FF:10019-101D1: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005303 | ||
|HumanCAGEScanFiles=NCig10020;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/lung%252c%2520adult%252c%2520pool1.NCig10020.10019-101D1.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008678;DRR009550;DRZ000975;DRZ002360;DRZ012325;DRZ013710 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002048,UBERON:0002100,UBERON:0000479,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000117,UBERON:0000171,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010019 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 43: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/lung%252c%2520adult%252c%2520pool1.CNhs10625.10019-101D1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10019-101D1 | |id=FF:10019-101D1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010019 | ||
|is_obsolete= | |||
|library_id=CNhs10625 | |||
|library_id_phase_based=2:CNhs10625 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10019 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10019 | |||
|name=lung, adult, pool1 | |name=lung, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 62: | ||
|profile_cagescan=NCig10020,,, | |profile_cagescan=NCig10020,,, | ||
|profile_hcage=CNhs10625,LSID657,release008,COMPLETED | |profile_hcage=CNhs10625,LSID657,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:AM6000 Lot:0910061 -10 | |rna_catalog_number=Cat:AM6000 Lot:0910061 -10 | ||
| Line 57: | Line 80: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 93: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.55042983295651e-287!GO:0005737;cytoplasm;8.28901305597408e-160!GO:0005515;protein binding;3.69232281115395e-109!GO:0044444;cytoplasmic part;3.13501425025321e-96!GO:0043226;organelle;3.36221521631332e-90!GO:0043229;intracellular organelle;8.12004563838616e-90!GO:0043227;membrane-bound organelle;1.30961931084157e-86!GO:0043231;intracellular membrane-bound organelle;1.85975774759921e-86!GO:0044422;organelle part;4.45265110907432e-61!GO:0044446;intracellular organelle part;1.04163299005936e-59!GO:0032991;macromolecular complex;5.08400506289733e-49!GO:0016043;cellular component organization and biogenesis;1.94816097781603e-42!GO:0019538;protein metabolic process;7.58804008963578e-41!GO:0030529;ribonucleoprotein complex;1.34040100281366e-36!GO:0033036;macromolecule localization;2.56815721367809e-36!GO:0044238;primary metabolic process;3.82197604505937e-36!GO:0044237;cellular metabolic process;2.38036661187831e-35!GO:0044260;cellular macromolecule metabolic process;3.88927622628817e-35!GO:0015031;protein transport;3.88927622628817e-35!GO:0045184;establishment of protein localization;1.42048038269178e-34!GO:0008104;protein localization;1.42048038269178e-34!GO:0044267;cellular protein metabolic process;2.16822672008669e-34!GO:0003723;RNA binding;8.61371765469103e-34!GO:0031090;organelle membrane;1.17945905755346e-33!GO:0043170;macromolecule metabolic process;4.9322579331196e-33!GO:0005829;cytosol;1.12020936273361e-29!GO:0043233;organelle lumen;2.53508006578124e-29!GO:0031974;membrane-enclosed lumen;2.53508006578124e-29!GO:0044428;nuclear part;4.63962703299137e-28!GO:0043234;protein complex;3.61060718976416e-27!GO:0006412;translation;1.84054061949063e-26!GO:0046907;intracellular transport;3.11175238914069e-25!GO:0006886;intracellular protein transport;7.9696200265861e-24!GO:0005739;mitochondrion;1.25998668894056e-23!GO:0065003;macromolecular complex assembly;1.86544718941339e-23!GO:0005840;ribosome;3.74520804156413e-23!GO:0005634;nucleus;3.23143285570072e-21!GO:0022607;cellular component assembly;7.31162324032996e-21!GO:0003735;structural constituent of ribosome;1.71225898165276e-20!GO:0009059;macromolecule biosynthetic process;1.97078668596508e-20!GO:0012501;programmed cell death;3.7923484280393e-20!GO:0006915;apoptosis;4.66814623404299e-20!GO:0031967;organelle envelope;4.95946643189352e-20!GO:0016071;mRNA metabolic process;7.08607836441885e-20!GO:0031975;envelope;7.08607836441885e-20!GO:0008134;transcription factor binding;1.03092099701223e-19!GO:0048770;pigment granule;1.47334059570448e-19!GO:0042470;melanosome;1.47334059570448e-19!GO:0009058;biosynthetic process;1.93597503883203e-19!GO:0008219;cell death;4.12759358731569e-19!GO:0016265;death;4.12759358731569e-19!GO:0016192;vesicle-mediated transport;5.3655070771524e-19!GO:0048523;negative regulation of cellular process;6.22778503172053e-19!GO:0033279;ribosomal subunit;6.43787732497623e-19!GO:0008380;RNA splicing;4.12177535060154e-18!GO:0051641;cellular localization;4.48853778467538e-18!GO:0051649;establishment of cellular localization;5.13906406829123e-18!GO:0031981;nuclear lumen;8.63512757726541e-18!GO:0044429;mitochondrial part;1.04737370484934e-17!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.21870092475723e-17!GO:0005783;endoplasmic reticulum;1.86922386928218e-17!GO:0005794;Golgi apparatus;2.89606464800574e-17!GO:0048519;negative regulation of biological process;2.89606464800574e-17!GO:0044249;cellular biosynthetic process;3.38210368459316e-17!GO:0012505;endomembrane system;1.93099768134302e-16!GO:0006397;mRNA processing;4.94752294624881e-16!GO:0006396;RNA processing;2.23684138716368e-15!GO:0044445;cytosolic part;2.56515302632151e-15!GO:0006996;organelle organization and biogenesis;1.48771294722196e-14!GO:0005773;vacuole;1.75521619832192e-14!GO:0006119;oxidative phosphorylation;6.0788927731068e-14!GO:0000323;lytic vacuole;1.36784422825126e-13!GO:0005764;lysosome;1.36784422825126e-13!GO:0000166;nucleotide binding;3.4125070280903e-13!GO:0005740;mitochondrial envelope;3.8591171064525e-13!GO:0030036;actin cytoskeleton organization and biogenesis;5.09401881746114e-13!GO:0005681;spliceosome;6.97472268151671e-13!GO:0031966;mitochondrial membrane;6.97472268151671e-13!GO:0042981;regulation of apoptosis;2.21545319534913e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.44865215238508e-12!GO:0003712;transcription cofactor activity;2.53760754370787e-12!GO:0043228;non-membrane-bound organelle;2.62411872572615e-12!GO:0043232;intracellular non-membrane-bound organelle;2.62411872572615e-12!GO:0043283;biopolymer metabolic process;3.21503798097698e-12!GO:0005654;nucleoplasm;3.2990896918652e-12!GO:0043285;biopolymer catabolic process;3.97182246835067e-12!GO:0043067;regulation of programmed cell death;4.13515425595036e-12!GO:0006950;response to stress;4.48717504050298e-12!GO:0044265;cellular macromolecule catabolic process;4.5690290306743e-12!GO:0019941;modification-dependent protein catabolic process;4.5690290306743e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.5690290306743e-12!GO:0006511;ubiquitin-dependent protein catabolic process;5.40550649899535e-12!GO:0044257;cellular protein catabolic process;6.49459821836935e-12!GO:0019866;organelle inner membrane;6.49459821836935e-12!GO:0006793;phosphorus metabolic process;9.26224448109267e-12!GO:0006796;phosphate metabolic process;9.26224448109267e-12!GO:0006605;protein targeting;1.29158467830014e-11!GO:0044432;endoplasmic reticulum