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(Created page with "{{f5samples |id=FF:10414-106B9 |name=maxillary sinus tumor cell line:HSQ-89, biol_rep1 |sample_id=10414 |rna_tube_id=106B9 |rna_box=106 |rna_position=B9 |sample_cell_lo...")
 
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{{f5samples
{{f5samples
|id=FF:10414-106B9
|DRA_sample_Accession=CAGE@SAMD00005218
|name=maxillary sinus tumor cell line:HSQ-89, biol_rep1
|HumanCAGEScanFiles=NCig10055;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.NCig10055.10414-106B9.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.NCig10055.10414-106B9.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.NCig10055.10414-106B9.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.cell_line.CAGEScan/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.NCig10055.10414-106B9.hg19.GCTATA.pairs.bed.gz
|sample_id=10414
|accession_numbers=CAGE;DRX007927;DRR008799;DRZ000224;DRZ001609;DRZ011574;DRZ012959
|rna_tube_id=106B9
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000033,UBERON:0001764,UBERON:0000466,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0001825,UBERON:0000464,UBERON:0001004,UBERON:0000153,UBERON:0007811
|rna_box=106
|rna_position=B9
|sample_cell_lot=
|sample_cell_catalog=RCB0789
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=74 year old adult
|sample_tissue=sinus
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=74
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=1.73000
|rna_od260/280=1.89000
|sample_cell_type=unclassifiable
|sample_cell_line=HSQ-89  
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=maxillary sinus tumor
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=89.94700
|rna_concentration=3.59788
|sample_note=machine failed, remainder reloaded, low amount
|profile_hcage=CNhs10732,LSID691,release008,COMPLETED
|profile_cagescan=NCig10055,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000153,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0001004,UBERON:0001062,UBERON:0001764,UBERON:0001825,UBERON:0002553
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:0050615,DOID:162,DOID:14566,DOID:0050619,DOID:1357
|ancestors_in_disease_facet=DOID:4,DOID:7
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001
|sample_description=
|comment=
 
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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chr14:89029323..89029329,+!p4@ZC3H14!0.28!1.41!ZC3H14;;chr19:12163769..12163798,-!p1@ZNF878!0.28!1.41!ZNF878;;chr19:36545320..36545335,-!p5@THAP8!0.28!1.26!THAP8;;chr12:54694758..54694805,-!p1@NFE2!0.28!1.26!NFE2;;chr20:62601309..62601320,-!p2@ZNF512B!0.28!1.26!ZNF512B;;chr6:151694975..151694979,-!p7@ZBTB2!0.28!1.26!ZBTB2;;chr19:57019098..57019142,+!p3@ZNF471!0.28!1.10!ZNF471;;chr4:146860163..146860188,-!p5@ZNF827!0.28!1.10!ZNF827;;chr22:39916558..39916579,+!p1@ATF4!0.27!498.02!ATF4;;chr2:187350973..187351072,+!p1@ZC3H15!0.27!148.26!ZC3H15;;chrX:70503447..70503517,+!p1@NONO!0.27!137.27!NONO;;chr12:51157837..51157892,+!p1@ATF1!0.27!36.12!ATF1;;chr3:71114066..71114114,-!p1@FOXP1!0.27!34.24!FOXP1;;chr7:139762641..139762768,-!p1@PARP12!0.27!22.62!PARP12;;chr15:96873892..96873919,+!p4@NR2F2!0.27!16.02!NR2F2;;chr17:36861496..36861586,+!p1@MLLT6!0.27!15.71!MLLT6;;chr10:105110831..105110885,-!p1@PCGF6!0.27!15.71!PCGF6;;chr3:71179699..71179744,-!p2@FOXP1!0.27!11.94!FOXP1;;chr19:56110859..56110917,-!p1@FIZ1!0.27!10.37!FIZ1;;chr19:49140609..49140643,-!p1@DBP!0.27!8.95!DBP;;chr17:5015129..5015187,-!p1@ZNF232!0.27!8.48!ZNF232;;chr5:178157651..178157689,-!p1@ZNF354A!0.27!6.28!ZNF354A;;chr1:164528384..164528409,+!p3@PBX1!0.27!4.55!PBX1;;chr19:36705617..36705644,+!p4@ZNF146!0.27!4.08!ZNF146;;chr15:56535946..56535987,-!p1@RFX7!0.27!3.14!RFX7;;chr6:91006518..91006570,-!p1@BACH2!0.27!3.14!BACH2;;chr19:52839515..52839572,+!p1@ZNF610!0.27!2.83!ZNF610;;chr1:91487516..91487528,-!p4@ZNF644!0.27!2.83!ZNF644;;chr12:57919364..57919394,+!p4@MBD6!0.27!2.67!MBD6;;chr19:10305752..10305792,-!p2@DNMT1!0.27!2.20!DNMT1;;chr12:50479101..50479108,+!p3@SMARCD1!0.27!1.88!SMARCD1;;chr5:178287021..178287042,+!p2@ZNF354B!0.27!1.88!ZNF354B;;chr7:74072288..74072299,+!p7@GTF2I!0.27!1.41!GTF2I;;chr12:133706975..133707013,-!p3@ZNF891!0.27!1.41!ZNF891;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.27!1.41!GLIS2;;chr11:19262486..19262512,-!p4@E2F8!0.27!1.26!E2F8;;chr6:122720681..122720713,+!p3@HSF2!0.27!1.26!HSF2;;chr19:52839490..52839508,+!p2@ZNF610!0.27!1.26!ZNF610;;chr1:67395833..67395851,+!p8@MIER1!0.27!1.26!MIER1;;chr3:141868230..141868250,-!p6@TFDP2!0.27!1.26!TFDP2;;chr5:124080203..124080258,-!p5@ZNF608!0.27!1.10!ZNF608;;chr1:6845497..6845561,+!p1@CAMTA1!0.26!60.31!CAMTA1;;chr6:44355423..44355470,+!p1@CDC5L!0.26!58.74!CDC5L;;chr13:46626847..46626899,-!p1@ZC3H13!0.26!51.20!ZC3H13;;chr17:38804061..38804112,-!p1@SMARCE1!0.26!43.66!SMARCE1;;chr17:61920023..61920110,-!p1@SMARCD2!0.26!22.46!SMARCD2;;chr19:58331088..58331106,+!p1@ZNF587!0.26!22.46!ZNF587;;chr6:87865262..87865311,+!p1@ZNF292!0.26!21.36!ZNF292;;chr1:151431909..151431987,-!p1@POGZ!0.26!18.85!POGZ;;chr1:41157266..41157314,+!p3@NFYC!0.26!13.19!NFYC;;chr7:26191809..26191890,+!p1@NFE2L3!0.26!7.54!NFE2L3;;chr19:53073532..53073551,+!p1@ZNF701!0.26!6.75!ZNF701;;chr9:125693757..125693818,-!p1@ZBTB26!0.26!6.60!ZBTB26;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.26!6.13!ZNF816;;chr6:35227282..35227330,+!p2@ZNF76!0.26!5.34!ZNF76;;chr19:52408285..52408310,-!p3@ZNF649!0.26!3.14!ZNF649;;chr19:35168633..35168652,+!p2@ZNF302!0.26!3.14!ZNF302;;chr14:61191018..61191048,-!p1@SIX4!0.26!2.83!SIX4;;chr20:42143077..42143126,+!p1@L3MBTL1!0.26!2.67!L3MBTL;;chr16:31724618..31724630,+!p2@ZNF720!0.26!2.36!ZNF720;;chr3:178789622..178789633,-!p3@ZMAT3!0.26!2.36!ZMAT3;;chr5:132299572..132299623,-!p6@AFF4!0.26!2.20!AFF4;;chr18:32924431..32924440,-!p2@ZNF24!0.26!2.04!ZNF24;;chr10:114710553..114710585,+!p6@TCF7L2!0.26!2.04!TCF7L2;;chr2:85981222..85981259,+!p2@ATOH8!0.26!1.88!ATOH8;;chr19:37019569..37019593,-!p2@ZNF260!0.26!1.88!ZNF260;;chr6:168227611..168227624,+!p2@MLLT4!0.26!1.57!MLLT4;;
|fonse_cell_line=FF:10414-106B9
|fonse_cell_line=FF:10414-106B9
|fonse_cell_line_closure=FF:10414-106B9
|fonse_cell_line_closure=FF:10414-106B9
Line 67: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.CNhs10732.10414-106B9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.CNhs10732.10414-106B9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.CNhs10732.10414-106B9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.CNhs10732.10414-106B9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/maxillary%2520sinus%2520tumor%2520cell%2520line%253aHSQ-89.CNhs10732.10414-106B9.hg38.nobarcode.ctss.bed.gz
|id=FF:10414-106B9
|is_a=DOID:1357;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0001764
|is_obsolete=
|library_id=CNhs10732
|library_id_phase_based=2:CNhs10732
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10414
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10414
|name=maxillary sinus tumor cell line:HSQ-89
|namespace=FANTOM5
|part_of=
|profile_cagescan=NCig10055,,,
