FFCP PHASE1:Hg19::chr17:27052892..27052921,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:27052892..27052921,+ to FFCP PHASE1:Hg19::chr17:27052892..27052921,+: NSchange) |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:27052892..27052921,+ | |||
|description=CAGE_peak_at_chr17:27052892..27052921,+ | |||
|id=chr17:27052892..27052921,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.87e-23!254;CL:0000548!2.51e-10!679;CL:0000004!2.51e-10!679;CL:0000255!2.51e-10!679;CL:0000012!7.25e-10!682;CL:0002321!1.74e-07!248;CL:0000220!4.21e-07!246;CL:0002159!7.20e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.01e-11;10!CL:1000494;1.01e-11;10!CL:0002681;1.31e-09;12!CL:0002584;1.31e-09;12!CL:1000449;2.13e-09;15!CL:1000497;4.65e-08;17!CL:0002518;4.65e-08;17!CL:0002159;2.26e-07;14!CL:0000182;2.74e-07;12!CL:0000362;3.28e-07;9!CL:0000239;9.14e-07;3!CL:1000615;9.14e-07;3!CL:0002306;9.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.47e-19,253;CL:1000507,6.17e-12,10;CL:1000494,6.17e-12,10;CL:0002681,8.37e-10,12;CL:0002584,8.37e-10,12;CL:1000449,1.48e-09,15;CL:1000497,3.40e-08,17;CL:0002518,3.40e-08,17;CL:0000182,1.80e-07,12;CL:0002159,2.69e-07,14;CL:0000362,3.78e-07,9;CL:0000239,5.61e-07,3;CL:1000615,5.61e-07,3;CL:0002306,5.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.61e-16!106;DOID:0050687!1.24e-13!143;DOID:162!2.39e-08!235;DOID:14566!3.08e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.66e-09,106;DOID:0050687,1.79e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.47e-12!169;UBERON:0000925!9.47e-12!169;UBERON:0006595!9.47e-12!169;UBERON:0000481!1.01e-11!347;UBERON:0003104!2.80e-11!238;UBERON:0009142!2.80e-11!238;UBERON:0008947!1.81e-10!38;UBERON:0003258!1.81e-10!38;UBERON:0000077!1.91e-10!130;UBERON:0000475!2.32e-10!365;UBERON:0001007!6.95e-10!155;UBERON:0001555!6.95e-10!155;UBERON:0007026!6.95e-10!155;UBERON:0009569!9.73e-10!113;UBERON:0001041!5.85e-09!98;UBERON:0001737!6.86e-09!9;UBERON:0002100!7.63e-09!216;UBERON:0005177!7.87e-09!107;UBERON:0000063!9.74e-09!97;UBERON:0000119!1.27e-08!312;UBERON:0004921!1.59e-08!129;UBERON:0004185!1.59e-08!129;UBERON:0000483!1.65e-08!309;UBERON:0000064!2.11e-08!219;UBERON:0001048!1.08e-07!168;UBERON:0000072!1.42e-07!46;UBERON:0000065!1.59e-07!53;UBERON:0005172!2.41e-07!55;UBERON:0005173!2.41e-07!55;UBERON:0005911!3.69e-07!82;UBERON:0002417!7.04e-07!61;UBERON:0000916!7.04e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.03e-19;9!UBERON:0001557;1.03e-19;9!UBERON:0004211;1.01e-11;10!UBERON:0009773;1.01e-11;10!UBERON:0001231;1.01e-11;10!UBERON:0004810;1.01e-11;10!UBERON:0002423;3.11e-10;25!UBERON:0001225;1.31e-09;12!UBERON:0008987;1.31e-09;12!UBERON:0006555;2.13e-09;15!UBERON:0004819;2.13e-09;15!UBERON:0001285;2.13e-09;15!UBERON:0007684;2.13e-09;15!UBERON:0002365;2.98e-09;31!UBERON:0002330;2.98e-09;31!UBERON:0005172;3.47e-09;52!UBERON:0005173;3.47e-09;52!UBERON:0000072;1.91e-08;37!UBERON:0002107;2.01e-08;19!UBERON:0006925;2.01e-08;19!UBERON:0000065;6.25e-08;44!UBERON:0002113;8.64e-08;24!UBERON:0011143;8.64e-08;24!UBERON:0001851;2.31e-07;15!UBERON:0000353;2.31e-07;15!UBERON:0002417;2.34e-07;58!UBERON:0000916;2.34e-07;58!UBERON:0002203;3.29e-07;6!UBERON:0001768;3.29e-07;6!UBERON:0002200;3.29e-07;6!UBERON:0006554;5.67e-07;30!UBERON:0001008;5.67e-07;30!UBERON:0006853;9.14e-07;3!UBERON:0007685;9.14e-07;3!UBERON:0004134;9.