part;1.66391674551052e-11!GO:0048518;positive regulation of biological process;1.80732855337101e-11!GO:0022618;protein-RNA complex assembly;1.88908723310828e-11!GO:0031982;vesicle;2.12818373022804e-11!GO:0048522;positive regulation of cellular process;3.32103725908938e-11!GO:0043412;biopolymer modification;3.49858656276039e-11!GO:0015935;small ribosomal subunit;4.09683267621151e-11!GO:0006464;protein modification process;4.22770324288093e-11!GO:0030029;actin filament-based process;4.25048477791237e-11!GO:0030163;protein catabolic process;4.94094429201789e-11!GO:0006461;protein complex assembly;6.18525470999245e-11!GO:0005743;mitochondrial inner membrane;6.19402681339079e-11!GO:0006457;protein folding;6.20281382007346e-11!GO:0031410;cytoplasmic vesicle;9.04486602124335e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.06382669007006e-10!GO:0044451;nucleoplasm part;1.1467794510608e-10!GO:0007243;protein kinase cascade;1.24195779647332e-10!GO:0048193;Golgi vesicle transport;1.41749254717835e-10!GO:0031988;membrane-bound vesicle;2.00336146201255e-10!GO:0050794;regulation of cellular process;2.1981236161011e-10!GO:0043687;post-translational protein modification;2.31067414286213e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31369699795863e-10!GO:0005768;endosome;2.31507504723153e-10!GO:0016564;transcription repressor activity;2.36728433336729e-10!GO:0010467;gene expression;3.64371935785409e-10!GO:0017076;purine nucleotide binding;3.69987881950988e-10!GO:0008092;cytoskeletal protein binding;3.77012976482556e-10!GO:0006366;transcription from RNA polymerase II promoter;5.30794045553622e-10!GO:0009057;macromolecule catabolic process;5.51285517207166e-10!GO:0005746;mitochondrial respiratory chain;5.76953063716315e-10!GO:0007242;intracellular signaling cascade;5.98115471732092e-10!GO:0016023;cytoplasmic membrane-bound vesicle;5.98115471732092e-10!GO:0016310;phosphorylation;5.98115471732092e-10!GO:0006913;nucleocytoplasmic transport;6.35402696147086e-10!GO:0032553;ribonucleotide binding;6.44789787835022e-10!GO:0032555;purine ribonucleotide binding;6.44789787835022e-10!GO:0050789;regulation of biological process;7.77378269159337e-10!GO:0044248;cellular catabolic process;7.79193855507463e-10!GO:0000502;proteasome complex (sensu Eukaryota);8.9505458205443e-10!GO:0019899;enzyme binding;9.19199025998121e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.16085525496185e-09!GO:0051246;regulation of protein metabolic process;1.19060517127958e-09!GO:0016462;pyrophosphatase activity;1.47194409297709e-09!GO:0051169;nuclear transport;1.57533878934933e-09!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.6485014366604e-09!GO:0017111;nucleoside-triphosphatase activity;1.84592298771167e-09!GO:0016817;hydrolase activity, acting on acid anhydrides;2.38685016212778e-09!GO:0044455;mitochondrial membrane part;3.44568859666567e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.5369799033956e-09!GO:0005793;ER-Golgi intermediate compartment;3.76361089581674e-09!GO:0016874;ligase activity;4.57280205630661e-09!GO:0007264;small GTPase mediated signal transduction;5.20337605295422e-09!GO:0008135;translation factor activity, nucleic acid binding;5.78091788623489e-09!GO:0016044;membrane organization and biogenesis;6.23597766380787e-09!GO:0050136;NADH dehydrogenase (quinone) activity;6.62961918752132e-09!GO:0003954;NADH dehydrogenase activity;6.62961918752132e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.62961918752132e-09!GO:0043069;negative regulation of programmed cell death;7.25901962544272e-09!GO:0008565;protein transporter activity;7.71737228796752e-09!GO:0015934;large ribosomal subunit;8.49147139423572e-09!GO:0031252;leading edge;1.05103576283288e-08!GO:0043066;negative regulation of apoptosis;1.05510512828154e-08!GO:0006512;ubiquitin cycle;1.52610739759681e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.85262590225989e-08!GO:0031324;negative regulation of cellular metabolic process;2.07763643443593e-08!GO:0065007;biological regulation;2.22873387921491e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.23042406573685e-08!GO:0006916;anti-apoptosis;2.71449243111842e-08!GO:0005789;endoplasmic reticulum membrane;2.77173479725088e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.96368735749261e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.96368735749261e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.97837386060515e-08!GO:0051082;unfolded protein binding;3.77311483430255e-08!GO:0006446;regulation of translational initiation;4.15345314393112e-08!GO:0016604;nuclear body;4.57080648119245e-08!GO:0003714;transcription corepressor activity;5.06805797229287e-08!GO:0009892;negative regulation of metabolic process;5.91182122647836e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.95783762716788e-08!GO:0003743;translation initiation factor activity;7.44830231233596e-08!GO:0008639;small protein conjugating enzyme activity;7.72424010896381e-08!GO:0005635;nuclear envelope;9.64314676462889e-08!GO:0003779;actin binding;1.06067740373556e-07!GO:0004842;ubiquitin-protein ligase activity;1.24063315283936e-07!GO:0008361;regulation of cell size;1.74586909202147e-07!GO:0006413;translational initiation;2.164283984777e-07!GO:0016049;cell growth;2.83996233248759e-07!GO:0006897;endocytosis;3.10861271228333e-07!GO:0010324;membrane invagination;3.10861271228333e-07!GO:0051186;cofactor metabolic process;3.41324584314797e-07!GO:0030964;NADH dehydrogenase complex (quinone);3.46256023317564e-07!GO:0045271;respiratory chain complex I;3.46256023317564e-07!GO:0005747;mitochondrial respiratory chain complex I;3.46256023317564e-07!GO:0017038;protein import;3.60513127118495e-07!GO:0042775;organelle ATP synthesis coupled electron transport;3.73938171969537e-07!GO:0042773;ATP synthesis coupled electron transport;3.73938171969537e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.81070354574473e-07!GO:0016607;nuclear speck;3.94692628590956e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.35313256991918e-07!GO:0019787;small conjugating protein ligase activity;5.46806342389764e-07!GO:0031980;mitochondrial lumen;6.31184606606376e-07!GO:0005759;mitochondrial matrix;6.31184606606376e-07!GO:0009056;catabolic process;6.5102281877616e-07!GO:0019829;cation-transporting ATPase activity;6.5102281877616e-07!GO:0016481;negative regulation of transcription;6.86416172575201e-07!GO:0003924;GTPase activity;7.64461456505812e-07!GO:0005525;GTP binding;8.04494620443143e-07!GO:0051170;nuclear import;8.71934466538459e-07!GO:0009966;regulation of signal transduction;9.34346054876928e-07!GO:0006606;protein import into nucleus;9.63875022730829e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.12623359426242e-06!GO:0000375;RNA splicing, via transesterification reactions;1.12623359426242e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.12623359426242e-06!GO:0001558;regulation of cell growth;1.85723422955414e-06!GO:0044431;Golgi apparatus part;2.16844748570216e-06!GO:0009055;electron carrier activity;2.18463517709138e-06!GO:0030554;adenyl nucleotide