|profile_hcage=CNhs10732,LSID691,release008,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=106
|rna_catalog_number=
|rna_concentration=3.59788
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.73
|rna_od260/280=1.89
|rna_position=B9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=106B9
|rna_weight_ug=89.947
|sample_age=74
|sample_category=cell lines
|sample_cell_catalog=RCB0789
|sample_cell_line=HSQ-89
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=74 year old adult
|sample_disease=maxillary sinus tumor
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.18449122674741e-268!GO:0043226;organelle;5.98480880991115e-229!GO:0043229;intracellular organelle;6.25611591621362e-228!GO:0043231;intracellular membrane-bound organelle;1.77823761076705e-225!GO:0043227;membrane-bound organelle;1.77823761076705e-225!GO:0005737;cytoplasm;4.14482972928989e-156!GO:0044422;organelle part;8.73969236820713e-148!GO:0044446;intracellular organelle part;8.26124253185825e-146!GO:0005634;nucleus;1.38234515954413e-115!GO:0044444;cytoplasmic part;2.49069113374534e-106!GO:0044237;cellular metabolic process;3.25937588359356e-100!GO:0044238;primary metabolic process;7.60406873520198e-99!GO:0043170;macromolecule metabolic process;6.73309706369567e-98!GO:0032991;macromolecular complex;3.85331293440312e-96!GO:0003723;RNA binding;2.06971286695247e-89!GO:0030529;ribonucleoprotein complex;3.7980591074887e-88!GO:0044428;nuclear part;3.52562243990497e-84!GO:0043233;organelle lumen;2.78308027888523e-81!GO:0031974;membrane-enclosed lumen;2.78308027888523e-81!GO:0043283;biopolymer metabolic process;9.6844328395046e-71!GO:0010467;gene expression;3.15126725795789e-68!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.65089243387112e-64!GO:0006396;RNA processing;1.58207716357572e-58!GO:0005739;mitochondrion;7.95734664029881e-56!GO:0031981;nuclear lumen;1.68601455111614e-53!GO:0005515;protein binding;2.52291936906778e-52!GO:0003676;nucleic acid binding;4.06670278579651e-52!GO:0005840;ribosome;1.772144959723e-49!GO:0006412;translation;2.50778415492537e-48!GO:0016043;cellular component organization and biogenesis;2.42950143401863e-47!GO:0043234;protein complex;1.14720378050081e-46!GO:0016071;mRNA metabolic process;2.20515196781443e-46!GO:0033036;macromolecule localization;2.17773389491935e-44!GO:0031090;organelle membrane;2.27136655861162e-44!GO:0015031;protein transport;1.03161238706808e-43!GO:0003735;structural constituent of ribosome;1.81431847677444e-42!GO:0019538;protein metabolic process;3.97340233680123e-42!GO:0008380;RNA splicing;8.25357514606749e-42!GO:0008104;protein localization;8.2596497030468e-40!GO:0016070;RNA metabolic process;1.91595835323367e-39!GO:0006397;mRNA processing;6.40290795660896e-39!GO:0045184;establishment of protein localization;1.24952419936541e-38!GO:0044429;mitochondrial part;1.43571464126717e-38!GO:0044267;cellular protein metabolic process;2.43974616075488e-38!GO:0033279;ribosomal subunit;7.61856166755506e-38!GO:0044260;cellular macromolecule metabolic process;1.33820172503488e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.3508427837431e-36!GO:0031967;organelle envelope;3.4270599056588e-36!GO:0031975;envelope;6.33621413499497e-36!GO:0006996;organelle organization and biogenesis;1.36733315726557e-35!GO:0046907;intracellular transport;1.84576799990819e-35!GO:0043228;non-membrane-bound organelle;5.16307773076069e-35!GO:0043232;intracellular non-membrane-bound organelle;5.16307773076069e-35!GO:0005654;nucleoplasm;1.6034088600126e-34!GO:0009059;macromolecule biosynthetic process;4.58830900353227e-34!GO:0044249;cellular biosynthetic process;1.52497298772053e-33!GO:0005829;cytosol;2.22306336189397e-33!GO:0065003;macromolecular complex assembly;9.40146714953247e-33!GO:0009058;biosynthetic process;2.85667559597329e-32!GO:0006259;DNA metabolic process;7.66865084923883e-32!GO:0000166;nucleotide binding;2.06463945614805e-29!GO:0022607;cellular component assembly;4.21501769477581e-29!GO:0044451;nucleoplasm part;4.42147997958784e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.62924933215732e-29!GO:0006886;intracellular protein transport;3.43626125129301e-28!GO:0005681;spliceosome;4.80728196819298e-28!GO:0051649;establishment of cellular localization;1.6026309676888e-26!GO:0051641;cellular localization;1.36363582902404e-25!GO:0005740;mitochondrial envelope;6.39161663419617e-24!GO:0016874;ligase activity;2.15065373500402e-23!GO:0019866;organelle inner membrane;3.40144017445501e-23!GO:0022618;protein-RNA complex assembly;1.11691209796285e-22!GO:0031966;mitochondrial membrane;2.84652754519466e-22!GO:0007049;cell cycle;4.83480560075558e-22!GO:0006511;ubiquitin-dependent protein catabolic process;4.95823518284492e-22!GO:0051603;proteolysis involved in cellular protein catabolic process;5.00717669897278e-22!GO:0019941;modification-dependent protein catabolic process;7.53006001029464e-22!GO:0043632;modification-dependent macromolecule catabolic process;7.53006001029464e-22!GO:0006512;ubiquitin cycle;1.09917417885593e-21!GO:0044257;cellular protein catabolic process;2.33384022296089e-21!GO:0044445;cytosolic part;2.38801546464027e-21!GO:0005743;mitochondrial inner membrane;2.38801546464027e-21!GO:0006457;protein folding;2.46053056206688e-21!GO:0005730;nucleolus;1.13196816795029e-20!GO:0015935;small ribosomal subunit;2.53351647429045e-20!GO:0044265;cellular macromolecule catabolic process;7.69258104040298e-20!GO:0051276;chromosome organization and biogenesis;1.54206680645258e-19!GO:0032553;ribonucleotide binding;1.83865319633108e-19!GO:0032555;purine ribonucleotide binding;1.83865319633108e-19!GO:0012505;endomembrane system;2.78919523118984e-19!GO:0043285;biopolymer catabolic process;3.53740280974137e-19!GO:0017076;purine nucleotide binding;5.87266200096605e-19!GO:0006119;oxidative phosphorylation;6.25717219782728e-19!GO:0015934;large ribosomal subunit;1.24842614037038e-18!GO:0008135;translation factor activity, nucleic acid binding;4.64690406539477e-18!GO:0032559;adenyl ribonucleotide binding;1.43914412969181e-17!GO:0005524;ATP binding;1.43930168725347e-17!GO:0006974;response to DNA damage stimulus;1.56688025461597e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.82358151301056e-17!GO:0016462;pyrophosphatase activity;2.04214280350812e-17!GO:0031980;mitochondrial lumen;2.17824191462688e-17!GO:0005759;mitochondrial matrix;2.17824191462688e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;2.19753089429252e-17!GO:0005694;chromosome;3.26508742064215e-17!GO:0017111;nucleoside-triphosphatase activity;4.73888675323307e-17!GO:0030554;adenyl nucleotide binding;7.08024728010451e-17!GO:0043412;biopolymer modification;1.35109234245986e-16!GO:0008134;transcription factor binding;1.38923907430518e-16!GO:0030163;protein catabolic process;1.81364112697016e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;2.12114575089912e-16!GO:0044455;mitochondrial membrane part;4.23112161522521e-16!GO:0006323;DNA packaging;1.16094367927248e-15!GO:0009057;macromolecule catabolic process;1.36534372055439e-15!GO:0042254;ribosome biogenesis and assembly;2.58263607116606e-15!GO:0022402;cell cycle