FFCP PHASE1:Hg19::chr1:22163333..22163340,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:22163333..22163340,- to FFCP PHASE1:Hg19::chr1:22163333..22163340,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3339 | |EntrezGene=3339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5273 | |HGNC=5273 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_ENST00000471322_5end | |||
|cluster_id=chr1:22163333..22163340,- | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_6_at_HSPG2_5end | |||
|id=chr1:22163333..22163340,- | |||
|ontology_enrichment_celltype=CL:0002078!2.65e-16!44;CL:0002139!3.48e-16!24;CL:0000222!1.95e-15!119;CL:0000115!7.23e-15!35;CL:0000071!6.46e-14!18;CL:0002546!6.46e-14!18;CL:0002321!4.33e-12!248;CL:0000220!5.00e-12!246;CL:0000213!1.20e-11!57;CL:0000215!1.20e-11!57;CL:0000055!2.03e-09!180;CL:0002371!2.15e-09!591;CL:1000413!7.88e-09!9;CL:0000144!2.89e-08!625;CL:0002681!2.67e-07!13;CL:0002584!2.67e-07!13;CL:0000548!3.63e-07!679;CL:0000004!3.63e-07!679;CL:0000255!3.63e-07!679;CL:1000612!4.50e-07!7;CL:1000746!4.50e-07!7;CL:0000012!7.32e-07!682;CL:0000066!8.89e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.43e-23;36!CL:0002139;1.16e-20;24!CL:0000071;7.46e-20;18!CL:0002078;1.71e-16;45!CL:1000413;4.62e-15;9!CL:1000746;4.40e-13;7!CL:1000612;4.40e-13;7!CL:0002188;3.03e-12;5!CL:0002580;1.16e-11;3!CL:0002544;1.63e-10;6!CL:0000213;1.77e-10;58!CL:0000215;1.77e-10;58!CL:0000136;1.03e-09;13!CL:0002545;1.38e-08;2!CL:0002617;1.69e-08;2!CL:0002681;1.71e-07;12!CL:0002584;1.71e-07;12!CL:0002334;2.61e-07;12!CL:1000497;3.47e-07;17!CL:0002518;3.47e-07;17!CL:0002595;7.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.25e-26,36;CL:0002078,5.37e-23,45;CL:0002139,7.27e-21,24;CL:0000071,5.16e-20,18;CL:0002546,5.16e-20,18;CL:0000213,8.16e-17,58;CL:0000215,8.16e-17,58;CL:1000413,2.86e-15,9;CL:1000746,4.67e-13,7;CL:1000612,4.67e-13,7;CL:0000222,6.95e-13,121;CL:0002188,4.27e-12,5;CL:0002580,2.50e-11,3;CL:0000136,5.39e-11,15;CL:0002544,1.12e-10,6;CL:0002545,7.29e-09,2;CL:0002617,2.51e-08,2;CL:0002681,1.77e-07,12;CL:0002584,1.77e-07,12;CL:0002334,3.32e-07,12;CL:1000497,3.67e-07,17;CL:0002518,3.67e-07,17;CL:0002595,6.97e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;7.46e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.82e-17!69;UBERON:0001981!1.17e-16!60;UBERON:0007500!1.17e-16!60;UBERON:0004537!1.17e-16!60;UBERON:0006965!1.17e-16!60;UBERON:0004872!1.69e-15!84;UBERON:0002049!6.57e-15!79;UBERON:0007798!6.57e-15!79;UBERON:0001986!6.46e-14!18;UBERON:0004638!6.46e-14!18;UBERON:0004852!6.46e-14!18;UBERON:0003914!1.41e-13!118;UBERON:0001637!8.69e-12!42;UBERON:0003509!8.69e-12!42;UBERON:0004572!8.69e-12!42;UBERON:0006914!1.38e-11!25;UBERON:0000487!3.53e-11!22;UBERON:0001009!1.76e-10!113;UBERON:0004573!4.09e-10!33;UBERON:0004571!4.09e-10!33;UBERON:0004535!1.09e-09!110;UBERON:0003915!7.88e-09!9;UBERON:0004700!7.88e-09!9;UBERON:0001917!7.88e-09!9;UBERON:0000947!4.81e-08!21;UBERON:0010191!4.81e-08!21;UBERON:0000468!1.70e-07!659;UBERON:0001225!2.67e-07!13;UBERON:0008987!2.67e-07!13;UBERON:0000353!3.25e-07!17;UBERON:0000074!4.50e-07!7;UBERON:0001229!4.50e-07!7;UBERON:0001230!4.50e-07!7;UBERON:0005749!4.50e-07!7;UBERON:0004199!4.50e-07!7;UBERON:0004209!4.50e-07!7;UBERON:0004198!4.50e-07!7;UBERON:0000490!5.21e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.46e-20;18!UBERON:0001986;7.46e-20;18!UBERON:0004852;7.46e-20;18!UBERON:0006914;1.76e-16;25!UBERON:0000487;7.50e-16;22!UBERON:0003915;