binding;2.18463517709138e-06!GO:0045786;negative regulation of progression through cell cycle;2.38668120834751e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.41786854231983e-06!GO:0031965;nuclear membrane;2.41790803957962e-06!GO:0005770;late endosome;2.47479192665394e-06!GO:0015986;ATP synthesis coupled proton transport;2.65063229736504e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.65063229736504e-06!GO:0048468;cell development;3.1156448966552e-06!GO:0032559;adenyl ribonucleotide binding;3.1890032512018e-06!GO:0005524;ATP binding;3.76015596085284e-06!GO:0030695;GTPase regulator activity;4.14688855027232e-06!GO:0003713;transcription coactivator activity;4.423347268807e-06!GO:0008283;cell proliferation;4.74705652173017e-06!GO:0007010;cytoskeleton organization and biogenesis;4.91545212976541e-06!GO:0065009;regulation of a molecular function;5.47893155068275e-06!GO:0051674;localization of cell;5.65688988235404e-06!GO:0006928;cell motility;5.65688988235404e-06!GO:0032561;guanyl ribonucleotide binding;7.27528216067664e-06!GO:0019001;guanyl nucleotide binding;7.27528216067664e-06!GO:0006732;coenzyme metabolic process;9.92485012548948e-06!GO:0042802;identical protein binding;1.06840936257752e-05!GO:0030120;vesicle coat;1.10334101516827e-05!GO:0030662;coated vesicle membrane;1.10334101516827e-05!GO:0048475;coated membrane;1.17368983404903e-05!GO:0030117;membrane coat;1.17368983404903e-05!GO:0008047;enzyme activator activity;1.29412035169856e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.29412035169856e-05!GO:0016881;acid-amino acid ligase activity;1.29412035169856e-05!GO:0005730;nucleolus;1.36669301767566e-05!GO:0016563;transcription activator activity;1.40646805064046e-05!GO:0045333;cellular respiration;1.49744039087287e-05!GO:0009060;aerobic respiration;2.02768825813616e-05!GO:0051789;response to protein stimulus;2.29065531522e-05!GO:0006986;response to unfolded protein;2.29065531522e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.45656696910782e-05!GO:0043065;positive regulation of apoptosis;2.49983370522918e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.51835727464559e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.04258035570926e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.04258035570926e-05!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.52087451353357e-05!GO:0009142;nucleoside triphosphate biosynthetic process;3.90674449239334e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.90674449239334e-05!GO:0009967;positive regulation of signal transduction;3.99257823067096e-05!GO:0043068;positive regulation of programmed cell death;4.21679169119807e-05!GO:0005096;GTPase activator activity;4.68497010170595e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.9142713285285e-05!GO:0009144;purine nucleoside triphosphate metabolic process;4.9142713285285e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.95631189823809e-05!GO:0045892;negative regulation of transcription, DNA-dependent;5.43739583813816e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.43779085702117e-05!GO:0040008;regulation of growth;5.53603984318223e-05!GO:0044440;endosomal part;5.85900468008927e-05!GO:0010008;endosome membrane;5.85900468008927e-05!GO:0051726;regulation of cell cycle;5.85900468008927e-05!GO:0009199;ribonucleoside triphosphate metabolic process;6.01610789531113e-05!GO:0009611;response to wounding;6.11930244458785e-05!GO:0000139;Golgi membrane;6.18808193676291e-05!GO:0006613;cotranslational protein targeting to membrane;6.38808404640078e-05!GO:0000074;regulation of progression through cell cycle;6.44525548144054e-05!GO:0006259;DNA metabolic process;6.9392039501761e-05!GO:0015078;hydrogen ion transmembrane transporter activity;7.35000756159076e-05!GO:0006754;ATP biosynthetic process;7.55565762544896e-05!GO:0006753;nucleoside phosphate metabolic process;7.55565762544896e-05!GO:0009150;purine ribonucleotide metabolic process;7.93278582115467e-05!GO:0009141;nucleoside triphosphate metabolic process;8.28670675930187e-05!GO:0007049;cell cycle;9.11210185841569e-05!GO:0005083;small GTPase regulator activity;9.77553883585917e-05!GO:0002376;immune system process;9.88300200887775e-05!GO:0044453;nuclear membrane part;0.00010045532439998!GO:0001726;ruffle;0.000101987833503412!GO:0033673;negative regulation of kinase activity;0.00010665594161584!GO:0006469;negative regulation of protein kinase activity;0.00010665594161584!GO:0005791;rough endoplasmic reticulum;0.000108838177528958!GO:0005761;mitochondrial ribosome;0.00010964436185434!GO:0000313;organellar ribosome;0.00010964436185434!GO:0006099;tricarboxylic acid cycle;0.000110530393342162!GO:0046356;acetyl-CoA catabolic process;0.000110530393342162!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000114095068350902!GO:0007265;Ras protein signal transduction;0.000115507604388216!GO:0030027;lamellipodium;0.00011658516757696!GO:0032446;protein modification by small protein conjugation;0.000128125505283066!GO:0005788;endoplasmic reticulum lumen;0.000128975759498498!GO:0001944;vasculature development;0.000133155448257319!GO:0006163;purine nucleotide metabolic process;0.000140556859238994!GO:0009259;ribonucleotide metabolic process;0.000142444306128714!GO:0009152;purine ribonucleotide biosynthetic process;0.000149054233908168!GO:0001568;blood vessel development;0.000149054233908168!GO:0030133;transport vesicle;0.000149054233908168!GO:0046034;ATP metabolic process;0.000150448181344799!GO:0016567;protein ubiquitination;0.000152814251744792!GO:0007167;enzyme linked receptor protein signaling pathway;0.000163020226568791!GO:0005798;Golgi-associated vesicle;0.000173252784109174!GO:0030100;regulation of endocytosis;0.000222963538393181!GO:0050790;regulation of catalytic activity;0.000249578787795297!GO:0016197;endosome transport;0.000257498335312993!GO:0006164;purine nucleotide biosynthetic process;0.000281808175166621!GO:0001666;response to hypoxia;0.000282907053939755!GO:0051348;negative regulation of transferase activity;0.000287911575810196!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000304986512616845!GO:0050900;leukocyte migration;0.000329555342330251!GO:0004298;threonine endopeptidase activity;0.000330879602918692!GO:0048471;perinuclear region of cytoplasm;0.000370250221567843!GO:0045259;proton-transporting ATP synthase complex;0.000374690841547021!GO:0051187;cofactor catabolic process;0.000393030457615336!GO:0009260;ribonucleotide biosynthetic process;0.000401761387899542!GO:0016887;ATPase activity;0.000426248906370055!GO:0004860;protein kinase inhibitor activity;0.000538105874298577!GO:0019838;growth factor binding;0.000566836796089826!GO:0000245;spliceosome assembly;0.000566836796089826!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000566836796089826!GO:0045926;negative regulation of growth;0.000592175425840029!GO:0008286;insulin receptor signaling pathway;0.000601342261159917!GO:0045893;positive regulation of transcription, DNA-dependent;0.000605454310429829!GO:0006417;regulation of translation;0.000642670135092246!GO:0030041;actin filament polymerization;0.00064382790316285!GO:0006084;acetyl-CoA metabolic process;0.000647808561738188!GO:0005769;early endosome;0.000688747829748839!