FF:11473-119C6: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005241 | ||
| | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005241 | ||
|accession_numbers=CAGE;DRX008097;DRR008969;DRZ000394;DRZ001779;DRZ011744;DRZ013129 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037183;DRR041549;DRZ007191 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000325,CL:0000255,CL:0000136,CL:0002615 | |||
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|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000039 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.57!370.01!TCF21;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.56!35.52!ZBED1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.55!34.25!HOXC5;;chr5:92918919..92918942,+!p1@NR2F1!1.54!145.46!NR2F1;;chr19:47523058..47523114,+!p1@NPAS1!1.48!29.18!NPAS1;;chr18:53068911..53068935,-!p4@TCF4!1.44!30.16!TCF4;;chr9:96717629..96717644,-!p1@BARX1!1.44!26.36!BARX1;;chr5:92919100..92919135,+!p3@NR2F1!1.41!29.60!NR2F1;;chr2:19558373..19558392,-!p1@OSR1!1.39!63.85!OSR1;;chr2:119605214..119605230,-!p1@EN1!1.38!23.12!EN1;;chr12:54402745..54402788,+!p1@HOXC8!1.34!20.72!HOXC8;;chrX:106960180..106960197,-!p2@TSC22D3!1.33!75.97!TSC22D3;;chr4:174450089..174450153,-!p2@HAND2!1.32!20.02!HAND2;;chr4:174451370..174451387,-!p1@HAND2!1.32!20.02!HAND2;;chr14:62162258..62162269,+!p2@HIF1A!1.26!162.24!HIF1A;;chr11:46299199..46299233,+!p1@CREB3L1!1.26!87.53!CREB3L1;;chr1:170632285..170632309,+!p1@PRRX1!1.25!19.17!PRRX1;;chr6:19837592..19837621,+!p1@ID4!1.23!95.71!ID4;;chr14:62162285..62162296,+!p3@HIF1A!1.22!80.77!HIF1A;;chr15:96874145..96874166,+!p7@NR2F2!1.22!30.02!NR2F2;;chr15:96869255..96869291,+!p6@NR2F2!1.20!27.06!NR2F2;;chr3:126076242..126076257,-!p1@KLF15!1.20!18.32!KLF15;;chr2:239756671..239756732,+!p1@TWIST2!1.18!44.82!TWIST2;;chr11:46299539..46299620,+!p2@CREB3L1!1.18!24.10!CREB3L1;;chr11:113930425..113930471,+!p1@ZBTB16!1.18!20.16!ZBTB16;;chr1:23885981..23886002,-!p1@ID3!1.16!2297.84!ID3;;chr11:47279504..47279563,+!p1@NR1H3!1.16!30.16!NR1H3;;chr15:42749722..42749739,-!p2@ZFP106!1.16!23.82!ZFP106;;chr17:46682321..46682362,-!p1@HOXB6!1.15!12.97!HOXB6;;chr8:49833948..49833973,-!p2@SNAI2!1.14!81.47!SNAI2;;chr8:25902876..25902936,-!p1@EBF2!1.14!12.83!EBF2;;chr2:239756739..239756755,+!p2@TWIST2!1.13!21.43!TWIST2;;chr5:92918956..92918969,+!p4@NR2F1!1.13!13.67!NR2F1;;chr20:30193083..30193098,+!p1@ID1!1.10!932.84!ID1;;chr5:92919068..92919082,+!p5@NR2F1!1.10!13.81!NR2F1;;chr18:19749386..19749404,+!p2@GATA6!1.09!16.07!GATA6;;chr7:73038839..73038862,-!p1@MLXIPL!1.09!11.42!MLXIPL;;chr7:150946015..150946070,-!p3@SMARCD3!1.08!23.82!SMARCD3;;chr12:80085061..80085119,-!p6@PAWR!1.08!17.48!PAWR;;chr19:50432453..50432468,+!p1@ATF5!1.06!585.95!ATF5;;chr19:46801639..46801699,+!p1@HIF3A!1.06!10.57!HIF3A;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.06!10.57!HOXC5;;chr7:27183263..27183284,-!p2@HOXA5!1.06!10.57!HOXA5;;chr8:72756637..72756664,-!p3@MSC!1.05!11.56!MSC;;chr7:27192185..27192209,-!p1@HOXA3!1.05!10.15!HOXA3;;chr10:31610110..31610159,+!p2@ZEB1!1.05!10.15!ZEB1;;chr9:132427883..132427951,+!p2@PRRX2!1.05!10.15!PRRX2;;chr15:96874012..96874042,+!p2@NR2F2!1.04!90.92!NR2F2;;chr18:19749541..19749557,+!p1@GATA6!1.04!32.00!GATA6;;chr5:158526917..158526932,-!p1@EBF1!1.04!25.23!EBF1;;chr15:96873984..96873999,+!p3@NR2F2!1.02!71.46!NR2F2;;chr8:106330656..106330684,+!p1@ZFPM2!0.99!23.40!ZFPM2;;chr2:119604456..119604501,-!p2@EN1!0.98!8.46!EN1;;chr10:114889045..114889074,+!p12@TCF7L2!0.98!8.46!TCF7L2;;chr15:96874244..96874259,+!p5@NR2F2!0.97!20.58!NR2F2;;chr2:8822176..8822196,+!p1@ID2!0.96!1165.27!ID2;;chrX:106960285..106960299,-!p1@TSC22D3!0.96!227.22!TSC22D3;;chrX:106960221..106960236,-!p3@TSC22D3!0.96!22.98!TSC22D3;;chr9:132427972..132428056,+!p1@PRRX2!0.96!10.85!PRRX2;;chr17:46675420..46675465,-!p3@HOXB6!0.95!9.16!HOXB6;;chr6:144329384..144329405,-!p1@PLAGL1!0.94!91.90!PLAGL1;;chr7:27183291..27183324,-!p1@HOXA5!0.94!7.61!HOXA5;;chr8:72756667..72756736,-!p2@MSC!0.93!12.12!MSC;;chr1:170632959..170632987,+!p4@PRRX1!0.93!8.32!PRRX1;;chr8:49833978..49833996,-!p1@SNAI2!0.92!157.73!SNAI2;;chr17:46688334..46688385,-!p1@HOXB7!0.92!10.71!HOXB7;;chr10:131762504..131762555,-!p1@EBF3!0.92!7.33!EBF3;;chr15:96876966..96877017,+!p12@NR2F2!0.91!10.43!NR2F2;;chr2:85981073..85981091,+!p5@ATOH8!0.91!7.19!ATOH8;;chr17:1959369..1959388,+!p2@HIC1!0.90!19.17!HIC1;;chr5:92919375..92919438,+!p6@NR2F1!0.90!7.47!NR2F1;;chr12:54393880..54393962,+!p1@HOXC9!0.90!6.91!HOXC9;;chr17:46687959..46688007,-!p2@HOXB7!0.89!9.58!HOXB7;;chr15:96869114..96869160,+!p11@NR2F2!0.89!9.44!NR2F2;;chr8:72756213..72756243,-!p5@MSC!0.89!8.88!MSC;;chr15:96869222..96869251,+!p18@NR2F2!0.89!8.03!NR2F2;;chr7:27196267..27196311,-!p1@HOXA7!0.89!6.77!HOXA7;;chr15:96874216..96874236,+!p13@NR2F2!0.88!10.57!NR2F2;;chr3:126076264..126076305,-!p2@KLF15!0.88!9.44!KLF15;;chr10:77161504..77161530,-!p1@ZNF503!0.87!91.34!ZNF503;;chr8:72756267..72756296,-!p4@MSC!0.87!9.58!MSC;;chr1:170633058..170633084,+!p5@PRRX1!0.86!6.20!PRRX1;;chr12:54394309..54394336,+!p2@HOXC9!0.85!6.06!HOXC9;;chrX:106960249..106960260,-!p5@TSC22D3!0.84!9.73!TSC22D3;;chr9:96717678..96717689,-!p2@BARX1!0.84!5.92!BARX1;;chr7:27183191..27183214,-!p4@HOXA5!0.84!5.92!HOXA5;;chr10:63809013..63809041,+!p3@ARID5B!0.83!33.97!ARID5B;;chr7:150945754..150945789,-!p2@SMARCD3!0.83!18.61!SMARCD3;;chr11:12696071..12696086,+!p3@TEAD1!0.83!7.75!TEAD1;;chr5:72744594..72744609,-!p1@FOXD1!0.81!27.06!FOXD1;;chr2:85980951..85981004,+!p1@ATOH8!0.81!9.30!ATOH8;;chr2:85981107..85981120,+!p3@ATOH8!0.81!5.50!ATOH8;;chr3:12392991..12393030,+!p7@PPARG!0.81!5.50!PPARG;;chr13:37494275..37494304,-!p2@SMAD9!0.81!5.50!SMAD9;;chr11:113930401..113930422,+!p3@ZBTB16!0.80!5.36!ZBTB16;;chr12:54410948..54410992,+!p3@HOXC5!0.80!5.36!HOXC5;;chr13:37494248..37494260,-!p3@SMAD9!0.80!5.36!SMAD9;;chr2:85981027..85981047,+!p8@ATOH8!0.80!5.36!ATOH8;;chr15:96869292..96869320,+!p15@NR2F2!0.79!7.75!NR2F2;;chr14:75894714..75894733,+!p1@JDP2!0.78!157.02!JDP2;;chr8:106330696..106330719,+!p2@ZFPM2!0.78!6.62!ZFPM2;;chr14:95236551..95236576,-!p2@GSC!0.78!5.07!GSC;;chr17:46690839..46690884,-!p1@HOXB8!0.78!5.07!HOXB8;;chr10:114889016..114889037,+!p15@TCF7L2!0.78!5.07!TCF7L2;;chr12:54422217..54422239,+!p3@HOXC6!0.78!5.07!HOXC6;;chr13:41240737..41240787,-!p1@FOXO1!0.77!63.57!FOXO1;;chr13:41240717..41240735,-!p2@FOXO1!0.76!35.94!FOXO1;;chr17:46621937..46621966,-!p2@HOXB2!0.76!13.81!HOXB2;;chr2:121493492..121493537,+!p2@GLI2!0.76!8.18!GLI2;;chr17:59477233..59477263,+!p1@TBX2!0.75!15.65!TBX2;;chr3:170076314..170076334,+!p2@SKIL!0.75!6.20!SKIL;;chr2:85980919..85980942,+!p4@ATOH8!0.75!4.93!ATOH8;;chr3:12392932..12392962,+!p8@PPARG!0.75!4.65!PPARG;;chr12:54394416..54394467,+!p5@HOXC9!0.75!4.65!HOXC9;;chr14:62162224..62162254,+!p1@HIF1A!0.74!727.75!HIF1A;;chr2:46524537..46524553,+!p1@EPAS1!0.74!495.60!EPAS1;;chr4:4861385..4861398,+!p1@MSX1!0.74!14.52!MSX1;;chr6:85473156..85473210,-!p2@TBX18!0.74!5.64!TBX18;;chr15:96873921..96873946,+!p1@NR2F2!0.73!136.58!NR2F2;;chr10:77161533..77161546,-!p2@ZNF503!0.73!19.03!ZNF503;;chr10:45495946..45495976,+!p2@ZNF22!0.73!4.37!ZNF22;;chr2:119605233..119605245,-!p8@EN1!0.73!4.37!EN1;;chr15:66994885..66994904,+!p7@SMAD6!0.73!4.37!SMAD6;;chr17:46687935..46687950,-!p3@HOXB7!0.73!4.37!HOXB7;;chr5:92918894..92918912,+!p2@NR2F1!0.72!15.22!NR2F1;;chr1:170633262..170633285,+!p3@PRRX1!0.72!4.93!PRRX1;;chr18:53068893..53068902,-!p28@TCF4!0.72!4.23!TCF4;;chr5:92919452..92919496,+!p11@NR2F1!0.72!4.23!NR2F1;;chr4:174451350..174451363,-!p3@HAND2!0.72!4.23!HAND2;;chr3:178789522..178789564,-!p2@ZMAT3!0.71!33.83!ZMAT3;;chr2:27357446..27357475,-!p2@PREB!0.71!15.79!PREB;;chr2:121493425..121493474,+!p1@GLI2!0.71!9.73!GLI2;;chr14:62203595..62203676,+!p4@HIF1A!0.71!8.32!HIF1A;;chr10:77161650..77161661,-!p4@ZNF503!0.71!6.06!ZNF503;;chr5:158526459..158526481,-!p2@EBF1!0.71!5.78!EBF1;;chr8:93074803..93074845,-!p1@RUNX1T1!0.71!4.09!RUNX1T1;;chr16:31076332..31076388,-!p3@ZNF668!0.71!4.09!ZNF668;;chr6:144289132..144289134,-!p3@PLAGL1!0.70!10.15!PLAGL1;;chr15:96874927..96874938,+!p8@NR2F2!0.70!9.30!NR2F2;;chr15:96874063..96874074,+!p10@NR2F2!0.70!7.89!NR2F2;;chr11:113930291..113930339,+!p2@ZBTB16!0.70!6.91!ZBTB16;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.69!44.82!GLIS2;;chr1:170633348..170633399,+!p2@PRRX1!0.69!5.50!PRRX1;;chr7:27183114..27183138,-!p3@HOXA5!0.69!3.95!HOXA5;;chr8:72755987..72756002,-!p7@MSC!0.69!3.95!