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.08e-19,9;UBERON:0005172,4.74e-12,54;UBERON:0005173,4.74e-12,54;UBERON:0004810,6.17e-12,10;UBERON:0001041,4.50e-11,87;UBERON:0009569,9.00e-11,112;UBERON:0004119,2.64e-10,160;UBERON:0000925,2.64e-10,160;UBERON:0006595,2.64e-10,160;UBERON:0009497,2.93e-10,25;UBERON:0000015,2.93e-10,25;UBERON:0002423,2.93e-10,25;UBERON:0006235,2.93e-10,25;UBERON:0004161,2.93e-10,25;UBERON:0002417,3.06e-10,60;UBERON:0000916,3.06e-10,60;UBERON:0008835,4.55e-10,22;UBERON:0003894,4.55e-10,22;UBERON:0005177,7.64e-10,101;UBERON:0001225,8.37e-10,12;UBERON:0008987,8.37e-10,12;UBERON:0001048,8.60e-10,160;UBERON:0004921,1.15e-09,118;UBERON:0008947,1.18e-09,38;UBERON:0003258,1.18e-09,38;UBERON:0004211,1.48e-09,15;UBERON:0009773,1.48e-09,15;UBERON:0001231,1.48e-09,15;UBERON:0001285,1.48e-09,15;UBERON:0007684,1.48e-09,15;UBERON:0004208,1.48e-09,15;UBERON:0009854,1.67e-09,23;UBERON:0001007,2.02e-09,145;UBERON:0001555,2.02e-09,145;UBERON:0007026,2.02e-09,145;UBERON:0002365,2.35e-09,31;UBERON:0002330,2.35e-09,31;UBERON:0006555,7.85e-09,16;UBERON:0004819,7.85e-09,16;UBERON:0002107,1.36e-08,19;UBERON:0006925,1.36e-08,19;UBERON:0008836,1.36e-08,19;UBERON:0007499,1.63e-08,25;UBERON:0001557,4.06e-08,19;UBERON:0009856,4.43e-08,26;UBERON:0001851,1.64e-07,15;UBERON:0000353,1.64e-07,15;UBERON:0002203,1.88e-07,6;UBERON:0001768,1.88e-07,6;UBERON:0002200,1.88e-07,6;UBERON:0002100,2.57e-07,199;UBERON:0005085,3.48e-07,31;UBERON:0002113,4.70e-07,26;UBERON:0003918,4.70e-07,26;UBERON:0011143,4.70e-07,26;UBERON:0005095,4.70e-07,26;UBERON:0007687,4.70e-07,26;UBERON:0006853,5.61e-07,3;UBERON:0007685,5.61e-07,3;UBERON:0004134,5.61e-07,3;UBERON:0006554,8.75e-07,47 | |||
|phase1_expression=0,2.5692062866918,0,0,0.446961094427288,0,2.53299878168311,0.631719873426831,1.04474251279935,0,5.58240934377942,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.861847406537515,0.204000691244253,0.626909442956176,0.286235987131057,0.547497700291537,0.502170558379211,0.152826811495903,0.0821005894499457,0,0,0,0,0.919421224478927,0.6024118375565,1.10926203050036,0.0774672005803016,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,1.98523116044542,1.99556457716308,1.58102614247627,0.523916301990851,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0,0,0,2.18047026071267,0,0.25326102332916,0.662045904066094,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0.161872944368132,0.280901613404497,0.408308342509787,1.22834317311768,0.723280468230358,0,0,1.82032272387605,1.43723628363248,1.0100166837244,1.37630371859161,1.10825646193673,0.877955241761676,0,0,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0.504867548488229,0,0.323292113637624,0,0,0,0,0,0.573609190778008,0.365921118388786,1.19276791489337,0.464775771478074,0.725627385107593,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,6.7434876022711,7.24914167335837,4.57920956778616,4.74264082749294,5.44698610231015,8.30447166888838,8.08987848960986,6.47530834913642,7.69494313892781,0,0,1.2347220339942,0,1.26755034821831,1.96565443335525,2.36315962672562,0,2.82873408649161,0.514703430895577,2.96325770603289,0,2.01057944823262,0.740707561268237,0,0,0,0.463721619900307,0.117408694235822,0.288732895522148,0,0,2.37061319387782,3.43394464837949,0,0,0,0.93733833986777,0.839910640994298,0.567100388969546,0.268675568108545,2.03443756959773,0,0,0.176096868026452,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