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.000703515575125485!GO:0005774;vacuolar membrane;0.000714297376201865!GO:0019904;protein domain specific binding;0.00072693306674444!GO:0045792;negative regulation of cell size;0.000744760179109484!GO:0006323;DNA packaging;0.000744760179109484!GO:0051427;hormone receptor binding;0.000749976535544445!GO:0006917;induction of apoptosis;0.000759581561308817!GO:0008154;actin polymerization and/or depolymerization;0.000777487676108798!GO:0009109;coenzyme catabolic process;0.000789313361722737!GO:0030308;negative regulation of cell growth;0.000792500515972429!GO:0005885;Arp2/3 protein complex;0.000818481686899355!GO:0051128;regulation of cellular component organization and biogenesis;0.000883113661504173!GO:0051270;regulation of cell motility;0.000952739079031225!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000964677389157912!GO:0045941;positive regulation of transcription;0.000968008761269231!GO:0060090;molecular adaptor activity;0.000985178044566119!GO:0005643;nuclear pore;0.0010599397199622!GO:0030867;rough endoplasmic reticulum membrane;0.00110348420779671!GO:0009615;response to virus;0.00112977537666607!GO:0012502;induction of programmed cell death;0.00121046789464033!GO:0008654;phospholipid biosynthetic process;0.00121257838022018!GO:0006643;membrane lipid metabolic process;0.00124933512111766!GO:0035257;nuclear hormone receptor binding;0.00129815994748251!GO:0005100;Rho GTPase activator activity;0.00130520572269879!GO:0001525;angiogenesis;0.00136460795965019!GO:0006954;inflammatory response;0.00137220806671081!GO:0051338;regulation of transferase activity;0.00142176156994497!GO:0043566;structure-specific DNA binding;0.00142870535499118!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00146034272090506!GO:0006752;group transfer coenzyme metabolic process;0.00151027228141603!GO:0048514;blood vessel morphogenesis;0.00152518660980576!GO:0006612;protein targeting to membrane;0.00152930993604411!GO:0042623;ATPase activity, coupled;0.0015712264227506!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00160970008387037!GO:0033116;ER-Golgi intermediate compartment membrane;0.00163456078024827!GO:0005741;mitochondrial outer membrane;0.00169462106693431!GO:0006333;chromatin assembly or disassembly;0.0017155833307845!GO:0016301;kinase activity;0.00171980821571471!GO:0019210;kinase inhibitor activity;0.00187215563179512!GO:0016491;oxidoreductase activity;0.00187215563179512!GO:0000151;ubiquitin ligase complex;0.00188457221238523!GO:0030532;small nuclear ribonucleoprotein complex;0.00188457221238523!GO:0019843;rRNA binding;0.00202597631220054!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00204261647965859!GO:0043549;regulation of kinase activity;0.00209113016354885!GO:0009893;positive regulation of metabolic process;0.00211114577965041!GO:0046983;protein dimerization activity;0.00212797930497826!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0022424615192648!GO:0050657;nucleic acid transport;0.0022424615192648!GO:0051236;establishment of RNA localization;0.0022424615192648!GO:0050658;RNA transport;0.0022424615192648!GO:0030155;regulation of cell adhesion;0.00229956745408293!GO:0000902;cell morphogenesis;0.00232116335463014!GO:0032989;cellular structure morphogenesis;0.00232116335463014!GO:0005765;lysosomal membrane;0.00234567758552135!GO:0042127;regulation of cell proliferation;0.00237996633444875!GO:0006403;RNA localization;0.00245129960680121!GO:0005905;coated pit;0.00248124742036572!GO:0040011;locomotion;0.00249779670822832!GO:0031968;organelle outer membrane;0.00251827896299!GO:0051188;cofactor biosynthetic process;0.00251827896299!GO:0051049;regulation of transport;0.00253397737692888!GO:0003697;single-stranded DNA binding;0.00278965508649503!GO:0008250;oligosaccharyl transferase complex;0.00283527024342057!GO:0043623;cellular protein complex assembly;0.00293804381156433!GO:0040012;regulation of locomotion;0.00293804381156433!GO:0045121;lipid raft;0.00296253048906568!GO:0006468;protein amino acid phosphorylation;0.00296658791535433!GO:0006693;prostaglandin metabolic process;0.00296658791535433!GO:0006692;prostanoid metabolic process;0.00296658791535433!GO:0046930;pore complex;0.0030327977888796!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00307283893955571!GO:0019867;outer membrane;0.00323463009243032!GO:0006607;NLS-bearing substrate import into nucleus;0.00329102977012794!GO:0044437;vacuolar part;0.00332847710069551!GO:0003724;RNA helicase activity;0.00343222733096033!GO:0032940;secretion by cell;0.00349106364451007!GO:0051336;regulation of hydrolase activity;0.00353736757323612!GO:0045859;regulation of protein kinase activity;0.00358380387777031!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00363168825036393!GO:0009607;response to biotic stimulus;0.00368371724240529!GO:0051920;peroxiredoxin activity;0.00372037203908768!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00382753684945352!GO:0030118;clathrin coat;0.00404377140993618!GO:0015980;energy derivation by oxidation of organic compounds;0.00411038501645706!GO:0008026;ATP-dependent helicase activity;0.00429057995980513!GO:0016568;chromatin modification;0.0042908638113158!GO:0031902;late endosome membrane;0.00429620881225198!GO:0005667;transcription factor complex;0.00434659613776186!GO:0065004;protein-DNA complex assembly;0.0046628423948222!GO:0006979;response to oxidative stress;0.00469618939371194!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00470875219899856!GO:0005099;Ras GTPase activator activity;0.00476735871279556!GO:0004576;oligosaccharyl transferase activity;0.00488017936916131!GO:0030031;cell projection biogenesis;0.00490476048463239!GO:0007165;signal transduction;0.00491199490919156!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00502351135295971!GO:0005057;receptor signaling protein activity;0.00503378226986274!GO:0006091;generation of precursor metabolites and energy;0.00515732775351735!GO:0016791;phosphoric monoester hydrolase activity;0.00515943344890173!GO:0009889;regulation of biosynthetic process;0.00525575408222164!GO:0007005;mitochondrion organization and biogenesis;0.00536769127646733!GO:0001516;prostaglandin biosynthetic process;0.00540854210550179!GO:0046457;prostanoid biosynthetic process;0.00540854210550179!GO:0031326;regulation of cellular biosynthetic process;0.00570644888939195!GO:0007229;integrin-mediated signaling pathway;0.00586550041653527!GO:0005070;SH3/SH2 adaptor activity;0.00628981757397969!GO:0004386;helicase activity;0.00637696332724458!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00637696332724458!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00637696332724458!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00637696332724458!