4.62e-15;9!UBERON:0004700;4.62e-15;9!UBERON:0001917;4.62e-15;9!UBERON:0000074;4.40e-13;7!UBERON:0001229;4.40e-13;7!UBERON:0001637;4.86e-11;42!UBERON:0003509;4.86e-11;42!UBERON:0004572;4.86e-11;42!UBERON:0003914;2.82e-10;74!UBERON:0004573;3.14e-10;33!UBERON:0004571;3.14e-10;33!UBERON:0007500;7.61e-10;56!UBERON:0001981;7.61e-10;56!UBERON:0004537;7.61e-10;56!UBERON:0000490;2.05e-09;33!UBERON:0000310;4.59e-09;10!UBERON:0001013;7.50e-09;14!UBERON:0005800;1.38e-08;2!UBERON:0001515;1.38e-08;2!UBERON:0000353;3.11e-08;15!UBERON:0003513;3.14e-08;7!UBERON:0001443;3.29e-08;11!UBERON:0005406;5.18e-08;2!UBERON:0000055;7.21e-08;65!UBERON:0000947;1.03e-07;21!UBERON:0010191;1.03e-07;21!UBERON:0001225;1.71e-07;12!UBERON:0008987;1.71e-07;12!UBERON:0002049;2.23e-07;75!UBERON:0007798;2.23e-07;75!UBERON:0003834;7.01e-07;5!UBERON:0001533;7.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.16e-20,18;UBERON:0001986,5.16e-20,18;UBERON:0004852,5.16e-20,18;UBERON:0000055,4.65e-17,68;UBERON:0006914,1.32e-16,25;UBERON:0007500,3.54e-16,59;UBERON:0001981,3.54e-16,59;UBERON:0004537,3.54e-16,59;UBERON:0006965,3.54e-16,59;UBERON:0000487,5.58e-16,22;UBERON:0003915,2.86e-15,9;UBERON:0004700,2.86e-15,9;UBERON:0001917,2.86e-15,9;UBERON:0002049,3.12e-14,78;UBERON:0007798,3.12e-14,78;UBERON:0010532,4.67e-13,7;UBERON:0000074,4.67e-13,7;UBERON:0001229,4.67e-13,7;UBERON:0001230,4.67e-13,7;UBERON:0003220,4.67e-13,7;UBERON:0005749,4.67e-13,7;UBERON:0004199,4.67e-13,7;UBERON:0004209,4.67e-13,7;UBERON:0004198,4.67e-13,7;UBERON:0003914,2.88e-12,117;UBERON:0001637,4.96e-12,42;UBERON:0003509,4.96e-12,42;UBERON:0004572,4.96e-12,42;UBERON:0004872,1.32e-11,83;UBERON:0005103,2.19e-11,8;UBERON:0000083,2.19e-11,8;UBERON:0009201,2.19e-11,8;UBERON:0006553,2.19e-11,8;UBERON:0003074,2.19e-11,8;UBERON:0003060,2.19e-11,8;UBERON:0004573,3.35e-11,33;UBERON:0004571,3.35e-11,33;UBERON:0009569,3.87e-10,112;UBERON:0000080,4.38e-10,9;UBERON:0002120,4.38e-10,9;UBERON:0004875,4.38e-10,9;UBERON:0005721,4.38e-10,9;UBERON:0005754,4.38e-10,9;UBERON:0007297,4.38e-10,9;UBERON:0001013,6.67e-09,14;UBERON:0005800,7.29e-09,2;UBERON:0001515,7.29e-09,2;UBERON:0000310,7.96e-09,10;UBERON:0004535,7.97e-09,109;UBERON:0001009,1.82e-08,112;UBERON:0005406,2.25e-08,2;UBERON:0003513,2.92e-08,7;UBERON:0000353,3.06e-08,15;UBERON:0004876,3.44e-08,11;UBERON:0001443,5.39e-08,11;UBERON:0000947,8.13e-08,21;UBERON:0010191,8.13e-08,21;UBERON:0001225,1.77e-07,12;UBERON:0008987,1.77e-07,12;UBERON:0003887,1.77e-07,12;UBERON:0003834,6.97e-07,5;UBERON:0001533,6.97e-07,5 | |||
|phase1_expression=1.09007027562334,3.8538094300377,0.986680828671798,2.00146596706261,2.23480547213644,1.74467704820074,0,0,1.04474251279935,0.245733936501509,1.39560233594486,0.655324116390517,0.527533956456907,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.408001382488506,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,2.31754430337318,0,2.91980922181582,0.0945348171640679,0,0.263504357079378,0,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,2.08284300964557,3.95715559346807,2.93649605346934,6.60283300656162,0.626984899610432,1.55050055501597,2.13459757612026,0.33472061276467,3.22263453687318,0.760272105718513,8.05404789908959,1.83831540172934,8.91156142669936,0.982297011124877,0.673588117878509,0.675668882899933,3.06633274931766,0,2.74802615895611,0,0,0.436094052142534,0.993943903390637,0.759783069987479,0.662045904066094,1.43418310374407,1.41867352879343,0,0,0.74000264525148,0,0.808264032418128,