MSC;;chr16:79634624..79634642,-!p1@MAF!0.68!16.63!MAF;;chr2:66662281..66662308,+!p1@MEIS1!0.68!14.52!MEIS1;;chr8:72756063..72756125,-!p1@MSC!0.68!8.32!MSC;;chr19:13134772..13134822,+!p2@NFIX!0.68!5.92!NFIX;;chr3:12330560..12330579,+!p1@PPARG!0.68!4.51!PPARG;;chr2:85981008..85981025,+!p7@ATOH8!0.68!3.81!ATOH8;;chr7:1577899..1577943,+!p3@MAFK!0.68!3.81!MAFK;;chr12:54402790..54402805,+!p2@HOXC8!0.68!3.81!HOXC8;;chr19:33793430..33793447,-!p1@CEBPA!0.67!17.48!CEBPA;;chr14:95236440..95236465,-!p1@GSC!0.67!3.66!GSC;;chr12:54447637..54447659,+!p4@HOXC4!0.67!3.66!HOXC4;;chr12:80085120..80085156,-!p14@PAWR!0.67!3.66!PAWR;;chr13:41635285..41635356,-!p3@ELF1!0.66!16.63!ELF1;;chr17:38498594..38498661,+!p2@RARA!0.66!13.67!RARA;;chr18:3450334..3450341,+!p15@TGIF1!0.66!4.79!TGIF1;;chr2:119605253..119605264,-!p5@EN1!0.66!3.52!EN1;;chr7:150945865..150945896,-!p4@SMARCD3!0.66!3.52!SMARCD3;;chr10:51572408..51572454,+!p3@NCOA4!0.65!23.54!NCOA4;;chr2:66662249..66662267,+!p2@MEIS1!0.65!15.08!MEIS1;;chr9:77112244..77112262,+!p1@RORB!0.65!3.95!RORB;;chr10:63809106..63809127,+!p1@ARID5B!0.64!53.00!ARID5B;;chr20:39946361..39946379,-!p2@ZHX3!0.64!11.42!ZHX3;;chr1:23696308..23696339,-!p2@ZNF436!0.64!7.89!ZNF436;;chr2:28618532..28618610,+!p4@FOSL2!0.64!6.20!FOSL2;;chr8:99956662..99956684,+!p1@OSR2!0.64!5.64!OSR2;;chr2:208031943..208031978,-!p5@KLF7!0.64!4.79!KLF7;;chr2:46612334..46612349,+!p6@EPAS1!0.64!4.65!EPAS1;;chr12:80084137..80084165,-!p10@PAWR!0.64!4.51!PAWR;;chr2:178129853..178129860,-!p14@NFE2L2!0.64!3.38!NFE2L2;;chr13:45151259..45151326,-!p2@TSC22D1!0.63!22.83!TSC22D1;;chr13:45151403..45151433,-!p5@TSC22D1!0.63!8.03!TSC22D1;;chr5:139487608..139487663,+!p3@PURA!0.63!7.75!PURA;;chr7:137686763..137686784,-!p5@CREB3L2!0.63!6.20!CREB3L2;;chr15:96875041..96875052,+!p17@NR2F2!0.63!5.07!NR2F2;;chr17:46691732..46691766,-!p4@HOXB8!0.63!3.24!HOXB8;;chr6:35454312..35454323,-!p9@TEAD3!0.63!3.24!TEAD3;;chr12:54402729..54402743,+!p3@HOXC8!0.63!3.24!HOXC8;;chr2:172967242..172967265,-!p2@DLX2!0.63!3.24!DLX2;;chrX:591524..591527,+!p1@SHOX!0.63!3.24!SHOX;;chr10:63809077..63809089,+!p5@ARID5B!0.62!7.61!ARID5B;;chr19:13134457..13134462,+!p5@NFIX!0.6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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000136;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002615;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001013;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323 | |||
|ffid_belonging_in_development=CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 66: | Line 43: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|is_a=EFO:0002091;;FF: | |hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor1.CNhs11054.11473-119C6.hg19.nobarcode.bam | ||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor1.CNhs11054.11473-119C6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor1.CNhs11054.11473-119C6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor1.CNhs11054.11473-119C6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Adipocyte%2520-%2520omental%252c%2520donor1.CNhs11054.11473-119C6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11473-119C6 | |||
|is_a=EFO:0002091;;FF:0000039 | |||
|is_obsolete= | |||
|library_id=CNhs11054 | |||
|library_id_phase_based=2:CNhs11054 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11473 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10012.CGATGT.11473 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11473 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10012.CGATGT.11473 | |||
|name=Adipocyte - omental, donor1 | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs11054,LSID722,release008,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=SRhi10012,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.028634144538123,0,0,0,0,-0.00715487912647345,0,0.0783938116581168,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.000159859388514982,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.298128100889077,0,0.079745908958482,0,0.0572682890762461,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.0572682890762461,0,0,0.327897173446781,-0.0969923612426051,0,0,-0.0400753381368509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0572682890762461,0,0,0,0,0.028634144538123,0,0.0217161418618637,0,0,0,-0.0381183478126708,0,0,0.01594290636588,-0.104769378189058,0.0435145907724188,0,0.452155697860329,0.028634144538123,0.0572682890762461,-0.0980353512377064,-0.109843056262772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285057543143209,0.0572682890762461,0,0,0.111480553519627,0.315104619309153,0,0,-0.0114991415316631,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0.0572682890762461,0.0572682890762461,0,0,0,0,0,0.452155697860329,0,0,0.0509492256035126,0,0.0385008591936209,-0.0862468534472258,0,0,0.0529633878530174,0,0.231666308919355,0,0.028634144538123,0.0572682890762461,0,0,0,0,0.324035830907764,0,0.515214957566708,0.028634144538123,0,0,0,0.120933812408191,0.243184840682685,0,0.12459186152828,0.0395128705737068,0,0,0,0,0.14680461390615,0,-0.0636111947174945,0.183447161572377,0.134144355748824,0.243181918495523,0.0104636301838661,0,0,0.028634144538123,0.217353710341228,0.213824128871619,0,0,0.264872113521948,0.25364837104162,0,0,0.338896263558237,0,0.211940226493248,0.250458247133127,0,-0.0343142273783233,0,0,0,0,0,0,0,0,0,0,0,1.09121370617318,0.16637408887288,-0.0139118974108305,0,0,0,0.0633741284878806,0,0,0.268475970607251,-0.146396146600961,-0.0361138370627508,-0.242432297089445,0,-0.245121437933667,0.00419859054893324,-0.350243413199232,-0.104769378189058,0.150726251517939,0.191953149070771,0,-0.0213987921504583,-0.273685551168382,-0.02043280484917,-0.0381183478126708,-0.0126735218656361,0.491810829360901,-0.505402624076227,0,0,0.107857131651075,0.732423712207241,0,0,0.0585423571043183,-0.0421994485168926,0.071876291685658,-0.0126706598111877,0.0191334205505262,0.036583324322927,-0.0108983839185475,0.198072713273833,0,0.237055002293517,0.044309607144903,0.231666308919355,0,-0.0158248491651023,-0.220284597951299,-0.12246348762683,0.0513202702158453,0.0286096161346486,0.0848188898825444,0,0.211335469894776,-0.172182369623454,0,0.310582671355075,0.0629848956924057,0,0,0,0,0.153163150959913,-0.366318699691486,0.102269983533651,-0.00118925263619013,0,-0.098444557820285,0.0215677742375655,-0.106318646042277,0,-0.202182546834308,0.125726411835975,-0.0664078434419377,-0.0287006935456803,0,-0.0612694295671506,0.298100678267964,0.228266924457044,0.0297608924685915,-0.0584468268118252,0.0530284893984557,-0.215017966198476,-0.0131038601114419,0.295114156766262,-0.0512879019770799,0.56738233369514,0,0.732541557493995,0.0504427134883468,0,-0.0115869653162124,0.102487126353322,0.0742564462681274,0,-0.0777154408089956,0.00082221496125775,-0.406718393935486,0.17795433525526,0.0917070632948032,0.0576285507799483,0,-0.138070085158277,-0.106368054216619,0,-0.135723143846782,-0.0518063399905364,0,-0.150367083334639,-0.399567865623506,0.057271525925224,-0.0850608908536571,0,0.0410938402325054,0,0.0572682890762461,0.512810809064989,-0.082312886804476,0,0.111033509722846,0.0325592123504215,-0.0732196033198051,-0.058702784358688,0.107857131651075,0,-0.114703900117235,0,0.512587077945629,0.259942399791682,0.309141429056063,-0.0541558148026103,-0.19605805241051,0,0.624421581141491,0,0,0.388099743190847,0,0.166087179178352,0,0,-0.0801195763136087,-0.116628112990133,0,0.0539285658255375,0,0.0482887928034574,0.0572682890762461,0,0,0,0,0,0,-0.165286112111887,0.000922613635182812,0.194186101142753,-0.0062527647958377,0,0.107857131651075,0,0.452155697860329,0,0,0,0,0.610630488768177,-0.0276198110191011,-0.0151602840253452,0,0,0,0,0.01594290636588,-0.0953794304436487,0,0.0213004444622809,0,0,0,0,0.0217161418618637,0,0,0,0,0.050126674597411,-0.0209213382321381,0,0,0,-0.219686112525544,0,0,0.107857131651075,0.0110262473101046,-0.000159409429008273,0,0.0572682890762461,0.469818535785849,0,-0.064478388522623,-0.0815818795468414,0,0.0545353817235625,0.387517631683097,-0.526119917474275,0,0.0572682890762461,-0.261347131789888,0,0.341826558649206,0.0629851878812522,-0.0203430708413527,0,0.000402298405690505,0,0,0,0,0.0572682890762461,0.0572682890762461,0.0518528174960386,0.0539285658255375,0,0,0,0,0,0,0.0572682890762461,0,0,0,0.182372542643044,0.0609390943014022,0.211080200494339,0,0,0,0,0,0.0572682890762461,-0.0241060230789031,-0.0444600