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{{f5samples
{{f5samples
|id=FF:10774-110F9
|DRA_sample_Accession=CAGE@SAMD00005487
|name=neuroectodermal tumor  cell line:TASK1
|accession_numbers=CAGE;DRX007966;DRR008838;DRZ000263;DRZ001648;DRZ011613;DRZ012998
|sample_id=10774
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000479,UBERON:0002346,UBERON:0004121,UBERON:0000061,UBERON:0000465,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0001062,UBERON:0010316,UBERON:0005291,UBERON:0010317
|rna_tube_id=110F9
|rna_box=110
|rna_position=F9
|sample_cell_lot=
|sample_cell_catalog=jcrb0139
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=thorax
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=21
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=1.7
|rna_od260/280=2.09
|sample_cell_type=unclassifiable
|sample_cell_line=TASK1
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=neuroectodermal tumor
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=16.43814
|rna_concentration=0.60882
|sample_note=
|profile_hcage=CNhs11866,LSID830,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000468,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0001062,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0005423
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:171,DOID:3095,DOID:2994
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:171,DOID:2994,DOID:3095,DOID:4
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001
|sample_description=
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chrX:25034067..25034088,-!p1@ARX!2.32!210.13!ARX;;chr3:128212033..128212051,-!p1@GATA2!1.87!72.98!GATA2;;chrX:30327504..30327509,-!p1@NR0B1!1.84!67.55!NR0B1;;chr7:19157248..19157268,-!p1@TWIST1!1.78!156.66!TWIST1;;chr20:42574529..42574563,+!p3@TOX2!1.76!56.86!TOX2;;chr14:57277178..57277203,-!p1@OTX2!1.73!52.79!OTX2;;chr6:50786591..50786614,+!p1@TFAP2B!1.72!51.43!TFAP2B;;chr14:76842457..76842494,+!p1@ESRRB!1.60!38.36!ESRRB;;chr1:25256756..25256774,-!p1@RUNX3!1.51!57.20!RUNX3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.45!27.16!ZBED1;;chr2:5832508..5832524,+!p1@SOX11!1.43!26.14!SOX11;;chr15:57511609..57511651,+!p2@TCF12!1.42!42.09!TCF12;;chr6:50789717..50789729,+!p4@TFAP2B!1.42!25.46!TFAP2B;;chr2:176969228..176969260,+!p1@HOXD11!1.39!23.59!HOXD11;;chr13:100634031..100634045,+!p1@ZIC2!1.38!23.25!ZIC2;;chr3:128206762..128206781,-!p2@GATA2!1.37!135.45!GATA2;;chr2:176957443..176957457,+!p1@HOXD13!1.35!21.39!HOXD13;;chr13:100623375..100623425,-!p1@ZIC5!1.33!20.54!ZIC5;;chr7:121944796..121944814,-!p1@FEZF1!1.31!19.52!FEZF1;;chr1:18957333..18957375,+!p1@PAX7!1.27!17.65!PAX7;;chr6:50786571..50786590,+!p2@TFAP2B!1.26!17.31!TFAP2B;;chr3:181429704..181429722,+!p1@SOX2!1.25!16.97!SOX2;;chr10:131762504..131762555,-!p1@EBF3!1.23!16.12!EBF3;;chr6:50786509..50786527,+!p5@TFAP2B!1.21!15.28!TFAP2B;;chr1:18958008..18958023,+!p2@PAX7!1.19!14.60!PAX7;;chr11:16629369..16629392,-!p5@SOX6!1.18!14.09!SOX6;;chr6:50786547..50786564,+!p3@TFAP2B!1.17!13.92!TFAP2B;;chr14:99738138..99738163,-!p1@BCL11B!1.15!13.24!BCL11B;;chr20:39317868..39317884,-!p1@MAFB!1.12!142.91!MAFB;;chr2:223163706..223163730,-!p1@PAX3!1.12!12.05!PAX3;;chr2:176969179..176969226,+!p2@HOXD11!1.10!11.71!HOXD11;;chr6:50786057..50786069,+!p9@TFAP2B!1.10!11.71!TFAP2B;;chr7:113726357..113726443,+!p1@FOXP2!1.08!19.18!FOXP2;;chr4:299227..299272,-!p1@ZNF732!1.08!11.03!ZNF732;;chr2:66662281..66662308,+!p1@MEIS1!1.07!37.17!MEIS1;;chr2:176972000..176972025,+!p4@HOXD11!1.06!10.52!HOXD11;;chr12:85673977..85674015,+!p1@ALX1!1.04!9.84!ALX1;;chr2:239148671..239148686,-!p1@HES6!1.03!36.15!HES6;;chr20:62680984..62680999,-!p1@SOX18!1.03!12.90!SOX18;;chr19:22817119..22817145,+!p1@ZNF492!1.00!15.11!ZNF492;;chrX:84499081..84499115,+!p2@ZNF711!1.00!13.41!ZNF711;;chrX:84498989..84499003,+!p1@ZNF711!1.00!12.56!ZNF711;;chr14:37131058..37131139,+!p1@PAX9!1.00!9.00!PAX9;;chr2:176969097..176969109,+!p3@HOXD11!0.99!8.83!HOXD11;;chr15:83953397..83953425,-!p1@BNC1!0.98!9.84!BNC1;;chr20:42543441..42543497,+!p1@TOX2!0.95!36.49!TOX2;;chr13:100634004..100634025,+!p2@ZIC2!0.95!7.98!ZIC2;;chr8:128748308..128748324,+!p2@MYC!0.94!221.67!MYC;;chr8:11561684..11561751,+!p1@GATA4!0.94!7.64!GATA4;;chr1:24645832..24645853,+!p1@GRHL3!0.93!7.47!GRHL3;;chr17:38465441..38465481,+!p6@RARA!0.92!9.00!RARA;;chr8:145669791..145669834,-!p1@TONSL!0.91!21.39!TONSL;;chr2:71127699..71127744,+!p1@VAX2!0.91!14.94!VAX2;;chr5:134369905..134369972,-!p1@PITX1!0.91!11.03!PITX1;;chr9:132427883..132427951,+!p2@PRRX2!0.91!7.13!PRRX2;;chr2:219849012..219849065,-!p1@FEV!0.91!7.13!FEV;;chr11:16627528..16627550,-!p7@SOX6!0.90!6.96!SOX6;;chr2:145277640..145277771,-!p1@ZEB2!0.89!96.41!ZEB2;;chr20:32274179..32274213,-!p1@E2F1!0.88!46.34!E2F1;;chr20:42543506..42543549,+!p2@TOX2!0.88!16.63!TOX2;;chr2:113993052..113993097,-!p2@PAX8!0.88!15.45!PAX8;;chr1:18958059..18958081,+!p6@PAX7!0.88!6.62!PAX7;;chr13:100638100..100638115,+!p4@ZIC2!0.88!6.62!ZIC2;;chr19:23433144..23433204,-!p1@ZNF724P!0.87!30.04!ZNF724P;;chr7:121944689..121944705,-!p2@FEZF1!0.87!6.45!FEZF1;;chr8:40755333..40755352,-!p1@ZMAT4!0.87!6.45!ZMAT4;;chr12:85674018..85674039,+!p3@ALX1!0.87!6.45!ALX1;;chr1:153940354..153940395,+!p1@CREB3L4!0.86!26.99!CREB3L4;;chr2:25475120..25475176,-!p2@DNMT3A!0.86!8.66!DNMT3A;;chr2:5832493..5832507,+!p2@SOX11!0.86!6.28!SOX11;;chr10:102891048..102891078,+!p1@TLX1!0.86!6.28!TLX1;;chr7:150974206..150974255,-!p1@SMARCD3!0.85!39.89!SMARCD3;;chr17:46688334..46688385,-!p1@HOXB7!0.85!9.00!HOXB7;;chr17:53342311..53342400,+!p1@HLF!0.85!6.96!HLF;;chr15:57511589..57511608,+!p4@TCF12!0.85!6.11!TCF12;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.85!6.11!PEG3;;chr11:44331576..44331650,-!p1@ALX4!0.85!6.11!ALX4;;chr1:23857698..23857733,-!p1@E2F2!0.84!11.20!E2F2;;chrX:131624056..131624069,-!p2@MBNL3!0.84!8.32!MBNL3;;chr19:24097675..24097699,+!p1@ZNF726!0.83!20.54!ZNF726;;chr15:42749722..42749739,-!p2@ZFP106!0.83!10.86!ZFP106;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.83!8.49!TGIF2;;chr2:176969124..176969155,+!p5@HOXD11!0.82!5.60!HOXD11;;chr11:16629288..16629315,-!p8@SOX6!0.82!5.60!SOX6;;chr12:54348655..54348693,+!p1@HOXC12!0.82!5.60!HOXC12;;chr20:42295745..42295765,+!p1@MYBL2!0.81!96.75!MYBL2;;chr17:46806067..46806097,-!p1@HOXB13!0.81!5.43!HOXB13;;chr17:46806035..46806059,-!p2@HOXB13!0.80!5.26!HOXB13;;chr3:193853927..193853944,+!p1@HES1!0.79!181.95!HES1;;chr14:21994337..21994442,-!p1@SALL2!0.79!15.28!SALL2;;chr10:70320074..70320106,+!p1@TET1!0.79!10.86!TET1;;chr8:86089369..86089408,+!p1@E2F5!0.78!14.60!E2F5;;chr8:86089417..86089440,+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|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=FF:10774-110F9
|fonse_cell_line=FF:10774-110F9
|fonse_cell_line_closure=FF:10774-110F9
|fonse_cell_line_closure=FF:10774-110F9
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
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|rna_box=110
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|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.7
|rna_od260/280=2.09
|rna_position=F9
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|rna_sample_type=total RNA
|rna_tube_id=110F9
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|sample_age=21
|sample_category=cell lines
|sample_cell_catalog=jcrb0139
|sample_cell_line=TASK1
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|sample_cell_type=unclassifiable
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
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|sample_disease=neuroectodermal tumor
|sample_donor(cell lot)=
|sample_ethnicity=J
