FFCP PHASE1:Hg19::chr19:4639579..4639589,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4639579..4639589,+ to FFCP PHASE1:Hg19::chr19:4639579..4639589,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126282 | |EntrezGene=126282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28279 | |HGNC=28279 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_uc002max.2_5end | |||
|cluster_id=chr19:4639579..4639589,+ | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_2_at_TNFAIP8L1_5end | |||
|id=chr19:4639579..4639589,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.93e-26!35;CL:0002139!4.39e-25!24;CL:0002078!1.43e-23!44;CL:0000213!1.25e-21!57;CL:0000215!1.25e-21!57;CL:0000071!7.69e-19!18;CL:0002546!7.69e-19!18;CL:0000076!4.44e-11!62;CL:1000413!4.60e-10!9;CL:0000222!7.98e-10!119;CL:0005020!8.46e-08!6;CL:0002138!8.46e-08!6;CL:0005022!8.46e-08!6;CL:0002544!2.88e-07!6;CL:0002543!3.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.89e-91;36!CL:0002139;1.44e-89;24!CL:0000071;1.50e-52;18!CL:0002078;2.50e-51;45!CL:0002138;9.46e-42;6!CL:0000213;2.51e-40;58!CL:0000215;2.51e-40;58!CL:0002188;6.94e-23;5!CL:0002144;2.14e-22;3!CL:1000413;1.37e-18;9!CL:0002543;2.53e-18;6!CL:0002544;3.10e-18;6!CL:1000746;2.06e-16;7!CL:1000612;2.06e-16;7!CL:0002262;1.71e-15;2!CL:1000398;1.71e-15;2!CL:0000076;4.67e-10;63!CL:0002618;6.81e-10;3!CL:0002681;1.23e-09;12!CL:0002584;1.23e-09;12!CL:0000511;4.89e-08;1!CL:0002625;4.89e-08;1!CL:0000216;4.89e-08;1!CL:1000449;9.95e-08;15!CL:1000497;7.91e-07;17!CL:0002518;7.91e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.99e-107,36;CL:0002139,2.32e-89,24;CL:0002078,1.45e-84,45;CL:0000213,2.27e-70,58;CL:0000215,2.27e-70,58;CL:0000071,2.08e-52,18;CL:0002546,2.08e-52,18;CL:0005020,1.09e-41,6;CL:0002138,1.09e-41,6;CL:0005022,1.09e-41,6;CL:0000222,1.76e-31,121;CL:0002188,4.96e-23,5;CL:0002144,1.85e-22,3;CL:1000413,1.35e-18,9;CL:0002544,2.71e-18,6;CL:0002543,3.90e-18,6;CL:1000746,1.63e-16,7;CL:1000612,1.63e-16,7;CL:0000076,7.13e-16,63;CL:0002262,1.77e-15,2;CL:1000398,1.77e-15,2;CL:0002321,9.13e-13,250;CL:0000066,1.07e-12,253;CL:0002618,9.36e-10,3;CL:0002681,1.08e-09,12;CL:0002584,1.08e-09,12;CL:0000511,4.11e-08,1;CL:0002625,4.11e-08,1;CL:0000216,4.11e-08,1;CL:1000449,8.95e-08,15;CL:1000497,7.21e-07,17;CL:0002518,7.21e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.50e-52;18!CL:0005022;9.46e-42;6!CL:0000222;6.28e-15;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.69e-19!18;UBERON:0004638!7.69e-19!18;UBERON:0004852!7.69e-19!18;UBERON:0000487!1.13e-17!22;UBERON:0006914!1.67e-17!25;UBERON:0003915!4.60e-10!9;UBERON:0004700!4.60e-10!9;UBERON:0001917!4.60e-10!9;UBERON:0002049!4.10e-09!79;UBERON:0007798!4.10e-09!79;UBERON:0000055!1.48e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.50e-52;18!UBERON:0001986;1.50e-52;18!UBERON:0004852;1.50e-52;18!UBERON:0000487;5.21e-50;22!UBERON:0006914;9.98e-44;25!UBERON:0001473;3.21e-31;8!UBERON:0004536;3.21e-31;8!UBERON:0006558;3.21e-31;8!UBERON:0000490;8.90e-30;33!UBERON:0002465;6.80e-25;10!UBERON:0000055;3.76e-23;65!UBERON:0010523;2.14e-22;3!UBERON:0001915;2.14e-22;3!UBERON:0001982;2.14e-22;3!UBERON:0003915;1.37e-18;9!UBERON:0004700;1.37e-18;9!UBERON:0001917;1.37e-18;9!UBERON:0000353;1.26e-16;15!UBERON:0000074;2.06e-16;7!UBERON:0001229;2.06e-16;7!UBERON:0001281;1.71e-15;2!UBERON:0003497;1.71e-15;2!UBERON:0003909;1.71e-15;2!UBERON:0003835;1.71e-15;2!UBERON:0002049;7.46e-14;75!UBERON:0007798;7.46e-14;75!UBERON:0003914;1.19e-13;74!UBERON:0007500;2.74e-13;56!UBERON:0001981;2.74e-13;56!UBERON:0004537;2.74e-13;56!UBERON:0001638;2.75e-12;9!UBERON:0003920;2.75e-12;9!UBERON:0004582;2.75e-12;9!UBERON:0004535;8.48e-11;109!UBERON:0001280;1.25e-10;3!UBERON:0004647;1.25e-10;3!UBERON:0000025;4.86e-10;93!UBERON:0001225;1.23e-09;12!UBERON:0008987;1.23e-09;12!UBERON:0002405;6.69e-09;27!UBERON:0001009;1.17e-08;112!UBERON:0001136;4.89e-08;1!UBERON:0001343;4.89e-08;1!UBERON:0004910;4.89e-08;1!UBERON:0004813;4.89e-08;1!UBERON:0001851;9.95e-08;15!UBERON:0006555;9.95e-08;15!UBERON:0004819;9.95e-08;15!UBERON:0001285;9.95e-08;15!UBERON:0007684;9.95e-08;15!UBERON:0004111;8.74e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.08e-52,18;UBERON:0001986,2.08e-52,18;UBERON:0004852,2.08e-52,18;UBERON:0000487,6.27e-50,22;UBERON:0006914,1.18e-43,25;UBERON:0000055,7.00e-37,68;UBERON:0002049,1.15e-31,78;UBERON