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.989067717114227,0,0,0.168336113954066,0,0,0,0.30648779579902,0.45071417671979,0.340296549480063,1.61450672119976,0.213557388818567,0.211931901159562,0.600182192168805,0,0.772921620136887,0.18611685633159,0.168776332241266,0.292311015483596,0.757301322732344,0.368199594569197,0.323292113637624,1.42003837006646,0.201504196455281,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.577465791044295,0,0.951270761172991,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0.129271715757778,7.15312891703765,2.535908257668,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0.65147236858747,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.579125226670317,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.24782516918484,0.892144943985809,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,1.24053903909388,1.07423381301644,3.92924132206303,0.512556597022804,0,1.28683136914886,1.48418066444991,0.308419387605311,0.355123450626254,0,0,0.581051892299796,0.120859449591622,0.601519410909855,0.184161977871793,0.114814448164607,0,0.524497659837696,0.451199612907412,0,0,0,0,2.27466768141793,0.680374821106063,1.0795795805107,10.7959076883203,0.541892875087706,1.50506932156456,0,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0,0.435050081742686,0.255679882248303,0.356128142586949,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,0.974853958525138,1.05650146756755,0,0.141405431953713,0,0,1.99031692572366,1.31535265576129,1.15755106853338,0,0,0.92947049429925,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0.422215270595328,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0.108647371922008,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0,0.34945333648406,0.343972064943233,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0.160317640503067,0,0.599428828746391,0.144090417154106,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0.201550417460179,1.08089965062721,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0.542999601753713,0.864221491201268,1.30634944043764,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12498040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| ||
|short_description=p6@HSPG2 | |||
}} | }} |
Latest revision as of 18:30, 15 September 2015
Short description: | p6@HSPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HSPG2_5end |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | 69bp_to_ENST00000471322_5end |
EntrezGene: | HSPG2 |
HGNC: | 5273 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.25e-26 | 36 |
meso-epithelial cell | 5.37e-23 | 45 |
endothelial cell of vascular tree | 7.27e-21 | 24 |
blood vessel endothelial cell | 5.16e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.16e-20 | 18 |
lining cell | 8.16e-17 | 58 |
barrier cell | 8.16e-17 | 58 |
endothelial cell of artery | 2.86e-15 | 9 |
glomerular cell | 4.67e-13 | 7 |
kidney corpuscule cell | 4.67e-13 | 7 |
mesodermal cell | 6.95e-13 | 121 |
glomerular endothelial cell | 4.27e-12 | 5 |
preadipocyte of the breast | 2.50e-11 | 3 |
fat cell | 5.39e-11 | 15 |
aortic endothelial cell | 1.12e-10 | 6 |
thoracic aorta endothelial cell | 7.29e-09 | 2 |
adipocyte of breast | 2.51e-08 | 2 |
kidney cortical cell | 1.77e-07 | 12 |
renal cortical epithelial cell | 1.77e-07 | 12 |
preadipocyte | 3.32e-07 | 12 |
kidney cell | 3.67e-07 | 17 |
kidney epithelial cell | 3.67e-07 | 17 |
smooth muscle cell of the subclavian artery | 6.97e-07 | 5 |