163 | 0.924 |
| 164 | 164 | 0.28 |
| 165 | 165 | 0.918 |
| 166 | 166 | 0.313 |
| 167 | 167 | 0.735 |
| 168 | 168 | 0.328 |
| 169 | 169 | 0.0071 |
| 17 | 17 | 0.523 |
| 18 | 18 | 0.664 |
| 19 | 19 | 0.0121 |
| 2 | 2 | 0.123 |
| 20 | 20 | 0.811 |
| 21 | 21 | 0.0911 |
| 22 | 22 | 0.238 |
| 23 | 23 | 0.144 |
| 24 | 24 | 0.853 |
| 25 | 25 | 0.407 |
| 26 | 26 | 0.203 |
| 27 | 27 | 0.326 |
| 28 | 28 | 0.713 |
| 29 | 29 | 0.444 |
| 3 | 3 | 0.277 |
| 30 | 30 | 0.671 |
| 31 | 31 | 0.308 |
| 32 | 32 | 8.29642e-5 |
| 33 | 33 | 0.642 |
| 34 | 34 | 0.818 |
| 35 | 35 | 0.749 |
| 36 | 36 | 0.464 |
| 37 | 37 | 0.0313 |
| 38 | 38 | 0.472 |
| 39 | 39 | 0.237 |
| 4 | 4 | 0.2 |
| 40 | 40 | 0.439 |
| 41 | 41 | 0.353 |
| 42 | 42 | 0.468 |
| 43 | 43 | 0.32 |
| 44 | 44 | 0.133 |
| 45 | 45 | 0.428 |
| 46 | 46 | 0.173 |
| 47 | 47 | 0.457 |
| 48 | 48 | 0.454 |
| 49 | 49 | 0.716 |
| 5 | 5 | 0.309 |
| 50 | 50 | 0.265 |
| 51 | 51 | 0.577 |
| 52 | 52 | 0.144 |
| 53 | 53 | 0.55 |
| 54 | 54 | 0.506 |
| 55 | 55 | 0.484 |
| 56 | 56 | 0.623 |
| 57 | 57 | 0.411 |
| 58 | 58 | 0.481 |
| 59 | 59 | 0.0546 |
| 6 | 6 | 0.7 |
| 60 | 60 | 0.0644 |
| 61 | 61 | 0.468 |
| 62 | 62 | 0.321 |
| 63 | 63 | 0.352 |
| 64 | 64 | 0.978 |
| 65 | 65 | 0.356 |
| 66 | 66 | 0.222 |
| 67 | 67 | 0.283 |
| 68 | 68 | 0.62 |
| 69 | 69 | 0.522 |
| 7 | 7 | 0.979 |
| 70 | 70 | 0.00694 |
| 71 | 71 | 0.0492 |
| 72 | 72 | 0.521 |
| 73 | 73 | 0.00657 |
| 74 | 74 | 0.962 |
| 75 | 75 | 0.241 |
| 76 | 76 | 0.963 |
| 77 | 77 | 0.0282 |
| 78 | 78 | 0.456 |
| 79 | 79 | 0.022 |
| 8 | 8 | 0.707 |
| 80 | 80 | 0.5 |
| 81 | 81 | 0.653 |
| 82 | 82 | 0.159 |
| 83 | 83 | 0.167 |
| 84 | 84 | 0.501 |
| 85 | 85 | 1.7935e-4 |
| 86 | 86 | 0.4 |
| 87 | 87 | 0.168 |
| 88 | 88 | 0.622 |
| 89 | 89 | 0.105 |
| 9 | 9 | 0.381 |
| 90 | 90 | 0.952 |
| 91 | 91 | 0.171 |
| 92 | 92 | 0.137 |
| 93 | 93 | 0.871 |
| 94 | 94 | 0.455 |
| 95 | 95 | 0.156 |
| 96 | 96 | 0.771 |
| 97 | 97 | 0.336 |
| 98 | 98 | 0.765 |
| 99 | 99 | 0.513 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11853
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:962 neurofibroma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102914 SK-N-MC cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000333 (migratory neural crest cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000219 (motile cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
3093 (nervous system cancer)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
1192 (peripheral nervous system neoplasm)
2994 (germ cell cancer)
1115 (sarcoma)
169 (neuroendocrine tumor)
3193 (peripheral nerve sheath neoplasm)
962 (neurofibroma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000013 (sympathetic nervous system)
0003714 (neural tissue)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0002410 (autonomic nervous system)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0001016 (nervous system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100400 (sarcoma cell line sample)
0100932 (neuroblastoma cell line sample)
0102912 (neuroepithelioma cell line sample)
0104785 (Ewing's sarcoma family tumor cell line sample)
0102914 (SK-N-MC cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