052247925,0.028634144538123,0,0.0090669715579354,0,0,0,0,0,-0.0192702418029131,0,0,0,0,0,-0.0969923612426051,0,0,0,0.0572682890762461,-0.564807121153884,0,0,0.0783938116581168,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0660507969592016,0.198631734652154,0,0,0,0,0,0,0,-0.166976166555015,0,0,0,0,-0.0566160846327311,0,0,0,0.00306074686191858,0,-0.00715487912647345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0765815754799565,0,0,0,0.395296846113894,0.263350813313069,0.464955857490645,-0.0643770838239222,0,0,0.0417001831575042,0,0,0,0,0,0,0.0452411514514292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0572682890762461,0,0,0,0,0,0,-0.0291845695793588,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0381042439749887,0,0,0,0,0,0,-0.118215120371494,0.51099407267663,-0.0458041123222742,0,0,0,0.0427074780889217,0.0572682890762461,0,0,0.327897173446781,-0.00950909834265525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.000159859388514982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0.028634144538123,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.0850418712320334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0467268309099344,0,0,0,0,0,0,0,0,0.2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| |||
|rna_box=119 | |||
|rna_catalog_number= | |||
|rna_concentration=0.397 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.5 | |||
|rna_lot_number= | |||
|rna_od260/230=1.94 | |||
|rna_od260/280=2.04 | |||
|rna_position=C6 | |||
|rna_rin= | |||
|rna_sample_type= | |||
|rna_tube_id=119C6 | |||
|rna_weight_ug=9.9 | |||
|rnaseq_library_id=SRhi10012.CGATGT | |||
|sample_age= | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot=lot:OM042105B | |||
|sample_cell_type= | |||
|sample_collaboration= | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.60729934227118e-222!GO:0005737;cytoplasm;9.96066606829783e-181!GO:0044444;cytoplasmic part;6.69716286826019e-147!GO:0043231;intracellular membrane-bound organelle;3.99135567064911e-145!GO:0043227;membrane-bound organelle;6.41731828014857e-145!GO:0043226;organelle;1.53937062349127e-143!GO:0043229;intracellular organelle;3.48709140089222e-143!GO:0044422;organelle part;3.78318971797245e-103!GO:0044446;intracellular organelle part;8.01247084832322e-102!GO:0005515;protein binding;2.53091122884147e-70!GO:0044237;cellular metabolic process;2.54039472612446e-68!GO:0044238;primary metabolic process;9.51589238745296e-68!GO:0005739;mitochondrion;6.34508126827416e-66!GO:0032991;macromolecular complex;1.42235143259028e-65!GO:0030529;ribonucleoprotein complex;8.41896565699042e-62!GO:0043233;organelle lumen;1.37367372619218e-58!GO:0031974;membrane-enclosed lumen;1.37367372619218e-58!GO:0043170;macromolecule metabolic process;1.71515729825774e-55!GO:0031090;organelle membrane;9.4394208043694e-54!GO:0044428;nuclear part;2.38266592414546e-47!GO:0003723;RNA binding;2.73911947779721e-46!GO:0044429;mitochondrial part;1.4574100463604e-44!GO:0015031;protein transport;1.23818247480877e-41!GO:0019538;protein metabolic process;4.82854235317121e-41!GO:0009058;biosynthetic process;7.08562471168411e-41!GO:0033036;macromolecule localization;5.53934871513118e-40!GO:0005840;ribosome;7.1902225659734e-39!GO:0045184;establishment of protein localization;1.17431996005849e-38!GO:0031967;organelle envelope;1.98144898140311e-38!GO:0031975;envelope;3.24619181594265e-38!GO:0006412;translation;6.78072016619364e-38!GO:0016043;cellular component organization and biogenesis;7.16863532553311e-38!GO:0008104;protein localization;1.34809276309207e-37!GO:0005634;nucleus;8.3444017322936e-37!GO:0044260;cellular macromolecule metabolic process;1.13041990053517e-36!GO:0005829;cytosol;3.3310983149287e-36!GO:0044249;cellular biosynthetic process;1.80156069625121e-35!GO:0044267;cellular protein metabolic process;5.29918144303667e-35!GO:0003735;structural constituent of ribosome;2.80998532813624e-34!GO:0009059;macromolecule biosynthetic process;2.60564752452488e-33!GO:0046907;intracellular transport;1.48989917735521e-32!GO:0043234;protein complex;9.03105705432655e-32!GO:0006396;RNA processing;6.42563136588084e-31!GO:0005740;mitochondrial envelope;3.33211089725797e-30!GO:0033279;ribosomal subunit;1.08075650470646e-29!GO:0031981;nuclear lumen;1.8702905375999e-29!GO:0031966;mitochondrial membrane;4.3231586783705e-29!GO:0006886;intracellular protein transport;6.3635939156523e-28!GO:0005783;endoplasmic reticulum;1.47255929025835e-27!GO:0016071;mRNA metabolic process;3.21898826809597e-27!GO:0019866;organelle inner membrane;3.67822570857966e-26!GO:0010467;gene expression;7.50541891059657e-26!GO:0005743;mitochondrial inner membrane;1.52567216038649e-25!GO:0008380;RNA splicing;5.85171466290957e-25!GO:0043283;biopolymer metabolic process;2.02809203359537e-24!GO:0006397;mRNA processing;5.30506209270389e-23!GO:0012505;endomembrane system;1.02197249984807e-21!GO:0044432;endoplasmic reticulum part;1.95038913569343e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.28994958277924e-21!GO:0065003;macromolecular complex assembly;3.65248751096801e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.57483151991685e-20!GO:0006119;oxidative phosphorylation;1.37403149370484e-19!GO:0006457;protein folding;2.10869644679071e-19!GO:0051649;establishment of cellular localization;2.43295938887824e-19!GO:0051641;cellular localization;2.70979728503564e-19!GO:0022607;cellular component assembly;7.53757602808446e-19!GO:0005654;nucleoplasm;1.69081164474783e-18!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.8221873204324e-18!GO:0044455;mitochondrial membrane part;4.30827346007326e-18!GO:0031980;mitochondrial lumen;5.32037504251894e-18!GO:0005759;mitochondrial matrix;5.32037504251894e-18!GO:0048770;pigment granule;1.03809567097406e-17!GO:0042470;melanosome;1.03809567097406e-17!GO:0005681;spliceosome;3.15089064612828e-17!GO:0051186;cofactor metabolic process;4.8154074074205e-17!GO:0005794;Golgi apparatus;6.88441602237488e-17!GO:0044445;cytosolic part;8.0767377333475e-17!GO:0016874;ligase activity;3.14040211984169e-16!GO:0006996;organelle organization and biogenesis;7.63162874013254e-16!GO:0008134;transcription factor binding;1.06624877402581e-15!GO:0015934;large ribosomal subunit;1.29502203323155e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.82407718501343e-15!GO:0044451;nucleoplasm part;1.93734202470469e-15!GO:0016462;pyrophosphatase activity;2.44374952927523e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.68780834355129e-15!GO:0048193;Golgi vesicle transport;2.68780834355129e-15!GO:0000166;nucleotide binding;3.84754859192121e-15!GO:0015935;small ribosomal subunit;6.83199463716857e-15!GO:0005746;mitochondrial respiratory chain;7.0332554680211e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.06515800377974e-14!GO:0017111;nucleoside-triphosphatase activity;1.14658719867165e-14!GO:0005789;endoplasmic reticulum membrane;3.47542437283835e-14!GO:0051082;unfolded protein binding;4.33779769823713e-14!GO:0006732;coenzyme metabolic process;5.15576046310201e-14!GO:0022618;protein-RNA complex assembly;9.29468736556512e-14!GO:0044248;cellular catabolic process;1.58276680036775e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.76386220399945e-13!GO:0006605;protein targeting;1.95126532941315e-13!GO:0009055;electron carrier activity;2.81845891674977e-13!GO:0016192;vesicle-mediated transport;3.13116187134529e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.21265332824582e-13!GO:0000502;proteasome complex (sensu Eukaryota);4.75654986290322e-13!GO:0006512;ubiquitin cycle;6.05613778430882e-13!GO:0019941;modification-dependent protein catabolic process;6.9026942229404e-13!GO:0043632;modification-dependent macromolecule catabolic process;6.9026942229404e-13!GO:0044265;cellular macromolecule catabolic process;8.56128543139595e-13!GO:0044257;cellular protein catabolic process;8.59168913446638e-13!GO:0006511;ubiquitin-dependent protein catabolic process;8.73113280086737e-13!GO:0043228;non-membrane-bound organelle;8.77772895272654e-13!GO:0043232;intracellular non-membrane-bound organelle;8.77772895272654e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.01388671205972e-12!GO:0003954;NADH dehydrogenase activity;1.01388671205972e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.01388671205972e-12!GO:0008135;translation factor activity, nucleic acid binding;3.09772849895203e-12!GO:0016491;oxidoreductase