process;2.78446987056414e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.950433041076e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;8.8417348446042e-15!GO:0000375;RNA splicing, via transesterification reactions;8.8417348446042e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.8417348446042e-15!GO:0003743;translation initiation factor activity;8.85754964042015e-15!GO:0006281;DNA repair;1.09388819888247e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.15231714115065e-14!GO:0044427;chromosomal part;1.16732099271708e-14!GO:0005783;endoplasmic reticulum;2.67092226653391e-14!GO:0006366;transcription from RNA polymerase II promoter;2.91224935902884e-14!GO:0051082;unfolded protein binding;3.56873894492674e-14!GO:0006464;protein modification process;4.42368513262178e-14!GO:0016604;nuclear body;4.84313481881451e-14!GO:0006413;translational initiation;5.04581170855895e-14!GO:0048770;pigment granule;7.72960618716045e-14!GO:0042470;melanosome;7.72960618716045e-14!GO:0006605;protein targeting;1.12613368260314e-13!GO:0048193;Golgi vesicle transport;2.41303679682309e-13!GO:0005746;mitochondrial respiratory chain;3.57480063721969e-13!GO:0044432;endoplasmic reticulum part;4.35384549824083e-13!GO:0004386;helicase activity;4.97504468991715e-13!GO:0005635;nuclear envelope;5.82311180153266e-13!GO:0044248;cellular catabolic process;7.22398523771147e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.34789638209684e-13!GO:0016887;ATPase activity;1.01070628097339e-12!GO:0000278;mitotic cell cycle;1.38892543749823e-12!GO:0005761;mitochondrial ribosome;1.55647392493198e-12!GO:0000313;organellar ribosome;1.55647392493198e-12!GO:0043687;post-translational protein modification;1.57166538903977e-12!GO:0031965;nuclear membrane;2.0824380503584e-12!GO:0016607;nuclear speck;2.36803180286078e-12!GO:0019222;regulation of metabolic process;2.68491480922803e-12!GO:0044453;nuclear membrane part;3.58185702692813e-12!GO:0006399;tRNA metabolic process;3.62260250686017e-12!GO:0003712;transcription cofactor activity;3.9275587850509e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.48216150576587e-12!GO:0042623;ATPase activity, coupled;5.02838406014893e-12!GO:0016568;chromatin modification;5.17177827769485e-12!GO:0006446;regulation of translational initiation;5.46915740251033e-12!GO:0050136;NADH dehydrogenase (quinone) activity;6.32223913340285e-12!GO:0003954;NADH dehydrogenase activity;6.32223913340285e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.32223913340285e-12!GO:0051186;cofactor metabolic process;6.74698895114621e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.5290295320199e-11!GO:0008639;small protein conjugating enzyme activity;1.68977835986148e-11!GO:0050657;nucleic acid transport;2.06709797452607e-11!GO:0051236;establishment of RNA localization;2.06709797452607e-11!GO:0050658;RNA transport;2.06709797452607e-11!GO:0006403;RNA localization;2.15960489788863e-11!GO:0016192;vesicle-mediated transport;2.46605379858016e-11!GO:0051301;cell division;2.56655687894907e-11!GO:0005643;nuclear pore;3.53541428649552e-11!GO:0004842;ubiquitin-protein ligase activity;3.81772512376354e-11!GO:0015630;microtubule cytoskeleton;4.62033318059392e-11!GO:0006350;transcription;5.44444087356884e-11!GO:0008026;ATP-dependent helicase activity;5.62343040459492e-11!GO:0006260;DNA replication;7.25989692965259e-11!GO:0005794;Golgi apparatus;9.71030011288359e-11!GO:0009719;response to endogenous stimulus;1.0562279196534e-10!GO:0019787;small conjugating protein ligase activity;1.40805067579315e-10!GO:0006913;nucleocytoplasmic transport;1.41068195994652e-10!GO:0016881;acid-amino acid ligase activity;2.0231845825959e-10!GO:0042775;organelle ATP synthesis coupled electron transport;2.31539335395301e-10!GO:0042773;ATP synthesis coupled electron transport;2.31539335395301e-10!GO:0051169;nuclear transport;3.39998395582529e-10!GO:0031323;regulation of cellular metabolic process;3.52604465549298e-10!GO:0006732;coenzyme metabolic process;3.5427224826096e-10!GO:0022403;cell cycle phase;5.30854468816066e-10!GO:0030964;NADH dehydrogenase complex (quinone);5.97728401115412e-10!GO:0045271;respiratory chain complex I;5.97728401115412e-10!GO:0005747;mitochondrial respiratory chain complex I;5.97728401115412e-10!GO:0065002;intracellular protein transport across a membrane;6.00498094020465e-10!GO:0000087;M phase of mitotic cell cycle;6.09408533845932e-10!GO:0008565;protein transporter activity;6.13289246837045e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.46919117904584e-10!GO:0000785;chromatin;1.09934191523716e-09!GO:0005667;transcription factor complex;1.25718199568907e-09!GO:0007067;mitosis;1.31820199996364e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.33605698132831e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.33605698132831e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.33605698132831e-09!GO:0065004;protein-DNA complex assembly;1.33605698132831e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.35866987275772e-09!GO:0050794;regulation of cellular process;1.59526389240699e-09!GO:0010468;regulation of gene expression;1.63788034146695e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.6485343884292e-09!GO:0016072;rRNA metabolic process;1.93640496174245e-09!GO:0051028;mRNA transport;2.10770182936706e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.21302693529499e-09!GO:0005789;endoplasmic reticulum membrane;2.44541068304075e-09!GO:0006364;rRNA processing;2.85851679550388e-09!GO:0043038;amino acid activation;4.17427996918789e-09!GO:0006418;tRNA aminoacylation for protein translation;4.17427996918789e-09!GO:0043039;tRNA aminoacylation;4.17427996918789e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.6885721142424e-09!GO:0006333;chromatin assembly or disassembly;5.42669661599942e-09!GO:0032774;RNA biosynthetic process;6.8054701683925e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.94636494964049e-09!GO:0006351;transcription, DNA-dependent;8.17189777564697e-09!GO:0000279;M phase;8.35464823840403e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.23144258176961e-08!GO:0046930;pore complex;1.31581047563667e-08!GO:0032446;protein modification by small protein conjugation;1.43468893389704e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.86282531780595e-08!GO:0016567;protein ubiquitination;1.98408593795584e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.46370833256369e-08!GO:0006163;purine nucleotide metabolic process;2.48335111605134e-08!GO:0009259;ribonucleotide metabolic process;3.08259796290502e-08!GO:0005793;ER-Golgi intermediate compartment;3.93962750359353e-08!GO:0006164;purine nucleotide biosynthetic process;4.50712815724929e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.7161170445862e-08!GO:0009055;electron carrier activity;5.80785083263757e-08!GO:0015986;ATP synthesis coupled proton transport;6.06374059319022e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.06374059319022e-08!GO:0006461;protein complex assembly;7.54057072998917e-08!GO:0005768;endosome;8.71429181574106e-08!GO:0000151;ubiquitin ligase complex;8.72252498885969e-08!GO:0000245;spliceosome assembly;9.93825992841673e-08!GO:0009260;ribonucleotide