FFCP PHASE1:Hg19::chr7:87856280..87856298,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:87856280..87856298,- to FFCP PHASE1:Hg19::chr7:87856280..87856298,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6717 | |EntrezGene=6717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11292 | |HGNC=11292 | ||
|TSSclassifier=strong | |||
|UniProt=B4DKK2,C9J0K6 | |UniProt=B4DKK2,C9J0K6 | ||
|association_with_transcript=0bp_to_ENST00000431660,ENST00000490437_5end | |||
|cluster_id=chr7:87856280..87856298,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_2_at_SRI_5end | |||
|id=chr7:87856280..87856298,- | |||
|ontology_enrichment_celltype=CL:0000066!2.34e-12!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.23e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.00e-16;29!UBERON:0006595;5.72e-08;86 | |||
|ontology_enrichment_disease=DOID:305!5.56e-21!106;DOID:0050687!1.47e-13!143;DOID:299!1.69e-07!25;DOID:1749!8.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.95e-13;25!DOID:1749;6.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.03e-28,106;DOID:0050687,6.96e-20,143;DOID:299,4.53e-13,25;DOID:162,1.15e-09,235;DOID:14566,2.90e-09,239;DOID:1749,6.34e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.56e-19!169;UBERON:0000925!1.56e-19!169;UBERON:0006595!1.56e-19!169;UBERON:0004921!2.41e-19!129;UBERON:0004185!2.41e-19!129;UBERON:0001007!1.16e-18!155;UBERON:0001555!1.16e-18!155;UBERON:0007026!1.16e-18!155;UBERON:0000077!5.37e-15!130;UBERON:0001737!1.37e-12!9;UBERON:0003104!1.08e-11!238;UBERON:0009142!1.08e-11!238;UBERON:0001041!4.25e-11!98;UBERON:0008947!2.70e-09!38;UBERON:0003258!2.70e-09!38;UBERON:0005409!2.93e-09!35;UBERON:0000481!3.13e-09!347;UBERON:0000065!5.10e-09!53;UBERON:0000160!1.82e-08!27;UBERON:0000926!2.47e-08!448;UBERON:0004120!2.47e-08!448;UBERON:0006603!2.47e-08!448;UBERON:0001004!2.72e-08!72;UBERON:0005177!3.67e-08!107;UBERON:0002294!4.38e-08!7;UBERON:0001173!4.38e-08!7;UBERON:0004912!4.38e-08!7;UBERON:0001557!9.39e-08!19;UBERON:0000062!1.19e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.35e-26;9!UBERON:0001557;1.35e-26;9!UBERON:0005409;2.35e-16;22!UBERON:0000160;2.88e-15;17!UBERON:0000072;8.06e-11;37!UBERON:0002108;3.25e-10;4!UBERON:0002294;3.93e-10;7!UBERON:0001173;3.93e-10;7!UBERON:0000059;1.34e-09;11!UBERON:0000065;3.36e-09;44!UBERON:0004921;4.14e-09;33!UBERON:0011135;1.15e-08;5!UBERON:0002216;1.15e-08;5!UBERON:0011134;1.15e-08;5!UBERON:0002209;1.15e-08;5!UBERON:0002213;1.15e-08;5!UBERON:0007844;1.15e-08;5!UBERON:0011138;1.15e-08;5!UBERON:0001130;1.15e-08;5!UBERON:0001066;1.15e-08;5!UBERON:0001468;1.15e-08;5!UBERON:0001004;1.13e-07;65!UBERON:0002423;1.84e-07;25!UBERON:0002394;2.97e-07;4!UBERON:0003928;2.97e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.34e-26,9;UBERON:0004921,1.93e-22,118;UBERON:0001007,3.63e-20,145;UBERON:0001555,3.63e-20,145;UBERON:0007026,3.63e-20,145;UBERON:0004119,1.89e-18,160;UBERON:0000925,1.89e-18,160;UBERON:0006595,1.89e-18,160;UBERON:0000160,2.86e-15,17;UBERON:0001557,1.99e-14,19;UBERON:0005409,3.83e-14,25;UBERON:0001041,4.03e-14,87;UBERON:0008947,1.16e-13,38;UBERON:0003258,1.16e-13,38;UBERON:0011216,5.53e-11,223;UBERON:0000072,1.89e-10,47;UBERON:0002108,3.25e-10,4;UBERON:0000065,5.76e-10,54;UBERON:0000059,1.33e-09,11;UBERON:0011135,8.58e-09,5;UBERON:0002216,8.58e-09,5;UBERON:0011134,8.58e-09,5;UBERON:0002209,8.58e-09,5;UBERON:0002213,8.58e-09,5;UBERON:0005856,8.58e-09,5;UBERON:0005866,8.58e-09,5;UBERON:0005863,8.58e-09,5;UBERON:0007844,8.58e-09,5;UBERON:0011138,8.58e-09,5;UBERON:0001130,8.58e-09,5;UBERON:0001066,8.58e-09,5;UBERON:0001468,8.58e-09,5;UBERON:0002294,8.98e-08,9;UBERON:0001173,8.98e-08,9;UBERON:0004912,8.98e-08,9;UBERON:0009497,1.65e-07,25;UBERON:0000015,1.65e-07,25;UBERON:0002423,1.65e-07,25;UBERON:0006235,1.65e-07,25;UBERON:0004161,1.65e-07,25;UBERON:0001004,3.44e-07,74;UBERON:0009856,3.50e-07,26 | |||
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| ||
|short_description=p2@SRI | |||
}} | }} |
Latest revision as of 21:55, 19 September 2015
Short description: | p2@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRI_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000431660, ENST00000490437_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | B4DKK2C9J0K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.23e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.03e-28 | 106 |
cell type cancer | 6.96e-20 | 143 |
adenocarcinoma | 4.53e-13 | 25 |
cancer | 1.15e-09 | 235 |
disease of cellular proliferation | 2.90e-09 | 239 |
squamous cell carcinoma | 6.34e-07 | 14 |