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.69221636520156e-278!GO:0043227;membrane-bound organelle;1.01495682803368e-256!GO:0043231;intracellular membrane-bound organelle;1.01495682803368e-256!GO:0043226;organelle;1.06025116135389e-243!GO:0043229;intracellular organelle;5.69232513563691e-243!GO:0044422;organelle part;9.74199807510703e-174!GO:0044446;intracellular organelle part;5.53496337428951e-172!GO:0005737;cytoplasm;2.7215212698836e-168!GO:0044444;cytoplasmic part;2.05360093489478e-135!GO:0044237;cellular metabolic process;1.00361180886519e-115!GO:0005634;nucleus;3.34490827069231e-115!GO:0044238;primary metabolic process;2.24680758305717e-113!GO:0032991;macromolecular complex;6.63927126104244e-112!GO:0043170;macromolecule metabolic process;6.62830472809406e-106!GO:0030529;ribonucleoprotein complex;1.65016248053651e-104!GO:0043233;organelle lumen;1.91475972033348e-97!GO:0031974;membrane-enclosed lumen;1.91475972033348e-97!GO:0044428;nuclear part;8.49029607807549e-97!GO:0005739;mitochondrion;4.07255398977284e-90!GO:0003723;RNA binding;1.49568701383718e-85!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.98201230474491e-68!GO:0043283;biopolymer metabolic process;4.50903520584273e-67!GO:0010467;gene expression;3.79879758411055e-65!GO:0006396;RNA processing;5.40998993762735e-64!GO:0005840;ribosome;2.8122507194917e-63!GO:0044429;mitochondrial part;1.08984395644224e-60!GO:0006412;translation;1.41151691951357e-58!GO:0031981;nuclear lumen;6.19857083585975e-58!GO:0031090;organelle membrane;1.84376081348843e-56!GO:0005515;protein binding;4.85531365100587e-56!GO:0031967;organelle envelope;4.28491529736473e-54!GO:0003735;structural constituent of ribosome;5.52193066863316e-54!GO:0031975;envelope;1.24660770409816e-53!GO:0043234;protein complex;2.46348484019413e-53!GO:0044249;cellular biosynthetic process;1.83660612257961e-47!GO:0006259;DNA metabolic process;3.64252574175365e-47!GO:0009058;biosynthetic process;1.04078425691627e-46!GO:0003676;nucleic acid binding;4.19302801582265e-46!GO:0016043;cellular component organization and biogenesis;5.00850833356696e-46!GO:0033279;ribosomal subunit;1.12107837041321e-45!GO:0016071;mRNA metabolic process;1.75185727992986e-45!GO:0033036;macromolecule localization;8.21602545330731e-45!GO:0015031;protein transport;4.51193915996684e-44!GO:0019538;protein metabolic process;9.2053433544596e-44!GO:0009059;macromolecule biosynthetic process;3.02599971724712e-43!GO:0008380;RNA splicing;3.12373406800307e-43!GO:0008104;protein localization;1.02706779172832e-40!GO:0045184;establishment of protein localization;5.02547967080622e-40!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.12278021977327e-39!GO:0006397;mRNA processing;1.51841465624045e-39!GO:0044260;cellular macromolecule metabolic process;4.43800674665383e-39!GO:0065003;macromolecular complex assembly;1.04968708830268e-38!GO:0006996;organelle organization and biogenesis;2.39296362687571e-38!GO:0044267;cellular protein metabolic process;2.47522708509528e-38!GO:0005740;mitochondrial envelope;5.47468921268016e-38!GO:0019866;organelle inner membrane;1.10384875368156e-36!GO:0046907;intracellular transport;2.48461051628493e-36!GO:0031966;mitochondrial membrane;4.39393561580622e-36!GO:0005654;nucleoplasm;4.2786689558897e-35!GO:0043228;non-membrane-bound organelle;5.16501610873496e-34!GO:0043232;intracellular non-membrane-bound organelle;5.16501610873496e-34!GO:0005743;mitochondrial inner membrane;9.96186105323369e-34!GO:0016070;RNA metabolic process;1.28155277290121e-33!GO:0005829;cytosol;2.88704090117805e-33!GO:0022607;cellular component assembly;3.45512525244111e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.18158889933769e-32!GO:0005681;spliceosome;2.16371176188599e-31!GO:0006886;intracellular protein transport;1.23330119112575e-30!GO:0007049;cell cycle;3.47576495153167e-30!GO:0000166;nucleotide binding;2.29551505313126e-29!GO:0031980;mitochondrial lumen;2.79106766949231e-28!GO:0005759;mitochondrial matrix;2.79106766949231e-28!GO:0044451;nucleoplasm part;9.44224225744978e-28!GO:0006974;response to DNA damage stimulus;4.47993882915274e-26!GO:0044445;cytosolic part;6.44219737465197e-26!GO:0006281;DNA repair;1.01213080246313e-24!GO:0044455;mitochondrial membrane part;1.41071441639963e-24!GO:0005694;chromosome;1.69150096505011e-24!GO:0015934;large ribosomal subunit;2.2965525814768e-24!GO:0005730;nucleolus;3.69366819437417e-24!GO:0051649;establishment of cellular localization;5.75983029657413e-24!GO:0006119;oxidative phosphorylation;6.90688127994638e-24!GO:0051641;cellular localization;1.57811843690603e-23!GO:0022402;cell cycle process;5.64773537903558e-23!GO:0015935;small ribosomal subunit;1.68533244482316e-22!GO:0016462;pyrophosphatase activity;5.61769495555113e-22!GO:0006260;DNA replication;8.93737591667297e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.05945391803481e-21!GO:0016874;ligase activity;1.40487043370543e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;1.45733798710858e-21!GO:0022618;protein-RNA complex assembly;4.46185118244841e-21!GO:0051276;chromosome organization and biogenesis;5.73510870142025e-21!GO:0044427;chromosomal part;8.84663304791245e-21!GO:0012505;endomembrane system;1.00386688075508e-20!GO:0000278;mitotic cell cycle;1.10315956096869e-20!GO:0006457;protein folding;1.46400540059988e-20!GO:0017111;nucleoside-triphosphatase activity;1.51131557238602e-20!GO:0017076;purine nucleotide binding;1.81378997271213e-19!GO:0009719;response to endogenous stimulus;3.10499291549961e-19!GO:0042254;ribosome biogenesis and assembly;3.536713400345e-19!GO:0032553;ribonucleotide binding;5.69738035624037e-19!GO:0032555;purine ribonucleotide binding;5.69738035624037e-19!GO:0006512;ubiquitin cycle;2.10607359979102e-18!GO:0051186;cofactor metabolic process;2.95926430595763e-18!GO:0005761;mitochondrial ribosome;2.95926430595763e-18!GO:0000313;organellar ribosome;2.95926430595763e-18!GO:0005746;mitochondrial respiratory chain;2.96342332294231e-18!GO:0030554;adenyl nucleotide binding;6.84818696928238e-18!GO:0005524;ATP binding;7.88676442781428e-18!GO:0022403;cell cycle phase;8.26997298824377e-18!GO:0044265;cellular macromolecule catabolic process;1.44064105357187e-17!GO:0032559;adenyl ribonucleotide binding;1.50627171079283e-17!GO:0008135;translation factor activity, nucleic acid binding;2.41810444203225e-17!GO:0006399;tRNA metabolic process;2.80549664640512e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.07384380327512e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.52854510300301e-17!GO:0000087;M phase of mitotic cell cycle;3.54372219061744e-17!GO:0006605;protein targeting;3.7784888295274e-17!GO:0050136;NADH dehydrogenase (quinone) activity;4.73525768698238e-17!GO:0003954;NADH dehydrogenase activity;4.73525768698238e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.73525768698238e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;6.06763488766058e-17!GO:0007067;mitosis;8.70427719350324e-17!GO:0051301;cell division;1.04469883430696e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.62029462612145e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.88622881758764e-16!GO:0005635;nuclear envelope;2.07385953387485e-16!GO:0019941;modification-dependent protein catabolic process;2.77662818157481e-16!GO:0043632;modification-dependent macromolecule catabolic process;2.77662818157481e-16!GO:0006323;DNA packaging;2.84249998520083e-16!GO:0005783;endoplasmic reticulum;4.07394369760062e-16!GO:0044257;cellular protein catabolic process;4.6312022062949e-16!GO:0031965;nuclear membrane;6.26655592552589e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;7.1990853274273e-16!GO:0000375;RNA splicing, via transesterification reactions;7.1990853274273e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.1990853274273e-16!GO:0044432;endoplasmic reticulum part;1.03664974475698e-15!GO:0016887;ATPase activity;1.1992375675533e-15!GO:0044453;nuclear membrane part;1.23789033863773e-15!GO:0000279;M phase;2.76363819011519e-15!GO:0042623;ATPase activity, coupled;3.16217071408299e-15!GO:0042775;organelle ATP synthesis coupled electron transport;3.49753250897173e-15!GO:0042773;ATP synthesis coupled electron