biosynthetic process;1.00915453152859e-07!GO:0009150;purine ribonucleotide metabolic process;1.20463499713874e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.28871662629532e-07!GO:0045449;regulation of transcription;1.74939138521882e-07!GO:0007005;mitochondrion organization and biogenesis;1.971008964541e-07!GO:0043566;structure-specific DNA binding;2.01933746520704e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.1854108806967e-07!GO:0006888;ER to Golgi vesicle-mediated transport;2.7567131493636e-07!GO:0009060;aerobic respiration;2.7650796817002e-07!GO:0019829;cation-transporting ATPase activity;2.7650796817002e-07!GO:0016564;transcription repressor activity;2.77366581408541e-07!GO:0005813;centrosome;2.92231381447764e-07!GO:0051188;cofactor biosynthetic process;2.99303299824983e-07!GO:0009141;nucleoside triphosphate metabolic process;3.27904124551454e-07!GO:0017038;protein import;3.77496128595787e-07!GO:0016740;transferase activity;3.95620351053149e-07!GO:0045333;cellular respiration;4.18401153149064e-07!GO:0051726;regulation of cell cycle;5.52575169768186e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.52798963885587e-07!GO:0009142;nucleoside triphosphate biosynthetic process;6.17980242656278e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.17980242656278e-07!GO:0000074;regulation of progression through cell cycle;7.48876384130981e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.68303054190172e-07!GO:0006754;ATP biosynthetic process;9.31790371645348e-07!GO:0006753;nucleoside phosphate metabolic process;9.31790371645348e-07!GO:0005815;microtubule organizing center;9.41517641760877e-07!GO:0016779;nucleotidyltransferase activity;1.0519675448877e-06!GO:0006355;regulation of transcription, DNA-dependent;1.0519675448877e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.2379097325181e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.2379097325181e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.4923873221454e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.4923873221454e-06!GO:0046034;ATP metabolic process;1.7408341520009e-06!GO:0003677;DNA binding;2.06530328446436e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.37098349079463e-06!GO:0009056;catabolic process;2.42002843085013e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.57019009325966e-06!GO:0003697;single-stranded DNA binding;2.7267899983423e-06!GO:0044431;Golgi apparatus part;2.82452054329264e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.82452054329264e-06!GO:0009108;coenzyme biosynthetic process;2.83619129117908e-06!GO:0006613;cotranslational protein targeting to membrane;3.43970823575035e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.02265760051297e-06!GO:0003724;RNA helicase activity;4.36143650675985e-06!GO:0006915;apoptosis;4.38481366891219e-06!GO:0012501;programmed cell death;4.70961394505747e-06!GO:0048475;coated membrane;5.43177359238166e-06!GO:0030117;membrane coat;5.43177359238166e-06!GO:0051168;nuclear export;7.11189686407763e-06!GO:0003714;transcription corepressor activity;7.54948368599503e-06!GO:0016563;transcription activator activity;8.00377249588297e-06!GO:0003713;transcription coactivator activity;8.09004445786862e-06!GO:0006099;tricarboxylic acid cycle;9.9469131220804e-06!GO:0046356;acetyl-CoA catabolic process;9.9469131220804e-06!GO:0006793;phosphorus metabolic process;9.9513144876152e-06!GO:0006796;phosphate metabolic process;9.9513144876152e-06!GO:0031324;negative regulation of cellular metabolic process;1.01476797069074e-05!GO:0006261;DNA-dependent DNA replication;1.04974670062562e-05!GO:0045259;proton-transporting ATP synthase complex;1.13719189590588e-05!GO:0050789;regulation of biological process;1.19067542292305e-05!GO:0006752;group transfer coenzyme metabolic process;1.32456893206481e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.32648013034023e-05!GO:0045045;secretory pathway;1.44759130430068e-05!GO:0009892;negative regulation of metabolic process;1.48087543247714e-05!GO:0016481;negative regulation of transcription;1.5665294100562e-05!GO:0006334;nucleosome assembly;1.68943177310288e-05!GO:0044440;endosomal part;1.70407205639681e-05!GO:0010008;endosome membrane;1.70407205639681e-05!GO:0030120;vesicle coat;1.74119113109527e-05!GO:0030662;coated vesicle membrane;1.74119113109527e-05!GO:0006084;acetyl-CoA metabolic process;1.74119113109527e-05!GO:0003702;RNA polymerase II transcription factor activity;1.86880212755932e-05!GO:0005874;microtubule;1.97273289361676e-05!GO:0005788;endoplasmic reticulum lumen;1.99695705019852e-05!GO:0006402;mRNA catabolic process;3.00643645758174e-05!GO:0043623;cellular protein complex assembly;3.17016678132614e-05!GO:0003682;chromatin binding;3.54914107247039e-05!GO:0008219;cell death;3.94807610864894e-05!GO:0016265;death;3.94807610864894e-05!GO:0043021;ribonucleoprotein binding;3.9824074957109e-05!GO:0031497;chromatin assembly;4.70715868895469e-05!GO:0016310;phosphorylation;6.12912156559898e-05!GO:0031988;membrane-bound vesicle;6.2752680430044e-05!GO:0000139;Golgi membrane;6.53446781373861e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.82164284005234e-05!GO:0031982;vesicle;6.83951365676641e-05!GO:0003899;DNA-directed RNA polymerase activity;7.14979118776769e-05!GO:0051170;nuclear import;7.6997329780779e-05!GO:0005819;spindle;7.90065246089532e-05!GO:0005798;Golgi-associated vesicle;8.44069453201826e-05!GO:0000314;organellar small ribosomal subunit;8.65975863298816e-05!GO:0005763;mitochondrial small ribosomal subunit;8.65975863298816e-05!GO:0006612;protein targeting to membrane;8.71699385958657e-05!GO:0009109;coenzyme catabolic process;8.74973698888945e-05!GO:0004674;protein serine/threonine kinase activity;8.80614308673659e-05!GO:0051246;regulation of protein metabolic process;9.71503399031304e-05!GO:0016859;cis-trans isomerase activity;9.77336975291901e-05!GO:0009117;nucleotide metabolic process;9.8586058855681e-05!GO:0008654;phospholipid biosynthetic process;0.000100455440211956!GO:0000049;tRNA binding;0.000114682207909541!GO:0008033;tRNA processing;0.000116493581154966!GO:0031072;heat shock protein binding;0.000117571949787836!GO:0006401;RNA catabolic process;0.000117967979300029!GO:0016023;cytoplasmic membrane-bound vesicle;0.000118855339820214!GO:0006352;transcription initiation;0.000122610087800631!GO:0051789;response to protein stimulus;0.000123710509699834!GO:0006986;response to unfolded protein;0.000123710509699834!GO:0003729;mRNA binding;0.000126555901351825!GO:0008186;RNA-dependent ATPase activity;0.000146806543429346!GO:0005770;late endosome;0.000152577663535199!GO:0031410;cytoplasmic vesicle;0.000166351632277955!GO:0006606;protein import into nucleus;0.000174151804186557!GO:0004576;oligosaccharyl transferase activity;0.000191425410436857!GO:0044452;nucleolar part;0.000210527259138085!GO:0005769;early endosome;0.000214053496922735!GO:0016853;isomerase activity;0.000219161692382802!GO:0030867;rough endoplasmic reticulum membrane;0.000231722554174716!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000235340596268345!GO:0051187;cofactor catabolic process;0.000248474954105468!GO:0003690;double-stranded DNA binding;0.000256605845587209!