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00646595663979627!GO:0045045;secretory pathway;0.00663222855682625!GO:0007266;Rho protein signal transduction;0.00682642857750436!GO:0005912;adherens junction;0.00701125026394569!GO:0045454;cell redox homeostasis;0.00721082324690795!GO:0017166;vinculin binding;0.00743303481486317!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00743906209331976!GO:0007050;cell cycle arrest;0.00743906209331976!GO:0006644;phospholipid metabolic process;0.00760304802509491!GO:0016584;nucleosome positioning;0.00760304802509491!GO:0043021;ribonucleoprotein binding;0.00772071917254472!GO:0015630;microtubule cytoskeleton;0.0078826378645317!GO:0043407;negative regulation of MAP kinase activity;0.00794245580878387!GO:0030139;endocytic vesicle;0.00800520565356825!GO:0006402;mRNA catabolic process;0.00806615294302242!GO:0031589;cell-substrate adhesion;0.00806615294302242!GO:0009108;coenzyme biosynthetic process;0.00838781207337715!GO:0006650;glycerophospholipid metabolic process;0.00849800863152146!GO:0005048;signal sequence binding;0.00876478455895529!GO:0008632;apoptotic program;0.00890081571921145!GO:0000785;chromatin;0.00957896203073554!GO:0016787;hydrolase activity;0.00958814879085802!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00973079426476467!GO:0015629;actin cytoskeleton;0.0097477542002535!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00977552916822581!GO:0022402;cell cycle process;0.00990562473239166!GO:0065008;regulation of biological quality;0.00996971125259567!GO:0006892;post-Golgi vesicle-mediated transport;0.0100861151886409!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0100861151886409!GO:0006401;RNA catabolic process;0.0102455139931611!GO:0002253;activation of immune response;0.0106216157675313!GO:0065002;intracellular protein transport across a membrane;0.0110053211609706!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0111147529570364!GO:0050828;regulation of liquid surface tension;0.0111228476108373!GO:0004674;protein serine/threonine kinase activity;0.0112969043902858!GO:0046456;icosanoid biosynthetic process;0.0116256614990801!GO:0051276;chromosome organization and biogenesis;0.0117969082998915!GO:0030658;transport vesicle membrane;0.0117969082998915!GO:0051168;nuclear export;0.0120862666634115!GO:0051101;regulation of DNA binding;0.0121645516158538!GO:0016126;sterol biosynthetic process;0.0128806805971921!GO:0005813;centrosome;0.0130512225572382!GO:0048500;signal recognition particle;0.0130512225572382!GO:0005938;cell cortex;0.0130512225572382!GO:0030127;COPII vesicle coat;0.0130512225572382!GO:0012507;ER to Golgi transport vesicle membrane;0.0130512225572382!GO:0008139;nuclear localization sequence binding;0.0130512225572382!GO:0048660;regulation of smooth muscle cell proliferation;0.0131638089099158!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0131841056415501!GO:0043086;negative regulation of catalytic activity;0.0135182333918828!GO:0030099;myeloid cell differentiation;0.0136993683356248!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0136993683356248!GO:0008234;cysteine-type peptidase activity;0.0137744639737419!GO:0045637;regulation of myeloid cell differentiation;0.0137744639737419!GO:0004721;phosphoprotein phosphatase activity;0.0138012073680383!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0138122006545127!GO:0042221;response to chemical stimulus;0.0138181206050211!GO:0008186;RNA-dependent ATPase activity;0.0142470123623794!GO:0043488;regulation of mRNA stability;0.0145556697367915!GO:0043487;regulation of RNA stability;0.0145556697367915!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0148144704079591!GO:0006611;protein export from nucleus;0.0148312358584206!GO:0051028;mRNA transport;0.0150780071017264!GO:0046822;regulation of nucleocytoplasmic transport;0.0152291702809187!GO:0051287;NAD binding;0.0152770035995539!GO:0008610;lipid biosynthetic process;0.0155019682762079!GO:0030134;ER to Golgi transport vesicle;0.0156650612534374!GO:0042613;MHC class II protein complex;0.0158375208565982!GO:0051087;chaperone binding;0.0159265247398329!GO:0048646;anatomical structure formation;0.0159286352342574!GO:0030674;protein binding, bridging;0.0161020670129566!GO:0048487;beta-tubulin binding;0.0161315043469418!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0163889287914477!GO:0015399;primary active transmembrane transporter activity;0.0163889287914477!GO:0030595;leukocyte chemotaxis;0.0164743766835044!GO:0016311;dephosphorylation;0.0165833388129367!GO:0001725;stress fiber;0.0166164971536246!GO:0032432;actin filament bundle;0.0166164971536246!GO:0030132;clathrin coat of coated pit;0.0166291672181382!GO:0030659;cytoplasmic vesicle membrane;0.016674382161688!GO:0008287;protein serine/threonine phosphatase complex;0.016674382161688!GO:0030334;regulation of cell migration;0.0167438269467102!GO:0051271;negative regulation of cell motility;0.0168896806461915!GO:0046467;membrane lipid biosynthetic process;0.0169893814624102!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0170357611821048!GO:0022415;viral reproductive process;0.0171306117006032!GO:0007160;cell-matrix adhesion;0.0172270245732222!GO:0012506;vesicle membrane;0.0177813049301447!GO:0050811;GABA receptor binding;0.0177833874729636!GO:0017091;AU-rich element binding;0.0178702102535174!GO:0050779;RNA destabilization;0.0178702102535174!GO:0000289;poly(A) tail shortening;0.0178702102535174!GO:0051235;maintenance of localization;0.0187422825140915!GO:0018196;peptidyl-asparagine modification;0.0190549612391707!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0190549612391707!GO:0004197;cysteine-type endopeptidase activity;0.0191164106779278!GO:0030119;AP-type membrane coat adaptor complex;0.0192070027650572!GO:0007034;vacuolar transport;0.0193253336035487!GO:0003690;double-stranded DNA binding;0.0196892254959803!GO:0007040;lysosome organization and biogenesis;0.0201865208922785!GO:0018193;peptidyl-amino acid modification;0.0201865208922785!GO:0016859;cis-trans isomerase activity;0.0202860982171709!GO:0035035;histone acetyltransferase binding;0.0208783287043738!GO:0007041;lysosomal transport;0.020890182693955!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0213504162128396!GO:0004812;aminoacyl-tRNA ligase activity;0.0213504162128396!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0213504162128396!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0215596960037932!GO:0033043;regulation of organelle organization and biogenesis;0.0215596960037932!GO:0008637;apoptotic mitochondrial changes;0.0215847874730142!GO:0030131;clathrin adaptor complex;0.0218540928368992!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0221312336026368!GO:0045047;protein targeting to ER;0.0221312336026368!GO:0007162;negative regulation of cell adhesion;0.0222802423803862!GO:0055092;sterol homeostasis;0.0225576502480725!GO:0042632;cholesterol homeostasis;0.0225576502480725!GO:0003729;mRNA binding;0.0226358069305152!GO:0035258;steroid hormone receptor binding;0.022775280666432!GO:0004672;protein kinase activity;0.0227979202607471!GO:0003702;RNA polymerase II transcription factor activity;0.0228052203180254!GO:0044255;cellular lipid metabolic process;0.0229529801041548!GO:0006891;intra-Golgi vesicle-mediated transport;0.0231820243962445!GO:0005862;muscle thin filament tropomyosin;0.023227111115912!GO:0006334;nucleosome assembly;0.0232901083785211!