Personal tools

FFCP PHASE1:Mm9::chr10:7552212..7552252,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:7552212..7552252,+
|DHSsupport=NA
|short_description=p1@Zc3h12d
|DPIdataset=NA
|description=CAGE_peak_1_at_Zc3h12d_5end
|association_with_transcript=-15bp_to_ENSMUST00000039484,ENSMUST00000163689,NM_172785,uc007eiq.2_5end
|EntrezGene=237256
|EntrezGene=237256
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9QNR7,E9Q3F1,Q8BIY3
|UniProt=E9QNR7,E9Q3F1,Q8BIY3
|association_with_transcript=-15bp_to_ENSMUST00000039484,ENSMUST00000163689,NM_172785,uc007eiq.2_5end
|cluster_id=chr10:7552212..7552252,+
|description=CAGE_peak_1_at_Zc3h12d_5end
|id=chr10:7552212..7552252,+
|ontology_enrichment_celltype=CL:0000791!3.00e-07!9;CL:0000789!3.00e-07!9;CL:0002420!3.00e-07!9;CL:0002419!3.00e-07!9;CL:0000790!3.00e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002031,6.58e-10,25;CL:0000791,1.63e-09,9;CL:0000789,1.63e-09,9;CL:0002420,1.63e-09,9;CL:0002419,1.63e-09,9;CL:0000790,1.63e-09,9;CL:0000624,1.42e-08,8;CL:0000738,2.26e-08,17;CL:0002087,2.26e-08,17;CL:0000838,4.78e-08,12;CL:0002563,2.50e-07,9;CL:0002251,2.50e-07,9;CL:0000084,3.27e-07,11;CL:0000827,3.27e-07,11;CL:0000542,3.68e-07,13;CL:0000051,3.68e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!1.65e-19!128;UBERON:0001555!1.65e-19!128;UBERON:0007026!1.65e-19!128;UBERON:0004119!4.56e-19!130;UBERON:0000925!4.56e-19!130;UBERON:0006595!4.56e-19!130;UBERON:0004921!1.87e-18!126;UBERON:0004185!1.87e-18!126;UBERON:0002405!7.21e-14!70;UBERON:0002193!1.60e-13!48;UBERON:0002390!7.09e-12!45;UBERON:0003061!7.09e-12!45;UBERON:0005911!3.45e-11!69;UBERON:0003929!8.14e-11!55;UBERON:0004923!5.81e-10!24;UBERON:0005409!1.99e-09!59;UBERON:0005057!2.55e-09!51;UBERON:0004177!2.93e-09!29;UBERON:0001041!7.97e-09!92;UBERON:0000077!1.39e-08!97;UBERON:0000344!1.44e-08!15;UBERON:0000490!3.14e-08!66;UBERON:0000160!7.78e-08!43;UBERON:0001242!1.37e-07!13;UBERON:0000060!1.37e-07!13;UBERON:0001262!1.37e-07!13;UBERON:0004786!1.37e-07!13;UBERON:0003408!2.36e-07!24;UBERON:0006562!5.07e-07!24;UBERON:0001557!5.07e-07!24;UBERON:0001042!5.07e-07!24;UBERON:0008814!5.07e-07!24;UBERON:0009145!5.07e-07!24;UBERON:0002370!5.75e-07!23;UBERON:0000974!5.75e-07!23;UBERON:0004807!5.75e-07!23;UBERON:0005058!5.75e-07!23;UBERON:0003351!5.75e-07!23;UBERON:0009113!5.75e-07!23;UBERON:0003295!5.75e-07!23;UBERON:0009722!5.75e-07!23;UBERON:0005562!5.75e-07!23;UBERON:0007690!5.75e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.17e-20,116;UBERON:0001555,6.17e-20,116;UBERON:0007026,6.17e-20,116;UBERON:0002193,2.95e-19,48;UBERON:0002405,2.95e-19,48;UBERON:0004119,3.33e-19,118;UBERON:0000925,3.33e-19,118;UBERON:0006595,3.33e-19,118;UBERON:0004921,1.21e-18,114;UBERON:0002390,6.53e-17,45;UBERON:0003061,6.53e-17,45;UBERON:0004923,5.17e-13,24;UBERON:0000160,6.59e-13,31;UBERON:0005911,1.12e-12,69;UBERON:0004177,2.55e-12,29;UBERON:0005057,2.55e-12,29;UBERON:0003929,3.45e-12,55;UBERON:0005409,1.40e-11,47;UBERON:0000344,2.39e-11,15;UBERON:0000490,2.63e-10,66;UBERON:0001242,5.50e-10,13;UBERON:0001262,5.50e-10,13;UBERON:0004786,5.50e-10,13;UBERON:0003408,1.16e-09,24;UBERON:0002370,3.98e-09,23;UBERON:0000974,3.98e-09,23;UBERON:0004807,3.98e-09,23;UBERON:0005058,3.98e-09,23;UBERON:0003351,3.98e-09,23;UBERON:0009113,3.98e-09,23;UBERON:0003295,3.98e-09,23;UBERON:0009722,3.98e-09,23;UBERON:0005562,3.98e-09,23;UBERON:0007690,3.98e-09,23;UBERON:0000077,7.81e-09,35;UBERON:0006562,1.69e-08,24;UBERON:0001557,1.69e-08,24;UBERON:0001042,1.69e-08,24;UBERON:0008814,1.69e-08,24;UBERON:0009145,1.69e-08,24;UBERON:0001041,5.01e-08,80;UBERON:0001004,1.31e-07,42;UBERON:0003350,2.50e-07,9;UBERON:0004808,2.50e-07,9;UBERON:0001277,2.50e-07,9;UBERON:0000065,3.63e-07,41;UBERON:0000072,6.42e-07,27