transport;3.49753250897173e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.54566588387038e-15!GO:0043285;biopolymer catabolic process;3.55957719921695e-15!GO:0030964;NADH dehydrogenase complex (quinone);5.75774176598894e-15!GO:0045271;respiratory chain complex I;5.75774176598894e-15!GO:0005747;mitochondrial respiratory chain complex I;5.75774176598894e-15!GO:0044248;cellular catabolic process;1.09798938677224e-14!GO:0009057;macromolecule catabolic process;1.11833168864315e-14!GO:0006732;coenzyme metabolic process;1.34666515256103e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.20509920743915e-14!GO:0008134;transcription factor binding;3.72608828770975e-14!GO:0048770;pigment granule;3.88555801487025e-14!GO:0042470;melanosome;3.88555801487025e-14!GO:0005643;nuclear pore;8.75436700957776e-14!GO:0051082;unfolded protein binding;9.12193776713681e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.06315931001463e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.85412405182478e-13!GO:0004386;helicase activity;2.93136227619602e-13!GO:0030163;protein catabolic process;3.15568907962846e-13!GO:0006413;translational initiation;3.6385680822301e-13!GO:0003743;translation initiation factor activity;5.29339877549044e-13!GO:0006364;rRNA processing;5.35413457718897e-13!GO:0048193;Golgi vesicle transport;5.58350640579991e-13!GO:0016604;nuclear body;6.21396628378215e-13!GO:0006446;regulation of translational initiation;8.7117680746181e-13!GO:0006913;nucleocytoplasmic transport;9.03697752206855e-13!GO:0016072;rRNA metabolic process;1.72400767703867e-12!GO:0051169;nuclear transport;1.72400767703867e-12!GO:0050657;nucleic acid transport;2.7888878151312e-12!GO:0051236;establishment of RNA localization;2.7888878151312e-12!GO:0050658;RNA transport;2.7888878151312e-12!GO:0065002;intracellular protein transport across a membrane;2.8975796106494e-12!GO:0006403;RNA localization;3.57201889458391e-12!GO:0017038;protein import;3.58085211091992e-12!GO:0008565;protein transporter activity;4.06406610567435e-12!GO:0009259;ribonucleotide metabolic process;6.28973855507171e-12!GO:0043412;biopolymer modification;6.50227796395836e-12!GO:0006163;purine nucleotide metabolic process;6.67295755361873e-12!GO:0006333;chromatin assembly or disassembly;9.7703924649153e-12!GO:0051726;regulation of cell cycle;1.01312615807149e-11!GO:0065004;protein-DNA complex assembly;1.06954822260947e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.06954822260947e-11!GO:0004812;aminoacyl-tRNA ligase activity;1.06954822260947e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.06954822260947e-11!GO:0000074;regulation of progression through cell cycle;1.28387042848591e-11!GO:0008026;ATP-dependent helicase activity;1.30956549498859e-11!GO:0043038;amino acid activation;2.96454051408372e-11!GO:0006418;tRNA aminoacylation for protein translation;2.96454051408372e-11!GO:0043039;tRNA aminoacylation;2.96454051408372e-11!GO:0005794;Golgi apparatus;3.2016799152337e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.35907422060369e-11!GO:0006261;DNA-dependent DNA replication;3.46226929656296e-11!GO:0046930;pore complex;3.63920380550365e-11!GO:0005789;endoplasmic reticulum membrane;4.00752556362011e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.57449691234729e-11!GO:0006164;purine nucleotide biosynthetic process;7.38534691950713e-11!GO:0000785;chromatin;9.16039113434733e-11!GO:0006461;protein complex assembly;9.56704020473784e-11!GO:0016607;nuclear speck;1.09926145604798e-10!GO:0009150;purine ribonucleotide metabolic process;1.38001635821875e-10!GO:0051028;mRNA transport;1.47847100765546e-10!GO:0009260;ribonucleotide biosynthetic process;1.48257145565687e-10!GO:0009055;electron carrier activity;3.11351899219571e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.59838882201538e-10!GO:0051188;cofactor biosynthetic process;4.36492183770668e-10!GO:0016779;nucleotidyltransferase activity;4.89487239536994e-10!GO:0016568;chromatin modification;6.25023445727282e-10!GO:0043566;structure-specific DNA binding;8.94810806927721e-10!GO:0030532;small nuclear ribonucleoprotein complex;1.03910127547715e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.16364801152284e-09!GO:0006464;protein modification process;1.51527186480341e-09!GO:0016740;transferase activity;1.5817398667236e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.58232007348365e-09!GO:0003712;transcription cofactor activity;2.35133083480458e-09!GO:0007005;mitochondrion organization and biogenesis;2.52005160205205e-09!GO:0009141;nucleoside triphosphate metabolic process;3.23887579128064e-09!GO:0000775;chromosome, pericentric region;3.66012935782367e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.91349778310852e-09!GO:0006334;nucleosome assembly;4.25908462268009e-09!GO:0009060;aerobic respiration;7.03917737827151e-09!GO:0009199;ribonucleoside triphosphate metabolic process;7.69041984028482e-09!GO:0016853;isomerase activity;9.13945807483491e-09!GO:0031497;chromatin assembly;1.0836831234413e-08!GO:0016192;vesicle-mediated transport;1.28561531721124e-08!GO:0015630;microtubule cytoskeleton;1.51780165562929e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.7289011085256e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.80804614773058e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.80804614773058e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.00843272030132e-08!GO:0005793;ER-Golgi intermediate compartment;2.05127011404894e-08!GO:0006366;transcription from RNA polymerase II promoter;2.05518912723034e-08!GO:0019222;regulation of metabolic process;2.27614544395118e-08!GO:0005667;transcription factor complex;2.33176202380802e-08!GO:0045333;cellular respiration;2.66738321804279e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.89254510908896e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.89254510908896e-08!GO:0009056;catabolic process;2.91084226727351e-08!GO:0043687;post-translational protein modification;2.91084226727351e-08!GO:0003697;single-stranded DNA binding;3.17588743463492e-08!GO:0015986;ATP synthesis coupled proton transport;3.22671202977571e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.22671202977571e-08!GO:0003899;DNA-directed RNA polymerase activity;3.81790905205008e-08!GO:0008094;DNA-dependent ATPase activity;5.12267233521519e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.09579177576147e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.09579177576147e-08!GO:0008639;small protein conjugating enzyme activity;7.53824287934808e-08!GO:0005657;replication fork;7.83543147683418e-08!GO:0009108;coenzyme biosynthetic process;8.56243873990675e-08!GO:0016741;transferase activity, transferring one-carbon groups;9.44771816576481e-08!GO:0005819;spindle;9.89492716514633e-08!GO:0043623;cellular protein complex assembly;9.91230764191857e-08!GO:0019829;cation-transporting ATPase activity;1.2439232736007e-07!GO:0046034;ATP metabolic process;1.47062882236189e-07!GO:0006606;protein import into nucleus;1.50392943923911e-07!GO:0008168;methyltransferase activity;1.57029412004491e-07!GO:0050794;regulation of cellular process;1.60141620767196e-07!GO:0004842;ubiquitin-protein ligase activity;1.73806656272946e-07!GO:0051170;nuclear import;1.77274417971191e-07!GO:0008033;tRNA processing;2.01675108858089e-07!GO:0006099;tricarboxylic acid cycle;2.1343619290835e-07!GO:0046356;acetyl-CoA catabolic process;2.1343619290835e-07!GO:0019787;small conjugating protein ligase activity;2.26306257519077e-07!GO:0045259;proton-transporting ATP synthase complex;2.50164581242961e-07!GO:0009109;coenzyme catabolic process;2.59724069854629e-07!GO:0006084;acetyl-CoA metabolic process;3.07085783182753e-07!GO:0006752;group transfer coenzyme metabolic process;3.38948805362106e-07!GO:0007051;spindle organization and biogenesis;3.63181453316238e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.27303831396329e-07!GO:0009117;nucleotide