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0234725761487818!GO:0051020;GTPase binding;0.0236963755469132!GO:0019207;kinase regulator activity;0.0240773044164248!GO:0043492;ATPase activity, coupled to movement of substances;0.0240773044164248!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0240773044164248!GO:0006470;protein amino acid dephosphorylation;0.024291293253153!GO:0051252;regulation of RNA metabolic process;0.0243108828745877!GO:0043038;amino acid activation;0.0243854305081889!GO:0006418;tRNA aminoacylation for protein translation;0.0243854305081889!GO:0043039;tRNA aminoacylation;0.0243854305081889!GO:0017048;Rho GTPase binding;0.0243854305081889!GO:0030384;phosphoinositide metabolic process;0.0243854305081889!GO:0019887;protein kinase regulator activity;0.0244349346063775!GO:0030218;erythrocyte differentiation;0.0249205469245909!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0249205469245909!GO:0030660;Golgi-associated vesicle membrane;0.025035856596688!GO:0016070;RNA metabolic process;0.0252148072038519!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0252148072038519!GO:0048659;smooth muscle cell proliferation;0.0256630482813197!GO:0008629;induction of apoptosis by intracellular signals;0.025904098930618!GO:0009986;cell surface;0.0260854104991394!GO:0006633;fatty acid biosynthetic process;0.0261157480399299!GO:0006955;immune response;0.0261157480399299!GO:0031349;positive regulation of defense response;0.0261681226827471!GO:0050729;positive regulation of inflammatory response;0.0261681226827471!GO:0031267;small GTPase binding;0.0264593502923792!GO:0002764;immune response-regulating signal transduction;0.0272459423066873!GO:0030518;steroid hormone receptor signaling pathway;0.0277368987193727!GO:0008305;integrin complex;0.0281850836131774!GO:0031325;positive regulation of cellular metabolic process;0.0289033394934284!GO:0030663;COPI coated vesicle membrane;0.0289195644724044!GO:0030126;COPI vesicle coat;0.0289195644724044!GO:0006984;ER-nuclear signaling pathway;0.0294209984643652!GO:0006516;glycoprotein catabolic process;0.0294212397292213!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0294212397292213!GO:0051098;regulation of binding;0.0296913717422205!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0311395385345166!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0317499911849811!GO:0004004;ATP-dependent RNA helicase activity;0.0318370859457578!GO:0044433;cytoplasmic vesicle part;0.0322467307694768!GO:0006672;ceramide metabolic process;0.0322605147226434!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0330956634765566!GO:0032763;regulation of mast cell cytokine production;0.0331523131521743!GO:0032762;mast cell cytokine production;0.0331523131521743!GO:0008285;negative regulation of cell proliferation;0.0334182635725133!GO:0009605;response to external stimulus;0.0334182635725133!GO:0005869;dynactin complex;0.0334976024403082!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0337445193444592!GO:0009117;nucleotide metabolic process;0.0354139378029108!GO:0019959;interleukin-8 binding;0.0367335222617128!GO:0010037;response to carbon dioxide;0.0367335222617128!GO:0045646;regulation of erythrocyte differentiation;0.0370131199663172!GO:0004722;protein serine/threonine phosphatase activity;0.0385918553286712!GO:0031901;early endosome membrane;0.0391070644684256!GO:0030833;regulation of actin filament polymerization;0.0396616673401999!GO:0031072;heat shock protein binding;0.0396667505322504!GO:0055088;lipid homeostasis;0.0398794499084912!GO:0004177;aminopeptidase activity;0.0408626814124548!GO:0006509;membrane protein ectodomain proteolysis;0.0408626814124548!GO:0033619;membrane protein proteolysis;0.0408626814124548!GO:0019834;phospholipase A2 inhibitor activity;0.0409438413821619!GO:0006376;mRNA splice site selection;0.0409438413821619!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0409438413821619!GO:0005815;microtubule organizing center;0.0409438413821619!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0415202461185192!GO:0008333;endosome to lysosome transport;0.0415202461185192!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0417432158747555!GO:0030521;androgen receptor signaling pathway;0.042037119702239!GO:0030137;COPI-coated vesicle;0.0427543289388014!GO:0040013;negative regulation of locomotion;0.0436616552837256!GO:0004185;serine carboxypeptidase activity;0.0439158935047532!GO:0022603;regulation of anatomical structure morphogenesis;0.0439158935047532!GO:0008360;regulation of cell shape;0.0439158935047532!GO:0022604;regulation of cell morphogenesis;0.0439158935047532!GO:0031497;chromatin assembly;0.043995548312683!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.043995548312683!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.043995548312683!GO:0030097;hemopoiesis;0.0443425423127316!GO:0022890;inorganic cation transmembrane transporter activity;0.0443687735913726!GO:0043405;regulation of MAP kinase activity;0.0447641763596479!GO:0050662;coenzyme binding;0.0451694154147086!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0457160672646614!GO:0001887;selenium metabolic process;0.0457160672646614!GO:0031529;ruffle organization and biogenesis;0.0463939139723645!GO:0008147;structural constituent of bone;0.0463939139723645!GO:0004563;beta-N-acetylhexosaminidase activity;0.0464910991776985!GO:0030832;regulation of actin filament length;0.046812293680899!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.046812293680899!GO:0015002;heme-copper terminal oxidase activity;0.046812293680899!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.046812293680899!GO:0004129;cytochrome-c oxidase activity;0.046812293680899!GO:0016064;immunoglobulin mediated immune response;0.046812293680899!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.046812293680899!GO:0033367;protein localization in mast cell secretory granule;0.046812293680899!GO:0033365;protein localization in organelle;0.046812293680899!GO:0033371;T cell secretory granule organization and biogenesis;0.046812293680899!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.046812293680899!GO:0033375;protease localization in T cell secretory granule;0.046812293680899!GO:0042629;mast cell granule;0.046812293680899!GO:0033377;maintenance of protein localization in T cell secretory granule;0.046812293680899!GO:0033364;mast cell secretory granule organization and biogenesis;0.046812293680899!GO:0033380;granzyme B localization in T cell secretory granule;0.046812293680899!GO:0033379;maintenance of protease localization in T cell secretory granule;0.046812293680899!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.046812293680899!GO:0033368;protease localization in mast cell secretory granule;0.046812293680899!GO:0033366;protein localization in secretory granule;0.046812293680899!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.046812293680899!GO:0033374;protein localization in T cell secretory granule;0.046812293680899!GO:0007033;vacuole organization and biogenesis;0.0471780336911093!GO:0048002;antigen processing and presentation of peptide antigen;0.0481676883646959!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.048602176599276!GO:0032535;regulation of cellular component size;0.0491495319893554!GO:0051015;actin filament binding;0.0498007531495368 | |||