|phase1_expression=0,6.2815573375085,10.9199817453489,9.0739263392049,5.50985302940982,8.05820505177071,8.41005506143892,31.2478442728615,3.66050677594334,7.49006484230379,11.9852577757853,7.57835510455696,24.4817043801624,17.4840804837995,3.99731714178795,3.44207954562704,0,19.2431920868525,21.526966076101,17.8243653755173,0.510259740906419,0,0,5.11975752938901,4.81759490241057,8.6134794617253,4.73838195774982,6.67960821326256,4.75058548640935,5.54466285471848,2.66076612786366,0,0,0,2.59966457776147,1.66234645358492,1.63335485009895,3.34825304589526,1.5626706890476,3.14114246384279,4.1176204162171,6.83045484958446,4.36959317728038,0,0,0,0,0,0,0,0,0,8.72469551500229,15.9579671242496,11.4271891708438,0.257259436035947,0,0,0,0,0,0,0,5.84934816232909,9.88866362566974,4.2628806896766,1.49800055259202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,3.24888208723835,3.13618820968135,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,1.02765491747154,31.8493596886021,0.890652834388949,0,0.304465478312141,0.230615497256059,0,0,0,1.73036477414062,1.15679485535929,3.5384422077995,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,0,0,4.85368404896324,0.359445373517761,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0.162241263067758,0,1.8661045591514,0,12.6265113531884,0,0,0,0,0,0,0.0937017245597288,3.62184719034622,0,0,0,0,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0.438599962275997,1.3173006917463,0.402619256281115,0,0,9.91256348951394,4.7601101999438,0,0,0.257734922644187,0.201683524623343,1.11189021922435,1.14135375667535,4.74529061544512,1.15289268306808,2.5133520880027,1.1937388322469,2.14460495831032,4.49409704327111,5.83572734661674,4.58024928485045,0,0,1.1270773567308,0.610953983535943,0.581857461502877,0.280543279561274,0.632365371242573,1.18088118383682,1.56998727841375,1.1105744752962,0.296452627087149,0.166845105716094,0.393117990226406,0,0.811440485554012,1.20588579876208,1.78238096246994,1.43848068725405,0.324270453550071,1.09824565275233,1.43768206527355,1.48856379067401,3.12037673114561,2.77836765741823,2.15276896226295,0.964887042726734,3.32555742299888,0.37898282354097,0.162964976442026,0,0,0,1.19021820443007,0.390267295715598,1.57635144106191,1.55025282754142,1.2756381492599,2.29408640602033,2.59027472798843,2.4590339958857,18.0949540727127,10.8781136763742,6.39293554924747,4.13905119457099,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0.659880491890142,1.32745138339963,0.242780636154981,0,0.754420319023592,0,0.922305443831782,0.775284879504663,0.363533729477506,0,1.26414703174326,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0.98931751764888,0,0.422190474497091,0.238744688006273,0.164140899745061,2.91480836629851,0,11.2774781326583,1.44470807574256,1.66675074632741,2.26042148405629,3.55404992074665,8.69357058184786,0.509935289981566,0.419854356970974,0.552799895217695,0.954670618