metabolic process;4.83428370524159e-07!GO:0006754;ATP biosynthetic process;5.01124380369438e-07!GO:0006753;nucleoside phosphate metabolic process;5.01124380369438e-07!GO:0005768;endosome;5.0409014200786e-07!GO:0006350;transcription;5.59016873415995e-07!GO:0016881;acid-amino acid ligase activity;5.743712275363e-07!GO:0006888;ER to Golgi vesicle-mediated transport;7.94441486694707e-07!GO:0005762;mitochondrial large ribosomal subunit;9.03619019416581e-07!GO:0000315;organellar large ribosomal subunit;9.03619019416581e-07!GO:0000245;spliceosome assembly;9.72305790011181e-07!GO:0051187;cofactor catabolic process;1.08585865305213e-06!GO:0031323;regulation of cellular metabolic process;1.18024901686554e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.30692045674567e-06!GO:0005788;endoplasmic reticulum lumen;1.74294344664499e-06!GO:0044440;endosomal part;1.95262255342237e-06!GO:0010008;endosome membrane;1.95262255342237e-06!GO:0000075;cell cycle checkpoint;2.30016525554015e-06!GO:0051329;interphase of mitotic cell cycle;2.53032442712968e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.58270039266056e-06!GO:0012501;programmed cell death;3.96480463057863e-06!GO:0000314;organellar small ribosomal subunit;4.11422045984535e-06!GO:0005763;mitochondrial small ribosomal subunit;4.11422045984535e-06!GO:0005813;centrosome;5.22940269184341e-06!GO:0006915;apoptosis;5.83608573563982e-06!GO:0006839;mitochondrial transport;5.89404714939769e-06!GO:0032446;protein modification by small protein conjugation;6.30644482411513e-06!GO:0051325;interphase;7.04708339124338e-06!GO:0000151;ubiquitin ligase complex;7.04708339124338e-06!GO:0044452;nucleolar part;7.55482309320599e-06!GO:0005815;microtubule organizing center;8.55247602413895e-06!GO:0003724;RNA helicase activity;1.00548858163494e-05!GO:0016491;oxidoreductase activity;1.05693021891521e-05!GO:0016787;hydrolase activity;1.21007765480145e-05!GO:0006613;cotranslational protein targeting to membrane;1.24203819445054e-05!GO:0044431;Golgi apparatus part;1.29963386819637e-05!GO:0051246;regulation of protein metabolic process;1.3014859617978e-05!GO:0006091;generation of precursor metabolites and energy;1.4172670238584e-05!GO:0010468;regulation of gene expression;1.56236054346665e-05!GO:0048475;coated membrane;1.65754444475916e-05!GO:0030117;membrane coat;1.65754444475916e-05!GO:0016567;protein ubiquitination;1.67079217160678e-05!GO:0043681;protein import into mitochondrion;2.24166897603817e-05!GO:0008219;cell death;2.630256226802e-05!GO:0016265;death;2.630256226802e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.73129029491335e-05!GO:0003678;DNA helicase activity;2.77014343656459e-05!GO:0003677;DNA binding;3.18209502231348e-05!GO:0016859;cis-trans isomerase activity;3.2255244211448e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.25425959514177e-05!GO:0008654;phospholipid biosynthetic process;3.25455517231811e-05!GO:0006310;DNA recombination;3.48431813772107e-05!GO:0000776;kinetochore;3.60988217232095e-05!GO:0016363;nuclear matrix;3.82791655347851e-05!GO:0043021;ribonucleoprotein binding;4.00054842252883e-05!GO:0006626;protein targeting to mitochondrion;4.00054842252883e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.08132250670766e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.25694146901171e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.51548303795263e-05!GO:0045454;cell redox homeostasis;4.55350825491104e-05!GO:0032774;RNA biosynthetic process;4.61040026524177e-05!GO:0003682;chromatin binding;5.31363155959596e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.64714205991601e-05!GO:0030120;vesicle coat;6.0936347276657e-05!GO:0030662;coated vesicle membrane;6.0936347276657e-05!GO:0006351;transcription, DNA-dependent;6.11718042953435e-05!GO:0005770;late endosome;6.28439911327964e-05!GO:0006383;transcription from RNA polymerase III promoter;6.59917887906049e-05!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;6.7297046100314e-05!GO:0005798;Golgi-associated vesicle;7.03476995773882e-05!GO:0046483;heterocycle metabolic process;7.25744480828089e-05!GO:0003690;double-stranded DNA binding;7.44567478008119e-05!GO:0006302;double-strand break repair;7.69608362349197e-05!GO:0000059;protein import into nucleus, docking;8.30881496888811e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;8.31719078879259e-05!GO:0007006;mitochondrial membrane organization and biogenesis;9.48390147404206e-05!GO:0045786;negative regulation of progression through cell cycle;9.75764842294867e-05!GO:0005769;early endosome;0.00010040019264364!GO:0003684;damaged DNA binding;0.000104030588377942!GO:0007059;chromosome segregation;0.000109935578358919!GO:0000786;nucleosome;0.000133672334796072!GO:0004298;threonine endopeptidase activity;0.000149630022624662!GO:0046474;glycerophospholipid biosynthetic process;0.000152433462857059!GO:0000049;tRNA binding;0.000156637723397408!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000164607469986971!GO:0051168;nuclear export;0.000177575838901708!GO:0030880;RNA polymerase complex;0.000183548191094642!GO:0031968;organelle outer membrane;0.000195132765935245!GO:0050662;coenzyme binding;0.000224556375624832!GO:0031988;membrane-bound vesicle;0.000228962848037669!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000236226235687388!GO:0008186;RNA-dependent ATPase activity;0.000237765039486632!GO:0009165;nucleotide biosynthetic process;0.00024146391121553!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000241780095496178!GO:0051052;regulation of DNA metabolic process;0.000246599117795287!GO:0031324;negative regulation of cellular metabolic process;0.000251163961690766!GO:0003713;transcription coactivator activity;0.000269686989093358!GO:0006414;translational elongation;0.000273734277242431!GO:0016564;transcription repressor activity;0.00027888166509363!GO:0006793;phosphorus metabolic process;0.000286230894090901!GO:0006796;phosphate metabolic process;0.000286230894090901!GO:0046489;phosphoinositide biosynthetic process;0.000286230894090901!GO:0019867;outer membrane;0.000286230894090901!GO:0005741;mitochondrial outer membrane;0.000289154012647438!GO:0032508;DNA duplex unwinding;0.00031329599134412!GO:0032392;DNA geometric change;0.00031329599134412!GO:0003714;transcription corepressor activity;0.000320747257771039!GO:0031982;vesicle;0.000323805427509071!GO:0000139;Golgi membrane;0.000325176463381307!GO:0006520;amino acid metabolic process;0.000355560166573116!GO:0003729;mRNA binding;0.000356848205335665!GO:0016023;cytoplasmic membrane-bound vesicle;0.000363881002316052!GO:0006612;protein targeting to membrane;0.000364557709829156!GO:0005048;signal sequence binding;0.000387327165341881!GO:0009451;RNA modification;0.000423995087393161!GO:0003924;GTPase activity;0.000455381582105059!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000457619189932176!GO:0000428;DNA-directed RNA polymerase complex;0.000457619189932176!GO:0006082;organic acid metabolic process;0.000464422328977664!GO:0008652;amino acid biosynthetic process;0.000470080165760368!GO:0030867;rough endoplasmic reticulum membrane;0.000477629870299153!GO:0007052;mitotic spindle organization and biogenesis;0.00048040964249938!GO:0007017;microtubule-based process;0.000489867802657624!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00049430188913751!GO:0019752;carboxylic acid metabolic process;0.000501996130475825!GO:0031072;heat shock protein binding;0.000502367571623784!GO:0050789;regulation of biological process;0.000505181394109148!GO:0045449;regulation of transcription;0.000508049965700872!GO:0006270;DNA replication initiation;0.000514458766796962!GO:0044262;cellular carbohydrate metabolic process;0.000537571253218308!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000546506001748351!GO:0005684;U2-dependent spliceosome;0.000546506001748351!GO:0019899;enzyme binding;0.000576728659772052!GO:0006284;base-excision repair;0.000589333262885557!