|sample_id=10019 | |sample_id=10019 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 101: | ||
|sample_tissue=lung | |sample_tissue=lung | ||
|top_motifs=HBP1_HMGB_SSRP1_UBTF:2.43874378994;SP1:2.38762220825;FOXA2:2.38316416028;FOX{D1,D2}:2.31703325094;EP300:2.27877076863;STAT2,4,6:2.24879169102;TLX2:2.21225730851;NFATC1..3:2.11689228227;TBP:2.04514480074;MAZ:2.0207806586;AR:2.01307183663;FOX{I1,J2}:1.98610572625;FOX{F1,F2,J1}:1.97267424197;T:1.82827012686;TFAP4:1.79765716879;FOXO1,3,4:1.75697702119;TFCP2:1.7284235757;TBX4,5:1.63554904515;RFX2..5_RFXANK_RFXAP:1.51713758655;TLX1..3_NFIC{dimer}:1.46970588395;ETS1,2:1.46825486643;HMX1:1.38253497082;SPZ1:1.36766488951;IRF1,2:1.35974074817;SRF:1.27534818581;NKX3-2:1.27323235278;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.24649145633;XCPE1{core}:1.22109775601;PATZ1:1.20100577608;POU2F1..3:1.19433880349;MYFfamily:1.1582235875;SNAI1..3:1.15640546762;IRF7:1.13975721125;ZNF148:1.08359664563;PRDM1:1.07162845255;MZF1:1.06463147149;ZEB1:1.04097779129;MTF1:1.02265016654;SMAD1..7,9:1.00792633245;MTE{core}:0.986894119971;GTF2I:0.961668698282;TFAP2{A,C}:0.932143889456;MED-1{core}:0.919847418877;ZNF238:0.906427550187;JUN:0.899971644615;GATA6:0.850704704738;TGIF1:0.842139589594;EGR1..3:0.823247628252;HOX{A6,A7,B6,B7}:0.780314217396;ATF2:0.776696551816;HSF1,2:0.771138567424;SPIB:0.763598864479;GZF1:0.757459590434;ZNF423:0.738153429706;RBPJ:0.723765892217;HAND1,2:0.719535464464;MEF2{A,B,C,D}:0.71773329311;FOXN1:0.708137842658;SOX5:0.689134467156;HNF1A:0.688482065336;STAT1,3:0.67477818232;IKZF2:0.672613468592;HIC1:0.653118106932;TEAD1:0.647771437963;NANOG:0.629946001014;PAX1,9:0.616805991026;ATF6:0.59955696063;TFAP2B:0.593186752543;GTF2A1,2:0.589862704013;RFX1:0.574974139082;PAX6:0.571625225393;SPI1:0.568814981565;RUNX1..3:0.567552008739;NR3C1:0.559911575509;IKZF1:0.549752310328;SREBF1,2:0.520288494774;NR1H4:0.501845107924;GATA4:0.473467660996;FOXL1:0.462218882665;ZFP161:0.431950695237;GCM1,2:0.415429095315;XBP1:0.413900927555;MYBL2:0.405174165542;MYOD1:0.399568827937;EBF1:0.372418253717;HNF4A_NR2F1,2:0.371126609682;DMAP1_NCOR{1,2}_SMARC:0.369167534939;POU5F1:0.366205129376;HES1:0.363597986083;NR6A1:0.354100925493;ELF1,2,4:0.342659202327;HLF:0.334437825586;MAFB:0.247579442785;CEBPA,B_DDIT3:0.245099451361;RREB1:0.221385547296;BPTF:0.216337686371;FOXP3:0.199414728128;GFI1B:0.191509810062;ATF4:0.175856258316;ESR1:0.15499237449;PAX5:0.148186124626;GLI1..3:0.141824820239;FOXQ1:0.136141798868;NKX2-3_NKX2-5:0.129001040138;LMO2:0.114420119464;REST:0.101250784899;ZIC1..3:0.0837786102212;NFKB1_REL_RELA:0.0804142701143;HMGA1,2:0.0471235257147;NFIL3:0.0470803539826;NKX2-1,4:0.0460959777539;DBP:0.0455169496791;SOX2:0.00440236141573;NHLH1,2:-0.00248084504343;BREu{core}:-0.0175312346638;RXR{A,B,G}:-0.0274703358593;ALX4:-0.0322763819488;CDC5L:-0.0652553255988;FOSL2:-0.0731625307167;NFIX:-0.0779530921116;CREB1:-0.0873429135743;CDX1,2,4:-0.118876464644;SOX{8,9,10}:-0.129697031739;STAT5{A,B}:-0.13448782582;ATF5_CREB3:-0.186522327526;KLF4:-0.198747957544;NFE2:-0.213148310706;FOXD3:-0.224447402728;NFY{A,B,C}:-0.280595983547;PBX1:-0.283810734075;bHLH_family:-0.347182813973;POU3F1..4:-0.362479127144;ESRRA:-0.398373551325;ALX1:-0.416328320862;HIF1A:-0.418648300055;NFE2L2:-0.419191817341;FOS_FOS{B,L1}_JUN{B,D}:-0.426520659857;TAL1_TCF{3,4,12}:-0.437848627563;NR5A1,2:-0.444059718529;NANOG{mouse}:-0.449919702959;PAX2:-0.458425102138;BACH2:-0.477106762031;LEF1_TCF7_TCF7L1,2:-0.481416987099;ADNP_IRX_SIX_ZHX:-0.487466160354;UFEwm:-0.491210133331;RXRA_VDR{dimer}:-0.546145191377;TP53:-0.548110154229;AHR_ARNT_ARNT2:-0.584866677513;NKX2-2,8:-0.590350072144;SOX17:-0.600671320403;AIRE:-0.600994080903;PITX1..3:-0.615870112233;GFI1:-0.620427276295;FOXP1:-0.634023852334;TFDP1:-0.646496636144;NFE2L1:-0.665504688756;ARID5B:-0.709443636567;NKX6-1,2:-0.766570163731;MYB:-0.769550236791;CUX2:-0.77592750073;PPARG:-0.786056263247;ZBTB6:-0.793138072558;NKX3-1:-0.807029828949;TEF:-0.816321494693;PRRX1,2:-0.846424686661;EN1,2:-0.864736890572;ZNF143:-0.90920068023;POU6F1:-0.983461422633;E2F1..5:-0.991474866741;ZNF384:-0.999897144133;ZBTB16:-1.00430600571;HOX{A5,B5}:-1.05478171311;NRF1:-1.07086374698;OCT4_SOX2{dimer}:-1.12757494104;POU1F1:-1.15587641152;TOPORS:-1.18779914762;RORA:-1.21661106843;CRX:-1.2252658293;PAX3,7:-1.28192574987;HOX{A4,D4}:-1.32871439646;LHX3,4:-1.33301132872;EVI1:-1.33800971695;PAX8:-1.33843878515;VSX1,2:-1.48645408534;PDX1:-1.50588398443;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.55720357568;FOXM1:-1.71314915635;HOXA9_MEIS1:-1.98206952981;YY1:-2.08911964113;ONECUT1,2:-2.13700354881;ELK1,4_GABP{A,B1}:-2.2691920441;PAX4:-2.40992928284 | |top_motifs=HBP1_HMGB_SSRP1_UBTF:2.43874378994;SP1:2.38762220825;FOXA2:2.38316416028;FOX{D1,D2}:2.31703325094;EP300:2.27877076863;STAT2,4,6:2.24879169102;TLX2:2.21225730851;NFATC1..3:2.11689228227;TBP:2.04514480074;MAZ:2.0207806586;AR:2.01307183663;FOX{I1,J2}:1.98610572625;FOX{F1,F2,J1}:1.97267424197;T:1.82827012686;TFAP4:1.79765716879;FOXO1,3,4:1.75697702119;TFCP2:1.7284235757;TBX4,5:1.63554904515;RFX2..5_RFXANK_RFXAP:1.51713758655;TLX1..3_NFIC{dimer}:1.46970588395;ETS1,2:1.46825486643;HMX1:1.38253497082;SPZ1:1.36766488951;IRF1,2:1.35974074817;SRF:1.27534818581;NKX3-2:1.27323235278;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.24649145633;XCPE1{core}:1.22109775601;PATZ1:1.20100577608;POU2F1..3:1.19433880349;MYFfamily:1.1582235875;SNAI1..3:1.15640546762;IRF7:1.13975721125;ZNF148:1.08359664563;PRDM1:1.07162845255;MZF1:1.06463147149;ZEB1:1.04097779129;MTF1:1.02265016654;SMAD1..7,9:1.00792633245;MTE{core}:0.986894119971;GTF2I:0.961668698282;TFAP2{A,C}:0.932143889456;MED-1{core}:0.919847418877;ZNF238:0.906427550187;JUN:0.899971644615;GATA6:0.850704704738;TGIF1:0.842139589594;EGR1..3:0.823247628252;HOX{A6,A7,B6,B7}:0.780314217396;ATF2:0.776696551816;HSF1,2:0.771138567424;SPIB:0.763598864479;GZF1:0.757459590434;ZNF423:0.738153429706;RBPJ:0.723765892217;HAND1,2:0.719535464464;MEF2{A,B,C,D}:0.71773329311;FOXN1:0.708137842658;SOX5:0.689134467156;HNF1A:0.688482065336;STAT1,3:0.67477818232;IKZF2:0.672613468592;HIC1:0.653118106932;TEAD1:0.647771437963;NANOG:0.629946001014;PAX1,9:0.616805991026;ATF6:0.59955696063;TFAP2B:0.593186752543;GTF2A1,2:0.589862704013;RFX1:0.574974139082;PAX6:0.571625225393;SPI1:0.568814981565;RUNX1..3:0.567552008739;NR3C1:0.559911575509;IKZF1:0.549752310328;SREBF1,2:0.520288494774;NR1H4:0.501845107924;GATA4:0.473467660996;FOXL1:0.462218882665;ZFP161:0.431950695237;GCM1,2:0.415429095