:0007798,1.15e-31,78;UBERON:0001473,3.57e-31,8;UBERON:0004536,3.57e-31,8;UBERON:0006558,3.57e-31,8;UBERON:0002465,7.40e-25,10;UBERON:0010523,1.85e-22,3;UBERON:0001915,1.85e-22,3;UBERON:0001982,1.85e-22,3;UBERON:0004535,1.44e-21,109;UBERON:0001009,6.90e-21,112;UBERON:0007500,3.46e-20,59;UBERON:0001981,3.46e-20,59;UBERON:0004537,3.46e-20,59;UBERON:0006965,3.46e-20,59;UBERON:0003915,1.35e-18,9;UBERON:0004700,1.35e-18,9;UBERON:0001917,1.35e-18,9;UBERON:0000058,1.73e-17,19;UBERON:0000353,1.09e-16,15;UBERON:0010532,1.63e-16,7;UBERON:0000074,1.63e-16,7;UBERON:0001229,1.63e-16,7;UBERON:0001230,1.63e-16,7;UBERON:0003220,1.63e-16,7;UBERON:0005749,1.63e-16,7;UBERON:0004199,1.63e-16,7;UBERON:0004209,1.63e-16,7;UBERON:0004198,1.63e-16,7;UBERON:0004876,6.86e-16,11;UBERON:0004872,9.90e-16,83;UBERON:0003914,1.11e-15,117;UBERON:0001281,1.77e-15,2;UBERON:0003497,1.77e-15,2;UBERON:0003909,1.77e-15,2;UBERON:0003835,1.77e-15,2;UBERON:0004111,5.75e-15,240;UBERON:0005103,1.79e-14,8;UBERON:0000083,1.79e-14,8;UBERON:0009201,1.79e-14,8;UBERON:0006553,1.79e-14,8;UBERON:0003074,1.79e-14,8;UBERON:0003060,1.79e-14,8;UBERON:0000080,6.97e-13,9;UBERON:0002120,6.97e-13,9;UBERON:0004875,6.97e-13,9;UBERON:0005721,6.97e-13,9;UBERON:0005754,6.97e-13,9;UBERON:0007297,6.97e-13,9;UBERON:0001638,3.65e-12,9;UBERON:0003920,3.65e-12,9;UBERON:0004582,3.65e-12,9;UBERON:0001280,1.28e-10,3;UBERON:0004647,1.28e-10,3;UBERON:0005171,1.28e-10,3;UBERON:0001225,1.08e-09,12;UBERON:0008987,1.08e-09,12;UBERON:0003887,1.08e-09,12;UBERON:0003081,1.09e-09,203;UBERON:0000025,2.87e-09,192;UBERON:0001136,4.11e-08,1;UBERON:0001343,4.11e-08,1;UBERON:0004910,4.11e-08,1;UBERON:0005154,4.11e-08,1;UBERON:0005295,4.11e-08,1;UBERON:0004813,4.11e-08,1;UBERON:0005297,4.11e-08,1;UBERON:0005294,4.11e-08,1;UBERON:0010141,4.11e-08,1;UBERON:0005891,4.11e-08,1;UBERON:0001851,8.95e-08,15;UBERON:0004211,8.95e-08,15;UBERON:0009773,8.95e-08,15;UBERON:0001231,8.95e-08,15;UBERON:0001285,8.95e-08,15;UBERON:0007684,8.95e-08,15;UBERON:0004208,8.95e-08,15;UBERON:0000490,1.45e-07,148;UBERON:0006555,2.71e-07,16;UBERON:0004819,2.71e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.975865597581014,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0.232429036905685,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,1.59009925893364,2.58070378531837,1.04142150482278,0.56530794192401,0.838998872419812,0.825354125820202,1.04497483268405,2.06733407335463,2.13459757612026,3.68192674041137,10.876391561947,3.80136052859256,10.9827925896676,0.735326160691737,1.62028389576352,1.07159673940896,0.44905874525234,1.0135033243499,3.06633274931766,0.949265659568129,1.09921046358244,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.67355336034844,0.653847612453835,0.908144565869588,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,5.60967095213783,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,4.04226053731007,4.1668696131895,3.23432058798817,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.352193736052904,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0,6.8240030442538,3.57196781080683,1.94324324491925,9.25363516141736,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0.0711418433484141,0,0,0.383010740264733,0,0,0,0.456469358066384,0,0,0.50787533340481,0,0,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0.890894042497916,0,0,0,0,0,0.63337622438398,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0,0,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0.171986032471617,0,0,0,0.290967049465258,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.458320848023367,0,0.399358000997982,0,0,0.134366944973453,0,0,0.315132729228895,0.247247575143499,0.404421263125109,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0.124980407962107,0.303298235083296,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0.323474434190045,0,0,0.169732529954025,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0.1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| ||
|short_description=p2@TNFAIP8L1 | |||
}} | }} |
Latest revision as of 19:35, 18 September 2015
Short description: | p2@TNFAIP8L1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFAIP8L1_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 49bp_to_uc002max.2_5end |
EntrezGene: | TNFAIP8L1 |
HGNC: | 28279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data