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000601927896592194!GO:0051920;peroxiredoxin activity;0.000611080396395561!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000611262803110915!GO:0016310;phosphorylation;0.000615768177154002!GO:0051427;hormone receptor binding;0.000634349799937094!GO:0031410;cytoplasmic vesicle;0.000650820073417466!GO:0004004;ATP-dependent RNA helicase activity;0.000662302334569757!GO:0005525;GTP binding;0.000669771482648406!GO:0006268;DNA unwinding during replication;0.000684150728785839!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000691324901635163!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.000693737166381245!GO:0007088;regulation of mitosis;0.000715874509829345!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000718076880757353!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000718076880757353!GO:0006352;transcription initiation;0.000775155199196766!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000779771811455828!GO:0015631;tubulin binding;0.000781454523237308!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000836351027682379!GO:0005791;rough endoplasmic reticulum;0.000861221745000641!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00089896216634021!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00089896216634021!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00089896216634021!GO:0004518;nuclease activity;0.000984752145252677!GO:0015992;proton transport;0.00100012384457355!GO:0006338;chromatin remodeling;0.00100459645447978!GO:0006818;hydrogen transport;0.00101846551965844!GO:0005773;vacuole;0.00102976956119699!GO:0035257;nuclear hormone receptor binding;0.00117229719572988!GO:0003746;translation elongation factor activity;0.0011751025902677!GO:0051539;4 iron, 4 sulfur cluster binding;0.00118702023213816!GO:0048471;perinuclear region of cytoplasm;0.00126161920216876!GO:0043284;biopolymer biosynthetic process;0.00126305148564652!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00131958459095853!GO:0015399;primary active transmembrane transporter activity;0.00131958459095853!GO:0006506;GPI anchor biosynthetic process;0.00136409789353728!GO:0005637;nuclear inner membrane;0.00139220860397154!GO:0004527;exonuclease activity;0.00139832567095018!GO:0005876;spindle microtubule;0.00140628486599266!GO:0048037;cofactor binding;0.0014399514399705!GO:0007093;mitotic cell cycle checkpoint;0.00145006801148194!GO:0051789;response to protein stimulus;0.00146097539759378!GO:0006986;response to unfolded protein;0.00146097539759378!GO:0006144;purine base metabolic process;0.00158837751044266!GO:0005885;Arp2/3 protein complex;0.00161224025107094!GO:0051540;metal cluster binding;0.00163752364623432!GO:0051536;iron-sulfur cluster binding;0.00163752364623432!GO:0009892;negative regulation of metabolic process;0.0016981372362557!GO:0051087;chaperone binding;0.00171492738200951!GO:0006497;protein amino acid lipidation;0.00172024627116765!GO:0006505;GPI anchor metabolic process;0.00174231510279698!GO:0009112;nucleobase metabolic process;0.00182919687976832!GO:0048500;signal recognition particle;0.0018580021598317!GO:0043596;nuclear replication fork;0.00186982178096005!GO:0000228;nuclear chromosome;0.00188259452937667!GO:0033116;ER-Golgi intermediate compartment membrane;0.00195097269863522!GO:0031970;organelle envelope lumen;0.00210678340998016!GO:0005874;microtubule;0.00212963234381044!GO:0009116;nucleoside metabolic process;0.00214961382790858!GO:0008250;oligosaccharyl transferase complex;0.00222398310288468!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00238278457083895!GO:0004576;oligosaccharyl transferase activity;0.00240574279155856!GO:0016126;sterol biosynthetic process;0.00262410093635442!GO:0006401;RNA catabolic process;0.0026390149596282!GO:0006402;mRNA catabolic process;0.00266865960853012!GO:0003756;protein disulfide isomerase activity;0.00273458902693415!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.00273458902693415!GO:0006275;regulation of DNA replication;0.00273671086614651!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00278015457904119!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00287268150606774!GO:0000323;lytic vacuole;0.00289051063309402!GO:0005764;lysosome;0.00289051063309402!GO:0046128;purine ribonucleoside metabolic process;0.00289145534965995!GO:0042278;purine nucleoside metabolic process;0.00289145534965995!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00291670204933583!GO:0016481;negative regulation of transcription;0.00296079919890519!GO:0000922;spindle pole;0.00297297586444041!GO:0042158;lipoprotein biosynthetic process;0.00299943972786016!GO:0009124;nucleoside monophosphate biosynthetic process;0.00307694789448586!GO:0009123;nucleoside monophosphate metabolic process;0.00307694789448586!GO:0006650;glycerophospholipid metabolic process;0.00313789164229138!GO:0008312;7S RNA binding;0.00315471938078089!GO:0005758;mitochondrial intermembrane space;0.0031636869336169!GO:0006355;regulation of transcription, DNA-dependent;0.00322333078078329!GO:0006400;tRNA modification;0.00325895258420796!GO:0031252;leading edge;0.00332878185516047!GO:0006595;polyamine metabolic process;0.0033709941223014!GO:0042981;regulation of apoptosis;0.00340192867946139!GO:0046467;membrane lipid biosynthetic process;0.00341646496837721!GO:0008610;lipid biosynthetic process;0.00341646496837721!GO:0004003;ATP-dependent DNA helicase activity;0.00341646496837721!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00345715252020537!GO:0016251;general RNA polymerase II transcription factor activity;0.00354434890559852!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00356574948057302!GO:0006519;amino acid and derivative metabolic process;0.00356574948057302!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00359338106270535!GO:0045047;protein targeting to ER;0.00359338106270535!GO:0006289;nucleotide-excision repair;0.0037853328281235!GO:0030384;phosphoinositide metabolic process;0.00381953178932458!GO:0030663;COPI coated vesicle membrane;0.00383746422430629!GO:0030126;COPI vesicle coat;0.00383746422430629!GO:0003711;transcription elongation regulator activity;0.00386336773360264!GO:0008139;nuclear localization sequence binding;0.0040188313205618!GO:0006740;NADPH regeneration;0.00409899310709567!GO:0006098;pentose-phosphate shunt;0.00409899310709567!GO:0009081;branched chain family amino acid metabolic process;0.00410134858113352!GO:0042393;histone binding;0.0041073519977716!GO:0043067;regulation of programmed cell death;0.00420686321369029!GO:0051053;negative regulation of DNA metabolic process;0.00421885665463769!GO:0051287;NAD binding;0.00433011227156594!GO:0000082;G1/S transition of mitotic cell cycle;0.00435053580569131!GO:0006695;cholesterol biosynthetic process;0.00452879647849989!GO:0006916;anti-apoptosis;0.00454714736652656!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00472516737573792!GO:0008180;signalosome;0.00490756764471983!GO:0048487;beta-tubulin binding;0.00537541436598266!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00538046064031149!GO:0008017;microtubule binding;0.00543904417364215!GO:0030133;transport vesicle;0.00554553252149407!GO:0016272;prefoldin complex;0.0056103238507092!GO:0019843;rRNA binding;0.00563182869063802!GO:0009161;ribonucleoside monophosphate metabolic process;0.00600909331288575!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00600909331288575!GO:0000096;sulfur amino acid metabolic process;0.00606844875878653!GO:0031570;DNA integrity checkpoint;0.00607704698326951!GO:0006220;pyrimidine nucleotide metabolic process;0.00614491692273372!GO:0032259;methylation;0.00628104735687971!GO:0048523;negative regulation of cellular process;0.00637766434097368!GO:0016563;transcription activator activity;0.00639592462572582!GO:0006891;intra-Golgi vesicle-mediated transport;0.00646597159436101!GO:0006405;RNA export from nucleus;0.00648336063819599!GO:0003702;RNA polymerase II transcription factor activity;0.00662570633179363!GO:0043022;ribosome binding;0.0067020577662793!GO:0030137;COPI-coated vesicle;0.00699365321114826!GO:0006984;ER-nuclear signaling pathway;0.00705365718793512!