015114,0,0.203319467126849,0.432021363287205,0,0.655087691238533,0.134864346384821,0.495920734352016,0.785267825952089,5.70305882483889,3.72803587852155,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.13020438484395,0,0,0,6.00421129193539,1.01362607645082,0.205421914329655,0.51968329191118,2.14832034800978,2.78153896693771,5.28859977887863,3.54454865218985,4.74542314756294,4.41999478598999,4.63800451629466,5.26272555994663,5.96513418170043,7.94762934834669,0.680191150845634,0.443971906748129,0.358855426437903,1.51096154727671,0.386379188064381,0.563047426353546,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0,0.564656282491984,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0.927471342481686
|phase1_expression=0,6.2815573375085,10.9199817453489,9.0739263392049,5.50985302940982,8.05820505177071,8.41005506143892,31.2478442728615,3.66050677594334,7.49006484230379,11.9852577757853,7.57835510455696,24.4817043801624,17.4840804837995,3.99731714178795,3.44207954562704,0,19.2431920868525,21.526966076101,17.8243653755173,0.510259740906419,0,0,5.11975752938901,4.81759490241057,8.6134794617253,4.73838195774982,6.67960821326256,4.75058548640935,5.54466285471848,2.66076612786366,0,0,0,2.59966457776147,1.66234645358492,1.63335485009895,3.34825304589526,1.5626706890476,3.14114246384279,4.1176204162171,6.83045484958446,4.36959317728038,0,0,0,0,0,0,0,0,0,8.72469551500229,15.9579671242496,11.4271891708438,0.257259436035947,0,0,0,0,0,0,0,5.84934816232909,9.88866362566974,4.2628806896766,1.49800055259202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,3.24888208723835,3.13618820968135,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,1.02765491747154,31.8493596886021,0.890652834388949,0,0.304465478312141,0.230615497256059,0,0,0,1.73036477414062,1.15679485535929,3.5384422077995,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,0,0,4.85368404896324,0.359445373517761,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0.162241263067758,0,1.8661045591514,0,12.6265113531884,0,0,0,0,0,0,0.0937017245597288,3.62184719034622,0,0,0,0,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0.438599962275997,1.3173006917463,0.402619256281115,0,0,9.91256348951394,4.7601101999438,0,0,0.257734922644187,0.201683524623343,1.11189021922435,1.14135375667535,4.74529061544512,1.15289268306808,2.5133520880027,1.1937388322469,2.14460495831032,4.49409704327111,5.83572734661674,4.58024928485045,0,0,1.1270773567308,0.610953983535943,0.581857461502877,0.280543279561274,0.632365371242573,1.18088118383682,1.56998727841375,1.1105744752962,0.296452627087149,0.166845105716094,0.393117990226406,0,0.811440485554012,1.20588579876208,1.78238096246994,1.43848068725405,0.324270453550071,1.09824565275233,1.43768206527355,1.48856379067401,3.12037673114561,2.77836765741823,2.15276896226295,0.964887042726734,3.32555742299888,0.37898282354097,0.162964976442026,0,0,0,1.19021820443007,0.390267295715598,1.57635144106191,1.55025282754142,1.2756381492599,2.29408640602033,2.59027472798843,2.4590339958857,18.0949540727127,10.8781136763742,6.39293554924747,4.13905119457099,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0,0.659880491890142,1.32745138339963,0.242780636154981,0,0.754420319023592,0,0.922305443831782,0.775284879504663,0.363533729477506,0,1.26414703174326,