315;XBP1:0.413900927555;MYBL2:0.405174165542;MYOD1:0.399568827937;EBF1:0.372418253717;HNF4A_NR2F1,2:0.371126609682;DMAP1_NCOR{1,2}_SMARC:0.369167534939;POU5F1:0.366205129376;HES1:0.363597986083;NR6A1:0.354100925493;ELF1,2,4:0.342659202327;HLF:0.334437825586;MAFB:0.247579442785;CEBPA,B_DDIT3:0.245099451361;RREB1:0.221385547296;BPTF:0.216337686371;FOXP3:0.199414728128;GFI1B:0.191509810062;ATF4:0.175856258316;ESR1:0.15499237449;PAX5:0.148186124626;GLI1..3:0.141824820239;FOXQ1:0.136141798868;NKX2-3_NKX2-5:0.129001040138;LMO2:0.114420119464;REST:0.101250784899;ZIC1..3:0.0837786102212;NFKB1_REL_RELA:0.0804142701143;HMGA1,2:0.0471235257147;NFIL3:0.0470803539826;NKX2-1,4:0.0460959777539;DBP:0.0455169496791;SOX2:0.00440236141573;NHLH1,2:-0.00248084504343;BREu{core}:-0.0175312346638;RXR{A,B,G}:-0.0274703358593;ALX4:-0.0322763819488;CDC5L:-0.0652553255988;FOSL2:-0.0731625307167;NFIX:-0.0779530921116;CREB1:-0.0873429135743;CDX1,2,4:-0.118876464644;SOX{8,9,10}:-0.129697031739;STAT5{A,B}:-0.13448782582;ATF5_CREB3:-0.186522327526;KLF4:-0.198747957544;NFE2:-0.213148310706;FOXD3:-0.224447402728;NFY{A,B,C}:-0.280595983547;PBX1:-0.283810734075;bHLH_family:-0.347182813973;POU3F1..4:-0.362479127144;ESRRA:-0.398373551325;ALX1:-0.416328320862;HIF1A:-0.418648300055;NFE2L2:-0.419191817341;FOS_FOS{B,L1}_JUN{B,D}:-0.426520659857;TAL1_TCF{3,4,12}:-0.437848627563;NR5A1,2:-0.444059718529;NANOG{mouse}:-0.449919702959;PAX2:-0.458425102138;BACH2:-0.477106762031;LEF1_TCF7_TCF7L1,2:-0.481416987099;ADNP_IRX_SIX_ZHX:-0.487466160354;UFEwm:-0.491210133331;RXRA_VDR{dimer}:-0.546145191377;TP53:-0.548110154229;AHR_ARNT_ARNT2:-0.584866677513;NKX2-2,8:-0.590350072144;SOX17:-0.600671320403;AIRE:-0.600994080903;PITX1..3:-0.615870112233;GFI1:-0.620427276295;FOXP1:-0.634023852334;TFDP1:-0.646496636144;NFE2L1:-0.665504688756;ARID5B:-0.709443636567;NKX6-1,2:-0.766570163731;MYB:-0.769550236791;CUX2:-0.77592750073;PPARG:-0.786056263247;ZBTB6:-0.793138072558;NKX3-1:-0.807029828949;TEF:-0.816321494693;PRRX1,2:-0.846424686661;EN1,2:-0.864736890572;ZNF143:-0.90920068023;POU6F1:-0.983461422633;E2F1..5:-0.991474866741;ZNF384:-0.999897144133;ZBTB16:-1.00430600571;HOX{A5,B5}:-1.05478171311;NRF1:-1.07086374698;OCT4_SOX2{dimer}:-1.12757494104;POU1F1:-1.15587641152;TOPORS:-1.18779914762;RORA:-1.21661106843;CRX:-1.2252658293;PAX3,7:-1.28192574987;HOX{A4,D4}:-1.32871439646;LHX3,4:-1.33301132872;EVI1:-1.33800971695;PAX8:-1.33843878515;VSX1,2:-1.48645408534;PDX1:-1.50588398443;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.55720357568;FOXM1:-1.71314915635;HOXA9_MEIS1:-1.98206952981;YY1:-2.08911964113;ONECUT1,2:-2.13700354881;ELK1,4_GABP{A,B1}:-2.2691920441;PAX4:-2.40992928284 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10019-101D1;search_select_hide=table117:FF:10019-101D1 | |||
}} | }} | ||
Latest revision as of 12:14, 3 June 2020
| Name: | lung, adult, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10625 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10625
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10625
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0917 |
| 10 | 10 | 0.0122 |
| 100 | 100 | 0.189 |
| 101 | 101 | 0.658 |
| 102 | 102 | 0.838 |
| 103 | 103 | 0.449 |
| 104 | 104 | 0.975 |
| 105 | 105 | 0.417 |
| 106 | 106 | 0.16 |
| 107 | 107 | 0.0393 |
| 108 | 108 | 0.92 |
| 109 | 109 | 0.239 |
| 11 | 11 | 0.236 |
| 110 | 110 | 0.313 |
| 111 | 111 | 0.0858 |
| 112 | 112 | 0.711 |
| 113 | 113 | 0.834 |
| 114 | 114 | 0.0381 |
| 115 | 115 | 0.248 |
| 116 | 116 | 0.158 |
| 117 | 117 | 0.0293 |
| 118 | 118 | 0.0386 |
| 119 | 119 | 0.208 |
| 12 | 12 | 0.611 |
| 120 | 120 | 0.0339 |
| 121 | 121 | 0.471 |
| 122 | 122 | 0.655 |
| 123 | 123 | 0.0135 |
| 124 | 124 | 0.816 |
| 125 | 125 | 0.165 |
| 126 | 126 | 0.192 |
| 127 | 127 | 0.935 |
| 128 | 128 | 0.33 |
| 129 | 129 | 0.0187 |
| 13 | 13 | 0.338 |
| 130 | 130 | 0.424 |
| 131 | 131 | 0.0548 |
| 132 | 132 | 0.456 |
| 133 | 133 | 0.0548 |
| 134 | 134 | 0.237 |
| 135 | 135 | 0.0286 |
| 136 | 136 | 0.776 |
| 137 | 137 | 0.256 |
| 138 | 138 | 0.998 |
| 139 | 139 | 0.336 |
| 14 | 14 | 0.727 |
| 140 | 140 | 0.0552 |
| 141 | 141 | 0.23 |
| 142 | 142 | 0.373 |
| 143 | 143 | 0.413 |
| 144 | 144 | 0.589 |
| 145 | 145 | 0.553 |
| 146 | 146 | 0.243 |
| 147 | 147 | 0.808 |
| 148 | 148 | 0.444 |
| 149 | 149 | 0.332 |
| 15 | 15 | 0.421 |
| 150 | 150 | 0.863 |
| 151 | 151 | 0.873 |
| 152 | 152 | 0.0344 |
| 153 | 153 | 0.642 |
| 154 | 154 | 0.479 |
| 155 | 155 | 0.385 |
| 156 | 156 | 0.994 |
| 157 | 157 | 0.591 |
| 158 | 158 | 0.527 |
| 159 | 159 | 0.852 |
| 16 | 16 | 0.951 |
| 160 | 160 | 0.941 |
| 161 | 161 | 0.348 |
| 162 | 162 | 0.983 |
| 163 | 163 | 0.701 |
| 164 | 164 | 0.0169 |
| 165 | 165 | 0.0131 |
| 166 | 166 | 0.587 |
| 167 | 167 | 0.00482 |
| 168 | 168 | 0.15 |
| 169 | 169 | 0.693 |
| 17 | 17 | 0.958 |
| 18 | 18 | 0.0805 |
| 19 | 19 | 0.37 |
| 2 | 2 | 0.0707 |
| 20 | 20 | 0.127 |
| 21 | 21 | 0.454 |
| 22 | 22 | 0.593 |
| 23 | 23 | 0.0823 |
| 24 | 24 | 0.618 |
| 25 | 25 | 0.466 |
| 26 | 26 | 0.393 |
| 27 | 27 | 0.635 |
| 28 | 28 | 0.889 |
| 29 | 29 | 0.0289 |
| 3 | 3 | 0.276 |
| 30 | 30 | 0.0237 |
| 31 | 31 | 0.999 |
| 32 | 32 | 0.68 |
| 33 | 33 | 0.517 |
| 34 | 34 | 0.168 |
| 35 | 35 | 0.203 |
| 36 | 36 | 0.0759 |
| 37 | 37 | 0.441 |
| 38 | 38 | 0.941 |
| 39 | 39 | 0.11 |
| 4 | 4 | 0.0958 |
| 40 | 40 | 0.452 |
| 41 | 41 | 0.518 |
| 42 | 42 | 0.366 |
| 43 | 43 | 0.685 |
| 44 | 44 | 0.861 |
| 45 | 45 | 0.0971 |
| 46 | 46 | 0.306 |
| 47 | 47 | 0.176 |
| 48 | 48 | 0.245 |
| 49 | 49 | 0.211 |
| 5 | 5 | 0.838 |
| 50 | 50 | 0.569 |
| 51 | 51 | 0.812 |
| 52 | 52 | 0.0428 |
| 53 | 53 | 0.697 |
| 54 | 54 | 0.908 |
| 55 | 55 | 0.47 |
| 56 | 56 | 0.99 |
| 57 | 57 | 0.0347 |
| 58 | 58 | 0.798 |
| 59 | 59 | 0.343 |
| 6 | 6 | 0.483 |
| 60 | 60 | 0.19 |
| 61 | 61 | 0.694 |
| 62 | 62 | 0.587 |
| 63 | 63 | 0.997 |
| 64 | 64 | 0.287 |
| 65 | 65 | 0.745 |
| 66 | 66 | 0.0449 |
| 67 | 67 | 0.753 |
| 68 | 68 | 0.567 |
| 69 | 69 | 0.852 |
| 7 | 7 | 0.861 |
| 70 | 70 | 0.0642 |
| 71 | 71 | 0.109 |
| 72 | 72 | 0.282 |
| 73 | 73 | 0.974 |
| 74 | 74 | 0.761 |
| 75 | 75 | 0.00565 |
| 76 | 76 | 0.0402 |
| 77 | 77 | 0.177 |
| 78 | 78 | 0.294 |
| 79 | 79 | 0.891 |
| 8 | 8 | 0.47 |
| 80 | 80 | 0.0178 |
| 81 | 81 | 0.541 |
| 82 | 82 | 0.689 |
| 83 | 83 | 0.284 |
| 84 | 84 | 0.862 |
| 85 | 85 | 0.343 |
| 86 | 86 | 0.639 |
| 87 | 87 | 0.741 |
| 88 | 88 | 0.944 |
| 89 | 89 | 0.734 |
| 9 | 9 | 0.165 |
| 90 | 90 | 0.0534 |
| 91 | 91 | 0.738 |
| 92 | 92 | 0.705 |
| 93 | 93 | 0.0492 |
| 94 | 94 | 0.192 |
| 95 | 95 | 0.286 |
| 96 | 96 | 0.755 |
| 97 | 97 | 0.593 |
| 98 | 98 | 0.155 |
| 99 | 99 | 0.855 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10625
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010019 human lung - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002048 (lung)
0002100 (trunk)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000117 (respiratory tube)
0000171 (respiration organ)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010019 (human lung - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