activity;4.1161998774691e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.32400374332672e-12!GO:0043285;biopolymer catabolic process;5.2121622817244e-12!GO:0005730;nucleolus;6.65596952130382e-12!GO:0005761;mitochondrial ribosome;1.2834563767523e-11!GO:0000313;organellar ribosome;1.2834563767523e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.61005094807257e-11!GO:0042773;ATP synthesis coupled electron transport;2.61005094807257e-11!GO:0030964;NADH dehydrogenase complex (quinone);3.74941583064384e-11!GO:0045271;respiratory chain complex I;3.74941583064384e-11!GO:0005747;mitochondrial respiratory chain complex I;3.74941583064384e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.8212327531265e-11!GO:0008565;protein transporter activity;4.52479390288179e-11!GO:0005793;ER-Golgi intermediate compartment;5.39446030914351e-11!GO:0009057;macromolecule catabolic process;7.7735256884633e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.05730021750037e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.68734742750959e-11!GO:0030163;protein catabolic process;1.03275749425257e-10!GO:0017076;purine nucleotide binding;1.64334114967124e-10!GO:0003712;transcription cofactor activity;1.74085836191617e-10!GO:0006091;generation of precursor metabolites and energy;1.86106458556313e-10!GO:0012501;programmed cell death;2.64740926962309e-10!GO:0005788;endoplasmic reticulum lumen;3.97351812200893e-10!GO:0032553;ribonucleotide binding;5.4530767961888e-10!GO:0032555;purine ribonucleotide binding;5.4530767961888e-10!GO:0006915;apoptosis;5.93999481581234e-10!GO:0048523;negative regulation of cellular process;6.32193394472221e-10!GO:0008219;cell death;7.27106674765569e-10!GO:0016265;death;7.27106674765569e-10!GO:0016070;RNA metabolic process;9.42530463920164e-10!GO:0005635;nuclear envelope;1.72597714556679e-09!GO:0003743;translation initiation factor activity;2.11082186552607e-09!GO:0043412;biopolymer modification;2.82069959633061e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.28503484721597e-09!GO:0006413;translational initiation;5.35864269738849e-09!GO:0003676;nucleic acid binding;5.53501090486937e-09!GO:0045333;cellular respiration;5.90997139373884e-09!GO:0031965;nuclear membrane;7.35576948822301e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.46255673837176e-09!GO:0006446;regulation of translational initiation;8.61139186492972e-09!GO:0005768;endosome;9.2946212995426e-09!GO:0009060;aerobic respiration;9.41920012435284e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.17442594486722e-08!GO:0000375;RNA splicing, via transesterification reactions;1.17442594486722e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.17442594486722e-08!GO:0009259;ribonucleotide metabolic process;1.30362712911806e-08!GO:0006461;protein complex assembly;1.36879495565298e-08!GO:0006464;protein modification process;1.69385824712346e-08!GO:0048519;negative regulation of biological process;2.09246233425425e-08!GO:0019787;small conjugating protein ligase activity;2.75811497239651e-08!GO:0006163;purine nucleotide metabolic process;2.91795459950733e-08!GO:0016604;nuclear body;3.00201610137788e-08!GO:0051187;cofactor catabolic process;3.03346135365676e-08!GO:0009056;catabolic process;3.19929079344099e-08!GO:0009150;purine ribonucleotide metabolic process;3.30839392346293e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.38880643700689e-08!GO:0009109;coenzyme catabolic process;3.67359512310493e-08!GO:0008639;small protein conjugating enzyme activity;4.25454283177714e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.34773939845376e-08!GO:0048475;coated membrane;5.22189430586781e-08!GO:0030117;membrane coat;5.22189430586781e-08!GO:0006366;transcription from RNA polymerase II promoter;5.22189430586781e-08!GO:0015980;energy derivation by oxidation of organic compounds;5.24198161945468e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.25739938287775e-08!GO:0004842;ubiquitin-protein ligase activity;7.02149721161292e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.71115915602928e-08!GO:0009144;purine nucleoside triphosphate metabolic process;7.71115915602928e-08!GO:0006913;nucleocytoplasmic transport;7.73775830717327e-08!GO:0003714;transcription corepressor activity;8.95785565281665e-08!GO:0009141;nucleoside triphosphate metabolic process;8.96819657088751e-08!GO:0016881;acid-amino acid ligase activity;1.11544627048996e-07!GO:0015986;ATP synthesis coupled proton transport;1.28057914482944e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.28057914482944e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.28057914482944e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.28057914482944e-07!GO:0006164;purine nucleotide biosynthetic process;1.3592353839165e-07!GO:0051169;nuclear transport;1.3643674945333e-07!GO:0008654;phospholipid biosynthetic process;1.37126316981507e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.50818248632542e-07!GO:0030120;vesicle coat;1.5621465433392e-07!GO:0030662;coated vesicle membrane;1.5621465433392e-07!GO:0006099;tricarboxylic acid cycle;1.5621465433392e-07!GO:0046356;acetyl-CoA catabolic process;1.5621465433392e-07!GO:0009260;ribonucleotide biosynthetic process;1.67152959932316e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.83712952656527e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.83712952656527e-07!GO:0016564;transcription repressor activity;1.94418732601785e-07!GO:0031988;membrane-bound vesicle;2.01454381454211e-07!GO:0008361;regulation of cell size;2.18730942314268e-07!GO:0016607;nuclear speck;2.18730942314268e-07!GO:0006084;acetyl-CoA metabolic process;2.18730942314268e-07!GO:0007005;mitochondrion organization and biogenesis;2.18730942314268e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.29081907631927e-07!GO:0003924;GTPase activity;2.31405812553288e-07!GO:0044453;nuclear membrane part;2.38885183613682e-07!GO:0044431;Golgi apparatus part;2.52587807530544e-07!GO:0016049;cell growth;2.62880812987692e-07!GO:0051188;cofactor biosynthetic process;3.35014151725988e-07!GO:0006259;DNA metabolic process;4.22901226464959e-07!GO:0030554;adenyl nucleotide binding;4.51354504234145e-07!GO:0016887;ATPase activity;5.17773707668208e-07!GO:0042254;ribosome biogenesis and assembly;5.37727077003297e-07!GO:0017038;protein import;5.83242373845846e-07!GO:0043687;post-translational protein modification;6.15977775613179e-07!GO:0005773;vacuole;6.20320819102569e-07!GO:0019752;carboxylic acid metabolic process;7.31991931171292e-07!GO:0006082;organic acid metabolic process;8.36240437664726e-07!GO:0042623;ATPase activity, coupled;8.37545729387908e-07!GO:0019829;cation-transporting ATPase activity;9.48774105101245e-07!GO:0006399;tRNA metabolic process;9.57890803471508e-07!GO:0046034;ATP metabolic process;9.83628404314853e-07!GO:0032559;adenyl ribonucleotide binding;1.07103081634369e-06!GO:0050794;regulation of cellular process;1.13273379926667e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.1817230790629e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.1817230790629e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.1817230790629e-06!GO:0005524;ATP binding;1.28149193632851e-06!GO:0008610;lipid biosynthetic process;1.2838064188029e-06!GO:0044262;cellular carbohydrate metabolic process;1.33629983202511e-06!GO:0031982;vesicle;1.36750264019537e-06!GO:0005798;Golgi-associated vesicle;1.40128666016505e-06!GO:0043038;amino acid activation;1.52805796525069e-06!GO:0006418;tRNA aminoacylation for protein translation;1.52805796525069e-06!GO:0043039;tRNA aminoacylation;1.52805796525069e-06!GO:0051789;response to protein stimulus;1.6330319434897e-06!GO:0006986;response to unfolded protein;1.6330319434897e-06!GO:0031410;cytoplasmic vesicle;1.71958396151799e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.80875602835767e-06!GO:0006754;ATP biosynthetic process;2.12140553194454e-06!GO:0006753;nucleoside phosphate metabolic process;2.12140553194454e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.12902714906494e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.58928260206735e-06!GO:0019867;outer membrane;2.6266921990654e-06!GO:0001558;regulation of cell growth;2.70314278599719e-06!GO:0031252;leading edge;2.81466337222728e-06!GO:0051246;regulation of protein metabolic process;3.99667020868487e-06!GO:0065002;intracellular protein transport across a