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0.98931751764888,0,0.422190474497091,0.238744688006273,0.164140899745061,2.91480836629851,0,11.2774781326583,1.44470807574256,1.66675074632741,2.26042148405629,3.55404992074665,8.69357058184786,0.509935289981566,0.419854356970974,0.552799895217695,0.954670618015114,0,0.203319467126849,0.432021363287205,0,0.655087691238533,0.134864346384821,0.495920734352016,0.785267825952089,5.70305882483889,3.72803587852155,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.13020438484395,0,0,0,6.00421129193539,1.01362607645082,0.205421914329655,0.51968329191118,2.14832034800978,2.78153896693771,5.28859977887863,3.54454865218985,4.74542314756294,4.41999478598999,4.63800451629466,5.26272555994663,5.96513418170043,7.94762934834669,0.680191150845634,0.443971906748129,0.358855426437903,1.51096154727671,0.386379188064381,0.563047426353546,0.915758121336325,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0,0.564656282491984,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0.927471342481686
|short_description=p1@Zc3h12d
}}
}}

Latest revision as of 07:26, 26 September 2015

Short description:p1@Zc3h12d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zc3h12d_5end
Coexpression cluster:NA
Association with transcript: -15bp_to_ENSMUST00000039484, ENSMUST00000163689, NM_172785, uc007eiq.2_5end
EntrezGene:Zc3h12d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zc3h12d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.53
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H931.85
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G412.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I39.91
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G211.28
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F85.29
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system6.17e-20116
digestive tract6.17e-20116
primitive gut6.17e-20116
hemolymphoid system2.95e-1948
immune system2.95e-1948
endoderm-derived structure3.33e-19118
endoderm3.33e-19118
presumptive endoderm3.33e-19118
subdivision of digestive tract1.21e-18114
hematopoietic system6.53e-1745
blood island6.53e-1745
organ component layer5.17e-1324
intestine6.59e-1331
endo-epithelium1.12e-1269
hemopoietic organ2.55e-1229
immune organ2.55e-1229
gut epithelium3.45e-1255
gastrointestinal system1.40e-1147
mucosa2.39e-1115
unilaminar epithelium2.63e-1066
intestinal mucosa5.50e-1013
wall of intestine5.50e-1013
gastrointestinal system mucosa5.50e-1013
gland of gut1.16e-0924
thymus3.98e-0923
neck3.98e-0923
respiratory system epithelium3.98e-0923
hemolymphoid system gland3.98e-0923
pharyngeal epithelium3.98e-0923
thymic region3.98e-0923
pharyngeal gland3.98e-0923
entire pharyngeal arch endoderm3.98e-0923
thymus primordium3.98e-0923
early pharyngeal endoderm3.98e-0923
mixed endoderm/mesoderm-derived structure7.81e-0935
pharynx1.69e-0824
upper respiratory tract1.69e-0824
chordate pharynx1.69e-0824
pharyngeal arch system1.69e-0824
pharyngeal region of foregut1.69e-0824
foregut5.01e-0880
respiratory system1.31e-0742
epithelium of mucosa2.50e-079
gastrointestinal system epithelium2.50e-079
intestinal epithelium2.50e-079
respiratory tract3.63e-0741
segment of respiratory tract6.42e-0727
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:7552212..7552252,%2B&oldid=4240828"