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00705365718793512!GO:0015002;heme-copper terminal oxidase activity;0.00705365718793512!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00705365718793512!GO:0004129;cytochrome-c oxidase activity;0.00705365718793512!GO:0000339;RNA cap binding;0.00730820291474736!GO:0003887;DNA-directed DNA polymerase activity;0.00737367348541034!GO:0042802;identical protein binding;0.00737367348541034!GO:0007021;tubulin folding;0.0075992816513091!GO:0032561;guanyl ribonucleotide binding;0.00765570943005457!GO:0019001;guanyl nucleotide binding;0.00765570943005457!GO:0005996;monosaccharide metabolic process;0.00768246575939508!GO:0018196;peptidyl-asparagine modification;0.00771259256082188!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00771259256082188!GO:0000792;heterochromatin;0.00795098530774927!GO:0019318;hexose metabolic process;0.00820768189710244!GO:0006779;porphyrin biosynthetic process;0.00820794431710431!GO:0033014;tetrapyrrole biosynthetic process;0.00820794431710431!GO:0000910;cytokinesis;0.00837900019043315!GO:0006611;protein export from nucleus;0.00839057347910841!GO:0030027;lamellipodium;0.00872748758274098!GO:0000097;sulfur amino acid biosynthetic process;0.00873851904024885!GO:0032981;mitochondrial respiratory chain complex I assembly;0.00893665211585388!GO:0010257;NADH dehydrogenase complex assembly;0.00893665211585388!GO:0033108;mitochondrial respiratory chain complex assembly;0.00893665211585388!GO:0009119;ribonucleoside metabolic process;0.00916487664693764!GO:0005832;chaperonin-containing T-complex;0.0092972591413381!GO:0008276;protein methyltransferase activity;0.00967720093269053!GO:0000819;sister chromatid segregation;0.00986308853051228!GO:0043601;nuclear replisome;0.0101340416050135!GO:0030894;replisome;0.0101340416050135!GO:0019783;small conjugating protein-specific protease activity;0.0103220816371073!GO:0043492;ATPase activity, coupled to movement of substances;0.0103241041426094!GO:0031369;translation initiation factor binding;0.0103720065230911!GO:0016790;thiolester hydrolase activity;0.0103720065230911!GO:0045947;negative regulation of translational initiation;0.0105641523106785!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0106574879725895!GO:0016584;nucleosome positioning;0.0107899631131111!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.010978590340539!GO:0051252;regulation of RNA metabolic process;0.0110167314737077!GO:0006378;mRNA polyadenylation;0.0112104691160179!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0114942873944534!GO:0030145;manganese ion binding;0.0116361309137838!GO:0000070;mitotic sister chromatid segregation;0.0117946414030187!GO:0009303;rRNA transcription;0.0119431962563165!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0123209448384679!GO:0045039;protein import into mitochondrial inner membrane;0.0123209448384679!GO:0016860;intramolecular oxidoreductase activity;0.0123209448384679!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.012605534179454!GO:0030118;clathrin coat;0.0126540557340327!GO:0043189;H4/H2A histone acetyltransferase complex;0.0127107461426176!GO:0006739;NADP metabolic process;0.0132308487131841!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0132961134626055!GO:0000152;nuclear ubiquitin ligase complex;0.0136125103728029!GO:0006778;porphyrin metabolic process;0.0138780132235588!GO:0033013;tetrapyrrole metabolic process;0.0138780132235588!GO:0004843;ubiquitin-specific protease activity;0.0139315835981122!GO:0008097;5S rRNA binding;0.0141882820615852!GO:0065009;regulation of a molecular function;0.0144899755017811!GO:0051320;S phase;0.0145701151690217!GO:0000725;recombinational repair;0.0147776177750945!GO:0000724;double-strand break repair via homologous recombination;0.0147776177750945!GO:0005844;polysome;0.0148590761887847!GO:0043624;cellular protein complex disassembly;0.0149925660388751!GO:0051098;regulation of binding;0.0150728445052724!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0151288067497003!GO:0004177;aminopeptidase activity;0.0151945922045216!GO:0009067;aspartate family amino acid biosynthetic process;0.0153424562639073!GO:0008156;negative regulation of DNA replication;0.0157052632858485!GO:0040029;regulation of gene expression, epigenetic;0.0158508187796783!GO:0032200;telomere organization and biogenesis;0.0161774866260116!GO:0000723;telomere maintenance;0.0161774866260116!GO:0006007;glucose catabolic process;0.0168161620548718!GO:0005663;DNA replication factor C complex;0.0170188457326774!GO:0044450;microtubule organizing center part;0.0172685568875473!GO:0016407;acetyltransferase activity;0.0173520079449456!GO:0006367;transcription initiation from RNA polymerase II promoter;0.017444945402087!GO:0006541;glutamine metabolic process;0.0175628253547166!GO:0006730;one-carbon compound metabolic process;0.0175710209587965!GO:0005869;dynactin complex;0.0175710209587965!GO:0016044;membrane organization and biogenesis;0.0177013163823929!GO:0004221;ubiquitin thiolesterase activity;0.0177451079061521!GO:0035267;NuA4 histone acetyltransferase complex;0.0180168029405746!GO:0006607;NLS-bearing substrate import into nucleus;0.0180447889260087!GO:0005669;transcription factor TFIID complex;0.018338933734808!GO:0006417;regulation of translation;0.018700227382341!GO:0006733;oxidoreduction coenzyme metabolic process;0.0187375412689825!GO:0045045;secretory pathway;0.0187375412689825!GO:0031124;mRNA 3'-end processing;0.0192859162368518!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0192859162368518!GO:0043069;negative regulation of programmed cell death;0.019528722273848!GO:0043488;regulation of mRNA stability;0.019528722273848!GO:0043487;regulation of RNA stability;0.019528722273848!GO:0046966;thyroid hormone receptor binding;0.0201498873551268!GO:0004674;protein serine/threonine kinase activity;0.0202687002392226!GO:0006509;membrane protein ectodomain proteolysis;0.0210355291200029!GO:0033619;membrane protein proteolysis;0.0210355291200029!GO:0043066;negative regulation of apoptosis;0.0213173642992139!GO:0016646;oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor;0.0215331614766353!GO:0051101;regulation of DNA binding;0.0216783447044398!GO:0022890;inorganic cation transmembrane transporter activity;0.0223112480046155!GO:0000123;histone acetyltransferase complex;0.0223417984204181!GO:0031577;spindle checkpoint;0.0224595132182063!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0224595132182063!GO:0030433;ER-associated protein catabolic process;0.0226900251912868!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0226900251912868!GO:0043414;biopolymer methylation;0.0226993607709773!GO:0017134;fibroblast growth factor binding;0.0230995715128948!GO:0007010;cytoskeleton organization and biogenesis;0.0233205412236403!GO:0000077;DNA damage checkpoint;0.0237230294233488!GO:0044454;nuclear chromosome part;0.0237230294233488!GO:0001522;pseudouridine synthesis;0.0237583354905484!GO:0005680;anaphase-promoting complex;0.0240830882895118!GO:0009396;folic acid and derivative biosynthetic process;0.0241341840663204!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.024434034902563!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.024434034902563!GO:0009126;purine nucleoside monophosphate metabolic process;0.024434034902563!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.024434034902563!GO:0009308;amine metabolic process;0.024434034902563!GO:0008190;eukaryotic initiation factor 4E binding;0.0245849336247513!GO:0032984;macromolecular complex disassembly;0.0246062211673853!GO:0006376;mRNA splice site selection;0.0252610808026208!