membrane;4.01754628316189e-06!GO:0043069;negative regulation of programmed cell death;4.32463552394449e-06!GO:0031968;organelle outer membrane;4.32463552394449e-06!GO:0006752;group transfer coenzyme metabolic process;4.92706365037311e-06!GO:0000323;lytic vacuole;5.24982272822435e-06!GO:0005764;lysosome;5.24982272822435e-06!GO:0030133;transport vesicle;5.33612328359573e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.51782713103197e-06!GO:0005525;GTP binding;5.59283273007197e-06!GO:0043066;negative regulation of apoptosis;7.0988199686554e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.13909216634094e-06!GO:0044440;endosomal part;7.2539377962653e-06!GO:0010008;endosome membrane;7.2539377962653e-06!GO:0006974;response to DNA damage stimulus;7.76875650563116e-06!GO:0032446;protein modification by small protein conjugation;8.27319335030992e-06!GO:0030036;actin cytoskeleton organization and biogenesis;8.59505270799878e-06!GO:0009108;coenzyme biosynthetic process;8.82689739818155e-06!GO:0044255;cellular lipid metabolic process;9.33990462459931e-06!GO:0043067;regulation of programmed cell death;9.36269587612254e-06!GO:0016567;protein ubiquitination;9.36867741672858e-06!GO:0005643;nuclear pore;1.03266207535736e-05!GO:0005770;late endosome;1.03266207535736e-05!GO:0042981;regulation of apoptosis;1.04126129790423e-05!GO:0016853;isomerase activity;1.10336548982875e-05!GO:0006613;cotranslational protein targeting to membrane;1.29303869224419e-05!GO:0045786;negative regulation of progression through cell cycle;1.41143116373829e-05!GO:0005048;signal sequence binding;1.4599623829473e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.58638499141326e-05!GO:0050789;regulation of biological process;1.92162367964439e-05!GO:0000151;ubiquitin ligase complex;2.21764437948538e-05!GO:0009117;nucleotide metabolic process;2.32603430037746e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.44939981144002e-05!GO:0009719;response to endogenous stimulus;2.47017037762837e-05!GO:0045259;proton-transporting ATP synthase complex;2.65666100376903e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.70826040869088e-05!GO:0007049;cell cycle;2.72119403787037e-05!GO:0005741;mitochondrial outer membrane;3.17897400322444e-05!GO:0005791;rough endoplasmic reticulum;3.50507501756168e-05!GO:0006916;anti-apoptosis;3.54985629106197e-05!GO:0032561;guanyl ribonucleotide binding;3.64561745009976e-05!GO:0019001;guanyl nucleotide binding;3.64561745009976e-05!GO:0000139;Golgi membrane;3.69924441948715e-05!GO:0046930;pore complex;3.97887617769278e-05!GO:0005667;transcription factor complex;4.15623453552648e-05!GO:0031324;negative regulation of cellular metabolic process;4.25308766772532e-05!GO:0016859;cis-trans isomerase activity;4.29585213656641e-05!GO:0046474;glycerophospholipid biosynthetic process;4.58771308170621e-05!GO:0045454;cell redox homeostasis;4.73681419658937e-05!GO:0030867;rough endoplasmic reticulum membrane;4.84122457678793e-05!GO:0030029;actin filament-based process;5.37478369262066e-05!GO:0008026;ATP-dependent helicase activity;5.82418611568404e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.10475385219373e-05!GO:0051170;nuclear import;7.51239033604335e-05!GO:0016787;hydrolase activity;7.86581140648471e-05!GO:0004386;helicase activity;8.29654342871868e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.19962708824009e-05!GO:0006629;lipid metabolic process;9.48644572662408e-05!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;9.95497456640395e-05!GO:0004298;threonine endopeptidase activity;0.000118074485576667!GO:0006606;protein import into nucleus;0.000123065686093373!GO:0030532;small nuclear ribonucleoprotein complex;0.000124530905252466!GO:0040008;regulation of growth;0.000125352399493973!GO:0050657;nucleic acid transport;0.000131115315283508!GO:0051236;establishment of RNA localization;0.000131115315283508!GO:0050658;RNA transport;0.000131115315283508!GO:0006403;RNA localization;0.00013249954590983!GO:0007050;cell cycle arrest;0.000132687538941666!GO:0003713;transcription coactivator activity;0.000132748431849949!GO:0051427;hormone receptor binding;0.000134281621325866!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000134456095203103!GO:0000245;spliceosome assembly;0.000138836628609879!GO:0009892;negative regulation of metabolic process;0.000140514424666565!GO:0051726;regulation of cell cycle;0.000150651339029577!GO:0005905;coated pit;0.000167816317723987!GO:0006612;protein targeting to membrane;0.000174488550384718!GO:0000074;regulation of progression through cell cycle;0.00017543684687357!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000213004118857046!GO:0006839;mitochondrial transport;0.00021348100616731!GO:0006979;response to oxidative stress;0.000215469642687643!GO:0005762;mitochondrial large ribosomal subunit;0.000230306291278269!GO:0000315;organellar large ribosomal subunit;0.000230306291278269!GO:0033116;ER-Golgi intermediate compartment membrane;0.000232538932359336!GO:0043566;structure-specific DNA binding;0.000245881003486211!GO:0035257;nuclear hormone receptor binding;0.000246714576558663!GO:0006281;DNA repair;0.000249847999887717!GO:0003697;single-stranded DNA binding;0.000255739888586307!GO:0032787;monocarboxylic acid metabolic process;0.000284284749419108!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000347447408948045!GO:0015399;primary active transmembrane transporter activity;0.000347447408948045!GO:0008092;cytoskeletal protein binding;0.000365640220780889!GO:0004576;oligosaccharyl transferase activity;0.000388613573971591!GO:0048522;positive regulation of cellular process;0.000405979436127892!GO:0046489;phosphoinositide biosynthetic process;0.000406038422962678!GO:0006118;electron transport;0.000407939855892957!GO:0016740;transferase activity;0.000421974360488342!GO:0006364;rRNA processing;0.000428734381031755!GO:0050662;coenzyme binding;0.000451854699577795!GO:0016563;transcription activator activity;0.000495863698490715!GO:0003724;RNA helicase activity;0.000495863698490715!GO:0030663;COPI coated vesicle membrane;0.000499770884736817!GO:0030126;COPI vesicle coat;0.000499770884736817!GO:0046467;membrane lipid biosynthetic process;0.000501030772543442!GO:0006650;glycerophospholipid metabolic process;0.000511254276897765!GO:0008250;oligosaccharyl transferase complex;0.000522490613831264!GO:0005769;early endosome;0.000534114060696185!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000550600736029959!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000551752787582616!GO:0016044;membrane organization and biogenesis;0.00055328887142436!GO:0005885;Arp2/3 protein complex;0.000622554636306084!GO:0043021;ribonucleoprotein binding;0.000634812122308377!GO:0030137;COPI-coated vesicle;0.000648734399116247!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000741222872564731!GO:0051287;NAD binding;0.000741225059793175!GO:0016072;rRNA metabolic process;0.000757448108870136!GO:0006793;phosphorus metabolic process;0.00087008309848079!GO:0006796;phosphate metabolic process;0.00087008309848079!GO:0006891;intra-Golgi vesicle-mediated transport;0.00087008309848079!GO:0051920;peroxiredoxin activity;0.00104483668453676!GO:0016126;sterol biosynthetic process;0.00105116083121253!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00111266138072191!GO:0000314;organellar small ribosomal subunit;0.00117943980320437!GO:0005763;mitochondrial small ribosomal subunit;0.00117943980320437!GO:0007243;protein kinase cascade;0.00119051461263758!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00119296881615785!GO:0043284;biopolymer biosynthetic process;0.00120179585766813!GO:0043623;cellular protein complex assembly;0.00142200883770639!GO:0035258;steroid hormone receptor binding;0.00142499236572283!GO:0018196;peptidyl-asparagine modification;0.00142499236572283!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00142499236572283!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00149572530641175!GO:0030027;lamellipodium;0.00154565481499181!GO:0051028;mRNA transport;0.00155468334506837!GO:0006635;fatty acid beta-oxidation;0.00161427196609113!GO:0022402;cell cycle process;0.00170970672677155!GO:0065007;biological regulation;0.00179828204679695!GO:0048037;cofactor binding;0.00179974675473834!GO:0016310;phosphorylation;0.00182788309099066!