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000264777930069097!GO:0008250;oligosaccharyl transferase complex;0.000267946417996352!GO:0019783;small conjugating protein-specific protease activity;0.000276381427398388!GO:0007017;microtubule-based process;0.000280826429084412!GO:0051427;hormone receptor binding;0.000299078915602423!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000343673294554594!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.000380571727310598!GO:0007051;spindle organization and biogenesis;0.000395256037845273!GO:0045454;cell redox homeostasis;0.000397374857796925!GO:0000775;chromosome, pericentric region;0.000399984675501151!GO:0004843;ubiquitin-specific protease activity;0.000423634971445099!GO:0004004;ATP-dependent RNA helicase activity;0.000448758902515444!GO:0006916;anti-apoptosis;0.000460620744635143!GO:0016251;general RNA polymerase II transcription factor activity;0.000485615182826197!GO:0033116;ER-Golgi intermediate compartment membrane;0.000493933076607937!GO:0048523;negative regulation of cellular process;0.000552851799444357!GO:0035257;nuclear hormone receptor binding;0.000560154546838608!GO:0016363;nuclear matrix;0.000568447888091246!GO:0005762;mitochondrial large ribosomal subunit;0.000606480610574052!GO:0000315;organellar large ribosomal subunit;0.000606480610574052!GO:0004221;ubiquitin thiolesterase activity;0.000629058229987844!GO:0043069;negative regulation of programmed cell death;0.000638807919773586!GO:0015631;tubulin binding;0.000641355978149679!GO:0006383;transcription from RNA polymerase III promoter;0.000663386956152949!GO:0043066;negative regulation of apoptosis;0.000684809092840192!GO:0005657;replication fork;0.000702663459452341!GO:0005525;GTP binding;0.000721510177361933!GO:0006302;double-strand break repair;0.000755108453181233!GO:0006338;chromatin remodeling;0.000833858486708796!GO:0006818;hydrogen transport;0.000838698951345298!GO:0045892;negative regulation of transcription, DNA-dependent;0.000844575109819039!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000875014352727277!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000876989729888649!GO:0006839;mitochondrial transport;0.00094288138992057!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00100287919822518!GO:0000059;protein import into nucleus, docking;0.00102370562828353!GO:0016741;transferase activity, transferring one-carbon groups;0.00105379485260007!GO:0015992;proton transport;0.00106813960420754!GO:0048500;signal recognition particle;0.00114427350559424!GO:0019899;enzyme binding;0.00119534984922894!GO:0030880;RNA polymerase complex;0.00120981219890671!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00121133874028815!GO:0005839;proteasome core complex (sensu Eukaryota);0.00122857730014328!GO:0008168;methyltransferase activity;0.00128089818740621!GO:0051252;regulation of RNA metabolic process;0.00141063612959801!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0014351618864323!GO:0042981;regulation of apoptosis;0.00144319311353166!GO:0051920;peroxiredoxin activity;0.00144589076369746!GO:0043681;protein import into mitochondrion;0.00145716420070973!GO:0046474;glycerophospholipid biosynthetic process;0.00149944047247407!GO:0051052;regulation of DNA metabolic process;0.00156651167066476!GO:0016790;thiolester hydrolase activity;0.00157523481343775!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0016915415477415!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0016915415477415!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0016915415477415!GO:0006414;translational elongation;0.00173776974108339!GO:0031252;leading edge;0.00173776974108339!GO:0007006;mitochondrial membrane organization and biogenesis;0.00182128940604016!GO:0045786;negative regulation of progression through cell cycle;0.00183830647828915!GO:0051329;interphase of mitotic cell cycle;0.00191813341864136!GO:0022890;inorganic cation transmembrane transporter activity;0.00196085466023004!GO:0003924;GTPase activity;0.00198111393140119!GO:0005048;signal sequence binding;0.00198503893827045!GO:0043067;regulation of programmed cell death;0.00201670583305881!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00205286417774035!GO:0000428;DNA-directed RNA polymerase complex;0.00205286417774035!GO:0006891;intra-Golgi vesicle-mediated transport;0.00205556701071847!GO:0016787;hydrolase activity;0.002077487225774!GO:0007052;mitotic spindle organization and biogenesis;0.00213867472306628!GO:0000776;kinetochore;0.00220438931973099!GO:0004298;threonine endopeptidase activity;0.00220518273096112!GO:0046489;phosphoinositide biosynthetic process;0.00225640864186994!GO:0006405;RNA export from nucleus;0.00225640864186994!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00241813341016754!GO:0015399;primary active transmembrane transporter activity;0.00241813341016754!GO:0015980;energy derivation by oxidation of organic compounds;0.00241813341016754!GO:0006626;protein targeting to mitochondrion;0.00243152808426216!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00279913917898567!GO:0008022;protein C-terminus binding;0.00282755022091968!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00286076883311519!GO:0045047;protein targeting to ER;0.00286076883311519!GO:0008312;7S RNA binding;0.00288620399325115!GO:0019843;rRNA binding;0.00297284544891859!GO:0007010;cytoskeleton organization and biogenesis;0.00304015478416287!GO:0006611;protein export from nucleus;0.00312996603166134!GO:0018196;peptidyl-asparagine modification;0.00312996603166134!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00312996603166134!GO:0032561;guanyl ribonucleotide binding;0.00326558488878163!GO:0019001;guanyl nucleotide binding;0.00326558488878163!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00332838894372938!GO:0043488;regulation of mRNA stability;0.00333531092613825!GO:0043487;regulation of RNA stability;0.00333531092613825!GO:0006984;ER-nuclear signaling pathway;0.00334546078974152!GO:0032940;secretion by cell;0.00351844417651973!GO:0000096;sulfur amino acid metabolic process;0.00358704882269813!GO:0008270;zinc ion binding;0.00370952699764261!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00377212245625482!GO:0042802;identical protein binding;0.00392226412728409!GO:0051087;chaperone binding;0.0040061909049773!GO:0003711;transcription elongation regulator activity;0.0041644515262412!GO:0005684;U2-dependent spliceosome;0.00418790201930325!GO:0005773;vacuole;0.00422508126346168!GO:0005669;transcription factor TFIID complex;0.00448791006571283!GO:0003684;damaged DNA binding;0.00450991431291735!GO:0030133;transport vesicle;0.00459675865888474!GO:0030134;ER to Golgi transport vesicle;0.00460695592766982!GO:0048487;beta-tubulin binding;0.00466614238143249!GO:0006607;NLS-bearing substrate import into nucleus;0.00491321000034197!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00491996147224691!GO:0032508;DNA duplex unwinding;0.00509475980631894!GO:0032392;DNA geometric change;0.00509475980631894!GO:0000118;histone deacetylase complex;0.00521463153166034!GO:0009165;nucleotide biosynthetic process;0.00551931223338841!GO:0008234;cysteine-type peptidase activity;0.00554956958968788!