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0252610808026208!GO:0030496;midbody;0.0254189182363031!GO:0044438;microbody part;0.0258223934608679!GO:0044439;peroxisomal part;0.0258223934608679!GO:0000084;S phase of mitotic cell cycle;0.0261610193816117!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0265193592564809!GO:0000178;exosome (RNase complex);0.0267381761323164!GO:0016585;chromatin remodeling complex;0.026914352176114!GO:0016453;C-acetyltransferase activity;0.0269433332194444!GO:0030508;thiol-disulfide exchange intermediate activity;0.0275907239463783!GO:0009066;aspartate family amino acid metabolic process;0.0285331179963494!GO:0004523;ribonuclease H activity;0.0288641859454418!GO:0016417;S-acyltransferase activity;0.0291821555650386!GO:0008022;protein C-terminus binding;0.0295179118777875!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0296386285568717!GO:0022411;cellular component disassembly;0.0301080732835904!GO:0030134;ER to Golgi transport vesicle;0.0302581997126151!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0307779950472422!GO:0030119;AP-type membrane coat adaptor complex;0.0316457561373588!GO:0006118;electron transport;0.0317407460088805!GO:0000287;magnesium ion binding;0.03182708287458!GO:0008632;apoptotic program;0.0318838238210538!GO:0004448;isocitrate dehydrogenase activity;0.0320283136933551!GO:0031901;early endosome membrane;0.0323373622251284!GO:0006783;heme biosynthetic process;0.0323556778947283!GO:0006807;nitrogen compound metabolic process;0.0326687183841848!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0327144072016956!GO:0031529;ruffle organization and biogenesis;0.0328049432781522!GO:0007346;regulation of progression through mitotic cell cycle;0.0336587865155319!GO:0031903;microbody membrane;0.0340926770260558!GO:0005778;peroxisomal membrane;0.0340926770260558!GO:0005881;cytoplasmic microtubule;0.0342257263122509!GO:0030131;clathrin adaptor complex;0.034815304479153!GO:0004659;prenyltransferase activity;0.0349889531004238!GO:0031625;ubiquitin protein ligase binding;0.0355628088501832!GO:0030658;transport vesicle membrane;0.0355835637745834!GO:0005092;GDP-dissociation inhibitor activity;0.0356639785658017!GO:0048519;negative regulation of biological process;0.0357423492400037!GO:0046822;regulation of nucleocytoplasmic transport;0.0360335802585272!GO:0005905;coated pit;0.0361877773303138!GO:0046112;nucleobase biosynthetic process;0.0366475502352497!GO:0009083;branched chain family amino acid catabolic process;0.0371761330531179!GO:0000726;non-recombinational repair;0.0373419794381039!GO:0043241;protein complex disassembly;0.0373419794381039!GO:0007050;cell cycle arrest;0.0380511286193538!GO:0008601;protein phosphatase type 2A regulator activity;0.0384347185850102!GO:0009113;purine base biosynthetic process;0.0385450432622619!GO:0008408;3'-5' exonuclease activity;0.0388471718214091!GO:0003923;GPI-anchor transamidase activity;0.0390404659621544!GO:0016255;attachment of GPI anchor to protein;0.0390404659621544!GO:0042765;GPI-anchor transamidase complex;0.0390404659621544!GO:0003725;double-stranded RNA binding;0.0394751833850867!GO:0046037;GMP metabolic process;0.0394751833850867!GO:0006177;GMP biosynthetic process;0.0394751833850867!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0400882742053243!GO:0000209;protein polyubiquitination;0.040294062558581!GO:0007004;telomere maintenance via telomerase;0.0410081552851525!GO:0032153;cell division site;0.0410196485402426!GO:0032155;cell division site part;0.0410196485402426!GO:0050178;phenylpyruvate tautomerase activity;0.0411302739762529!GO:0031123;RNA 3'-end processing;0.0411302739762529!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.041186063227002!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0415261792129829!GO:0016408;C-acyltransferase activity;0.0417028362223471!GO:0006892;post-Golgi vesicle-mediated transport;0.0421213673591319!GO:0031647;regulation of protein stability;0.0422206400441852!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0422206400441852!GO:0042788;polysomal ribosome;0.0422206400441852!GO:0004549;tRNA-specific ribonuclease activity;0.0425490000459185!GO:0032507;maintenance of cellular protein localization;0.0433099687503442!GO:0042770;DNA damage response, signal transduction;0.0433918155861923!GO:0008538;proteasome activator activity;0.0440518908716144!GO:0005784;translocon complex;0.0444999083766261!GO:0030911;TPR domain binding;0.046107459029621!GO:0005652;nuclear lamina;0.0463217672523645!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0465271397031699!GO:0032039;integrator complex;0.0465271397031699!GO:0031902;late endosome membrane;0.0467656045890385!GO:0004526;ribonuclease P activity;0.0469720219748403!GO:0006301;postreplication repair;0.0470962106103423!GO:0047485;protein N-terminus binding;0.0471288663698278!GO:0030176;integral to endoplasmic reticulum membrane;0.0473086521484647!GO:0031371;ubiquitin conjugating enzyme complex;0.0474707418705544!GO:0008234;cysteine-type peptidase activity;0.0475999132917854!GO:0008536;Ran GTPase binding;0.0481512559068848!GO:0042168;heme metabolic process;0.0488955136786003!GO:0006769;nicotinamide metabolic process;0.0489957258896661!GO:0033170;DNA-protein loading ATPase activity;0.049130625549754!GO:0003689;DNA clamp loader activity;0.049130625549754!GO:0022884;macromolecule transmembrane transporter activity;0.0491613451044088!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0491613451044088!GO:0045892;negative regulation of transcription, DNA-dependent;0.0496529912223035!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0498463021941717
|sample_id=10774
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=thorax
|top_motifs=TOPORS:1.93233708865;PAX4:1.81201177638;POU1F1:1.7605381254;PITX1..3:1.68350006909;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.58188084132;FOXP1:1.54971737937;CDX1,2,4:1.49326718469;E2F1..5:1.44375690212;NRF1:1.36132282276;CRX:1.35556070523;ZBTB16:1.35333740351;NFY{A,B,C}:1.29733075684;TEF:1.29505171912;YY1:1.19169434228;ZNF143:1.17625804436;FOXD3:1.15865222345;IKZF2:1.15616865249;PBX1:1.08343717498;SOX{8,9,10}:1.07848039849;ELK1,4_GABP{A,B1}:1.05232146183;DBP:1.00410716419;HOXA9_MEIS1:0.998349986515;NANOG:0.949791219122;ARID5B:0.946805052923;AIRE:0.93419848378;NKX6-1,2:0.90109111904;PAX6:0.800465730929;ADNP_IRX_SIX_ZHX:0.777631306636;LHX3,4:0.773802294661;HOX{A5,B5}:0.771715205424;PAX8:0.768292248317;PRRX1,2:0.752560883707;PAX1,9:0.737980739673;ALX1:0.716698035979;OCT4_SOX2{dimer}:0.70155835145;PAX3,7:0.676282032545;ZNF384:0.635560591564;GFI1:0.633235834032;TFDP1:0.629671949453;BREu{core}:0.628124222812;RFX1:0.587358964762;STAT5{A,B}:0.550562898888;CUX2:0.537727322834;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.50332147358;RBPJ:0.499851120688;NKX3-1:0.494732613839;POU6F1:0.46770591525;POU3F1..4:0.463934114495;FOXQ1:0.434142794384;SOX5:0.429477777548;bHLH_family:0.418930166171;HOX{A4,D4}:0.41620328976;SOX17:0.389414828776;PRDM1:0.379662537953;EN1,2:0.344763412739;AHR_ARNT_ARNT2:0.320580449213;RFX2..5_RFXANK_RFXAP:0.271449222955;FOXA2:0.24926579663;GATA6:0.240714910401;FOXL1:0.234408002506;ONECUT1,2:0.223277888922;POU2F1..3:0.213955105944;EVI1:0.213117238553;HOX{A6,A7,B6,B7}:0.20740627749;NKX2-3_NKX2-5:0.200448678569;NKX2-2,8:0.183021181002;STAT1,3:0.181952592405;TLX1..3_NFIC{dimer}:0.16893098341;MYB:0.151588246109;ATF4:0.124154187122;CREB1:0.1078690984;HES1:0.104826716329;KLF4:0.0992706532776;PPARG:0.0786009077352;CDC5L:0.0722737469334;ZIC1..3:0.0679178768826;LEF1_TCF7_TCF7L1,2:0.0652996779367;FOXM1:0.0504059809298;NR5A1,2:0.023758795792;GTF2A1,2:0.0213776798882;EGR1..3:-0.00403490363246;POU5F1:-0.0350094065432;MYBL2:-0.0641954247091