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00187908311518522!GO:0016481;negative regulation of transcription;0.00197728088462267!GO:0006631;fatty acid metabolic process;0.00208057613593138!GO:0016779;nucleotidyltransferase activity;0.00214931837341112!GO:0048471;perinuclear region of cytoplasm;0.00219871787252227!GO:0045792;negative regulation of cell size;0.00223120232091192!GO:0006892;post-Golgi vesicle-mediated transport;0.00223851763872909!GO:0051540;metal cluster binding;0.00225181628969632!GO:0051536;iron-sulfur cluster binding;0.00225181628969632!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00226605684533365!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00226605684533365!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00226605684533365!GO:0000096;sulfur amino acid metabolic process;0.00226699371246787!GO:0043681;protein import into mitochondrion;0.00230723762167179!GO:0030521;androgen receptor signaling pathway;0.00247315718461605!GO:0030118;clathrin coat;0.00254145826345016!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00254599331392851!GO:0007264;small GTPase mediated signal transduction;0.00264284305796184!GO:0030308;negative regulation of cell growth;0.00271686946580388!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00272315476330009!GO:0015992;proton transport;0.00275589622250665!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0027873818423381!GO:0048468;cell development;0.00284920147517785!GO:0019899;enzyme binding;0.00297862337547548!GO:0006818;hydrogen transport;0.00299162643515496!GO:0006790;sulfur metabolic process;0.00305019490041672!GO:0001726;ruffle;0.00305524073133143!GO:0043492;ATPase activity, coupled to movement of substances;0.00315242975264777!GO:0030518;steroid hormone receptor signaling pathway;0.00316167572148107!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00322842932743465!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00329550324053774!GO:0030176;integral to endoplasmic reticulum membrane;0.00334787553423802!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00339146988364249!GO:0030384;phosphoinositide metabolic process;0.00340773389983613!GO:0016197;endosome transport;0.00342228273795183!GO:0048500;signal recognition particle;0.00342228273795183!GO:0022890;inorganic cation transmembrane transporter activity;0.00350392266287684!GO:0042158;lipoprotein biosynthetic process;0.00353335230790823!GO:0004177;aminopeptidase activity;0.00362987937271126!GO:0007006;mitochondrial membrane organization and biogenesis;0.00369365776682265!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00388881474576436!GO:0006626;protein targeting to mitochondrion;0.00396780677388649!GO:0019843;rRNA binding;0.0039997445886257!GO:0006695;cholesterol biosynthetic process;0.00406159994431104!GO:0006643;membrane lipid metabolic process;0.00410485260932978!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00424962071773229!GO:0003779;actin binding;0.0043791261275057!GO:0046483;heterocycle metabolic process;0.00448231763705686!GO:0009165;nucleotide biosynthetic process;0.00459470802914063!GO:0006066;alcohol metabolic process;0.00459849696601329!GO:0008186;RNA-dependent ATPase activity;0.00460058862241737!GO:0030658;transport vesicle membrane;0.00471327681457675!GO:0006497;protein amino acid lipidation;0.0050867581949814!GO:0006414;translational elongation;0.0050867581949814!GO:0007040;lysosome organization and biogenesis;0.00511077534534508!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0051779086116351!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00520725205864982!GO:0030132;clathrin coat of coated pit;0.00525186466897454!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00536203604547517!GO:0031902;late endosome membrane;0.00543857258236798!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00548915363531082!GO:0051128;regulation of cellular component organization and biogenesis;0.00565264158394144!GO:0005975;carbohydrate metabolic process;0.00569676058318976!GO:0006644;phospholipid metabolic process;0.0057434760097177!GO:0048487;beta-tubulin binding;0.00576345260619309!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00577137462372484!GO:0031072;heat shock protein binding;0.00579247709149703!GO:0006693;prostaglandin metabolic process;0.00583209883566103!GO:0006692;prostanoid metabolic process;0.00583209883566103!GO:0000902;cell morphogenesis;0.00583209883566103!GO:0032989;cellular structure morphogenesis;0.00583209883566103!GO:0030134;ER to Golgi transport vesicle;0.00583448434762083!GO:0003729;mRNA binding;0.00584962776855927!GO:0044438;microbody part;0.00594788589921845!GO:0044439;peroxisomal part;0.00594788589921845!GO:0005774;vacuolar membrane;0.00604876487725976!GO:0019318;hexose metabolic process;0.00608395146489045!GO:0008139;nuclear localization sequence binding;0.00614952838188047!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00614952838188047!GO:0045047;protein targeting to ER;0.00614952838188047!GO:0045045;secretory pathway;0.00633439930366485!GO:0006506;GPI anchor biosynthetic process;0.00634820823122007!GO:0033673;negative regulation of kinase activity;0.00638247052554262!GO:0006469;negative regulation of protein kinase activity;0.00638247052554262!GO:0007010;cytoskeleton organization and biogenesis;0.00640380315320399!GO:0006509;membrane protein ectodomain proteolysis;0.00658104332927065!GO:0033619;membrane protein proteolysis;0.00658104332927065!GO:0030127;COPII vesicle coat;0.00663208823737713!GO:0012507;ER to Golgi transport vesicle membrane;0.00663208823737713!GO:0005777;peroxisome;0.00677196409405388!GO:0042579;microbody;0.00677196409405388!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00706302550824365!GO:0016568;chromatin modification;0.00726522091642021!GO:0050811;GABA receptor binding;0.00764957454720005!GO:0006950;response to stress;0.00844354670233493!GO:0005869;dynactin complex;0.00845807300309988!GO:0008652;amino acid biosynthetic process;0.00846650225219226!GO:0005996;monosaccharide metabolic process;0.0084987360946664!GO:0003899;DNA-directed RNA polymerase activity;0.00862893041473545!GO:0006352;transcription initiation;0.00871618319099312!GO:0051252;regulation of RNA metabolic process;0.00875059195496793!GO:0016125;sterol metabolic process;0.00878708538094485!GO:0031903;microbody membrane;0.00889342267866634!GO:0005778;peroxisomal membrane;0.00889342267866634!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00889342267866634!GO:0015002;heme-copper terminal oxidase activity;0.00889342267866634!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00889342267866634!GO:0004129;cytochrome-c oxidase activity;0.00889342267866634!GO:0048518;positive regulation of biological process;0.00889733352102438!GO:0051348;negative regulation of transferase activity;0.00927898703669553!GO:0065004;protein-DNA complex assembly;0.00931914969661086!GO:0006505;GPI anchor metabolic process;0.00957280725466484!GO:0050681;androgen receptor binding;0.00964893012540766!GO:0043488;regulation of mRNA stability;0.00964893012540766!GO:0043487;regulation of RNA stability;0.00964893012540766!GO:0051168;nuclear export;0.00976025424283144!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00988205260600201!GO:0017166;vinculin binding;0.0103342787922191!GO:0004004;ATP-dependent RNA helicase activity;0.0105695904952086!GO:0030880;RNA polymerase complex;0.0105962623834419!GO:0019222;regulation of metabolic process;0.0106482974678139!GO:0005583;fibrillar collagen;0.0106482974678139!GO:0007034;vacuolar transport;0.010737589830667!GO:0016408;C-acyltransferase activity;0.01080946603908!GO:0007160;cell-matrix adhesion;0.01080946603908!GO:0005813;centrosome;0.01080946603908!GO:0016363;nuclear matrix;0.0108154584428313!GO:0051087;chaperone binding;0.0108306343325324!GO:0008320;protein transmembrane transporter activity;0.0109095809872384!GO:0006402;mRNA catabolic process;0.0109872460980426!GO:0008312;7S RNA binding;0.0110005671656976!GO:0007033;vacuole organization and biogenesis;0.011013807710957!GO:0051539;4 iron, 4 sulfur cluster binding;0.0113942708683866!GO:0043433;negative regulation of transcription factor activity;0.0115507724290439!GO:0045926;negative regulation of growth;0.0116713361939853!GO:0006383;transcription from RNA polymerase III promoter;0.0118068544340316!GO:0006006;glucose metabolic process;0.0120376614331969!GO:0006740;NADPH regeneration;0.0121012160234849!GO:0006098;pentose-phosphate shunt;0.0121012160234849!GO:0031589;cell-substrate adhesion;0.0124565742033534!GO:0065009;regulation of a molecular function;0.0127638932908483!GO:0030659;cytoplasmic vesicle membrane;0.0128305163099658!GO:0030660;Golgi-associated vesicle membrane;0.0129600889575343!GO:0044420;extracellular matrix part;0.0133877707318739!GO:0030522;intracellular receptor-mediated signaling pathway;0.0136394438208262!GO:0003690;double-stranded DNA binding;0.0141517414072089!