0.285826432630578,0.672786506072164,0,0.1466765716419,0.387815147273333,0,0.845302752556,0.797814349754612,0,1.54324424557285,0,0.266422179016099,3.28849385413739,0.542621605391443,1.64648067356154,0,1.42156779497018,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0.587403472388222,0,0,0.215714200818617,0.106727557803444,0.606255142892519,1.66435439510497,1.20956117331872,0,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0,0,1.03850885836724,0,1.32945394550784,0,0.0920809889358963,0,0,0,3.15839729035188,1.69433741629712,2.35304930753057,0,0.316654886678627,0,0,0,0,1.35473218771926,2.00675909541941,1.52925763827023,3.3243040357149,2.68649705666614,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.103041011647722,0.457847324091717,0,1.14853107599234,2.60024098414608,0,0,0.924291702687866,1.38153307253517,0.689182862422653,0.644521469209642,1.45016693914229,1.10794615640931,0.178064071293475,0,0,1.27612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.762520775695299,0.511795582622668,0.42793898803392,0,0,0.719489830333259,2.47083326762449,1.06031162111118,0.202182481573316,0,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0,1.15755106853338,1.31178950409327,0,0,0,0.430234056612155,0.491245205065606,0,1.06428319221179,0,0,1.13841952129715,1.04980416073495,0.577332676353072,2.01090682660736,1.08890984861323,0,2.58303223602738,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,2.02965735142199,0,0.245040215981032,0,0,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0,0,0.313359791546046,2.50634477090067,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.586164286206121,0,0,0,0,0,1.30998378285754,0,0.485442086998054,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0.615424027305347,0,1.07842021376792,0.537063524026827,0,0,0,0,0,0.278304294485554,0,0.520855522170466,10.3202799995511,0,0,0.254253650292766,0.236387681767936,1.37897349296586,0.291604613383254,0.173624994933292,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0,0,0.359030577639089,4.12860013303631,0,0,0,0,0,0.166211681900156,2.03036094555463,2.74487548044835,1.67821586975843,0.189753732724185,0.476809736941136,0.632994193584081,0.326465616318295,0.565412285735763,0.432777279484182,0,0.176915129006678,0,0.889563386041866,0.247127877893006,0.522109747527277,0.067401132980677,0,0,0.182454789215666,0.19566461893209,1.94224303627274,0,0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| ||
|short_description=p@chr17:27052892..27052921,+ | |||
}} | }} |
Latest revision as of 15:04, 25 July 2015
Short description: | p@chr17:27052892..27052921, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27052892..27052921, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.47e-19 | 253 |
kidney tubule cell | 6.17e-12 | 10 |
nephron tubule epithelial cell | 6.17e-12 | 10 |
kidney cortical cell | 8.37e-10 | 12 |
renal cortical epithelial cell | 8.37e-10 | 12 |
epithelial cell of nephron | 1.48e-09 | 15 |
kidney cell | 3.40e-08 | 17 |
kidney epithelial cell | 3.40e-08 | 17 |
hepatocyte | 1.80e-07 | 12 |
general ecto-epithelial cell | 2.69e-07 | 14 |
epidermal cell | 3.78e-07 | 9 |
brush border epithelial cell | 5.61e-07 | 3 |
kidney cortex tubule cell | 5.61e-07 | 3 |
epithelial cell of proximal tubule | 5.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.66e-09 | 106 |
cell type cancer | 1.79e-07 | 143 |