;UFEwm:-0.0653907925249;ATF5_CREB3:-0.0693974903381;ZFP161:-0.0813027933204;NKX2-1,4:-0.101054208923;RXR{A,B,G}:-0.109707893045;AR:-0.118718727408;MEF2{A,B,C,D}:-0.119126280499;FOXP3:-0.128749195508;HNF1A:-0.143179310256;RUNX1..3:-0.149839821411;PAX5:-0.151178257277;GATA4:-0.162716651286;GFI1B:-0.179681070531;HIC1:-0.180417989159;VSX1,2:-0.184259500526;XBP1:-0.191053009187;REST:-0.196856539003;HNF4A_NR2F1,2:-0.20636620155;DMAP1_NCOR{1,2}_SMARC:-0.207950434614;ELF1,2,4:-0.221170129547;ZBTB6:-0.22556475296;SNAI1..3:-0.226374681891;HSF1,2:-0.265256684278;HBP1_HMGB_SSRP1_UBTF:-0.284124452531;IKZF1:-0.29656469399;FOX{I1,J2}:-0.30234698581;ESRRA:-0.31090335533;HMGA1,2:-0.313833685057;GTF2I:-0.341698229697;BPTF:-0.351922457386;ZEB1:-0.357051805521;SPIB:-0.365767966842;RREB1:-0.368279195288;NFIL3:-0.415362850502;FOX{D1,D2}:-0.426495640081;NR1H4:-0.427223883954;ALX4:-0.451786550769;ATF2:-0.46808875096;CEBPA,B_DDIT3:-0.470204940001;NR6A1:-0.471358351285;ZNF423:-0.480182067686;XCPE1{core}:-0.498199916347;NANOG{mouse}:-0.504042014968;SP1:-0.504061227518;PAX2:-0.505723587336;TEAD1:-0.515550771301;TP53:-0.519594705253;FOSL2:-0.52445520016;NKX3-2:-0.526737705636;PATZ1:-0.52961032877;HAND1,2:-0.534743180492;NFKB1_REL_RELA:-0.536706688929;T:-0.555166844484;SOX2:-0.579192015565;TFAP2B:-0.581799735182;GLI1..3:-0.588372368428;JUN:-0.597097896945;SPI1:-0.615569491359;TAL1_TCF{3,4,12}:-0.628734690832;LMO2:-0.637157853685;MZF1:-0.641884381702;SREBF1,2:-0.642076451479;NFE2:-0.669171988876;MYFfamily:-0.669994323233;GZF1:-0.697017147081;ZNF238:-0.713979097296;SMAD1..7,9:-0.729708106522;ETS1,2:-0.745302413486;FOS_FOS{B,L1}_JUN{B,D}:-0.747411751925;BACH2:-0.756978421607;NHLH1,2:-0.759113634073;EBF1:-0.773874608475;TBP:-0.775382467016;FOX{F1,F2,J1}:-0.777348334814;HLF:-0.778397149323;ATF6:-0.778436965442;MTE{core}:-0.787957974428;FOXO1,3,4:-0.794632180637;MED-1{core}:-0.804962120468;MYOD1:-0.829803470418;HMX1:-0.844860509727;SPZ1:-0.846155858496;NR3C1:-0.856221893964;NFE2L2:-0.877637709594;TLX2:-0.889442155047;MTF1:-0.890829453485;NFE2L1:-0.894383194931;RORA:-0.905841423643;PDX1:-0.926805889912;IRF7:-0.969460012421;IRF1,2:-0.986708344496;FOXN1:-0.986906471961;ZNF148:-1.01664495766;GCM1,2:-1.02925163119;MAZ:-1.03370098536;NFIX:-1.0605028423;ESR1:-1.06457603483;HIF1A:-1.09463482757;TFAP2{A,C}:-1.1685198049;TBX4,5:-1.19261736489;MAFB:-1.23208375814;SRF:-1.23796503304;TGIF1:-1.29287869291;TFAP4:-1.32048171095;NFATC1..3:-1.33294754186;STAT2,4,6:-1.4028341516;EP300:-1.60913036927;RXRA_VDR{dimer}:-1.83355261837;TFCP2:-2.34222650853
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10774-110F9;search_select_hide=table117:FF:10774-110F9
}}
}}

Latest revision as of 15:03, 3 June 2020

Name:neuroectodermal tumor cell line:TASK1
Species:Human (Homo sapiens)
Library ID:CNhs11866
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuethorax
dev stageNA
sexfemale
age21
cell typeunclassifiable
cell lineTASK1
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005487
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11866 CAGE DRX007966 DRR008838
Accession ID Hg19

Library idBAMCTSS
CNhs11866 DRZ000263 DRZ001648
Accession ID Hg38

Library idBAMCTSS
CNhs11866 DRZ011613 DRZ012998
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.114
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.444
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.085
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0796
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.171
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0.179
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.148
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0441
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.442
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0068
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0508
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.504
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0681
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.225
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0.0681
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0.127
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11866

Jaspar motifP-value
MA0002.20.003
MA0003.10.316
MA0004.10.0563
MA0006.10.0545
MA0007.10.413
MA0009.10.334
MA0014.10.72
MA0017.10.106
MA0018.20.37
MA0019.10.012
MA0024.11.90084e-8
MA0025.10.255
MA0027.10.22
MA0028.18.27716e-4
MA0029.10.878
MA0030.10.125
MA0031.10.412
MA0035.20.561
MA0038.10.0527
MA0039.20.653
MA0040.10.214
MA0041.10.224
MA0042.10.466
MA0043.10.723
MA0046.10.293
MA0047.20.507
MA0048.10.0492
MA0050.17.7863e-10
MA0051.17.55975e-5
MA0052.10.0147
MA0055.13.83195e-4
MA0057.10.606
MA0058.10.029
MA0059.10.0039
MA0060.12.59273e-9
MA0061.10.0189
MA0062.20.00123
MA0065.20.523
MA0066.10.382
MA0067.10.92
MA0068.10.0397
MA0069.10.926
MA0070.10.709
MA0071.10.614
MA0072.10.99
MA0073.10.126
MA0074.10.478
MA0076.17.0469e-5
MA0077.10.528
MA0078.10.513
MA0079.20.102
MA0080.24.96672e-10
MA0081.10.124
MA0083.13.56728e-5
MA0084.10.302
MA0087.10.327
MA0088.12.46323e-4
MA0090.10.173
MA0091.10.376
MA0092.10.478
MA0093.10.0444
MA0099.21.1205e-16
MA0100.10.582
MA0101.10.011
MA0102.20.00419
MA0103.10.9
MA0104.23.25098e-4
MA0105.10.579
MA0106.10.877
MA0107.10.00185
MA0108.22.38491e-4
MA0111.10.722
MA0112.20.00839
MA0113.10.42
MA0114.10.698
MA0115.10.843
MA0116.10.606
MA0117.10.983
MA0119.10.251
MA0122.10.619
MA0124.10.236
MA0125.10.705
MA0131.10.188
MA0135.10.037
MA0136.14.73959e-6
MA0137.20.0324
MA0138.20.557
MA0139.10.945
MA0140.10.762
MA0141.10.99
MA0142.10.982
MA0143.10.327
MA0144.10.00301
MA0145.10.00205
MA0146.10.989
MA0147.17.31634e-5
MA0148.10.474
MA0149.14.80459e-5
MA0150.12.10988e-4
MA0152.10.881
MA0153.10.0383
MA0154.10.321
MA0155.10.369
MA0156.10.0626
MA0157.10.513
MA0159.10.139
MA0160.10.414
MA0162.10.381
MA0163.10.0389
MA0164.10.68
MA0258.10.262
MA0259.10.00844



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11866

Novel motifP-value
10.185
100.367
1000.0667
1010.501
1020.836
1030.0685
1040.641
1050.567
1061.84871e-4
1070.0266
1080.699
1090.703
110.741
1100.419
1110.549
1120.167
1130.172
1140.0576
1150.319
1160.372
1170.318
1180.447
1190.489
120.814
1200.962
1210.715
1220.786
1239.44134e-4
1240.687
1250.766
1260.59
1270.379
1280.0332
1290.722
130.0672
1300.401
1310.147
1320.524
1330.321
1340.372
1350.0589
1360.868
1370.0661
1380.964
1390.82
140.397
1400.572
1410.387
1420.678
1430.0437
1440.807
1450.877
1460.89
1470.756
1480.165
1490.369
150.913
1500.578
1510.33
1520.00507
1530.955
1540.477
1550.678
1560.825
1570.852
1580.264
1590.123
160.345
1600.426
1610.761
1620.545
1630.0543
1640.135
1650.559
1660.971
1670.111
1680.0872
1690.13
170.518
180.283
190.134
20.0126
200.331
210.75
220.16
233.84795e-4
240.66
250.897
260.677
270.234
280.986
290.508
30.554
300.183
310.555
320.0514
330.958
340.285
350.598
360.072
370.272
380.771
390.398
40.739
400.265
410.147
420.254
430.261
440.719
450.302
460.622
470.317
480.266
490.875
50.45
500.957
510.799
520.0526
530.397
540.48
550.24
560.558
570.124
580.557
590.0369
60.148
600.027
610.825
620.213
630.885
640.298
650.304
660.291
670.644
680.737
690.654
70.51
700.149
710.983
720.225
730.0376
740.543
750.338
760.231
770.228
780.359
790.131
80.484
800.061
810.993
820.484
830.924
840.538
850.00357
860.372
870.998
880.601
890.138
90.0705
900.142
910.3
920.188
930.973
940.606
950.839
960.629
970.538
980.815
990.604



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11866


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000479 (tissue)
0002346 (neurectoderm)
0004121 (ectoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0001062 (anatomical entity)
0010316 (germ layer / neural crest)
0005291 (embryonic tissue)
0010317 (germ layer / neural crest derived structure)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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