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0144307158978446!GO:0006325;establishment and/or maintenance of chromatin architecture;0.0145328874187811!GO:0005765;lysosomal membrane;0.0145328874187811!GO:0005862;muscle thin filament tropomyosin;0.0148312499584917!GO:0033559;unsaturated fatty acid metabolic process;0.015040943847896!GO:0006636;unsaturated fatty acid biosynthetic process;0.015040943847896!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0151882062893578!GO:0016860;intramolecular oxidoreductase activity;0.0156845081173373!GO:0044437;vacuolar part;0.0156845081173373!GO:0030119;AP-type membrane coat adaptor complex;0.0157352627415288!GO:0009967;positive regulation of signal transduction;0.0159616748747212!GO:0016251;general RNA polymerase II transcription factor activity;0.0160048636973425!GO:0001527;microfibril;0.0160048636973425!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0164787670580743!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0164787670580743!GO:0045892;negative regulation of transcription, DNA-dependent;0.0167589367349506!GO:0003746;translation elongation factor activity;0.0168092974702539!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0168908920707441!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0171210817176207!GO:0006749;glutathione metabolic process;0.0171210817176207!GO:0003711;transcription elongation regulator activity;0.0174642771415823!GO:0030145;manganese ion binding;0.0175545146970075!GO:0019395;fatty acid oxidation;0.0177656691547205!GO:0006739;NADP metabolic process;0.0180898740696739!GO:0005581;collagen;0.0181795960080301!GO:0008180;signalosome;0.0182295586036499!GO:0031901;early endosome membrane;0.0183934201243623!GO:0043086;negative regulation of catalytic activity;0.0184314748847922!GO:0000097;sulfur amino acid biosynthetic process;0.0185663203921741!GO:0005586;collagen type III;0.0186401125925029!GO:0030041;actin filament polymerization;0.0188160649074001!GO:0005815;microtubule organizing center;0.0189799428671856!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0191567851464535!GO:0000428;DNA-directed RNA polymerase complex;0.0191567851464535!GO:0030503;regulation of cell redox homeostasis;0.0201730508859563!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0204110359857941!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0204110359857941!GO:0000059;protein import into nucleus, docking;0.0204110359857941!GO:0006260;DNA replication;0.0206971540298066!GO:0031406;carboxylic acid binding;0.0210230509140001!GO:0006984;ER-nuclear signaling pathway;0.0211044540390536!GO:0045893;positive regulation of transcription, DNA-dependent;0.0211869462972209!GO:0006897;endocytosis;0.0214572701078098!GO:0010324;membrane invagination;0.0214572701078098!GO:0035035;histone acetyltransferase binding;0.0217788220493676!GO:0044433;cytoplasmic vesicle part;0.0218966021441149!GO:0005595;collagen type XII;0.0218966021441149!GO:0000339;RNA cap binding;0.0229081713078643!GO:0012506;vesicle membrane;0.0230818699971732!GO:0006323;DNA packaging;0.0232141215842387!GO:0006607;NLS-bearing substrate import into nucleus;0.0236190563582854!GO:0046519;sphingoid metabolic process;0.0237378154269315!GO:0008154;actin polymerization and/or depolymerization;0.0242166225020404!GO:0008147;structural constituent of bone;0.0246798572617728!GO:0030131;clathrin adaptor complex;0.0247834629013472!GO:0051329;interphase of mitotic cell cycle;0.0247879016919965!GO:0050750;low-density lipoprotein receptor binding;0.024939156359485!GO:0000049;tRNA binding;0.0252048478220751!GO:0005520;insulin-like growth factor binding;0.0252751500178502!GO:0007041;lysosomal transport;0.0268131918148412!GO:0046394;carboxylic acid biosynthetic process;0.0270568233463467!GO:0016053;organic acid biosynthetic process;0.0270568233463467!GO:0006633;fatty acid biosynthetic process;0.0271269323696529!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0272892180720211!GO:0051325;interphase;0.0284909985046213!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0287270891168027!GO:0000209;protein polyubiquitination;0.0288879425212558!GO:0031625;ubiquitin protein ligase binding;0.0289230898367821!GO:0005801;cis-Golgi network;0.0306012747688605!GO:0001872;zymosan binding;0.0306536958120668!GO:0001878;response to yeast;0.0306536958120668!GO:0043022;ribosome binding;0.0313865791408533!GO:0006595;polyamine metabolic process;0.0314156912963045!GO:0031418;L-ascorbic acid binding;0.0321184245351186!GO:0051098;regulation of binding;0.0328204423571468!GO:0006778;porphyrin metabolic process;0.0328786708198682!GO:0033013;tetrapyrrole metabolic process;0.0328786708198682!GO:0003988;acetyl-CoA C-acyltransferase activity;0.033331858704312!GO:0001725;stress fiber;0.0334414643923872!GO:0032432;actin filament bundle;0.0334414643923872!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0334414643923872!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0340090781244652!GO:0051101;regulation of DNA binding;0.0342181280562879!GO:0022408;negative regulation of cell-cell adhesion;0.0349450650122933!GO:0008415;acyltransferase activity;0.0352113081673382!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0355060824184974!GO:0045941;positive regulation of transcription;0.0355150418052182!GO:0005832;chaperonin-containing T-complex;0.0355798286687883!GO:0045936;negative regulation of phosphate metabolic process;0.0363076679836497!GO:0032984;macromolecular complex disassembly;0.0366577945782729!GO:0015630;microtubule cytoskeleton;0.0368478040819555!GO:0030125;clathrin vesicle coat;0.0378209107942127!GO:0030665;clathrin coated vesicle membrane;0.0378209107942127!GO:0006354;RNA elongation;0.0379097709202137!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0382548861590922!GO:0007030;Golgi organization and biogenesis;0.0389945180292822!GO:0030508;thiol-disulfide exchange intermediate activity;0.039586249090409!GO:0032940;secretion by cell;0.0403766487130595!GO:0031529;ruffle organization and biogenesis;0.0403820845390325!GO:0015923;mannosidase activity;0.0406539531772863!GO:0030140;trans-Golgi network transport vesicle;0.0410131310683578!GO:0000030;mannosyltransferase activity;0.0416934748692571!GO:0003923;GPI-anchor transamidase activity;0.0417100911373706!GO:0016255;attachment of GPI anchor to protein;0.0417100911373706!GO:0042765;GPI-anchor transamidase complex;0.0417100911373706!GO:0000082;G1/S transition of mitotic cell cycle;0.0418712077567623!GO:0009112;nucleobase metabolic process;0.0435714737765714!GO:0001516;prostaglandin biosynthetic process;0.0437034615150244!GO:0046457;prostanoid biosynthetic process;0.0437034615150244!GO:0006672;ceramide metabolic process;0.0442982415968769!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0444345687663865!GO:0007021;tubulin folding;0.0453140224456461!GO:0008203;cholesterol metabolic process;0.0454134804240273!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0454837644502651!GO:0016272;prefoldin complex;0.0460588965632417!GO:0005784;translocon complex;0.0471609967073642!GO:0000287;magnesium ion binding;0.0477888800157376!GO:0006767;water-soluble vitamin metabolic process;0.0486085009889308!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0487589018440164!GO:0015631;tubulin binding;0.0492321387066653 | |||
|sample_id=11473 | |||
|sample_note= | |||
|sample_sex= | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue= | |||