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00554956958968788!GO:0000786;nucleosome;0.00554956958968788!GO:0016272;prefoldin complex;0.00569337009510356!GO:0019867;outer membrane;0.00571657461844691!GO:0008276;protein methyltransferase activity;0.00584673214730693!GO:0048471;perinuclear region of cytoplasm;0.00620218325021322!GO:0005791;rough endoplasmic reticulum;0.00623071096168084!GO:0051325;interphase;0.00654328245519244!GO:0008017;microtubule binding;0.0066758852325618!GO:0030127;COPII vesicle coat;0.00677419016102305!GO:0012507;ER to Golgi transport vesicle membrane;0.00677419016102305!GO:0016584;nucleosome positioning;0.00680494001235219!GO:0045893;positive regulation of transcription, DNA-dependent;0.00680494001235219!GO:0031968;organelle outer membrane;0.00691747031431652!GO:0005741;mitochondrial outer membrane;0.00693992758944917!GO:0043022;ribosome binding;0.00723659925117602!GO:0045941;positive regulation of transcription;0.00740385011946442!GO:0005637;nuclear inner membrane;0.00758830372409091!GO:0030658;transport vesicle membrane;0.0076814956856784!GO:0031970;organelle envelope lumen;0.00772415330392056!GO:0005885;Arp2/3 protein complex;0.00773718105946359!GO:0030521;androgen receptor signaling pathway;0.00774476517573005!GO:0008094;DNA-dependent ATPase activity;0.0078567302885028!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00797106335739084!GO:0006650;glycerophospholipid metabolic process;0.00804677522758437!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0084528845219228!GO:0006376;mRNA splice site selection;0.00894409297750183!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00894409297750183!GO:0030176;integral to endoplasmic reticulum membrane;0.00895764882081487!GO:0003678;DNA helicase activity;0.00901609100055041!GO:0030118;clathrin coat;0.00903628526632976!GO:0032200;telomere organization and biogenesis;0.00939113014546418!GO:0000723;telomere maintenance;0.00939113014546418!GO:0000339;RNA cap binding;0.00969768983365333!GO:0009451;RNA modification;0.0097731965652497!GO:0008652;amino acid biosynthetic process;0.0098761980385305!GO:0022406;membrane docking;0.0101216447744553!GO:0048278;vesicle docking;0.0101216447744553!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0101349960382965!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0101349960382965!GO:0030663;COPI coated vesicle membrane;0.0101836911496173!GO:0030126;COPI vesicle coat;0.0101836911496173!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0102356834723532!GO:0006144;purine base metabolic process;0.0104551193111559!GO:0016197;endosome transport;0.0105254316420866!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0106002958506194!GO:0048519;negative regulation of biological process;0.0109571179244197!GO:0005832;chaperonin-containing T-complex;0.0110055476565014!GO:0016579;protein deubiquitination;0.0111774432068662!GO:0043414;biopolymer methylation;0.0114419974493835!GO:0035258;steroid hormone receptor binding;0.0114613402279885!GO:0008097;5S rRNA binding;0.0117529799166863!GO:0004527;exonuclease activity;0.011992890238193!GO:0000922;spindle pole;0.0121735341190305!GO:0030968;unfolded protein response;0.0124302045737798!GO:0000075;cell cycle checkpoint;0.0125796318189009!GO:0006284;base-excision repair;0.0128012081423137!GO:0006268;DNA unwinding during replication;0.0128494742144126!GO:0030384;phosphoinositide metabolic process;0.0128784218032311!GO:0006506;GPI anchor biosynthetic process;0.0129342295183252!GO:0006595;polyamine metabolic process;0.0131380166036827!GO:0046467;membrane lipid biosynthetic process;0.0132579868987379!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0133712080387685!GO:0006904;vesicle docking during exocytosis;0.0139400166420139!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0142379332795238!GO:0043492;ATPase activity, coupled to movement of substances;0.0142778268186187!GO:0008139;nuclear localization sequence binding;0.0143047730948611!GO:0016491;oxidoreductase activity;0.01482778494617!GO:0030518;steroid hormone receptor signaling pathway;0.0150576630156165!GO:0030660;Golgi-associated vesicle membrane;0.0150576630156165!GO:0040029;regulation of gene expression, epigenetic;0.015492386734972!GO:0006505;GPI anchor metabolic process;0.0155405425266332!GO:0008092;cytoskeletal protein binding;0.0160363638748295!GO:0042393;histone binding;0.0161402854441411!GO:0005665;DNA-directed RNA polymerase II, core complex;0.016759496453923!GO:0000228;nuclear chromosome;0.0168302114165869!GO:0007004;telomere maintenance via telomerase;0.0169261233684736!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0169856060816833!GO:0045603;positive regulation of endothelial cell differentiation;0.0170976107528442!GO:0051128;regulation of cellular component organization and biogenesis;0.0171171665811587!GO:0031124;mRNA 3'-end processing;0.0171547690245443!GO:0006091;generation of precursor metabolites and energy;0.0172010257201245!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0173743897881716!GO:0006400;tRNA modification;0.0175231249343146!GO:0007264;small GTPase mediated signal transduction;0.0175332435509834!GO:0005758;mitochondrial intermembrane space;0.0176016325753495!GO:0000287;magnesium ion binding;0.01766178923592!GO:0003746;translation elongation factor activity;0.0177172507707864!GO:0003756;protein disulfide isomerase activity;0.0179026400277222!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0179026400277222!GO:0006497;protein amino acid lipidation;0.0180133107719318!GO:0006310;DNA recombination;0.0180943866914739!GO:0008601;protein phosphatase type 2A regulator activity;0.0182634926450153!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0185692518727694!GO:0046983;protein dimerization activity;0.0190582711413123!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0192870294333843!GO:0016301;kinase activity;0.0195670908711298!GO:0032259;methylation;0.0199468953320256!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0210436874421977!GO:0046483;heterocycle metabolic process;0.0210436874421977!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0213364298946987!GO:0015002;heme-copper terminal oxidase activity;0.0213364298946987!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0213364298946987!GO:0004129;cytochrome-c oxidase activity;0.0213364298946987!GO:0050662;coenzyme binding;0.0214206438886717!GO:0030433;ER-associated protein catabolic process;0.0214206438886717!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0214206438886717!GO:0007059;chromosome segregation;0.0214206438886717!GO:0045815;positive regulation of gene expression, epigenetic;0.0215132520654888!GO:0030027;lamellipodium;0.0218263940445331!GO:0005875;microtubule associated complex;0.0220312964611328!GO:0008287;protein serine/threonine phosphatase complex;0.0228726508107852!GO:0000323;lytic vacuole;0.0228726508107852!GO:0005764;lysosome;0.0228726508107852!GO:0008408;3'-5' exonuclease activity;0.0231681229034907!GO:0065007;biological regulation;0.0235720167031131!GO:0030137;COPI-coated vesicle;0.0237773595270684!GO:0006892;post-Golgi vesicle-mediated transport;0.0239001049935453!