|top_motifs=IKZF1:2.56973078124;GZF1:2.44935904462;SRF:2.0620361035;EBF1:2.03559188307;MYBL2:2.00408596847;HIF1A:2.00178844074;TEF:1.90890462459;HES1:1.87989008662;FOXL1:1.86628049992;MAFB:1.85194849542;HMGA1,2:1.75450211178;NKX3-1:1.68839623809;TEAD1:1.6744233037;ZNF238:1.66105551654;NR3C1:1.65621617312;GCM1,2:1.63831487074;SMAD1..7,9:1.62722417001;XBP1:1.62060583572;ATF6:1.61613125656;FOXO1,3,4:1.53904364618;RXRA_VDR{dimer}:1.49025090435;TAL1_TCF{3,4,12}:1.45142461236;UFEwm:1.44446317247;NKX2-2,8:1.381149845;ESR1:1.3597800941;NFE2L1:1.3531667175;NFATC1..3:1.34590293762;NKX2-1,4:1.30918779801;ZNF423:1.30556032344;TLX1..3_NFIC{dimer}:1.28151411265;HOX{A5,B5}:1.27635824669;GLI1..3:1.27370420603;EVI1:1.27365798175;SPZ1:1.25702818364;HOX{A6,A7,B6,B7}:1.19339508726;TFAP4:1.19188925701;KLF4:1.11812595654;NHLH1,2:1.11319172169;MTE{core}:1.11277903394;MAZ:1.11261491236;AR:1.08864101019;TP53:1.07744022001;LHX3,4:1.07735339435;DBP:1.07161682948;HSF1,2:1.03701156296;NFIX:0.973030912043;HOX{A4,D4}:0.950631694511;GTF2I:0.895094524407;MTF1:0.800393448396;GATA4:0.758536187057;CDC5L:0.732787187157;bHLH_family:0.722831184322;HMX1:0.717769106334;TFAP2{A,C}:0.717395799311;TFCP2:0.700391116728;GTF2A1,2:0.66993205707;HIC1:0.665809500798;ESRRA:0.645043852218;FOXA2:0.631543816002;ZNF148:0.631092784529;PAX1,9:0.625626857497;STAT1,3:0.622686959149;MYFfamily:0.599619249793;STAT2,4,6:0.59053424145;SOX5:0.584304330327;ALX4:0.576871276801;PAX5:0.557398470974;MZF1:0.555905713276;EN1,2:0.551132826377;HAND1,2:0.54731615727;ARID5B:0.524200507775;PATZ1:0.51900596582;NR6A1:0.509530109723;TFAP2B:0.505907849888;HBP1_HMGB_SSRP1_UBTF:0.48047193298;RXR{A,B,G}:0.437668855108;TBP:0.435112431718;POU6F1:0.424788293588;MEF2{A,B,C,D}:0.408969757838;HLF:0.403544402892;TBX4,5:0.399380907619;NANOG{mouse}:0.395092306997;PAX6:0.345637634907;GFI1B:0.34464498359;NKX3-2:0.299590066403;NFE2L2:0.289722550881;ZNF384:0.287017896764;FOX{D1,D2}:0.281410636771;TGIF1:0.273199201754;HNF4A_NR2F1,2:0.262057860927;PAX4:0.175601132696;SOX17:0.160499896184;CEBPA,B_DDIT3:0.141584728319;ADNP_IRX_SIX_ZHX:0.117353186756;ZBTB6:0.112263607582;SREBF1,2:0.112058003734;FOXP3:0.0874311121791;AHR_ARNT_ARNT2:0.0812255489559;FOX{I1,J2}:0.0595079028519;HNF1A:0.0577348095703;REST:0.0363709491324;FOXD3:0.0134816184369;PRDM1:-0.000475677042322;NR1H4:-0.000893450415027;ELK1,4_GABP{A,B1}:-0.00451312622879;HOXA9_MEIS1:-0.0381355748044;AIRE:-0.0510872513604;IRF1,2:-0.0549779545047;POU3F1..4:-0.0900009051298;ZNF143:-0.0947063426106;MED-1{core}:-0.0949992419781;TLX2:-0.134539849108;ATF2:-0.138497814517;MYB:-0.153221964729;NFIL3:-0.154857899347;NRF1:-0.170306673084;XCPE1{core}:-0.174751233601;EGR1..3:-0.198584052603;RREB1:-0.201550417926;YY1:-0.208548809587;BACH2:-0.214462423758;SOX2:-0.221559683784;EP300:-0.227895956695;SP1:-0.232533944941;STAT5{A,B}:-0.234818940363;JUN:-0.243742408251;ZIC1..3:-0.251108125233;PPARG:-0.262767560736;NKX6-1,2:-0.298540735738;FOSL2:-0.30189749117;T:-0.337415846671;PAX2:-0.379965806674;PAX3,7:-0.381636730966;DMAP1_NCOR{1,2}_SMARC:-0.390138517424;NFE2:-0.393456095863;ATF5_CREB3:-0.39596387617;FOS_FOS{B,L1}_JUN{B,D}:-0.398416584803;GFI1:-0.411786597097;CRX:-0.414534778383;ZFP161:-0.423333036843;PRRX1,2:-0.434250338461;ETS1,2:-0.45776758402;TOPORS:-0.462809744005;ATF4:-0.47307711397;ZBTB16:-0.483658336385;RFX1:-0.495131544244;ELF1,2,4:-0.505359299824;FOXM1:-0.532998513745;IKZF2:-0.550719555214;BREu{core}:-0.567608082127;FOXN1:-0.570333806493;IRF7:-0.573876644269;RUNX1..3:-0.579811979812;NFKB1_REL_RELA:-0.599385710722;TFDP1:-0.599470465525;BPTF:-0.608832576942;SPI1:-0.620241762801;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.633329516314;CREB1:-0.656883853213;RBPJ:-0.659002808292;SPIB:-0.705293092049;POU5F1:-0.713565197464;NR5A1,2:-0.731685108353;ONECUT1,2:-0.750315890913;GATA6:-0.76651980286;RFX2..5_RFXANK_RFXAP:-0.784964915264;NKX2-3_NKX2-5:-0.78605426468;RORA:-0.795083675413;NANOG:-0.811594033205;FOXP1:-0.829598301067;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.866580441821;NFY{A,B,C}:-0.880237959338;VSX1,2:-0.88085400778;PAX8:-0.910544152673;LMO2:-0.936265690199;OCT4_SOX2{dimer}:-0.974042873141;FOX{F1,F2,J1}:-0.980809229382;LEF1_TCF7_TCF7L1,2:-0.985646753826;SNAI1..3:-0.999176341906;CUX2:-1.00259672917;POU1F1:-1.05357405281;PITX1..3:-1.07525139958;ZEB1:-1.10259353233;E2F1..5:-1.17217268802;CDX1,2,4:-1.23871676119;PDX1:-1.27876702773;SOX{8,9,10}:-1.28761172313;PBX1:-1.38924763916;FOXQ1:-1.42088620778;MYOD1:-1.49606461583;ALX1:-1.98251304133;POU2F1..3:-2.0045810072 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11473-119C6;search_select_hide=table117:FF:11473-119C6 | |||
}} | }} | ||
Latest revision as of 18:03, 4 June 2020
| Name: | Adipocyte - omental, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11054 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11054
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11054
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.212 |
| 10 | 10 | 0.586 |
| 100 | 100 | 0.917 |
| 101 | 101 | 0.46 |
| 102 | 102 | 0.0154 |
| 103 | 103 | 0.977 |
| 104 | 104 | 0.873 |
| 105 | 105 | 0.111 |
| 106 | 106 | 0.671 |
| 107 | 107 | 0.552 |
| 108 | 108 | 0.491 |
| 109 | 109 | 0.25 |
| 11 | 11 | 0.258 |
| 110 | 110 | 0.451 |
| 111 | 111 | 0.581 |
| 112 | 112 | 0.824 |
| 113 | 113 | 0.0605 |
| 114 | 114 | 0.759 |
| 115 | 115 | 0.0604 |
| 116 | 116 | 0.349 |
| 117 | 117 | 0.135 |
| 118 | 118 | 0.054 |
| 119 | 119 | 0.0672 |
| 12 | 12 | 0.607 |
| 120 | 120 | 0.306 |
| 121 | 121 | 0.615 |
| 122 | 122 | 0.255 |
| 123 | 123 | 0.0083 |
| 124 | 124 | 0.587 |
| 125 | 125 | 0.157 |
| 126 | 126 | 0.53 |
| 127 | 127 | 0.0826 |
| 128 | 128 | 0.692 |
| 129 | 129 | 0.888 |
| 13 | 13 | 0.315 |
| 130 | 130 | 0.392 |
| 131 | 131 | 0.11 |
| 132 | 132 | 0.475 |
| 133 | 133 | 0.522 |
| 134 | 134 | 0.303 |
| 135 | 135 | 0.575 |
| 136 | 136 | 0.449 |
| 137 | 137 | 0.742 |
| 138 | 138 | 0.167 |
| 139 | 139 | 0.811 |
| 14 | 14 | 0.246 |
| 140 | 140 | 0.17 |
| 141 | 141 | 0.466 |
| 142 | 142 | 0.382 |
| 143 | 143 | 0.278 |
| 144 | 144 | 0.936 |
| 145 | 145 | 0.19 |
| 146 | 146 | 0.998 |
| 147 | 147 | 0.255 |
| 148 | 148 | 0.93 |
| 149 | 149 | 6.02375e-4 |
| 15 | 15 | 0.551 |
| 150 | 150 | 0.766 |
| 151 | 151 | 0.778 |
| 152 | 152 | 0.0677 |
| 153 | 153 | 0.127 |
| 154 | 154 | 0.593 |
| 155 | 155 | 0.017 |
| 156 | 156 | 0.186 |
| 157 | 157 | 0.698 |
| 158 | 158 | 0.00148 |
| 159 | 159 | 0.493 |
| 16 | 16 | 0.0468 |
| 160 | 160 | 0.775 |
| 161 | 161 | 0.122 |
| 162 | 162 | 0.513 |
| 163 | 163 | 0.0486 |
| 164 | 164 | 0.754 |
| 165 | 165 | 0.704 |
| 166 | 166 | 0.0847 |
| 167 | 167 | 0.274 |
| 168 | 168 | 0.864 |
| 169 | 169 | 0.0736 |
| 17 | 17 | 0.661 |
| 18 | 18 | 0.767 |
| 19 | 19 | 0.0233 |
| 2 | 2 | 0.161 |
| 20 | 20 | 0.204 |
| 21 | 21 | 0.606 |
| 22 | 22 | 0.344 |
| 23 | 23 | 0.464 |
| 24 | 24 | 0.358 |
| 25 | 25 | 0.307 |
| 26 | 26 | 0.341 |
| 27 | 27 | 0.814 |
| 28 | 28 | 0.169 |
| 29 | 29 | 0.113 |
| 3 | 3 | 0.742 |
| 30 | 30 | 0.285 |
| 31 | 31 | 0.951 |
| 32 | 32 | 6.27981e-12 |
| 33 | 33 | 0.511 |
| 34 | 34 | 0.919 |
| 35 | 35 | 0.748 |
| 36 | 36 | 0.0782 |
| 37 | 37 | 0.627 |
| 38 | 38 | 0.272 |
| 39 | 39 | 0.108 |
| 4 | 4 | 0.39 |
| 40 | 40 | 0.0802 |
| 41 | 41 | 0.759 |
| 42 | 42 | 0.3 |
| 43 | 43 | 0.839 |
| 44 | 44 | 0.774 |
| 45 | 45 | 0.84 |
| 46 | 46 | 0.411 |
| 47 | 47 | 0.44 |
| 48 | 48 | 0.37 |
| 49 | 49 | 0.398 |
| 5 | 5 | 0.486 |
| 50 | 50 | 0.696 |
| 51 | 51 | 0.398 |
| 52 | 52 | 0.614 |
| 53 | 53 | 0.146 |
| 54 | 54 | 0.842 |
| 55 | 55 | 0.64 |
| 56 | 56 | 0.311 |
| 57 | 57 | 0.76 |
| 58 | 58 | 0.415 |
| 59 | 59 | 0.431 |
| 6 | 6 | 0.541 |
| 60 | 60 | 0.954 |
| 61 | 61 | 0.221 |
| 62 | 62 | 0.427 |
| 63 | 63 | 0.884 |
| 64 | 64 | 0.232 |
| 65 | 65 | 0.773 |
| 66 | 66 | 0.142 |
| 67 | 67 | 0.673 |
| 68 | 68 | 0.916 |
| 69 | 69 | 0.736 |
| 7 | 7 | 0.386 |
| 70 | 70 | 0.673 |
| 71 | 71 | 0.73 |
| 72 | 72 | 0.358 |
| 73 | 73 | 0.139 |
| 74 | 74 | 0.347 |
| 75 | 75 | 0.515 |
| 76 | 76 | 0.201 |
| 77 | 77 | 0.155 |
| 78 | 78 | 0.271 |
| 79 | 79 | 0.257 |
| 8 | 8 | 0.47 |
| 80 | 80 | 0.601 |
| 81 | 81 | 0.846 |
| 82 | 82 | 0.898 |
| 83 | 83 | 0.649 |
| 84 | 84 | 0.0987 |
| 85 | 85 | 0.0677 |
| 86 | 86 | 0.414 |
| 87 | 87 | 0.273 |
| 88 | 88 | 0.684 |
| 89 | 89 | 0.456 |
| 9 | 9 | 0.391 |
| 90 | 90 | 0.891 |
| 91 | 91 | 0.384 |
| 92 | 92 | 0.344 |
| 93 | 93 | 0.964 |
| 94 | 94 | 0.423 |
| 95 | 95 | 0.494 |
| 96 | 96 | 0.838 |
| 97 | 97 | 0.288 |
| 98 | 98 | 0.231 |
| 99 | 99 | 0.0689 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11054
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000039 human adipocyte of omentum tissue sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
0002615 (adipocyte of omentum tissue)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000039 (human adipocyte of omentum tissue sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