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0239977609032912!GO:0051287;NAD binding;0.0242934318249411!GO:0006740;NADPH regeneration;0.0247209273951989!GO:0006098;pentose-phosphate shunt;0.0247209273951989!GO:0008637;apoptotic mitochondrial changes;0.0254786404998985!GO:0003727;single-stranded RNA binding;0.0254786404998985!GO:0009112;nucleobase metabolic process;0.0255975827011286!GO:0006289;nucleotide-excision repair;0.0257995595551011!GO:0046914;transition metal ion binding;0.0258278882071345!GO:0043624;cellular protein complex disassembly;0.0260996855156764!GO:0005844;polysome;0.026517254909085!GO:0019752;carboxylic acid metabolic process;0.0268504375092874!GO:0009303;rRNA transcription;0.027760763035955!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0284707344315466!GO:0004532;exoribonuclease activity;0.0288239201608575!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0288239201608575!GO:0005784;translocon complex;0.0289816428504521!GO:0031902;late endosome membrane;0.0296972759422954!GO:0032984;macromolecular complex disassembly;0.0297006114147732!GO:0000209;protein polyubiquitination;0.0298392792475685!GO:0006082;organic acid metabolic process;0.0301780028682236!GO:0006378;mRNA polyadenylation;0.0306096612899924!GO:0006278;RNA-dependent DNA replication;0.0307146196123198!GO:0008180;signalosome;0.0309974003495319!GO:0035267;NuA4 histone acetyltransferase complex;0.0321541069356055!GO:0050811;GABA receptor binding;0.0339957186622273!GO:0009116;nucleoside metabolic process;0.0343719243980153!GO:0030503;regulation of cell redox homeostasis;0.034443770874508!GO:0000159;protein phosphatase type 2A complex;0.035488418974219!GO:0009081;branched chain family amino acid metabolic process;0.035549057541426!GO:0044454;nuclear chromosome part;0.035549057541426!GO:0006860;extracellular amino acid transport;0.0357690846583997!GO:0012506;vesicle membrane;0.0357690846583997!GO:0007569;cell aging;0.0368692570088488!GO:0006520;amino acid metabolic process;0.0368692570088488!GO:0003725;double-stranded RNA binding;0.036914990868779!GO:0016018;cyclosporin A binding;0.0370245862994475!GO:0000726;non-recombinational repair;0.0373058652894927!GO:0032906;transforming growth factor-beta2 production;0.0373427448982009!GO:0032909;regulation of transforming growth factor-beta2 production;0.0373427448982009!GO:0005905;coated pit;0.0373427448982009!GO:0043596;nuclear replication fork;0.0373487048644396!GO:0005876;spindle microtubule;0.0380399344487745!GO:0004518;nuclease activity;0.039722998208616!GO:0000152;nuclear ubiquitin ligase complex;0.0397810694516833!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0402959588115791!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0411291932626999!GO:0000792;heterochromatin;0.0411908873745277!GO:0008632;apoptotic program;0.0415638930146068!GO:0043189;H4/H2A histone acetyltransferase complex;0.0422706425305869!GO:0046982;protein heterodimerization activity;0.0422987197610724!GO:0000738;DNA catabolic process, exonucleolytic;0.0423320958352679!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0423320958352679!GO:0030119;AP-type membrane coat adaptor complex;0.0424025067840478!GO:0006301;postreplication repair;0.0426131532106021!GO:0044433;cytoplasmic vesicle part;0.0431755657452992!GO:0043130;ubiquitin binding;0.043534700696304!GO:0032182;small conjugating protein binding;0.043534700696304!GO:0042158;lipoprotein biosynthetic process;0.0437168267684694!GO:0031123;RNA 3'-end processing;0.0444712148387779!GO:0008536;Ran GTPase binding;0.0448620781383612!GO:0007093;mitotic cell cycle checkpoint;0.0448714998414692!GO:0043241;protein complex disassembly;0.0453518277884005!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0455224887245981!GO:0065009;regulation of a molecular function;0.0475508383302806!GO:0000781;chromosome, telomeric region;0.0476188742746314!GO:0006672;ceramide metabolic process;0.0493048265850183!GO:0005869;dynactin complex;0.0495221293760312!GO:0031625;ubiquitin protein ligase binding;0.0495407758906947!GO:0030036;actin cytoskeleton organization and biogenesis;0.0495554208480988!GO:0031371;ubiquitin conjugating enzyme complex;0.0497671960636814
|sample_id=10414
|sample_note=machine failed, remainder reloaded, low amount
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=sinus
|top_motifs=LEF1_TCF7_TCF7L1,2:3.6878587106;SNAI1..3:2.18253750219;ZEB1:2.18048013125;LMO2:1.97565533715;FOXN1:1.87286132187;ELK1,4_GABP{A,B1}:1.72573251821;bHLH_family:1.71002556975;SOX2:1.44863769332;NRF1:1.44547320478;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.36374674548;VSX1,2:1.30352883814;RORA:1.27182096818;NKX6-1,2:1.27069813054;AHR_ARNT_ARNT2:1.21005165098;FOX{F1,F2,J1}:1.18630915443;ZNF143:1.17264258923;RFX1:1.14821171191;MYOD1:1.12891002328;RFX2..5_RFXANK_RFXAP:1.10926440161;NFIX:1.08286102539;SOX17:1.07432865147;NFY{A,B,C}:1.06901605083;FOXO1,3,4:1.06552353333;ATF4:1.06094498768;PAX8:1.02628659123;TFDP1:1.01743726695;HIF1A:1.01682400743;AIRE:1.0089332571;ADNP_IRX_SIX_ZHX:0.976385101819;HAND1,2:0.958641884623;FOX{I1,J2}:0.893096141476;XBP1:0.890119502128;NKX2-3_NKX2-5:0.870353498503;LHX3,4:0.859114348449;SOX{8,9,10}:0.850015946345;TFAP2B:0.80370800121;SP1:0.803281182908;PITX1..3:0.797762752719;GFI1:0.79079102302;T:0.767847641088;NKX2-1,4:0.69704654423;TFAP2{A,C}:0.693201984022;ZFP161:0.525457560457;BREu{core}:0.512350211546;NANOG:0.508360892485;XCPE1{core}:0.501564809843;FOXA2:0.49643226018;FOXP1:0.493548444346;PRRX1,2:0.474270958716;MED-1{core}:0.47178059273;MYB:0.45589992041;CRX:0.453317377709;BPTF:0.430583311259;ATF6:0.418559142806;SREBF1,2:0.410110650307;FOX{D1,D2}:0.402783844296;ATF5_CREB3:0.391585222327;E2F1..5:0.387184945735;NKX3-2:0.37990053445;MTE{core}:0.33051214499;RBPJ:0.324907024871;CDC5L:0.317028171493;ALX1:0.316152220827;STAT1,3:0.283452900195;ZBTB16:0.269439784841;TEF:0.266661629811;PATZ1:0.264573582689;NR6A1:0.213611340165;CREB1:0.166180970107;NFE2:0.161126775692;CUX2:0.15771583549;OCT4_SOX2{dimer}:0.147132494857;ATF2:0.120026854745;CEBPA,B_DDIT3:0.0906787447345;HNF1A:0.0906694818066;NFE2L2:0.0849796030179;CDX1,2,4:0.0832176813991;PBX1:0.0814288576345;HOXA9_MEIS1:0.0660948933103;ARID5B:0.0622929340339;HNF4A_NR2F1,2:0.0593381673777;PAX2:0.0499079750925;EGR1..3:0.0305382895963;POU5F1:0.0243410373573;HIC1:0.00743923779732;YY1:-0.00088247679353;ONECUT1,2:-0.00876050235469;PDX1:-0.0232638924145;STAT5{A,B}:-0.0273064397159;DBP:-0.0417767670659;HLF:-0.0524128524695;NHLH1,2:-0.0711949258452;FOXQ1:-0.0948101747543;TP53:-0.0979707865538;PAX5:-0.106870562482;POU6F1:-0.127835187073;ELF1,2,4:-0.148183210095;GTF2A1,2:-0.153063564399;TOPORS:-0.160205513135;MTF1:-0.179187008324;TGIF1:-0.181327243767;HOX{A4,D4}:-0.181533090017;FOXM1:-0.188297918003;JUN:-0.197891488788;GTF2I:-0.220028161906;REST:-0.225349390074;MEF2{A,B,C,D}:-0.225950203667;FOSL2:-0.227272703333;BACH2:-0.228038626654;HOX{A6,A7,B6,B7}:-0.231952703637;GFI1B:-0.233331817517;POU2F1..3:-0.240521578879;MYFfamily:-0.243442900346;POU1F1:-0.243511187221;TBX4,5:-0.275626399476;FOXD3:-0.286118011851;NKX2-2,8:-0.29939519102;FOS_FOS{B,L1}_JUN{B,D}:-0.302133942982;IKZF2:-0.34458505388;SOX5:-0.348264695932;EBF1:-0.348446081527;ZNF423:-0.372377665367;HOX{A5,B5}:-0.376240461687;EVI1:-0.390941449565;TEAD1:-0.416915398028;RREB1:-0.424302624919;HSF1,2:-0.427832950991;PAX4:-0.436518518174;EN1,2:-0.440987849189;MYBL2:-0.448519544894;POU3F1..4:-0.454401535936;MAFB:-0.454571961646;ZNF148:-0.464533476221;GZF1:-0.477413720172;TAL1_TCF{3,4,12}:-0.495487339216;AR:-0.495505283778;NFIL3:-0.502122136386;HBP1_HMGB_SSRP1_UBTF:-0.507783996753;SPIB:-0.508355160839;TLX2:-0.520418431877;NFKB1_REL_RELA:-0.534441493179;PAX3,7:-0.543646446592;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.548028350714;NR5A1,2:-0.578106859981;TLX1..3_NFIC{dimer}:-0.583823035813;ZBTB6:-0.595297625195;IRF7:-0.596180956958;TFCP2:-0.598100531769;DMAP1_NCOR{1,2}_SMARC:-0.59878700406;ZNF384:-0.599491235971;GATA6:-0.645933217049;MZF1:-0.651736429745;ZIC1..3:-0.669841514692;IKZF1:-0.681242619636;NKX3-1:-0.705857644012;ETS1,2:-0.712865222175;TFAP4:-0.716554557867;RUNX1..3:-0.738409271544;EP300:-0.743965767139;ESRRA:-0.774555327136;FOXP3:-0.784521899153;MAZ:-0.795890567491;PAX6:-0.818405296557;FOXL1:-0.826432678981;NANOG{mouse}:-0.84828534274;PAX1,9:-0.848560749894;ZNF238:-0.851863697402;IRF1,2:-0.858839728268;SPI1:-0.898692550784;HES1:-0.924076941622;GATA4:-0.970439927582;ESR1:-0.970920352738;KLF4:-0.987764418057;ALX4:-0.992934462418;PRDM1:-0.995081556438;TBP:-1.00569414754;UFEwm:-1.00977254969;NR3C1:-1.17998306729;SMAD1..7,9:-1.1978927826;GLI1..3:-1.26799685892;HMGA1,2:-1.29037075305;RXRA_VDR{dimer}:-1.31251474039;HMX1:-1.34709449466;GCM1,2:-1.35954788164;NFE2L1:-1.38750079116;NFATC1..3:-1.52918497278;STAT2,4,6:-1.5549991949;NR1H4:-1.60920873795;SRF:-1.94040228797;PPARG:-2.07762447135;SPZ1:-2.10547381404;RXR{A,B,G}:-2.22702375589
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10414-106B9;search_select_hide=table117:FF:10414-106B9
}}
}}

Latest revision as of 13:59, 3 June 2020

Name:maxillary sinus tumor cell line:HSQ-89
Species:Human (Homo sapiens)
Library ID:CNhs10732
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuesinus
dev stage74 year old adult
sexmale
age74
cell typeunclassifiable
cell lineHSQ-89
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005218
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10732 CAGE DRX007927 DRR008799
Accession ID Hg19

Library idBAMCTSS
CNhs10732 DRZ000224 DRZ001609
Accession ID Hg38

Library idBAMCTSS
CNhs10732 DRZ011574 DRZ012959
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10055downloaddownloaddownloaddownload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.215
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0634
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil1.024
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.129
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0694
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0645
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.202
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.0634
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0245
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0749
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0.0317
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10732

Jaspar motifP-value
MA0002.23.23725e-4
MA0003.10.282
MA0004.10.191
MA0006.10.61
MA0007.10.32
MA0009.10.284
MA0014.10.358
MA0017.10.118
MA0018.20.0528
MA0019.10.154
MA0024.10.0189
MA0025.10.00972
MA0027.10.803
MA0028.10.00196
MA0029.10.867
MA0030.10.00535
MA0031.10.098
MA0035.20.571
MA0038.10.00586
MA0039.20.0923
MA0040.10.139
MA0041.10.902
MA0042.10.58
MA0043.10.00119
MA0046.10.471
MA0047.23.78018e-4
MA0048.10.609
MA0050.15.0188e-5
MA0051.10.003
MA0052.10.0679
MA0055.10.413
MA0057.10.727
MA0058.10.173
MA0059.10.717
MA0060.13.3953e-7
MA0061.10.00176
MA0062.24.04956e-4
MA0065.20.0335
MA0066.10.0255
MA0067.10.811
MA0068.10.165
MA0069.10.366
MA0070.10.0907
MA0071.10.645
MA0072.10.891
MA0073.10.396
MA0074.10.145
MA0076.11.42713e-4
MA0077.10.0172
MA0078.10.376
MA0079.20.171
MA0080.21.00388e-7
MA0081.10.027
MA0083.14.29387e-6
MA0084.10.671
MA0087.10.947
MA0088.10.789
MA0090.10.143
MA0091.10.00293
MA0092.10.0678
MA0093.10.135
MA0099.22.46443e-4
MA0100.10.47
MA0101.10.034
MA0102.20.829
MA0103.13.13679e-4
MA0104.20.221
MA0105.11.91468e-6
MA0106.10.807
MA0107.10.0126
MA0108.20.252
MA0111.10.951
MA0112.22.68828e-4
MA0113.10.0553
MA0114.10.465
MA0115.10.357
MA0116.11.12936e-4
MA0117.10.96
MA0119.10.0911
MA0122.10.394
MA0124.10.753
MA0125.10.421
MA0131.10.41
MA0135.10.977
MA0136.10.0015
MA0137.20.111
MA0138.20.235
MA0139.10.666
MA0140.10.183
MA0141.10.13
MA0142.10.395
MA0143.10.127
MA0144.10.101
MA0145.10.444
MA0146.10.596
MA0147.10.255
MA0148.10.00498
MA0149.10.78
MA0150.10.585
MA0152.10.555
MA0153.10.869
MA0154.10.00193
MA0155.10.0615
MA0156.10.245
MA0157.10.635
MA0159.10.503
MA0160.10.345
MA0162.10.156
MA0163.11.2592e-6
MA0164.10.159
MA0258.10.0234
MA0259.10.174



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10732

Novel motifP-value
10.36
100.135
1000.917
1010.709
1020.777
1030.0611
1040.762
1050.936
1060.00109
1070.0187
1080.98
1090.257
110.0486
1100.264
1110.156
1120.0339
1130.25
1140.0357
1150.363
1160.195
1170.507
1180.525
1190.0926
120.764
1200.856
1210.762
1220.676
1230.692
1240.175
1250.44
1260.519
1270.521
1280.033
1290.53
130.843
1300.638
1310.222
1320.661
1330.0718
1340.785
1350.0166
1360.443
1370.306
1380.424
1390.06
140.897
1400.116
1410.654
1420.407
1430.00579
1440.0328
1450.0546
1460.632
1470.171
1480.311
1490.0511
150.263
1500.331
1510.426
1520.297
1530.711
1540.58
1550.375
1560.554
1570.275
1580.897
1590.56
160.198
1600.0607
1610.326
1620.111
1630.797
1640.788
1650.148
1660.329
1670.841
1680.13
1690.0215
170.19
180.163
190.0824
20.412
200.587
210.149
220.184
230.0402
240.882
250.622
260.157
270.233
280.912
290.712
30.107
300.65
310.573
320.00281
330.246
340.283
350.144
360.763
370.25
380.316
390.203
40.944
400.854
410.113
420.405
430.108
440.134
450.525
460.0298
470.538
480.351
490.15
50.231
500.879
510.382
520.293
530.593
540.311
550.516
560.583
570.636
580.345
590.0236
60.519
600.0442
610.683
620.0669
630.222
640.459
650.0306
660.285
670.689
680.00789
690.22
70.728
700.146
710.108
720.388
730.239
740.0794
750.509
760.978
770.0966
780.727
790.06
80.0883
800.115
810.134
820.0478
830.473
840.546
850.00753
860.64
870.832
880.78
890.0683
90.0872
900.448
910.0815
920.037
930.663
940.0755
950.58
960.0677
970.623
980.274
990.544



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10732


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050619 (paranasal sinus cancer)
1357 (maxillary sinus cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000033 (head)
0001764 (maxillary sinus)
0000466 (immaterial anatomical entity)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0001825 (paranasal sinus)
0000464 (anatomical space)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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